CSPI03G39380 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G39380
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	YELLOW STRIPE like 7
Location	Chr3: 33866340 .. 33866651 (+)
RNA-Seq Expression	CSPI03G39380
Synteny	CSPI03G39380

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTCAAGGTTACAGGGTTTTCATTGCCATTGCTATGATACTTGGTGATGGTCTTTACCATGTATTCTTCATGCCTTTTCAAACATTCTACAGCTTAGCTAAGCAGAAGTTCAGCAATGAAAAATTGAAAATGTTGATTCATCATTCGAAGTTACTGACTACGATGCTCAACGGGGAACTGATTAACTTCTTGAAAGATCAAATACCTAAATGGGTGGCAATGGTTGGCTATGTTGTACTTGCAGCCATACCTGTAATCACAGTTCCTTTAATCTTCCATAAGTTGAAATGGTACGGTATTTTGGCTCAC

mRNA sequence

ATGACTCAAGGTTACAGGGTTTTCATTGCCATTGCTATGATACTTGGTGATGGTCTTTACCATGTATTCTTCATGCCTTTTCAAACATTCTACAGCTTAGCTAAGCAGAAGTTCAGCAATGAAAAATTGAAAATGTTGATTCATCATTCGAAGTTACTGACTACGATGCTCAACGGGGAACTGATTAACTTCTTGAAAGATCAAATACCTAAATGGGTGGCAATGGTTGGCTATGTTGTACTTGCAGCCATACCTGTAATCACAGTTCCTTTAATCTTCCATAAGTTGAAATGGTACGGTATTTTGGCTCAC

Coding sequence (CDS)

ATGACTCAAGGTTACAGGGTTTTCATTGCCATTGCTATGATACTTGGTGATGGTCTTTACCATGTATTCTTCATGCCTTTTCAAACATTCTACAGCTTAGCTAAGCAGAAGTTCAGCAATGAAAAATTGAAAATGTTGATTCATCATTCGAAGTTACTGACTACGATGCTCAACGGGGAACTGATTAACTTCTTGAAAGATCAAATACCTAAATGGGTGGCAATGGTTGGCTATGTTGTACTTGCAGCCATACCTGTAATCACAGTTCCTTTAATCTTCCATAAGTTGAAATGGTACGGTATTTTGGCTCAC

Protein sequence

MTQGYRVFIAIAMILGDGLYHVFFMPFQTFYSLAKQKFSNEKLKMLIHHSKLLTTMLNGELINFLKDQIPKWVAMVGYVVLAAIPVITVPLIFHKLKWYGILAH

Homology

[Close]

BLAST of CSPI03G39380 vs. ExPASy Swiss-Prot
Match: Q9SHY2 (Probable metal-nicotianamine transporter YSL7 OS=Arabidopsis thaliana OX=3702 GN=YSL7 PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 2.7e-17
Identity = 53/103 (51.46%), Postives = 67/103 (65.05%), Query Frame = 0


Query: 3   QGYRVFIAIAMILGDGLYHVFFMPFQTFYSLAKQKFSNEKLKMLIHHSKLLTTMLNGELI 62
           QGYRVFIAIAMILGDGLY+   +  +T + L KQ  + + L +  H S    T+   +  
Sbjct: 319 QGYRVFIAIAMILGDGLYNFIKVLGRTVFGLYKQFKNKDVLPINDHTSTAPVTISYDDKR 378

Query: 63  N---FLKDQIPKWVAMVGYVVLAAIPVITVPLIFHKLKWYGIL 103
               FLKD+IP W A+ GYVVLA + +ITVP IFH+LKWY IL
Sbjct: 379 RTELFLKDRIPSWFAVTGYVVLAIVSIITVPHIFHQLKWYHIL 421

[Close]

BLAST of CSPI03G39380 vs. ExPASy Swiss-Prot
Match: Q7XKF4 (Probable metal-nicotianamine transporter YSL13 OS=Oryza sativa subsp. japonica OX=39947 GN=YSL13 PE=2 SV=2)

HSP 1 Score: 73.6 bits (179), Expect = 1.5e-12
Identity = 50/108 (46.30%), Postives = 62/108 (57.41%), Query Frame = 0


Query: 3   QGYRVFIAIAMILGDGLYHVFFMPFQTFYSLAKQKFSNEKLKMLIHHSKLLTTML----- 62
           QGYRVFIAIA+ILGDGLY+   M   T +SL  Q        + +    ++TT       
Sbjct: 351 QGYRVFIAIALILGDGLYNFLKMIILTAFSLRSQIKKKNASTLPVSDDGMVTTTAAVSYD 410

Query: 63  ---NGELINFLKDQIPKWVAMVGYVVLAAIPVITVPLIFHKLKWYGIL 103
                EL  F+KDQIP +VA  GY V+AAI + TVP I  +LKWY IL
Sbjct: 411 EERRNEL--FVKDQIPWYVAYGGYAVVAAISIGTVPQIIPQLKWYQIL 456

[Close]

BLAST of CSPI03G39380 vs. ExPASy Swiss-Prot
Match: Q5JQD7 (Probable metal-nicotianamine transporter YSL12 OS=Oryza sativa subsp. japonica OX=39947 GN=YSL12 PE=2 SV=2)

HSP 1 Score: 71.2 bits (173), Expect = 7.6e-12
Identity = 48/109 (44.04%), Postives = 63/109 (57.80%), Query Frame = 0


Query: 3   QGYRVFIAIAMILGDGLYHVFFMPFQTFYSLAKQKFSNEKLKMLIHHSKLLTTMLNGELI 62
           QGYRVFI+IA+ILGDGLY+   +  +T          N  L +  + S ++ T    E I
Sbjct: 347 QGYRVFISIALILGDGLYNFVKVLIRTTAGFVVMMKKNSTLPVSNNGSPMVAT----EAI 406

Query: 63  N---------FLKDQIPKWVAMVGYVVLAAIPVITVPLIFHKLKWYGIL 103
           +         FLKDQIPK VA  GYV +AA+ + T+P IF +LKWY IL
Sbjct: 407 SFDDERRTELFLKDQIPKTVAFGGYVAVAAVSIGTLPQIFPQLKWYYIL 451

[Close]

BLAST of CSPI03G39380 vs. ExPASy Swiss-Prot
Match: Q7XRV2 (Probable metal-nicotianamine transporter YSL6 OS=Oryza sativa subsp. japonica OX=39947 GN=YSL6 PE=2 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 9.9e-12
Identity = 43/103 (41.75%), Postives = 65/103 (63.11%), Query Frame = 0


Query: 4   GYRVFIAIAMILGDGLYHVFFMPFQTFYSLAKQKFSNEKLKMLIHHSKLLTTMLNGE--L 63
           GY+VFI++++ILGDGLY++  + + T   +   +    +L ++  H     + L+ E  L
Sbjct: 321 GYKVFISVSVILGDGLYNLIKIIYATIKEVMNARSKQGRLPLVRVHDDDEGSKLSAEEKL 380

Query: 64  IN--FLKDQIPKWVAMVGYVVLAAIPVITVPLIFHKLKWYGIL 103
            N  FLKD+IP W+A  GYV LAAI   TVP+IF ++KWY +L
Sbjct: 381 RNDTFLKDRIPSWLAGSGYVGLAAISTATVPMIFPQVKWYLVL 423

[Close]

BLAST of CSPI03G39380 vs. ExPASy Swiss-Prot
Match: Q7XRV1 (Probable metal-nicotianamine transporter YSL5 OS=Oryza sativa subsp. japonica OX=39947 GN=YSL5 PE=2 SV=3)

HSP 1 Score: 70.5 bits (171), Expect = 1.3e-11
Identity = 45/105 (42.86%), Postives = 65/105 (61.90%), Query Frame = 0


Query: 4   GYRVFIAIAMILGDGLYHV--FFMPFQTFYSLAKQKFSNEKLKMLIHHS----KLLTTML 63
           GY+VFIAI++ILGDGLY++   F+        A+ K  +  ++ L+       +LL    
Sbjct: 310 GYKVFIAISVILGDGLYNLVKVFLIIAKEICNARSKEHDLPVQALLQDDDSSRQLLDEKR 369

Query: 64  NGELINFLKDQIPKWVAMVGYVVLAAIPVITVPLIFHKLKWYGIL 103
             E+  FLKD IP W+A+ GY+VLAAI  + VP+IF +LKWY +L
Sbjct: 370 QTEI--FLKDSIPTWLAVSGYIVLAAISTVAVPIIFPQLKWYLVL 412

[Close]

BLAST of CSPI03G39380 vs. ExPASy TrEMBL
Match: A0A0A0LCV1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G828970 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.9e-50
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0


Query: 1   MTQGYRVFIAIAMILGDGLYHVFFMPFQTFYSLAKQKFSNEKLKMLIHHSKLLTTMLNGE 60
           MTQGYRVFIAIAMILGDGLYHVFFMPFQTFYSLAKQKFSNEKLKMLIHHSKLLTTMLNGE
Sbjct: 1   MTQGYRVFIAIAMILGDGLYHVFFMPFQTFYSLAKQKFSNEKLKMLIHHSKLLTTMLNGE 60

Query: 61  LINFLKDQIPKWVAMVGYVVLAAIPVITVPLIFHKLKWYGILAH 105
           LINFLKDQIPKWVAMVGYVVLAAIPVITVPLIFHKLKWYGILAH
Sbjct: 61  LINFLKDQIPKWVAMVGYVVLAAIPVITVPLIFHKLKWYGILAH 104

[Close]

BLAST of CSPI03G39380 vs. ExPASy TrEMBL
Match: A0A6J1DJP2 (probable metal-nicotianamine transporter YSL7 OS=Momordica charantia OX=3673 GN=LOC111020688 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 4.0e-24
Identity = 65/100 (65.00%), Postives = 74/100 (74.00%), Query Frame = 0


Query: 3   QGYRVFIAIAMILGDGLYHVFFMPFQTFYSLAKQKFSNEKLKMLIHHSKLLTTMLNGELI 62
           QGYRVFIAI+M+LGDGLYHVF+M FQTFYSLAKQK  +E        S++          
Sbjct: 306 QGYRVFIAISMMLGDGLYHVFYMLFQTFYSLAKQKSDSENANT---SSEITDYDAQRRTE 365

Query: 63  NFLKDQIPKWVAMVGYVVLAAIPVITVPLIFHKLKWYGIL 103
            FLKDQIP WVA++GYVVLA I VITVPLIFH+LKWY IL
Sbjct: 366 YFLKDQIPNWVALIGYVVLAVISVITVPLIFHQLKWYHIL 402

[Close]

BLAST of CSPI03G39380 vs. ExPASy TrEMBL
Match: A0A6J1KGN4 (probable metal-nicotianamine transporter YSL7 OS=Cucurbita maxima OX=3661 GN=LOC111493049 PE=4 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 3.8e-22
Identity = 62/102 (60.78%), Postives = 75/102 (73.53%), Query Frame = 0


Query: 3   QGYRVFIAIAMILGDGLYHVFFMPFQTFYSLAKQKFSNEKLKMLIHHSKLLTTMLNGE-- 62
           QGYRVF AIAM+LGDGLYHVFFM FQTFYSLA+QK S++        S L  T  + +  
Sbjct: 319 QGYRVFTAIAMMLGDGLYHVFFMLFQTFYSLAQQKLSHDS-----GDSSLDATDYDAKRR 378

Query: 63  LINFLKDQIPKWVAMVGYVVLAAIPVITVPLIFHKLKWYGIL 103
           + +F KDQIP WVAM+GY +LA I +I VPLIFH+LKWY +L
Sbjct: 379 IEHFTKDQIPNWVAMLGYGILAVISIIAVPLIFHQLKWYHVL 415

[Close]

BLAST of CSPI03G39380 vs. ExPASy TrEMBL
Match: A0A6J1G9V0 (probable metal-nicotianamine transporter YSL7 OS=Cucurbita moschata OX=3662 GN=LOC111452108 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 4.9e-22
Identity = 61/102 (59.80%), Postives = 75/102 (73.53%), Query Frame = 0


Query: 3   QGYRVFIAIAMILGDGLYHVFFMPFQTFYSLAKQKFSNEKLKMLIHHSKLLTTMLNGE-- 62
           QGYRVF AIAM+LGDGLYHVFFM FQTFYSLA+QK S++        S L  T  + +  
Sbjct: 319 QGYRVFTAIAMMLGDGLYHVFFMLFQTFYSLAQQKLSHDH-----GDSSLEATDYDAKQR 378

Query: 63  LINFLKDQIPKWVAMVGYVVLAAIPVITVPLIFHKLKWYGIL 103
           + +F KDQIP WVAM+GY +LA + +I VPLIFH+LKWY +L
Sbjct: 379 IDHFTKDQIPNWVAMLGYGILAVVSIIAVPLIFHQLKWYHVL 415

[Close]

BLAST of CSPI03G39380 vs. ExPASy TrEMBL
Match: A0A5D3BWT5 (Putative metal-nicotianamine transporter YSL7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1856G00190 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 8.4e-22
Identity = 62/100 (62.00%), Postives = 73/100 (73.00%), Query Frame = 0


Query: 3   QGYRVFIAIAMILGDGLYHVFFMPFQTFYSLAKQKFSNEKLKMLIHHSKLLTTMLNGELI 62
           QGYRVFIAIAM+LGDGLYHV FM  QTFYSL+KQK        L   S++        + 
Sbjct: 318 QGYRVFIAIAMMLGDGLYHVCFMLSQTFYSLSKQKSGCGNADSL---SEINDYDARRRIE 377

Query: 63  NFLKDQIPKWVAMVGYVVLAAIPVITVPLIFHKLKWYGIL 103
            FLKDQIP WVA++GYV+LAAI +ITVPLIFH+LKWY +L
Sbjct: 378 YFLKDQIPNWVALLGYVILAAISIITVPLIFHQLKWYHVL 414

[Close]

BLAST of CSPI03G39380 vs. NCBI nr
Match: KGN59765.2 (hypothetical protein Csa_001326 [Cucumis sativus])

HSP 1 Score: 198.0 bits (502), Expect = 4.1e-47
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 1   MTQGYRVFIAIAMILGDGLYHVFFMPFQTFYSLAKQKFSNEKLKMLIHHSKLLTTMLNGE 60
           MTQGYRVFIAIAMILGDGLYHVFFMPFQTFYSLAKQKFSNEKLKMLIHHSKLLTTMLNGE
Sbjct: 91  MTQGYRVFIAIAMILGDGLYHVFFMPFQTFYSLAKQKFSNEKLKMLIHHSKLLTTMLNGE 150

Query: 61  LINFLKDQIPKWVAMVGYVVLAAIPVITVPLIFHKLKWY 100
           LINFLKDQIPKWVAMVGYVVLAAIPVITVPLIFHKLKWY
Sbjct: 151 LINFLKDQIPKWVAMVGYVVLAAIPVITVPLIFHKLKWY 189

[Close]

BLAST of CSPI03G39380 vs. NCBI nr
Match: XP_038905641.1 (probable metal-nicotianamine transporter YSL7 [Benincasa hispida])

HSP 1 Score: 127.5 bits (319), Expect = 6.8e-26
Identity = 71/102 (69.61%), Postives = 80/102 (78.43%), Query Frame = 0


Query: 3   QGYRVFIAIAMILGDGLYHVFFMPFQTFYSLAKQKFSNEKLKMLIHHSKLLTTMLNGELI 62
           QGYRVFIAIAM+LGDGLYHVFFM FQTFYSLAK++ SNE +      S +  T  + +  
Sbjct: 313 QGYRVFIAIAMMLGDGLYHVFFMLFQTFYSLAKKRSSNENI-----DSSMEVTDYDAQRR 372

Query: 63  N--FLKDQIPKWVAMVGYVVLAAIPVITVPLIFHKLKWYGIL 103
           +  FLKDQIP WVAMVGYVVLAAI VITVPLIFH+LKWY IL
Sbjct: 373 SEYFLKDQIPNWVAMVGYVVLAAISVITVPLIFHQLKWYHIL 409

[Close]

BLAST of CSPI03G39380 vs. NCBI nr
Match: XP_038877262.1 (probable metal-nicotianamine transporter YSL7 [Benincasa hispida])

HSP 1 Score: 120.9 bits (302), Expect = 6.3e-24
Identity = 66/102 (64.71%), Postives = 77/102 (75.49%), Query Frame = 0


Query: 3   QGYRVFIAIAMILGDGLYHVFFMPFQTFYSLAKQKFSNEKLKMLIHHSKLLTTMLNGELI 62
           QGYRVFIAI+M+LGDGLYHVFFM FQTFYSL+KQK  +E        S L  T  + +  
Sbjct: 317 QGYRVFIAISMMLGDGLYHVFFMLFQTFYSLSKQKSGSEN-----DDSSLEVTDYDAQRR 376

Query: 63  N--FLKDQIPKWVAMVGYVVLAAIPVITVPLIFHKLKWYGIL 103
              FLKDQIP WVAM+GYV+LAAI +ITVP+IFH+LKWY IL
Sbjct: 377 TEYFLKDQIPNWVAMLGYVILAAISIITVPIIFHQLKWYHIL 413

[Close]

BLAST of CSPI03G39380 vs. NCBI nr
Match: XP_022153106.1 (probable metal-nicotianamine transporter YSL7 [Momordica charantia])

HSP 1 Score: 120.6 bits (301), Expect = 8.3e-24
Identity = 65/100 (65.00%), Postives = 74/100 (74.00%), Query Frame = 0


Query: 3   QGYRVFIAIAMILGDGLYHVFFMPFQTFYSLAKQKFSNEKLKMLIHHSKLLTTMLNGELI 62
           QGYRVFIAI+M+LGDGLYHVF+M FQTFYSLAKQK  +E        S++          
Sbjct: 306 QGYRVFIAISMMLGDGLYHVFYMLFQTFYSLAKQKSDSENANT---SSEITDYDAQRRTE 365

Query: 63  NFLKDQIPKWVAMVGYVVLAAIPVITVPLIFHKLKWYGIL 103
            FLKDQIP WVA++GYVVLA I VITVPLIFH+LKWY IL
Sbjct: 366 YFLKDQIPNWVALIGYVVLAVISVITVPLIFHQLKWYHIL 402

[Close]

BLAST of CSPI03G39380 vs. NCBI nr
Match: KAG7036610.1 (putative metal-nicotianamine transporter YSL7 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 114.0 bits (284), Expect = 7.8e-22
Identity = 62/102 (60.78%), Postives = 75/102 (73.53%), Query Frame = 0


Query: 3   QGYRVFIAIAMILGDGLYHVFFMPFQTFYSLAKQKFSNEKLKMLIHHSKLLTTMLNGE-- 62
           QGYRVF AIAM+LGDGLYHVFFM FQTFYSLA+QK S++        S L  T  + +  
Sbjct: 319 QGYRVFTAIAMMLGDGLYHVFFMLFQTFYSLAQQKLSHDH-----GDSSLEATDYDAKQR 378

Query: 63  LINFLKDQIPKWVAMVGYVVLAAIPVITVPLIFHKLKWYGIL 103
           + +F KDQIP WVAM+GY +LA I +I VPLIFH+LKWY +L
Sbjct: 379 IDHFTKDQIPNWVAMLGYGILAVISIIAVPLIFHQLKWYHVL 415

[Close]

BLAST of CSPI03G39380 vs. TAIR 10
Match: AT1G65730.1 (YELLOW STRIPE like 7 )

HSP 1 Score: 89.4 bits (220), Expect = 1.9e-18
Identity = 53/103 (51.46%), Postives = 67/103 (65.05%), Query Frame = 0


Query: 3   QGYRVFIAIAMILGDGLYHVFFMPFQTFYSLAKQKFSNEKLKMLIHHSKLLTTMLNGELI 62
           QGYRVFIAIAMILGDGLY+   +  +T + L KQ  + + L +  H S    T+   +  
Sbjct: 319 QGYRVFIAIAMILGDGLYNFIKVLGRTVFGLYKQFKNKDVLPINDHTSTAPVTISYDDKR 378

Query: 63  N---FLKDQIPKWVAMVGYVVLAAIPVITVPLIFHKLKWYGIL 103
               FLKD+IP W A+ GYVVLA + +ITVP IFH+LKWY IL
Sbjct: 379 RTELFLKDRIPSWFAVTGYVVLAIVSIITVPHIFHQLKWYHIL 421

[Close]

BLAST of CSPI03G39380 vs. TAIR 10
Match: AT4G24120.1 (YELLOW STRIPE like 1 )

HSP 1 Score: 68.9 bits (167), Expect = 2.7e-12
Identity = 38/99 (38.38%), Postives = 59/99 (59.60%), Query Frame = 0


Query: 4   GYRVFIAIAMILGDGLYHVFFMPFQTFYSLAKQKFSNEKLKMLIHHSKLLTTMLNGELIN 63
           GY+VF+++A+ILGDGLY    + F T  ++  +  +       + H K    +   E  N
Sbjct: 325 GYKVFLSVALILGDGLYTFVKILFVTIANVNARLKNKPNDLDDVGHKKQRKDLKEDE--N 384

Query: 64  FLKDQIPKWVAMVGYVVLAAIPVITVPLIFHKLKWYGIL 103
           FL+D+IP W A+ GY+  AA+  + VPLIF +LKWY ++
Sbjct: 385 FLRDKIPMWFAVSGYLTFAAVSTVVVPLIFPQLKWYYVI 421

[Close]

BLAST of CSPI03G39380 vs. TAIR 10
Match: AT5G24380.1 (YELLOW STRIPE like 2 )

HSP 1 Score: 67.4 bits (163), Expect = 7.8e-12
Identity = 39/102 (38.24%), Postives = 61/102 (59.80%), Query Frame = 0


Query: 4   GYRVFIAIAMILGDGLYH---VFFMPFQTFYSLAKQKFSNEKLKMLIHHSKLLTTMLNGE 63
           GY+VFI IA+ILGDGLY+   + F   ++F+S   +  S   L  +   S   +  L  E
Sbjct: 310 GYKVFICIALILGDGLYNFVKILFFTGRSFHSRLSKTNSISTLVEVPEDSTKESDNLKRE 369

Query: 64  LINFLKDQIPKWVAMVGYVVLAAIPVITVPLIFHKLKWYGIL 103
              F+++ IP W+A VGY+  + + +I +PL+F +LKWY +L
Sbjct: 370 NEVFVRESIPLWMACVGYLFFSLVSIIAIPLMFPQLKWYFVL 411

[Close]

BLAST of CSPI03G39380 vs. TAIR 10
Match: AT5G53550.1 (YELLOW STRIPE like 3 )

HSP 1 Score: 64.7 bits (156), Expect = 5.0e-11
Identity = 37/99 (37.37%), Postives = 58/99 (58.59%), Query Frame = 0


Query: 4   GYRVFIAIAMILGDGLYHVFFMPFQTFYSLAKQKFSNEKLKMLIHHSKLLTTMLNGELIN 63
           GY+VFI+I++ILGDGLY    + F+T  ++  +  +    K      K     L  + I 
Sbjct: 322 GYKVFISISLILGDGLYQFIKILFKTGINMYVKLNNRNSGKSNSEKDKQSIADLKRDEI- 381

Query: 64  FLKDQIPKWVAMVGYVVLAAIPVITVPLIFHKLKWYGIL 103
           F++D IP WVA VGY   + + +I +P++F +LKWY I+
Sbjct: 382 FVRDSIPLWVAAVGYAAFSVVSIIAIPIMFPELKWYFIV 419

[Close]

BLAST of CSPI03G39380 vs. TAIR 10
Match: AT5G53550.2 (YELLOW STRIPE like 3 )

HSP 1 Score: 64.7 bits (156), Expect = 5.0e-11
Identity = 37/99 (37.37%), Postives = 58/99 (58.59%), Query Frame = 0


Query: 4   GYRVFIAIAMILGDGLYHVFFMPFQTFYSLAKQKFSNEKLKMLIHHSKLLTTMLNGELIN 63
           GY+VFI+I++ILGDGLY    + F+T  ++  +  +    K      K     L  + I 
Sbjct: 322 GYKVFISISLILGDGLYQFIKILFKTGINMYVKLNNRNSGKSNSEKDKQSIADLKRDEI- 381

Query: 64  FLKDQIPKWVAMVGYVVLAAIPVITVPLIFHKLKWYGIL 103
           F++D IP WVA VGY   + + +I +P++F +LKWY I+
Sbjct: 382 FVRDSIPLWVAAVGYAAFSVVSIIAIPIMFPELKWYFIV 419

The following BLAST results are available for this feature:

BLAST of CSPI03G39380 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SHY2	2.7e-17	51.46	Probable metal-nicotianamine transporter YSL7 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q7XKF4	1.5e-12	46.30	Probable metal-nicotianamine transporter YSL13 OS=Oryza sativa subsp. japonica O...	[more]
Q5JQD7	7.6e-12	44.04	Probable metal-nicotianamine transporter YSL12 OS=Oryza sativa subsp. japonica O...	[more]
Q7XRV2	9.9e-12	41.75	Probable metal-nicotianamine transporter YSL6 OS=Oryza sativa subsp. japonica OX...	[more]
Q7XRV1	1.3e-11	42.86	Probable metal-nicotianamine transporter YSL5 OS=Oryza sativa subsp. japonica OX...	[more]

BLAST of CSPI03G39380 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LCV1	1.9e-50	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G828970 PE=4 SV=1	[more]
A0A6J1DJP2	4.0e-24	65.00	probable metal-nicotianamine transporter YSL7 OS=Momordica charantia OX=3673 GN=...	[more]
A0A6J1KGN4	3.8e-22	60.78	probable metal-nicotianamine transporter YSL7 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1G9V0	4.9e-22	59.80	probable metal-nicotianamine transporter YSL7 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A5D3BWT5	8.4e-22	62.00	Putative metal-nicotianamine transporter YSL7 OS=Cucumis melo var. makuwa OX=119...	[more]

BLAST of CSPI03G39380 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN59765.2	4.1e-47	100.00	hypothetical protein Csa_001326 [Cucumis sativus]	[more]
XP_038905641.1	6.8e-26	69.61	probable metal-nicotianamine transporter YSL7 [Benincasa hispida]	[more]
XP_038877262.1	6.3e-24	64.71	probable metal-nicotianamine transporter YSL7 [Benincasa hispida]	[more]
XP_022153106.1	8.3e-24	65.00	probable metal-nicotianamine transporter YSL7 [Momordica charantia]	[more]
KAG7036610.1	7.8e-22	60.78	putative metal-nicotianamine transporter YSL7 [Cucurbita argyrosperma subsp. arg...	[more]

BLAST of CSPI03G39380 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G65730.1	1.9e-18	51.46	YELLOW STRIPE like 7	[more]
AT4G24120.1	2.7e-12	38.38	YELLOW STRIPE like 1	[more]
AT5G24380.1	7.8e-12	38.24	YELLOW STRIPE like 2	[more]
AT5G53550.1	5.0e-11	37.37	YELLOW STRIPE like 3	[more]
AT5G53550.2	5.0e-11	37.37	YELLOW STRIPE like 3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004813	Oligopeptide transporter, OPT superfamily	PFAM	PF03169	OPT	coord: 2..102 e-value: 1.8E-6 score: 26.9
IPR045035	Metal-nicotianamine transporter YSL-like	PANTHER	PTHR31645	OLIGOPEPTIDE TRANSPORTER YGL114W-RELATED	coord: 3..102
None	No IPR available	PANTHER	PTHR31645:SF20	METAL-NICOTIANAMINE TRANSPORTER YSL7-RELATED	coord: 3..102

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G39380.1	CSPI03G39380.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane
molecular_function	GO:0035673	oligopeptide transmembrane transporter activity