CSPI03G38210 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G38210
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	50S ribosomal protein L25
Location	Chr3: 33079281 .. 33081315 (-)
RNA-Seq Expression	CSPI03G38210
Synteny	CSPI03G38210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATAACCCGTGAGAATTCCAGCCGCCTCACCTTCAACTCTCGCTCTTACTTCACTCCAACCGCGACGGCGACGGCGACGGCAACGACAGCCGGCGGCCAATTTTCTGTCCCTTCAACCTCTCCAGCTTCCTTCCATCGGAGTCCTCACCGGAGACAACTTGTATGAATTGAGCAAAAATCGGTCAAATATCCGTTTAAAATTCTGAACTAAAACCCTTTCTTAACCCCTTCCGATCATTCTTTTCCGCCCAATGCTACGCTTCTACCGCTCCCCCACCCTCTCCCGAGTCCTCCTCCGGCGGTANNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCGCCCCCCCGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGCCACTGCCCCCGCCTTCGATTCCGTTTCCGAACCTCTCTTTTCGTACTTGGAGGGATTTCCAAAACCAGATCCCAAATACGCCGAGACGATCCTCGCCATTCCTCGCTCCATCTCCGGCAAGAGCATTTCCGCTAAAGAGCGCAAGGCTGGCCGCGTTCCAAGCATCGTATTCGAGCAAGAGGACGGCCAACATGGCGGTAATAAGCGTCTGATATCTGTACGGACTAACCAGATCGTGAAGCTTGTCAAAAATCTCGGTCGCTCCTTCTTCCTCTCCAGGCTTTTCGATCTTGAGGTTCTGTCCGACTTCGAGTCCGGGGATATTGTCGAGAAGGTTCGGGTTTTACCTCGGAAGGTACTCTATTATCCTGTTTTAGGAAGAATCAGTAGTTCTTCTCATATTAGATACGATTTCTGTAAATTGCTTTTAGGAAGTTGTATGATATTTCCAACTTACTGAGTTTGGGAAGTGATTTACAAGAAGGCTTGAAATAATGACGATTGTTTCATGGGGGAGAAAGATTATGTTTTGTACTTTGGGGTACATATTCTTGCACCATTAGATATTTCATATGCTTAAATGAGGAACCCATCTATTTTAGCCTTCTGCTTTGTGCTGAGAGAATTATGCCCCTACTTTGGGAACTCTAATGTCTAACTCTAATGTCATGATCATTATGTTTCATCTCTATGTTTTGATTAATCAGAATATAAAAAGATGGGTTTAGTTTAGTTTTGATTACAAGTTAGTGTAAGTTCTTGTGAGACTGTATTTGAGTTAGATAATAGCCATTTTGAACTTGCACCGTCCATGTTTTTTCAGATTCATCTTCATGCGGGAACAGATGCTCCACTTAACGTTACTTTCATAAGGGCACCTTCACATGCTGTATTAAAAGTTGATGTACCTCTTGTGTTCAGAGGGGAAGATGTATGTCCTGGATTGCGAAAAGGTACTACTACAAGACTAAGTTCCTTGTATTCTATTTTCTGTAGTCTGGTAATATTATGTAGTAATAGGCAGCTATAGTAGTTTATGGGTTGGATTCTTAAATTCTCAAGCTAGACGGGGATATGGATCTAAATGTGTTAACATTTCCAGAATAGCTAGTACTAGATTGGAAGATCAGGTTGGTTTTCTGTTAGATTGAGTTGAAAGGATCTAGTTTCTGTTTTTGCAATGTACTTAAATCTTTCCAAAGAAGAATAAAACCGCACCTGAAAGAAAGTGTTGGAAGTATTTTTTGTTTTCTTTGTAGCTTGTAGTTTTCATTTGTACTCTTTTTGAAGTTCTGATCTACTTGGAAATAGTTTGTGTTCCAATAGAGAATCACAGGATGTGATCCTGATATGTAGTTTCAGAAGGGAATAATTATATTTTTACTCCTCTGATGACCATTTTTCTAATGTTTAACAAATTCTACAGGATCTTATTTGAATACAATTAAGAGGACTGTTAAATACCTTTGCCCTGCTGATATTATTCCCCCATATATCGATGTGGATCTGAGTGAGTTAGATGTTGGCCAAAAGTTGGTTATGGGTGACCTCAAGGTTCATCCTGCGTTAAAGCTTGTTAAGTCAAAGGACGAGCCTGTTTGTAAGATTGCGGGAGCCAGAGTTTCTGATCAACAAAAGAAATCAAAATAG

mRNA sequence

ATGATAACCCGTGAGAATTCCAGCCGCCTCACCTTCAACTCTCGCTCTTACTTCACTCCAACCGCGACGGCGACGGCGACGGCAACGACAGCCGGCGGCCAATTTTCTGTCCCTTCAACCTCTCCAGCTTCCTTCCATCGGAGTCCTCACCGGAGACAACTTGGATTTCCAAAACCAGATCCCAAATACGCCGAGACGATCCTCGCCATTCCTCGCTCCATCTCCGGCAAGAGCATTTCCGCTAAAGAGCGCAAGGCTGGCCGCGTTCCAAGCATCGTATTCGAGCAAGAGGACGGCCAACATGGCGGTAATAAGCGTCTGATATCTGTACGGACTAACCAGATCGTGAAGCTTGTCAAAAATCTCGGTCGCTCCTTCTTCCTCTCCAGGCTTTTCGATCTTGAGGTTCTGTCCGACTTCGAGTCCGGGGATATTGTCGAGAAGGTTCGGGTTTTACCTCGGAAGATTCATCTTCATGCGGGAACAGATGCTCCACTTAACGTTACTTTCATAAGGGCACCTTCACATGCTGTATTAAAAGTTGATGTACCTCTTGTGTTCAGAGGGGAAGATGTATGTCCTGGATTGCGAAAAGGATCTTATTTGAATACAATTAAGAGGACTGTTAAATACCTTTGCCCTGCTGATATTATTCCCCCATATATCGATGTGGATCTGAGTGAGTTAGATGTTGGCCAAAAGTTGGTTATGGGTGACCTCAAGGTTCATCCTGCGTTAAAGCTTGTTAAGTCAAAGGACGAGCCTGTTTGTAAGATTGCGGGAGCCAGAGTTTCTGATCAACAAAAGAAATCAAAATAG

Coding sequence (CDS)

ATGATAACCCGTGAGAATTCCAGCCGCCTCACCTTCAACTCTCGCTCTTACTTCACTCCAACCGCGACGGCGACGGCGACGGCAACGACAGCCGGCGGCCAATTTTCTGTCCCTTCAACCTCTCCAGCTTCCTTCCATCGGAGTCCTCACCGGAGACAACTTGGATTTCCAAAACCAGATCCCAAATACGCCGAGACGATCCTCGCCATTCCTCGCTCCATCTCCGGCAAGAGCATTTCCGCTAAAGAGCGCAAGGCTGGCCGCGTTCCAAGCATCGTATTCGAGCAAGAGGACGGCCAACATGGCGGTAATAAGCGTCTGATATCTGTACGGACTAACCAGATCGTGAAGCTTGTCAAAAATCTCGGTCGCTCCTTCTTCCTCTCCAGGCTTTTCGATCTTGAGGTTCTGTCCGACTTCGAGTCCGGGGATATTGTCGAGAAGGTTCGGGTTTTACCTCGGAAGATTCATCTTCATGCGGGAACAGATGCTCCACTTAACGTTACTTTCATAAGGGCACCTTCACATGCTGTATTAAAAGTTGATGTACCTCTTGTGTTCAGAGGGGAAGATGTATGTCCTGGATTGCGAAAAGGATCTTATTTGAATACAATTAAGAGGACTGTTAAATACCTTTGCCCTGCTGATATTATTCCCCCATATATCGATGTGGATCTGAGTGAGTTAGATGTTGGCCAAAAGTTGGTTATGGGTGACCTCAAGGTTCATCCTGCGTTAAAGCTTGTTAAGTCAAAGGACGAGCCTGTTTGTAAGATTGCGGGAGCCAGAGTTTCTGATCAACAAAAGAAATCAAAATAG

Protein sequence

MITRENSSRLTFNSRSYFTPTATATATATTAGGQFSVPSTSPASFHRSPHRRQLGFPKPDPKYAETILAIPRSISGKSISAKERKAGRVPSIVFEQEDGQHGGNKRLISVRTNQIVKLVKNLGRSFFLSRLFDLEVLSDFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHAVLKVDVPLVFRGEDVCPGLRKGSYLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLVKSKDEPVCKIAGARVSDQQKKSK*

Homology

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BLAST of CSPI03G38210 vs. ExPASy Swiss-Prot
Match: Q2ISF7 (50S ribosomal protein L25 OS=Rhodopseudomonas palustris (strain HaA2) OX=316058 GN=rplY PE=3 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.4e-20
Identity = 63/186 (33.87%), Postives = 100/186 (53.76%), Query Frame = 0


Query: 69  AIPRSISGKSISAKERKAGRVPSIVFEQEDGQHGGNKRLISVRT-NQIVKLVKNLGRSFF 128
           A  R  SGK  +  ER+AGRVP +++       G NK  + +   ++ ++L    GR  F
Sbjct: 9   ATARPKSGKGAARAERRAGRVPGVIY-------GDNKPPLPISVEDKDLRLRIQAGR--F 68

Query: 129 LSRLFDLEVLSDFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHAVLKVDVPLVF 188
           L+ +FD+ VL         +K RV+PR  HL    D P++V F+R    A +++ VPL  
Sbjct: 69  LTTIFDV-VLDG-------QKHRVIPRDYHLDPVKDFPVHVDFLRLGEGATIRISVPLHL 128

Query: 189 RGEDVCPGLRKGSYLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALK 248
           +G +  PG+++G   N +  TV    PAD IP +I+ D+S LD+G  L + D+ +   +K
Sbjct: 129 KGLESAPGVKRGGTFNIVTHTVDLEAPADAIPQFIEADVSTLDIGVSLHLSDIALPKGVK 177

Query: 249 LVKSKD 254
            V  +D
Sbjct: 189 SVSRED 177

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BLAST of CSPI03G38210 vs. ExPASy Swiss-Prot
Match: Q6N1P8 (50S ribosomal protein L25 OS=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) OX=258594 GN=rplY PE=1 SV=3)

HSP 1 Score: 100.1 bits (248), Expect = 4.0e-20
Identity = 63/186 (33.87%), Postives = 101/186 (54.30%), Query Frame = 0


Query: 69  AIPRSISGKSISAKERKAGRVPSIVFEQEDGQHGGNKRLISVRTNQIVKLVKNL-GRSFF 128
           A  R  SGK  +  ER+AGRVP +++       G N+  + +   +    ++ L GR  F
Sbjct: 9   ATARPKSGKGAARAERRAGRVPGVIY-------GDNQSPLPISVEEKELRLRILAGR--F 68

Query: 129 LSRLFDLEVLSDFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHAVLKVDVPLVF 188
           L+ +FD+ VL         +K RV+PR  HL    D P++V F+R  + A ++V VPL  
Sbjct: 69  LTTVFDV-VLDG-------KKHRVIPRDYHLDPVRDFPIHVDFLRLGAGATIRVSVPLHL 128

Query: 189 RGEDVCPGLRKGSYLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALK 248
           +G +V PG+++G   N +  TV+   PA+ IP +I+ D+S LD+G  L + D+ +   +K
Sbjct: 129 KGLEVAPGVKRGGTFNIVTHTVELEAPAENIPQFIEADVSTLDIGVSLHLSDIALPTGVK 177

Query: 249 LVKSKD 254
            V   D
Sbjct: 189 SVSRDD 177

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BLAST of CSPI03G38210 vs. ExPASy Swiss-Prot
Match: Q219F9 (50S ribosomal protein L25 OS=Rhodopseudomonas palustris (strain BisB18) OX=316056 GN=rplY PE=3 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 4.0e-20
Identity = 56/185 (30.27%), Postives = 99/185 (53.51%), Query Frame = 0


Query: 69  AIPRSISGKSISAKERKAGRVPSIVFEQEDGQHGGNKRLISVRTNQIVKLVKNLGRSFFL 128
           A  R   GK  +  ER+AGRVP +++       G NK  +++  +   +L   +    FL
Sbjct: 9   ATARPAGGKGAARAERRAGRVPGVIY-------GDNKPPVTISVDD-TELRARILAGRFL 68

Query: 129 SRLFDLEVLSDFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHAVLKVDVPLVFR 188
           + +FD+E+          +K RV+PR  HL    D P++V F+R    A+++V VPL  +
Sbjct: 69  TTIFDVELDG--------QKHRVIPRDFHLDPVRDFPIHVDFLRLGEGALIRVSVPLHLK 128

Query: 189 GEDVCPGLRKGSYLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKL 248
             +  PG+++G  +N +  TV+    A+ IP +I+ D+S+LD+G  L + D+ +   +K 
Sbjct: 129 NAEGAPGVKRGGTVNIVTHTVELEAEAESIPQFIEADVSQLDIGSSLHLSDVVLPKGVKT 177

Query: 249 VKSKD 254
           +  +D
Sbjct: 189 LSRED 177

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BLAST of CSPI03G38210 vs. ExPASy Swiss-Prot
Match: B3Q7X4 (50S ribosomal protein L25 OS=Rhodopseudomonas palustris (strain TIE-1) OX=395960 GN=rplY PE=3 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 4.0e-20
Identity = 63/186 (33.87%), Postives = 101/186 (54.30%), Query Frame = 0


Query: 69  AIPRSISGKSISAKERKAGRVPSIVFEQEDGQHGGNKRLISVRTNQIVKLVKNL-GRSFF 128
           A  R  SGK  +  ER+AGRVP +++       G N+  + +   +    ++ L GR  F
Sbjct: 9   ATARPKSGKGAARAERRAGRVPGVIY-------GDNQSPLPISVEEKELRLRILAGR--F 68

Query: 129 LSRLFDLEVLSDFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHAVLKVDVPLVF 188
           L+ +FD+ VL         +K RV+PR  HL    D P++V F+R  + A ++V VPL  
Sbjct: 69  LTTVFDV-VLDG-------KKHRVIPRDYHLDPVRDFPIHVDFLRLGAGATIRVSVPLHL 128

Query: 189 RGEDVCPGLRKGSYLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALK 248
           +G +V PG+++G   N +  TV+   PA+ IP +I+ D+S LD+G  L + D+ +   +K
Sbjct: 129 KGLEVAPGVKRGGTFNIVTHTVELEAPAENIPQFIEADVSTLDIGVSLHLSDIALPTGVK 177

Query: 249 LVKSKD 254
            V   D
Sbjct: 189 SVSRDD 177

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BLAST of CSPI03G38210 vs. ExPASy Swiss-Prot
Match: A8HS67 (50S ribosomal protein L25 OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 / NBRC 14845 / NCIMB 13405 / ORS 571) OX=438753 GN=rplY PE=3 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 2.6e-19
Identity = 59/191 (30.89%), Postives = 100/191 (52.36%), Query Frame = 0


Query: 69  AIPRSISGKSISAKERKAGRVPSIVFEQEDGQHGGNKRLISVRTNQIVKLVKNLGRSFFL 128
           A+ R+  GK  +  ER+AGRVP++++ ++          IS+   +I +++       FL
Sbjct: 9   AVARARGGKGAARAERRAGRVPAVIYGEKQ-----EPVTISLGHKEITRIIY---AGHFL 68

Query: 129 SRLFDLEVLSDFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHAVLKVDVPLVFR 188
           + LF+++V       D V K RV+PR   L    D PL+V F+R    A + V+VP+ F 
Sbjct: 69  TTLFEIDV-------DGV-KHRVIPRDYQLDPVKDLPLHVDFLRVSQGASVTVEVPVHFE 128

Query: 189 GEDVCPGLRKGSYLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKL 248
            +D  PGL+ G  LN +   V   CPA+ IP ++  DL+ L++G  L +  +K+   +  
Sbjct: 129 NQDKAPGLKSGGTLNVVAHAVALECPAEAIPDHVVADLTGLEIGDSLHLSKVKLPAGVSS 183

Query: 249 VKSKDEPVCKI 260
             + D+ +  I
Sbjct: 189 AVTGDDTLATI 183

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BLAST of CSPI03G38210 vs. ExPASy TrEMBL
Match: A0A0A0LFM4 (Ribosomal_TL5_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G822380 PE=4 SV=1)

HSP 1 Score: 428.7 bits (1101), Expect = 1.8e-116
Identity = 227/260 (87.31%), Postives = 233/260 (89.62%), Query Frame = 0


Query: 15  RSYFTPTATATATATTAGGQFSVPSTSPA--SFHRSPHRRQLGFPKPDPKYAETILAIPR 74
           R Y +PT +       +    + P+T+PA  S          GFPKPDPKYAETILAIPR
Sbjct: 3   RFYRSPTLSRVLLRRYSAA--TAPATAPAFDSVSEPLFSYLEGFPKPDPKYAETILAIPR 62

Query: 75  SISGKSISAKERKAGRVPSIVFEQEDGQHGGNKRLISVRTNQIVKLVKNLGRSFFLSRLF 134
           SISGKSISAKERKAGRVPSIVFEQEDGQHGGNKRLISVRTNQIVKLVKNLGRSFFLSRLF
Sbjct: 63  SISGKSISAKERKAGRVPSIVFEQEDGQHGGNKRLISVRTNQIVKLVKNLGRSFFLSRLF 122

Query: 135 DLEVLSDFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHAVLKVDVPLVFRGEDV 194
           DLEVLSDFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHAVLKVDVPLVFRGEDV
Sbjct: 123 DLEVLSDFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHAVLKVDVPLVFRGEDV 182

Query: 195 CPGLRKGSYLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLVKSK 254
           CPGLRKGSYLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLVKSK
Sbjct: 183 CPGLRKGSYLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLVKSK 242

Query: 255 DEPVCKIAGARVSDQQKKSK 273
           DEPVCKIAGARVSDQQKKSK
Sbjct: 243 DEPVCKIAGARVSDQQKKSK 260

[Close]

BLAST of CSPI03G38210 vs. ExPASy TrEMBL
Match: A0A5D3DPH9 (50S ribosomal protein L25 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007100 PE=4 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 1.4e-113
Identity = 220/260 (84.62%), Postives = 227/260 (87.31%), Query Frame = 0


Query: 15  RSYFTPTATATATATTAGGQFSVPSTSPA--SFHRSPHRRQLGFPKPDPKYAETILAIPR 74
           R Y +PT +            +  +T PA  S          GFPKPDPKYAETILAIPR
Sbjct: 3   RFYHSPTLSRVLLHRRFSSAATAIATDPALDSVSEPLFSYLEGFPKPDPKYAETILAIPR 62

Query: 75  SISGKSISAKERKAGRVPSIVFEQEDGQHGGNKRLISVRTNQIVKLVKNLGRSFFLSRLF 134
           S SGK+I AKERK GRVPSI+FEQEDGQHGGNKRLISVRTNQIVKLVKNLGRSFFLSRLF
Sbjct: 63  STSGKTICAKERKVGRVPSILFEQEDGQHGGNKRLISVRTNQIVKLVKNLGRSFFLSRLF 122

Query: 135 DLEVLSDFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHAVLKVDVPLVFRGEDV 194
           DLEVLSDFESGDIVEKVRVLPR+IHLHAGTDAPLNVTFIRAPSHAVLKVDVPLVFRGEDV
Sbjct: 123 DLEVLSDFESGDIVEKVRVLPRQIHLHAGTDAPLNVTFIRAPSHAVLKVDVPLVFRGEDV 182

Query: 195 CPGLRKGSYLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLVKSK 254
           CPGLRKGSYLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLVKSK
Sbjct: 183 CPGLRKGSYLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLVKSK 242

Query: 255 DEPVCKIAGARVSDQQKKSK 273
           DEPVCKIAGARVSDQQKKSK
Sbjct: 243 DEPVCKIAGARVSDQQKKSK 262

[Close]

BLAST of CSPI03G38210 vs. ExPASy TrEMBL
Match: A0A1S3B7N9 (50S ribosomal protein L25 OS=Cucumis melo OX=3656 GN=LOC103486925 PE=4 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 1.4e-113
Identity = 220/260 (84.62%), Postives = 227/260 (87.31%), Query Frame = 0


Query: 15  RSYFTPTATATATATTAGGQFSVPSTSPA--SFHRSPHRRQLGFPKPDPKYAETILAIPR 74
           R Y +PT +            +  +T PA  S          GFPKPDPKYAETILAIPR
Sbjct: 3   RFYHSPTLSRVLLHRRFSSAATAIATDPALDSVSEPLFSYLEGFPKPDPKYAETILAIPR 62

Query: 75  SISGKSISAKERKAGRVPSIVFEQEDGQHGGNKRLISVRTNQIVKLVKNLGRSFFLSRLF 134
           S SGK+I AKERK GRVPSI+FEQEDGQHGGNKRLISVRTNQIVKLVKNLGRSFFLSRLF
Sbjct: 63  STSGKTICAKERKVGRVPSILFEQEDGQHGGNKRLISVRTNQIVKLVKNLGRSFFLSRLF 122

Query: 135 DLEVLSDFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHAVLKVDVPLVFRGEDV 194
           DLEVLSDFESGDIVEKVRVLPR+IHLHAGTDAPLNVTFIRAPSHAVLKVDVPLVFRGEDV
Sbjct: 123 DLEVLSDFESGDIVEKVRVLPRQIHLHAGTDAPLNVTFIRAPSHAVLKVDVPLVFRGEDV 182

Query: 195 CPGLRKGSYLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLVKSK 254
           CPGLRKGSYLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLVKSK
Sbjct: 183 CPGLRKGSYLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLVKSK 242

Query: 255 DEPVCKIAGARVSDQQKKSK 273
           DEPVCKIAGARVSDQQKKSK
Sbjct: 243 DEPVCKIAGARVSDQQKKSK 262

[Close]

BLAST of CSPI03G38210 vs. ExPASy TrEMBL
Match: A0A6J1GGM6 (uncharacterized protein LOC111453766 OS=Cucurbita moschata OX=3662 GN=LOC111453766 PE=4 SV=1)

HSP 1 Score: 411.4 bits (1056), Expect = 3.0e-111
Identity = 204/218 (93.58%), Postives = 212/218 (97.25%), Query Frame = 0


Query: 55  GFPKPDPKYAETILAIPRSISGKSISAKERKAGRVPSIVFEQEDGQHGGNKRLISVRTNQ 114
           GFPKPDPKYAETILAIPRSISGK+ISAKERK GRVPSIVFEQEDGQHGGNKRLISVRTNQ
Sbjct: 43  GFPKPDPKYAETILAIPRSISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQ 102

Query: 115 IVKLVKNLGRSFFLSRLFDLEVLSDFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAP 174
           I KLV +LGRSFFLSRLFDLEV S+FESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAP
Sbjct: 103 IRKLVNHLGRSFFLSRLFDLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAP 162

Query: 175 SHAVLKVDVPLVFRGEDVCPGLRKGSYLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQK 234
           SHA+LKVDVPLVFRGEDVCPGLRKGSYLNTIKRTVKYLCPADI+PPYIDVDLSELDVGQK
Sbjct: 163 SHALLKVDVPLVFRGEDVCPGLRKGSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQK 222

Query: 235 LVMGDLKVHPALKLVKSKDEPVCKIAGARVSDQQKKSK 273
           LV GDLKVHPALKL++SKDEPVCKIAGAR SDQQ+KSK
Sbjct: 223 LVTGDLKVHPALKLLRSKDEPVCKIAGARASDQQRKSK 260

[Close]

BLAST of CSPI03G38210 vs. ExPASy TrEMBL
Match: A0A5A7UD34 (50S ribosomal protein L25 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold135G002340 PE=4 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 1.5e-110
Identity = 220/275 (80.00%), Postives = 227/275 (82.55%), Query Frame = 0


Query: 15  RSYFTPTATATATATTAGGQFSVPSTSPA--SFHRSPHRRQLGFPKPDPKYAETILAIPR 74
           R Y +PT +            +  +T PA  S          GFPKPDPKYAETILAIPR
Sbjct: 3   RFYHSPTLSRVLLHRRFSSAATAIATDPALDSVSEPLFSYLEGFPKPDPKYAETILAIPR 62

Query: 75  SISGKSISAKERKAGRVPSIVFEQEDGQHGGNKRLISVRTNQIVKLVKNLGRSFFLSRLF 134
           S SGK+I AKERK GRVPSI+FEQEDGQHGGNKRLISVRTNQIVKLVKNLGRSFFLSRLF
Sbjct: 63  STSGKTICAKERKVGRVPSILFEQEDGQHGGNKRLISVRTNQIVKLVKNLGRSFFLSRLF 122

Query: 135 DLEVLSDFESGDIVEKVRVLPR---------------KIHLHAGTDAPLNVTFIRAPSHA 194
           DLEVLSDFESGDIVEKVRVLPR               +IHLHAGTDAPLNVTFIRAPSHA
Sbjct: 123 DLEVLSDFESGDIVEKVRVLPRQLDNSHFELAPFMFVQIHLHAGTDAPLNVTFIRAPSHA 182

Query: 195 VLKVDVPLVFRGEDVCPGLRKGSYLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKLVM 254
           VLKVDVPLVFRGEDVCPGLRKGSYLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKLVM
Sbjct: 183 VLKVDVPLVFRGEDVCPGLRKGSYLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKLVM 242

Query: 255 GDLKVHPALKLVKSKDEPVCKIAGARVSDQQKKSK 273
           GDLKVHPALKLVKSKDEPVCKIAGARVSDQQKKSK
Sbjct: 243 GDLKVHPALKLVKSKDEPVCKIAGARVSDQQKKSK 277

[Close]

BLAST of CSPI03G38210 vs. NCBI nr
Match: XP_004136661.1 (uncharacterized protein LOC101205251 [Cucumis sativus] >KGN59487.1 hypothetical protein Csa_001495 [Cucumis sativus])

HSP 1 Score: 428.7 bits (1101), Expect = 3.7e-116
Identity = 227/260 (87.31%), Postives = 233/260 (89.62%), Query Frame = 0


Query: 15  RSYFTPTATATATATTAGGQFSVPSTSPA--SFHRSPHRRQLGFPKPDPKYAETILAIPR 74
           R Y +PT +       +    + P+T+PA  S          GFPKPDPKYAETILAIPR
Sbjct: 3   RFYRSPTLSRVLLRRYSAA--TAPATAPAFDSVSEPLFSYLEGFPKPDPKYAETILAIPR 62

Query: 75  SISGKSISAKERKAGRVPSIVFEQEDGQHGGNKRLISVRTNQIVKLVKNLGRSFFLSRLF 134
           SISGKSISAKERKAGRVPSIVFEQEDGQHGGNKRLISVRTNQIVKLVKNLGRSFFLSRLF
Sbjct: 63  SISGKSISAKERKAGRVPSIVFEQEDGQHGGNKRLISVRTNQIVKLVKNLGRSFFLSRLF 122

Query: 135 DLEVLSDFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHAVLKVDVPLVFRGEDV 194
           DLEVLSDFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHAVLKVDVPLVFRGEDV
Sbjct: 123 DLEVLSDFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHAVLKVDVPLVFRGEDV 182

Query: 195 CPGLRKGSYLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLVKSK 254
           CPGLRKGSYLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLVKSK
Sbjct: 183 CPGLRKGSYLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLVKSK 242

Query: 255 DEPVCKIAGARVSDQQKKSK 273
           DEPVCKIAGARVSDQQKKSK
Sbjct: 243 DEPVCKIAGARVSDQQKKSK 260

[Close]

BLAST of CSPI03G38210 vs. NCBI nr
Match: XP_008443303.1 (PREDICTED: 50S ribosomal protein L25 [Cucumis melo] >TYK25557.1 50S ribosomal protein L25 [Cucumis melo var. makuwa])

HSP 1 Score: 419.1 bits (1076), Expect = 3.0e-113
Identity = 220/260 (84.62%), Postives = 227/260 (87.31%), Query Frame = 0


Query: 15  RSYFTPTATATATATTAGGQFSVPSTSPA--SFHRSPHRRQLGFPKPDPKYAETILAIPR 74
           R Y +PT +            +  +T PA  S          GFPKPDPKYAETILAIPR
Sbjct: 3   RFYHSPTLSRVLLHRRFSSAATAIATDPALDSVSEPLFSYLEGFPKPDPKYAETILAIPR 62

Query: 75  SISGKSISAKERKAGRVPSIVFEQEDGQHGGNKRLISVRTNQIVKLVKNLGRSFFLSRLF 134
           S SGK+I AKERK GRVPSI+FEQEDGQHGGNKRLISVRTNQIVKLVKNLGRSFFLSRLF
Sbjct: 63  STSGKTICAKERKVGRVPSILFEQEDGQHGGNKRLISVRTNQIVKLVKNLGRSFFLSRLF 122

Query: 135 DLEVLSDFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHAVLKVDVPLVFRGEDV 194
           DLEVLSDFESGDIVEKVRVLPR+IHLHAGTDAPLNVTFIRAPSHAVLKVDVPLVFRGEDV
Sbjct: 123 DLEVLSDFESGDIVEKVRVLPRQIHLHAGTDAPLNVTFIRAPSHAVLKVDVPLVFRGEDV 182

Query: 195 CPGLRKGSYLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLVKSK 254
           CPGLRKGSYLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLVKSK
Sbjct: 183 CPGLRKGSYLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLVKSK 242

Query: 255 DEPVCKIAGARVSDQQKKSK 273
           DEPVCKIAGARVSDQQKKSK
Sbjct: 243 DEPVCKIAGARVSDQQKKSK 262

[Close]

BLAST of CSPI03G38210 vs. NCBI nr
Match: XP_023538842.1 (uncharacterized protein LOC111799648 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 412.5 bits (1059), Expect = 2.8e-111
Identity = 205/218 (94.04%), Postives = 212/218 (97.25%), Query Frame = 0


Query: 55  GFPKPDPKYAETILAIPRSISGKSISAKERKAGRVPSIVFEQEDGQHGGNKRLISVRTNQ 114
           GFPKPDPKYAETILAIPRSISGK+ISAKERK GRVPSIVFEQEDGQHGGNKRLISVRTNQ
Sbjct: 43  GFPKPDPKYAETILAIPRSISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQ 102

Query: 115 IVKLVKNLGRSFFLSRLFDLEVLSDFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAP 174
           I KLV +LGRSFFLSRLFDLEV S+FESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAP
Sbjct: 103 IRKLVNHLGRSFFLSRLFDLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAP 162

Query: 175 SHAVLKVDVPLVFRGEDVCPGLRKGSYLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQK 234
           SHA+LKVDVPLVFRGEDVCPGLRKGSYLNTIKRTVKYLCPADI+PPYIDVDLSELDVGQK
Sbjct: 163 SHALLKVDVPLVFRGEDVCPGLRKGSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQK 222

Query: 235 LVMGDLKVHPALKLVKSKDEPVCKIAGARVSDQQKKSK 273
           LV GDLKVHPALKL++SKDEPVCKIAGAR SDQQKKSK
Sbjct: 223 LVTGDLKVHPALKLLRSKDEPVCKIAGARASDQQKKSK 260

[Close]

BLAST of CSPI03G38210 vs. NCBI nr
Match: XP_038903089.1 (50S ribosomal protein L25 [Benincasa hispida])

HSP 1 Score: 412.1 bits (1058), Expect = 3.6e-111
Identity = 214/260 (82.31%), Postives = 228/260 (87.69%), Query Frame = 0


Query: 15  RSYFTPTATATATATTAGGQFSVPSTSPA--SFHRSPHRRQLGFPKPDPKYAETILAIPR 74
           R Y +PT +          +FS  +T+P   S+   P     GFPKPDPKYAETILAIPR
Sbjct: 3   RFYHSPTLSRVLR------RFSSAATAPVLDSYSEPPLSYLEGFPKPDPKYAETILAIPR 62

Query: 75  SISGKSISAKERKAGRVPSIVFEQEDGQHGGNKRLISVRTNQIVKLVKNLGRSFFLSRLF 134
           SISGK+ISAKERK GR PSIVFEQEDGQHGGNKRLISVRTNQI KLV +LGRSFFLSRLF
Sbjct: 63  SISGKNISAKERKVGRTPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRLF 122

Query: 135 DLEVLSDFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHAVLKVDVPLVFRGEDV 194
           DLEV S+FESGDIVEKVRVLPRKIHLH+GTDAPLNVTFIRAPSHA+LKVDVPLVFRGEDV
Sbjct: 123 DLEVRSEFESGDIVEKVRVLPRKIHLHSGTDAPLNVTFIRAPSHALLKVDVPLVFRGEDV 182

Query: 195 CPGLRKGSYLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLVKSK 254
           CPGLRKGSYLNTIKRTVKYLCPADI+PPYIDVDLSELDVGQKLVMGDLKVHPALKL++SK
Sbjct: 183 CPGLRKGSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSK 242

Query: 255 DEPVCKIAGARVSDQQKKSK 273
           DEPVCKIAGAR SDQQKKSK
Sbjct: 243 DEPVCKIAGARASDQQKKSK 256

[Close]

BLAST of CSPI03G38210 vs. NCBI nr
Match: XP_022950760.1 (uncharacterized protein LOC111453766 [Cucurbita moschata] >KAG6596970.1 hypothetical protein SDJN03_10150, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028444.1 rplY [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 411.4 bits (1056), Expect = 6.2e-111
Identity = 204/218 (93.58%), Postives = 212/218 (97.25%), Query Frame = 0


Query: 55  GFPKPDPKYAETILAIPRSISGKSISAKERKAGRVPSIVFEQEDGQHGGNKRLISVRTNQ 114
           GFPKPDPKYAETILAIPRSISGK+ISAKERK GRVPSIVFEQEDGQHGGNKRLISVRTNQ
Sbjct: 43  GFPKPDPKYAETILAIPRSISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQ 102

Query: 115 IVKLVKNLGRSFFLSRLFDLEVLSDFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAP 174
           I KLV +LGRSFFLSRLFDLEV S+FESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAP
Sbjct: 103 IRKLVNHLGRSFFLSRLFDLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAP 162

Query: 175 SHAVLKVDVPLVFRGEDVCPGLRKGSYLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQK 234
           SHA+LKVDVPLVFRGEDVCPGLRKGSYLNTIKRTVKYLCPADI+PPYIDVDLSELDVGQK
Sbjct: 163 SHALLKVDVPLVFRGEDVCPGLRKGSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQK 222

Query: 235 LVMGDLKVHPALKLVKSKDEPVCKIAGARVSDQQKKSK 273
           LV GDLKVHPALKL++SKDEPVCKIAGAR SDQQ+KSK
Sbjct: 223 LVTGDLKVHPALKLLRSKDEPVCKIAGARASDQQRKSK 260

[Close]

BLAST of CSPI03G38210 vs. TAIR 10
Match: AT4G23620.1 (Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain )

HSP 1 Score: 358.2 bits (918), Expect = 5.8e-99
Identity = 172/217 (79.26%), Postives = 200/217 (92.17%), Query Frame = 0


Query: 55  GFPKPDPKYAETILAIPRSISGKSISAKERKAGRVPSIVFEQEDGQHGGNKRLISVRTNQ 114
           GFP+PDPK+AETILA+PRS+SGKSISAKERKAGRVPSI+FEQEDGQHGGNKRLISV+TNQ
Sbjct: 42  GFPRPDPKHAETILAVPRSVSGKSISAKERKAGRVPSIIFEQEDGQHGGNKRLISVQTNQ 101

Query: 115 IVKLVKNLGRSFFLSRLFDLEVLSDFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAP 174
           I KLV +LG SFFLSRLFD+EV ++  S +++EKVR LPR IHLH+GTDAPLNVTFIRAP
Sbjct: 102 IRKLVNHLGYSFFLSRLFDVEVRAEIGSDEVIEKVRALPRAIHLHSGTDAPLNVTFIRAP 161

Query: 175 SHAVLKVDVPLVFRGEDVCPGLRKGSYLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQK 234
             A+LKVD+PLVF G+DV PGL+KG+ LNTIKRTVK+LCPA+IIPPYI+VDLS+LD+GQK
Sbjct: 162 PGALLKVDIPLVFIGDDVSPGLKKGASLNTIKRTVKFLCPAEIIPPYIEVDLSQLDIGQK 221

Query: 235 LVMGDLKVHPALKLVKSKDEPVCKIAGARVSDQQKKS 272
           LVMGDLKVHPALKL+KSKDEP+ K+AG RV+D QKKS
Sbjct: 222 LVMGDLKVHPALKLIKSKDEPIVKVAGGRVTDTQKKS 258

[Close]

BLAST of CSPI03G38210 vs. TAIR 10
Match: AT4G23620.2 (Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain )

HSP 1 Score: 351.3 bits (900), Expect = 7.1e-97
Identity = 173/230 (75.22%), Postives = 201/230 (87.39%), Query Frame = 0


Query: 55  GFPKPDPKYAETILAIPRSISGKSISAKERKAGRVPSIVFEQEDGQHGGNKRLISVRTNQ 114
           GFP+PDPK+AETILA+PRS+SGKSISAKERKAGRVPSI+FEQEDGQHGGNKRLISV+TNQ
Sbjct: 42  GFPRPDPKHAETILAVPRSVSGKSISAKERKAGRVPSIIFEQEDGQHGGNKRLISVQTNQ 101

Query: 115 IVKLVKNLGRSFFLSRLFDLEVLSDFESGDIVEKVRVLPR-------------KIHLHAG 174
           I KLV +LG SFFLSRLFD+EV ++  S +++EKVR LPR             KIHLH+G
Sbjct: 102 IRKLVNHLGYSFFLSRLFDVEVRAEIGSDEVIEKVRALPRAVKSPFLSLMKLIKIHLHSG 161

Query: 175 TDAPLNVTFIRAPSHAVLKVDVPLVFRGEDVCPGLRKGSYLNTIKRTVKYLCPADIIPPY 234
           TDAPLNVTFIRAP  A+LKVD+PLVF G+DV PGL+KG+ LNTIKRTVK+LCPA+IIPPY
Sbjct: 162 TDAPLNVTFIRAPPGALLKVDIPLVFIGDDVSPGLKKGASLNTIKRTVKFLCPAEIIPPY 221

Query: 235 IDVDLSELDVGQKLVMGDLKVHPALKLVKSKDEPVCKIAGARVSDQQKKS 272
           I+VDLS+LD+GQKLVMGDLKVHPALKL+KSKDEP+ K+AG RV+D QKKS
Sbjct: 222 IEVDLSQLDIGQKLVMGDLKVHPALKLIKSKDEPIVKVAGGRVTDTQKKS 271

[Close]

BLAST of CSPI03G38210 vs. TAIR 10
Match: AT5G66860.1 (Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain )

HSP 1 Score: 160.6 bits (405), Expect = 1.8e-39
Identity = 87/202 (43.07%), Postives = 127/202 (62.87%), Query Frame = 0


Query: 65  ETILAIPRSISGKSISAKERKAGRVPSIVFEQE----DGQHGG--NKRLISVRTNQIVKL 124
           +TI AIPR  +G+ +SA++R  GR+P++VF Q     D    G   K+L++    QI  +
Sbjct: 34  QTIQAIPREATGRGVSARDRTIGRIPAVVFPQSLLDTDASKRGVSRKQLLTADKKQIKSI 93

Query: 125 VKNLGRSFFLSRLFDLEVLSDFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHAV 184
           + ++G  FF S  F L++ +   S  +VE  RVLP K+H    T   LN+ F+ A     
Sbjct: 94  IDSVGLPFFCSTTFQLQIRAGQGSSTLVESGRVLPLKVHRDEETGKILNLVFVWADDGEK 153

Query: 185 LKVDVPLVFRGEDVCPGLRKGSYLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKLVMG 244
           LKVDVP+VF+G D CPGL+KG  L TI+ T+K L PA+ IP  I+VD+S LD+  K+++ 
Sbjct: 154 LKVDVPVVFKGLDHCPGLQKGGNLRTIRSTLKLLGPAEHIPSKIEVDVSNLDIEDKVLLQ 213

Query: 245 DLKVHPALKLV-KSKDEPVCKI 260
           D+  HP+LKL+ K++  PVCKI
Sbjct: 214 DVVFHPSLKLLSKNETMPVCKI 235

The following BLAST results are available for this feature:

BLAST of CSPI03G38210 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2ISF7	1.4e-20	33.87	50S ribosomal protein L25 OS=Rhodopseudomonas palustris (strain HaA2) OX=316058 ...	[more]
Q6N1P8	4.0e-20	33.87	50S ribosomal protein L25 OS=Rhodopseudomonas palustris (strain ATCC BAA-98 / CG...	[more]
Q219F9	4.0e-20	30.27	50S ribosomal protein L25 OS=Rhodopseudomonas palustris (strain BisB18) OX=31605...	[more]
B3Q7X4	4.0e-20	33.87	50S ribosomal protein L25 OS=Rhodopseudomonas palustris (strain TIE-1) OX=395960...	[more]
A8HS67	2.6e-19	30.89	50S ribosomal protein L25 OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5...	[more]

BLAST of CSPI03G38210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LFM4	1.8e-116	87.31	Ribosomal_TL5_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G82...	[more]
A0A5D3DPH9	1.4e-113	84.62	50S ribosomal protein L25 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3B7N9	1.4e-113	84.62	50S ribosomal protein L25 OS=Cucumis melo OX=3656 GN=LOC103486925 PE=4 SV=1	[more]
A0A6J1GGM6	3.0e-111	93.58	uncharacterized protein LOC111453766 OS=Cucurbita moschata OX=3662 GN=LOC1114537...	[more]
A0A5A7UD34	1.5e-110	80.00	50S ribosomal protein L25 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]

BLAST of CSPI03G38210 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136661.1	3.7e-116	87.31	uncharacterized protein LOC101205251 [Cucumis sativus] >KGN59487.1 hypothetical ...	[more]
XP_008443303.1	3.0e-113	84.62	PREDICTED: 50S ribosomal protein L25 [Cucumis melo] >TYK25557.1 50S ribosomal pr...	[more]
XP_023538842.1	2.8e-111	94.04	uncharacterized protein LOC111799648 [Cucurbita pepo subsp. pepo]	[more]
XP_038903089.1	3.6e-111	82.31	50S ribosomal protein L25 [Benincasa hispida]	[more]
XP_022950760.1	6.2e-111	93.58	uncharacterized protein LOC111453766 [Cucurbita moschata] >KAG6596970.1 hypothet...	[more]

BLAST of CSPI03G38210 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23620.1	5.8e-99	79.26	Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain	[more]
AT4G23620.2	7.1e-97	75.22	Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain	[more]
AT5G66860.1	1.8e-39	43.07	Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR037121	Ribosomal protein L25, C-terminal	GENE3D	2.170.120.20	Ribosomal protein L25, beta domain	coord: 176..268 e-value: 7.6E-18 score: 66.6
IPR020056	Ribosomal protein L25/Gln-tRNA synthetase, N-terminal	GENE3D	2.40.240.10	Ribosomal Protein L25; Chain P	coord: 64..173 e-value: 5.4E-8 score: 34.8
IPR029751	Ribosomal protein L25	PFAM	PF01386	Ribosomal_L25p	coord: 69..170 e-value: 4.9E-9 score: 36.6
IPR029751	Ribosomal protein L25	CDD	cd00495	Ribosomal_L25_TL5_CTC	coord: 66..172 e-value: 5.76657E-13 score: 61.3322
IPR020057	Ribosomal protein L25, beta domain	PFAM	PF14693	Ribosomal_TL5_C	coord: 179..262 e-value: 5.4E-21 score: 74.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..47
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..58
None	No IPR available	PANTHER	PTHR33284	RIBOSOMAL PROTEIN L25/GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEIN	coord: 43..270
None	No IPR available	PANTHER	PTHR33284:SF4	BNAA01G13300D PROTEIN	coord: 43..270
IPR011035	Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily	SUPERFAMILY	50715	Ribosomal protein L25-like	coord: 72..261

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G38210.1	CSPI03G38210.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0008097	5S rRNA binding
molecular_function	GO:0004812	aminoacyl-tRNA ligase activity
molecular_function	GO:0003735	structural constituent of ribosome