CSPI03G38610 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGCCGAGTATGACGAGAGGGCGGTTGAGAGTGGGAGTTTGGTGGTTTCTGGATGTGGGTTTGATTCGGTTCCAACGAAATTGGGTTTGATATTCAATTTGAGGCAGTGGGTTGGGAAATCAACGCCGAGTTGGGTTGAAGCGTATGTGAATGTGGAGTCTAATGGAGGTATGTCTTATAATTTTGGGACTTACGAATCAACTGTTTTGGATGTGACTAATGTTGATGCGTTGGTTCAATTGAGACAGTCAAGGACCCCTAGACGTGGCTCCAAGGTTAGCAAAATTATTTCTCTC ATGGAGGCCGAGTATGACGAGAGGGCGGTTGAGAGTGGGAGTTTGGTGGTTTCTGGATGTGGGTTTGATTCGGTTCCAACGAAATTGGGTTTGATATTCAATTTGAGGCAGTGGGTTGGGAAATCAACGCCGAGTTGGGTTGAAGCGTATGTGAATGTGGAGTCTAATGGAGGTATGTCTTATAATTTTGGGACTTACGAATCAACTGTTTTGGATGTGACTAATGTTGATGCGTTGGTTCAATTGAGACAGTCAAGGACCCCTAGACGTGGCTCCAAGGTTAGCAAAATTATTTCTCTC ATGGAGGCCGAGTATGACGAGAGGGCGGTTGAGAGTGGGAGTTTGGTGGTTTCTGGATGTGGGTTTGATTCGGTTCCAACGAAATTGGGTTTGATATTCAATTTGAGGCAGTGGGTTGGGAAATCAACGCCGAGTTGGGTTGAAGCGTATGTGAATGTGGAGTCTAATGGAGGTATGTCTTATAATTTTGGGACTTACGAATCAACTGTTTTGGATGTGACTAATGTTGATGCGTTGGTTCAATTGAGACAGTCAAGGACCCCTAGACGTGGCTCCAAGGTTAGCAAAATTATTTCTCTC MEAEYDERAVESGSLVVSGCGFDSVPTKLGLIFNLRQWVGKSTPSWVEAYVNVESNGGMSYNFGTYESTVLDVTNVDALVQLRQSRTPRRGSKVSKIISL Homology
BLAST of CSPI03G38610 vs. ExPASy Swiss-Prot
Match: Q8LGI2 (Probable mitochondrial saccharopine dehydrogenase-like oxidoreductase At5g39410 OS=Arabidopsis thaliana OX=3702 GN=At5g39410 PE=1 SV=2) HSP 1 Score: 110.5 bits (275), Expect = 1.1e-23 Identity = 52/90 (57.78%), Postives = 70/90 (77.78%), Query Frame = 0
BLAST of CSPI03G38610 vs. ExPASy Swiss-Prot
Match: Q9GZE9 (Lipid droplet localized protein OS=Caenorhabditis elegans OX=6239 GN=ldp-1 PE=1 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 2.7e-06 Identity = 31/93 (33.33%), Postives = 54/93 (58.06%), Query Frame = 0
BLAST of CSPI03G38610 vs. ExPASy Swiss-Prot
Match: Q6AY30 (Saccharopine dehydrogenase-like oxidoreductase OS=Rattus norvegicus OX=10116 GN=Sccpdh PE=1 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 1.7e-05 Identity = 30/101 (29.70%), Postives = 52/101 (51.49%), Query Frame = 0
BLAST of CSPI03G38610 vs. ExPASy Swiss-Prot
Match: Q8R127 (Saccharopine dehydrogenase-like oxidoreductase OS=Mus musculus OX=10090 GN=Sccpdh PE=1 SV=1) HSP 1 Score: 49.7 bits (117), Expect = 2.3e-05 Identity = 26/84 (30.95%), Postives = 47/84 (55.95%), Query Frame = 0
BLAST of CSPI03G38610 vs. ExPASy Swiss-Prot
Match: Q5R5C9 (Saccharopine dehydrogenase-like oxidoreductase OS=Pongo abelii OX=9601 GN=SCCPDH PE=2 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 3.0e-05 Identity = 26/86 (30.23%), Postives = 48/86 (55.81%), Query Frame = 0
BLAST of CSPI03G38610 vs. ExPASy TrEMBL
Match: A0A0A0LG00 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G824480 PE=4 SV=1) HSP 1 Score: 195.7 bits (496), Expect = 9.4e-47 Identity = 97/100 (97.00%), Postives = 98/100 (98.00%), Query Frame = 0
BLAST of CSPI03G38610 vs. ExPASy TrEMBL
Match: A0A5D3DPV4 (Putative mitochondrial saccharopine dehydrogenase-like oxidoreductase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007630 PE=4 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 1.8e-34 Identity = 74/93 (79.57%), Postives = 81/93 (87.10%), Query Frame = 0
BLAST of CSPI03G38610 vs. ExPASy TrEMBL
Match: A0A1S3B7Z4 (probable mitochondrial saccharopine dehydrogenase-like oxidoreductase At5g39410 OS=Cucumis melo OX=3656 GN=LOC103487170 PE=4 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 1.8e-34 Identity = 74/93 (79.57%), Postives = 81/93 (87.10%), Query Frame = 0
BLAST of CSPI03G38610 vs. ExPASy TrEMBL
Match: A0A6J1CTM9 (probable mitochondrial saccharopine dehydrogenase-like oxidoreductase At5g39410 OS=Momordica charantia OX=3673 GN=LOC111014111 PE=4 SV=1) HSP 1 Score: 123.6 bits (309), Expect = 4.6e-25 Identity = 61/89 (68.54%), Postives = 71/89 (79.78%), Query Frame = 0
BLAST of CSPI03G38610 vs. ExPASy TrEMBL
Match: A0A6J1I397 (probable mitochondrial saccharopine dehydrogenase-like oxidoreductase At5g39410 OS=Cucurbita maxima OX=3661 GN=LOC111468612 PE=4 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 3.3e-23 Identity = 55/89 (61.80%), Postives = 70/89 (78.65%), Query Frame = 0
BLAST of CSPI03G38610 vs. NCBI nr
Match: KAE8651205.1 (hypothetical protein Csa_002660 [Cucumis sativus]) HSP 1 Score: 186.4 bits (472), Expect = 1.2e-43 Identity = 90/97 (92.78%), Postives = 94/97 (96.91%), Query Frame = 0
BLAST of CSPI03G38610 vs. NCBI nr
Match: XP_008443614.1 (PREDICTED: probable mitochondrial saccharopine dehydrogenase-like oxidoreductase At5g39410 [Cucumis melo] >KAA0053797.1 putative mitochondrial saccharopine dehydrogenase-like oxidoreductase [Cucumis melo var. makuwa] >TYK25604.1 putative mitochondrial saccharopine dehydrogenase-like oxidoreductase [Cucumis melo var. makuwa]) HSP 1 Score: 154.8 bits (390), Expect = 3.8e-34 Identity = 74/93 (79.57%), Postives = 81/93 (87.10%), Query Frame = 0
BLAST of CSPI03G38610 vs. NCBI nr
Match: XP_038905773.1 (probable mitochondrial saccharopine dehydrogenase-like oxidoreductase At5g39410 [Benincasa hispida]) HSP 1 Score: 142.5 bits (358), Expect = 2.0e-30 Identity = 69/90 (76.67%), Postives = 75/90 (83.33%), Query Frame = 0
BLAST of CSPI03G38610 vs. NCBI nr
Match: XP_022144422.1 (probable mitochondrial saccharopine dehydrogenase-like oxidoreductase At5g39410 [Momordica charantia]) HSP 1 Score: 123.6 bits (309), Expect = 9.4e-25 Identity = 61/89 (68.54%), Postives = 71/89 (79.78%), Query Frame = 0
BLAST of CSPI03G38610 vs. NCBI nr
Match: XP_022969659.1 (probable mitochondrial saccharopine dehydrogenase-like oxidoreductase At5g39410 [Cucurbita maxima]) HSP 1 Score: 117.5 bits (293), Expect = 6.7e-23 Identity = 55/89 (61.80%), Postives = 70/89 (78.65%), Query Frame = 0
BLAST of CSPI03G38610 vs. TAIR 10
Match: AT5G39410.1 (Saccharopine dehydrogenase ) HSP 1 Score: 110.5 bits (275), Expect = 7.7e-25 Identity = 52/90 (57.78%), Postives = 70/90 (77.78%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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