CSPI03G37180 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI03G37180
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr3: 32260625 .. 32263317 (+)
RNA-Seq ExpressionCSPI03G37180
SyntenyCSPI03G37180
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGTACAGGTTGGGATCAAACCTTCCACTTAATATGAACATATTTTCGTTTTCCTTTTTGAAGCTCAAATTTGATGAATTAGTAGTAGACACATGTCTTCATTTCCTTCTTGACTTTCCTACTCCTAACGAAATTACGATAATCGATGTTGTACCCCCCGATCTGGTTTTTGGTCCTCACAGCTCCATGAATTGAAAACCGTTCAAGTGATTTGTATGATTTTAACACATCATCATTCCATTCGATGGGACAATCGATGATTTCCAAAACTCTTAGGGTTTCGGTGAATCTTTGAGTCCATTCCGGCAATTTTTTCACTATTGGAAGCTCTCTGATTGTGAACCTCTGAAGCCTGAACTCCACTCCTTTCAACGTCAGTGTAAGTTTTTTGCAACTCCAAATCACCAAATTCTTTAGTGATATTAGCGATCCTATCTCGTTTGGCAACGATTTCAATGTCTTACAATCGTAAATCATTAGGGTTTCTAGGCGTACGAGGCATGACGGCTTTTTGAATAGATCTTGTAGGTTTTGGCACCCTCCAATTGCGAGAAATCGAAGAGAAGTCATGGTTCCAACTCCATTTTTGTGCAGACGAAGGTTGTTTGCTGTTACCCAGAGGTATCTCAGGTTGGTCAATTGCCTAATATCATTGGGCAGTTCTTTAAGTGCGGAACAGGATGCAAGAATCAAGGTTTGTAAATTTTTTAGCTTGAAGATTGAATTTGGTAGCCGCTTGATTTTCTTATTCCCTTGCAAGTCTAGGTATCTGAGCTGTACCAGATTTTCTACAGCACTTGGAATTTCCTGTAGATTTGCATTGCCTAAATGCAATAGTCTTAAGTATTTGAACTTGTCGATGCATGCATTTGCTAGGAATGCACTAGGGGGCACCTTATCTCTTATTGTGAAGGCTATAGATTGGGTTTTTGTGACTTCGAATACCTGTTTTTGTGTGAGTAGACGTGCAAGTTTTTCAATGAGAGGGTGCAATTTAAACCAATAGCCAAAACCATATTCCTCTAGTTCTTGTAGGAAACATCTTGAGCATAGTTCCTTGAAACAATTCTCACCTATTTTTTCCAAAGATAAGTAATTCTCTTTGGGTAGGAGGTCGCTTGCAATCCATAATTGAATCACATCATTGGAAGACAATATGCGATCTTTTTTTAATTGGGAACAATAAAGAAAACAACGTTGTAGGTGTGAAGGCATTTGATCATAGCATAATCTAAGTGTAGGTAAAATACTCTTATTCCCATCCTCCTCTTCCTCATGTTCCCATAACTCATCGATGACACCGTTCCACTCAGCTATACTAGTTTTTGATAGCAGACCCCCCAGGCACTTTATTGCCAAAGGAACCCCATGACATTTCTGCTCAATTACTTCTTGTATTTTTGTGAGATTTGGGATTTGTGCTTCCTGTGTTTCTGTGAAAGCATGAACTTTGAACAAAGACAATGAATTTTCCTTTGACAACCTCTCAACTTTGAAAATTGTTTGATGTTTCATATTATCCTTGTTAACATCTGAAGGTTTTGTGGCTTCTGGGGATGGAACTACCTGGCTCTCGTTCTTGTAGAGTTTTTTTAGTCCGACAGCATCAGCTATTTTCTCATTCTGAGTGGTCACTATGATTTTGCTGCCACGGTTTCCCATCCCCAATAAACTTTGAAATATGGAGCAATTACCAAGGTTTTTGATTGAAATATCTTGAAAAACAATCAGAAATTTTTTATCCCTCAGAAATTGTTGAACTGCAAAGCACAATTGTTTCTCAGTCAAGTTATCACATGTTACTTGGCAATGTGAAAAACTGAGCATCTCTTTTATCAATCTCTGTGGATCAAATTCCTCTTTCACACAAATCCACAATCTTGATGGAAACGTGTTCACCAGATTGTTGTAAAAGAATTTGGCAAGTGTGGTCTTACCTATGCCTGGTTCTCCAACTATGTGGAAGAGCCCGTGAGTAGATTTTTTGAAATGATCCAGAAAGTTATGATATCGTTTGTCTTGGAAAACCTTGGGAGCATTAGTCAACGAGTAAAGCAATTGCCAACTTGGTTTCATGAGTCTTGTCGAAACTTCAGTAGCACTAAGAAAGGAGTGTGTTGTCTCCATGTTTGTTAGATTGAAGCCATACATATGGGATGCAATTTCATCCAAATCGTCGCATAGTTTCATCATTTTTTTAGTTTGATCAATTTGACTGAAGTTAAAGGAAGGAAGAAATACCCATTTTCCAGTAGCCTCTTGTTTTTTGACTTCCCTATTGGATTCATATAGCAATTCCTCAATTTGTAAAAATACACTTTGAAGCTTCTGTAGCCAATCATTTAGACAATGACGATATTCTTCCTTTTCAGCATCCTTAAGAATTGTTTTAAGGCTCAACATGGTATACTGCATTCGTCTCAGGTACATTGGGAATTTTTTTAGCTCTATCAAGATATTTTCTGCTTGCTCATAGATGCAACAAGCCATTCGTATATATTTGGAATATGTCGTTTCTCTTCCTTTCAATTCGTTGAGTTTGAATGATCTATAGATGAAGACAGTTATATAGCACCTACCCATGGATTCGTTGCATTATCAAAAAGCAAAGTAGCATTAAAACTTACTTTTCTTTTGGGGAAATGTATATATTAGAATAGGGACACTTACGCAAGTATGTACAAATACTTGTAT

mRNA sequence

AGTACAGGTTGGGATCAAACCTTCCACTTAATATGAACATATTTTCGTTTTCCTTTTTGAAGCTCAAATTTGATGAATTAGTAGTAGACACATGTCTTCATTTCCTTCTTGACTTTCCTACTCCTAACGAAATTACGATAATCGATGTTGTACCCCCCGATCTGGTTTTTGGTCCTCACAGCTCCATGAATTGAAAACCGTTCAAGTGATTTGTATGATTTTAACACATCATCATTCCATTCGATGGGACAATCGATGATTTCCAAAACTCTTAGGGTTTCGGTGAATCTTTGAGTCCATTCCGGCAATTTTTTCACTATTGGAAGCTCTCTGATTGTGAACCTCTGAAGCCTGAACTCCACTCCTTTCAACGTCAGTGTTTTGGCACCCTCCAATTGCGAGAAATCGAAGAGAAGTCATGGTTCCAACTCCATTTTTGTGCAGACGAAGGTTGTTTGCTGTTACCCAGAGGTATCTCAGGTTGGTCAATTGCCTAATATCATTGGGCAGTTCTTTAAGTGCGGAACAGGATGCAAGAATCAAGGTTTGTAAATTTTTTAGCTTGAAGATTGAATTTGGTAGCCGCTTGATTTTCTTATTCCCTTGCAAGTCTAGGTATCTGAGCTGTACCAGATTTTCTACAGCACTTGGAATTTCCTGTAGATTTGCATTGCCTAAATGCAATAGTCTTAAGTATTTGAACTTGTCGATGCATGCATTTGCTAGGAATGCACTAGGGGGCACCTTATCTCTTATTGTGAAGGCTATAGATTGGGTTTTTGTGACTTCGAATACCTGTTTTTGTGTGAGTAGACGTGCAAGTTTTTCAATGAGAGGGTGCAATTTAAACCAATAGCCAAAACCATATTCCTCTAGTTCTTGTAGGAAACATCTTGAGCATAGTTCCTTGAAACAATTCTCACCTATTTTTTCCAAAGATAAGTAATTCTCTTTGGGTAGGAGGTCGCTTGCAATCCATAATTGAATCACATCATTGGAAGACAATATGCGATCTTTTTTTAATTGGGAACAATAAAGAAAACAACGTTGTAGGTGTGAAGGCATTTGATCATAGCATAATCTAAGTGTAGGTAAAATACTCTTATTCCCATCCTCCTCTTCCTCATGTTCCCATAACTCATCGATGACACCGTTCCACTCAGCTATACTAGTTTTTGATAGCAGACCCCCCAGGCACTTTATTGCCAAAGGAACCCCATGACATTTCTGCTCAATTACTTCTTGTATTTTTGTGAGATTTGGGATTTGTGCTTCCTGTGTTTCTGTGAAAGCATGAACTTTGAACAAAGACAATGAATTTTCCTTTGACAACCTCTCAACTTTGAAAATTGTTTGATGTTTCATATTATCCTTGTTAACATCTGAAGGTTTTGTGGCTTCTGGGGATGGAACTACCTGGCTCTCGTTCTTGTAGAGTTTTTTTAGTCCGACAGCATCAGCTATTTTCTCATTCTGAGTGGTCACTATGATTTTGCTGCCACGGTTTCCCATCCCCAATAAACTTTGAAATATGGAGCAATTACCAAGGTTTTTGATTGAAATATCTTGAAAAACAATCAGAAATTTTTTATCCCTCAGAAATTGTTGAACTGCAAAGCACAATTGTTTCTCAGTCAAGTTATCACATGTTACTTGGCAATGTGAAAAACTGAGCATCTCTTTTATCAATCTCTGTGGATCAAATTCCTCTTTCACACAAATCCACAATCTTGATGGAAACGTGTTCACCAGATTGTTGTAAAAGAATTTGGCAAGTGTGGTCTTACCTATGCCTGGTTCTCCAACTATGTGGAAGAGCCCGTGAGTAGATTTTTTGAAATGATCCAGAAAGTTATGATATCGTTTGTCTTGGAAAACCTTGGGAGCATTAGTCAACGAGTAAAGCAATTGCCAACTTGGTTTCATGAGTCTTGTCGAAACTTCAGTAGCACTAAGAAAGGAGTGTGTTGTCTCCATGTTTGTTAGATTGAAGCCATACATATGGGATGCAATTTCATCCAAATCGTCGCATAGTTTCATCATTTTTTTAGTTTGATCAATTTGACTGAAGTTAAAGGAAGGAAGAAATACCCATTTTCCAGTAGCCTCTTGTTTTTTGACTTCCCTATTGGATTCATATAGCAATTCCTCAATTTGTAAAAATACACTTTGAAGCTTCTGTAGCCAATCATTTAGACAATGACGATATTCTTCCTTTTCAGCATCCTTAAGAATTGTTTTAAGGCTCAACATGGTATACTGCATTCGTCTCAGGTACATTGGGAATTTTTTTAGCTCTATCAAGATATTTTCTGCTTGCTCATAGATGCAACAAGCCATTCGTATATATTTGGAATATGTCGTTTCTCTTCCTTTCAATTCGTTGAGTTTGAATGATCTATAGATGAAGACAGTTATATAGCACCTACCCATGGATTCGTTGCATTATCAAAAAGCAAAGTAGCATTAAAACTTACTTTTCTTTTGGGGAAATGTATATATTAGAATAGGGACACTTACGCAAGTATGTACAAATACTTGTAT

Coding sequence (CDS)

ATGGTTCCAACTCCATTTTTGTGCAGACGAAGGTTGTTTGCTGTTACCCAGAGGTATCTCAGGTTGGTCAATTGCCTAATATCATTGGGCAGTTCTTTAAGTGCGGAACAGGATGCAAGAATCAAGGTTTGTAAATTTTTTAGCTTGAAGATTGAATTTGGTAGCCGCTTGATTTTCTTATTCCCTTGCAAGTCTAGGTATCTGAGCTGTACCAGATTTTCTACAGCACTTGGAATTTCCTGTAGATTTGCATTGCCTAAATGCAATAGTCTTAAGTATTTGAACTTGTCGATGCATGCATTTGCTAGGAATGCACTAGGGGGCACCTTATCTCTTATTGTGAAGGCTATAGATTGGGTTTTTGTGACTTCGAATACCTGTTTTTGTGTGAGTAGACGTGCAAGTTTTTCAATGAGAGGGTGCAATTTAAACCAATAG

Protein sequence

MVPTPFLCRRRLFAVTQRYLRLVNCLISLGSSLSAEQDARIKVCKFFSLKIEFGSRLIFLFPCKSRYLSCTRFSTALGISCRFALPKCNSLKYLNLSMHAFARNALGGTLSLIVKAIDWVFVTSNTCFCVSRRASFSMRGCNLNQ*
Homology
[Close]
BLAST of CSPI03G37180 vs. ExPASy TrEMBL
Match: A0A0A0LC31 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G814395 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 9.2e-75
Identity = 143/145 (98.62%), Postives = 144/145 (99.31%), Query Frame = 0 

Query: 1   MVPTPFLCRRRLFAVTQRYLRLVNCLISLGSSLSAEQDARIKVCKFFSLKIEFGSRLIFL 60
           MVPTPFLCRRRLFAVTQRYLRLVNCLISLGSSLSAEQDARIKVCKFFSLKIEFGSRLIFL
Sbjct: 1   MVPTPFLCRRRLFAVTQRYLRLVNCLISLGSSLSAEQDARIKVCKFFSLKIEFGSRLIFL 60

Query: 61  FPCKSRYLSCTRFSTALGISCRFALPKCNSLKYLNLSMHAFARNALGGTLSLIVKAIDWV 120
           FPCKSRYLSCTRFSTALGI CRFALPKCNSLKYLNLSMHAFARNALGGTLSLIVKAIDWV
Sbjct: 61  FPCKSRYLSCTRFSTALGIPCRFALPKCNSLKYLNLSMHAFARNALGGTLSLIVKAIDWV 120

Query: 121 FVTSNTCFCVSRRASFSMRGCNLNQ 146
           FVTSNTCFCVSRRASFS+RGCNLNQ
Sbjct: 121 FVTSNTCFCVSRRASFSIRGCNLNQ 145

[Close]
BLAST of CSPI03G37180 vs. ExPASy TrEMBL
Match: A0A0A0LH56 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G815405 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.9e-24
Identity = 68/112 (60.71%), Postives = 74/112 (66.07%), Query Frame = 0 

Query: 1   MVPTPFLCRRRLFAVTQRYLRLVNCLISLGSSLSAEQDARIKVCKFFSLKIEFGSRLIFL 60
           MVPTPFL RR LF VT +YLRL+  LISLG S SAEQD RIKVCK   L IEFG  LIF+
Sbjct: 9   MVPTPFLSRRSLFVVTHKYLRLIKFLISLGRSSSAEQDPRIKVCKLCRLHIEFGRCLIFV 68

Query: 61  FPCKSRYLSCTRFSTALGISCRFALPKCNSLKYLNLSMHAFARNALGGTLSL 113
            PCKSRYL         GISCR AL K N+L  L   MH   R+ALG T+ L
Sbjct: 69  LPCKSRYLRYLSVPMEFGISCRSALLKYNNLNPLYFQMHFSVRDALGSTIFL 120

The following BLAST results are available for this feature:
BLAST of CSPI03G37180 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI03G37180 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LC319.2e-7598.62Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G814395 PE=4 SV=1[more]
A0A0A0LH561.9e-2460.71Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G815405 PE=4 SV=1[more]
BLAST of CSPI03G37180 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
BLAST of CSPI03G37180 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G37180.2CSPI03G37180.2mRNA
CSPI03G37180.1CSPI03G37180.1mRNA