|
|
Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGCGAGAGTTGATCGCCGAGAAATTAAAATGGTTCAGACCCAACGGCGCTTCCGATTTCCGCCGTTGTGTTCTCGAATTAGATCATTCTGGTTTCCAACAACTGCAAATCAAAACCTCTGTTCCTGAAAAAAAAAATCTCCGTTCGATTCTGCAGAGCGACAACAGGCAGGTGGGTTTGAAATGGTCGCATCAAGTGGAAAGAAATTGTTAGTTCTTCATCTTCTCTCTCTTTTTCTTCCATTGGAGATCCAATTTTCTCGCGGGATAGCGTTTCTATATTTAGAAAATGGAAAATTTGTCTCTGCATTTTCTTCTTTCTTCTCGCGAAGTCTTTGAATATGGGTTCTCAAAAAAGCATGGAGACATACGTACGTTTGAATTCTGAATCTCTGATTGGTTTGAAACTCCGATCATCTCAGATTTTCACTCTTTGCACCGGTGACGGTGCTGATGGCCGGTGA mRNA sequence ATGCGAGAGTTGATCGCCGAGAAATTAAAATGGTTCAGACCCAACGGCGCTTCCGATTTCCGCCGTTGTGTTCTCGAATTAGATCATTCTGGTTTCCAACAACTGCAAATCAAAACCTCTGTTCCTGAAAAAAAAAATCTCCGTTCGATTCTGCAGAGCGACAACAGGCAGTCTTTGAATATGGGTTCTCAAAAAAGCATGGAGACATACGTACGTTTGAATTCTGAATCTCTGATTGGTTTGAAACTCCGATCATCTCAGATTTTCACTCTTTGCACCGGTGACGGTGCTGATGGCCGGTGA Coding sequence (CDS) ATGCGAGAGTTGATCGCCGAGAAATTAAAATGGTTCAGACCCAACGGCGCTTCCGATTTCCGCCGTTGTGTTCTCGAATTAGATCATTCTGGTTTCCAACAACTGCAAATCAAAACCTCTGTTCCTGAAAAAAAAAATCTCCGTTCGATTCTGCAGAGCGACAACAGGCAGTCTTTGAATATGGGTTCTCAAAAAAGCATGGAGACATACGTACGTTTGAATTCTGAATCTCTGATTGGTTTGAAACTCCGATCATCTCAGATTTTCACTCTTTGCACCGGTGACGGTGCTGATGGCCGGTGA Protein sequence MRELIAEKLKWFRPNGASDFRRCVLELDHSGFQQLQIKTSVPEKKNLRSILQSDNRQSLNMGSQKSMETYVRLNSESLIGLKLRSSQIFTLCTGDGADGR*
Homology
BLAST of CSPI03G39460 vs. ExPASy TrEMBL
Match: A0A0A0LC73 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G829050 PE=4 SV=1) HSP 1 Score: 200.3 bits (508), Expect = 3.9e-48 Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0
Query: 1 MRELIAEKLKWFRPNGASDFRRCVLELDHSGFQQLQIKTSVPEKKNLRSILQSDNRQSLN 60
MRELIAEKLKWFRPNGASDFRRCVLELDHSGFQQLQIKTSVPEKKNLRSILQSDNRQSLN
Sbjct: 1 MRELIAEKLKWFRPNGASDFRRCVLELDHSGFQQLQIKTSVPEKKNLRSILQSDNRQSLN 60
Query: 61 MGSQKSMETYVRLNSESLIGLKLRSSQIFTLCTGDGADGR 101
MGSQKSMETYVRLNSESLIGLKLRSSQIFTLCTGDGADGR
Sbjct: 61 MGSQKSMETYVRLNSESLIGLKLRSSQIFTLCTGDGADGR 100
BLAST of CSPI03G39460 vs. NCBI nr
Match: KAE8651237.1 (hypothetical protein Csa_002231 [Cucumis sativus]) HSP 1 Score: 117.9 bits (294), Expect = 5.2e-23 Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 0
Query: 1 MRELIAEKLKWFRPNGASDFRRCVLELDHSGFQQLQIKTSVPEKKNLRSILQSDNRQ 58
MRELIAEKLKWFRPNGASDFRRCVLELDHSGFQQLQIKTSVPEKKNLRSILQSDNRQ
Sbjct: 1 MRELIAEKLKWFRPNGASDFRRCVLELDHSGFQQLQIKTSVPEKKNLRSILQSDNRQ 57
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LC73 | 3.9e-48 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G829050 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KAE8651237.1 | 5.2e-23 | 100.00 | hypothetical protein Csa_002231 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
|
