CSPI03G36660 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI03G36660
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr3: 31831070 .. 31832542 (+)
RNA-Seq ExpressionCSPI03G36660
SyntenyCSPI03G36660
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AGTTCCCCAAATCACACGGAGAGAGAGGAGGAGGAAGAAGAAGAAGAAGATAGAAGGAGGGTTGTTGATTCTCCGTTATATTATATGTATATGTGTGTGTGTGTATAAATAATTATTAAGCTCAAAGCAACAGAGAAATCCATGGCACCTGTGAGCTCCAATGGTGGTCCTTCACACGCTTCATTTGGGTCCCTCCACCTTCCATACTAAATACTCTACTCCACACCACAACCCCTTCTAACCATTTCTGTATATTTCTCGCAGATTCATCAGATCCCAACCCATAAAGCAATTCTGCAAAAAGCAAAAGCACTTCTGCTCTGCTAACCCTTCTTTCCTTTCCTTTTTCTCCTCGTTTTCCCTCTTTATCCTCCTCATCCCCCCTTCTCTTCCTTATCTCTTTGGAACTTCAGCATTTTTCTTTTCCTCAACTGGGTTTCTCTTGCCGATCATTCTTTTCTCATCATACTTGCTGTCCTCTCATCATTCGCCTTCACCCCATTTTAGGTACTCTCTCAATCTCAAATGGGTTTGCATTATCGTTTTGGTTTTCGTCTGAAATGCTTGCTTTGATTAGTTTTTTTTTTTCCCCATTTTGTGTATGTAATGTTTTTCTTTTGGGTTTTGTGTTGGGGATATGATTTTTGTTGTTGGTGGTGGTTTTGAACTTTAATGCCCTGTTTTTCTCTGACTCTGTTTCTTGGGAAATTTTTTGAAGATGAAATTGTATTTTGGGTTTTGTGGGTTTTCAAACTAAACCCTGACTGATGTATAGAGAGTTCTCGAAACCCAAATGGTTGTTTTGGGGTATGGCGTAATTAGCATTACATACGAAGGTCTATTTTGTTTCCAGAAAATGACGAACTCACCGCTACTTTCATGGCTGTGTTTTTGTTTTTGTCCTTTATTGTGGACGATAACGTAATAACTTCAGCTTTAACCAGCATTTCTCTTTTGCATTTTTTTAAAAAAAAATTGGTGGAGTTTTTAGAAGAAAGCCCTTCTTCTTCCTTGTTTCTGATTGTTTTTCTTTTTTCTTCTTATGGAAGTACGAACTCTTCTCTGCGCATTAGTTAAACTTGTGATGTCTCTGTCTTGGAATGTTCAGGGTTCTGGCACTTAGATCTGAAACCGTCCGACAAGAACTGTTTGGATTTCTATGTACTACTTTTGAGGTAATATTATTTTATGAGGTTCTAAGATCTATGTCTTTTCTTATTCCATTTGAGTTGGTGGTATTCAAAATAGCTTGGGATATGTTAGCTACTTTTGTTTTGTTTAATTTGGTGAGTTCGAAGCAGCATGTCTGTATGTGGAACTGCTAATATTTTGAGGCTTTTAAGAAACTTTGATTTAAAATTTCCATAGTTTGAGGCAATCTTTAGTCTATTCACTTATTGTAACGGCTAGCTGATTCTGTTTTAATTTATTATCTTCTTCCCTATTTTATAGGCTTCTGAGAACTATTTGACA

mRNA sequence

AGTTCCCCAAATCACACGGAGAGAGAGGAGGAGGAAGAAGAAGAAGAAGATAGAAGGAGGGTTGTTGATTCTCCATTCATCAGATCCCAACCCATAAAGCAATTCTGCAAAAAGCAAAAGCACTTCTGCTCTGCTAACCCTTCTTTCCTTTCCTTTTTCTCCTCGTTTTCCCTCTTTATCCTCCTCATCCCCCCTTCTCTTCCTTATCTCTTTGGAACTTCAGCATTTTTCTTTTCCTCAACTGGGTTTCTCTTGCCGATCATTCTTTTCTCATCATACTTGCTGTCCTCTCATCATTCGCCTTCACCCCATTTTAGGGTTCTGGCACTTAGATCTGAAACCGTCCGACAAGAACTGTTTGGATTTCTATGTACTACTTTTGAGGCTTCTGAGAACTATTTGACA

Coding sequence (CDS)

AGTTCCCCAAATCACACGGAGAGAGAGGAGGAGGAAGAAGAAGAAGAAGATAGAAGGAGGGTTGTTGATTCTCCATTCATCAGATCCCAACCCATAAAGCAATTCTGCAAAAAGCAAAAGCACTTCTGCTCTGCTAACCCTTCTTTCCTTTCCTTTTTCTCCTCGTTTTCCCTCTTTATCCTCCTCATCCCCCCTTCTCTTCCTTATCTCTTTGGAACTTCAGCATTTTTCTTTTCCTCAACTGGGTTTCTCTTGCCGATCATTCTTTTCTCATCATACTTGCTGTCCTCTCATCATTCGCCTTCACCCCATTTTAGGGTTCTGGCACTTAGATCTGAAACCGTCCGACAAGAACTGTTTGGATTTCTATGTACTACTTTTGAGGCTTCTGAGAACTATTTGACA

Protein sequence

SSPNHTEREEEEEEEEDRRRVVDSPFIRSQPIKQFCKKQKHFCSANPSFLSFFSSFSLFILLIPPSLPYLFGTSAFFFSSTGFLLPIILFSSYLLSSHHSPSPHFRVLALRSETVRQELFGFLCTTFEASENYLT
Homology
[Close]
BLAST of CSPI03G36660 vs. ExPASy TrEMBL
Match: A0A0A0LGZ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G809970 PE=4 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 3.1e-53
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0 

Query: 26  FIRSQPIKQFCKKQKHFCSANPSFLSFFSSFSLFILLIPPSLPYLFGTSAFFFSSTGFLL 85
           FIRSQPIKQFCKKQKHFCSANPSFLSFFSSFSLFILLIPPSLPYLFGTSAFFFSSTGFLL
Sbjct: 17  FIRSQPIKQFCKKQKHFCSANPSFLSFFSSFSLFILLIPPSLPYLFGTSAFFFSSTGFLL 76

Query: 86  PIILFSSYLLSSHHSPSPHFRVLALRSETVRQELFGFLCTTFEASENYLT 136
           PIILFSSYLLSSHHSPSPHFRVLALRSETVRQELFGFLCTTFEASENYLT
Sbjct: 77  PIILFSSYLLSSHHSPSPHFRVLALRSETVRQELFGFLCTTFEASENYLT 126

[Close]
BLAST of CSPI03G36660 vs. NCBI nr
Match: KGN59321.1 (hypothetical protein Csa_001994 [Cucumis sativus])

HSP 1 Score: 217.6 bits (553), Expect = 6.5e-53
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0 

Query: 26  FIRSQPIKQFCKKQKHFCSANPSFLSFFSSFSLFILLIPPSLPYLFGTSAFFFSSTGFLL 85
           FIRSQPIKQFCKKQKHFCSANPSFLSFFSSFSLFILLIPPSLPYLFGTSAFFFSSTGFLL
Sbjct: 17  FIRSQPIKQFCKKQKHFCSANPSFLSFFSSFSLFILLIPPSLPYLFGTSAFFFSSTGFLL 76

Query: 86  PIILFSSYLLSSHHSPSPHFRVLALRSETVRQELFGFLCTTFEASENYLT 136
           PIILFSSYLLSSHHSPSPHFRVLALRSETVRQELFGFLCTTFEASENYLT
Sbjct: 77  PIILFSSYLLSSHHSPSPHFRVLALRSETVRQELFGFLCTTFEASENYLT 126

[Close]
BLAST of CSPI03G36660 vs. NCBI nr
Match: XP_038903928.1 (FT-interacting protein 3 isoform X1 [Benincasa hispida])

HSP 1 Score: 101.3 bits (251), Expect = 6.8e-18
Identity = 61/87 (70.11%), Postives = 62/87 (71.26%), Query Frame = 0 

Query: 49  FLSFFSSFSLFILLIPP-------SLPYLFGTSAFFFSSTGFLLPIILFSSYLLSSHHSP 108
           F  F S    F L+ PP       SLPYLF TS FFFSSTGFLLPIILF S    SH SP
Sbjct: 66  FPCFPSPLVPFFLVFPPYPHPPYHSLPYLFATSPFFFSSTGFLLPIILFPS-CNRSHQSP 125

Query: 109 SPHFRVLALRSETVRQELFGFLCTTFE 129
           SPHFRVLA RSETVRQELFGFLCTTFE
Sbjct: 126 SPHFRVLAFRSETVRQELFGFLCTTFE 151

The following BLAST results are available for this feature:
BLAST of CSPI03G36660 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI03G36660 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LGZ73.1e-53100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G809970 PE=4 SV=1[more]
BLAST of CSPI03G36660 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN59321.16.5e-53100.00hypothetical protein Csa_001994 [Cucumis sativus][more]
XP_038903928.16.8e-1870.11FT-interacting protein 3 isoform X1 [Benincasa hispida][more]
BLAST of CSPI03G36660 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G36660.1CSPI03G36660.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane