CSPI03G35980 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G35980
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	F-box protein
Location	Chr3: 31335627 .. 31336835 (-)
RNA-Seq Expression	CSPI03G35980
Synteny	CSPI03G35980

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTTTCCTGAAGACGTTGTATTGGAGATTTTGAGTCGTTTCTATTTGAATCAAGCAGGTAAAATTCAAGGCCTTTCAAAATTCTATAACAACTCTAGCTACAATTCCTACTACAAAACATTAATAGCCAAAAACCAACCTGGAATCGCTGATGGCTTCCTCCTCCAATCTCCCGTACCCAAATCCAATGACTACATTGTGTCCTTTGTTTCTCCACACAACGATTCTCCTGTAGTACCCTTGAATTTATCCTTGAGTTTCCTCCCAGGTCTCAATCCTAAAATTCGAGCTGTTGCTCCGAATGGTCTTCTCTTGTGCGAATCCCAACATTCAATTCGGCACAATAAACGGTCAATATACACAATTACTAAACTTTGCACGCAGCAATGGAAAGGACTTCCTATTCCTAAAACTAGATATTTTACCAAGAATATTGCCATGCATGTTCTTCGGTCAAATCCTCTCCACTTCAAAATTTTACGTTTATCTAGTGATAAAATTCCTTCTAAACGCCCTTTGCCATTTTCCTACACCATAATCGAGGTTTTTGATTCGAAATCTTGGAGGTGGAAGCTGTTGGATGATATTGTACACGATTATTATGGGAATTTCGAATTTGTTGACTCTAATCGTGCTCCTGTGTTTGCTAACGGATTAGCTCATTGGAAATTCACGGGTAACACTACCATCTTTGCTTTTGATTTCTACTCTGATACTTGGTCTAAAATTGCAATGCCAGAGACTATAGTTAATGACGAAAACAATAGTCGTGTTAGTGCTATTAGTGTTAATAGTGTTCGGGAATGGCGTACAGAGCTTGTGGAGTATGAAGGAAAGTTGGGAGTTCTACGAGAGTTCCATCAACCTTTCGCCCCTACCGCCTTGACTGAGCTATGGGTGATGCATAAAAATTTTTGGATGAAGAAGTTGGAATTTTCAAGGTTAATGCCTACGACTCTTTACGGATCGGATATTTTGGTGACATGGTTATCTGATTATCCTTCGAAAGTGAAGTTTTCTAATGAAGTGACGGGAGATTGCAATTACAAGACGTTGGAACAATGGCATAATATTGCACCGACAGTGTTTCCATTTTTGTCAGATTTTAAGAGCTGGAATTTTAACCCTCCACAGCGTTCAATTCAGCCTAAGTCTCTTGCTAAGATCCTTCGAAGAACTTATGAGCGTCAAGCTAGAGGAGTTTGA

mRNA sequence

ATGGATTTTCCTGAAGACGTTGTATTGGAGATTTTGAGTCGTTTCTATTTGAATCAAGCAGGTAAAATTCAAGGCCTTTCAAAATTCTATAACAACTCTAGCTACAATTCCTACTACAAAACATTAATAGCCAAAAACCAACCTGGAATCGCTGATGGCTTCCTCCTCCAATCTCCCGTACCCAAATCCAATGACTACATTGTGTCCTTTGTTTCTCCACACAACGATTCTCCTGTAGTACCCTTGAATTTATCCTTGAGTTTCCTCCCAGGTCTCAATCCTAAAATTCGAGCTGTTGCTCCGAATGGTCTTCTCTTGTGCGAATCCCAACATTCAATTCGGCACAATAAACGGTCAATATACACAATTACTAAACTTTGCACGCAGCAATGGAAAGGACTTCCTATTCCTAAAACTAGATATTTTACCAAGAATATTGCCATGCATGTTCTTCGGTCAAATCCTCTCCACTTCAAAATTTTACGTTTATCTAGTGATAAAATTCCTTCTAAACGCCCTTTGCCATTTTCCTACACCATAATCGAGGTTTTTGATTCGAAATCTTGGAGGTGGAAGCTGTTGGATGATATTGTACACGATTATTATGGGAATTTCGAATTTGTTGACTCTAATCGTGCTCCTGTGTTTGCTAACGGATTAGCTCATTGGAAATTCACGGGTAACACTACCATCTTTGCTTTTGATTTCTACTCTGATACTTGGTCTAAAATTGCAATGCCAGAGACTATAGTTAATGACGAAAACAATAGTCGTGTTAGTGCTATTAGTGTTAATAGTGTTCGGGAATGGCGTACAGAGCTTGTGGAGTATGAAGGAAAGTTGGGAGTTCTACGAGAGTTCCATCAACCTTTCGCCCCTACCGCCTTGACTGAGCTATGGGTGATGCATAAAAATTTTTGGATGAAGAAGTTGGAATTTTCAAGGTTAATGCCTACGACTCTTTACGGATCGGATATTTTGGTGACATGGTTATCTGATTATCCTTCGAAAGTGAAGTTTTCTAATGAAGTGACGGGAGATTGCAATTACAAGACGTTGGAACAATGGCATAATATTGCACCGACAGTGTTTCCATTTTTGTCAGATTTTAAGAGCTGGAATTTTAACCCTCCACAGCGTTCAATTCAGCCTAAGTCTCTTGCTAAGATCCTTCGAAGAACTTATGAGCGTCAAGCTAGAGGAGTTTGA

Coding sequence (CDS)

ATGGATTTTCCTGAAGACGTTGTATTGGAGATTTTGAGTCGTTTCTATTTGAATCAAGCAGGTAAAATTCAAGGCCTTTCAAAATTCTATAACAACTCTAGCTACAATTCCTACTACAAAACATTAATAGCCAAAAACCAACCTGGAATCGCTGATGGCTTCCTCCTCCAATCTCCCGTACCCAAATCCAATGACTACATTGTGTCCTTTGTTTCTCCACACAACGATTCTCCTGTAGTACCCTTGAATTTATCCTTGAGTTTCCTCCCAGGTCTCAATCCTAAAATTCGAGCTGTTGCTCCGAATGGTCTTCTCTTGTGCGAATCCCAACATTCAATTCGGCACAATAAACGGTCAATATACACAATTACTAAACTTTGCACGCAGCAATGGAAAGGACTTCCTATTCCTAAAACTAGATATTTTACCAAGAATATTGCCATGCATGTTCTTCGGTCAAATCCTCTCCACTTCAAAATTTTACGTTTATCTAGTGATAAAATTCCTTCTAAACGCCCTTTGCCATTTTCCTACACCATAATCGAGGTTTTTGATTCGAAATCTTGGAGGTGGAAGCTGTTGGATGATATTGTACACGATTATTATGGGAATTTCGAATTTGTTGACTCTAATCGTGCTCCTGTGTTTGCTAACGGATTAGCTCATTGGAAATTCACGGGTAACACTACCATCTTTGCTTTTGATTTCTACTCTGATACTTGGTCTAAAATTGCAATGCCAGAGACTATAGTTAATGACGAAAACAATAGTCGTGTTAGTGCTATTAGTGTTAATAGTGTTCGGGAATGGCGTACAGAGCTTGTGGAGTATGAAGGAAAGTTGGGAGTTCTACGAGAGTTCCATCAACCTTTCGCCCCTACCGCCTTGACTGAGCTATGGGTGATGCATAAAAATTTTTGGATGAAGAAGTTGGAATTTTCAAGGTTAATGCCTACGACTCTTTACGGATCGGATATTTTGGTGACATGGTTATCTGATTATCCTTCGAAAGTGAAGTTTTCTAATGAAGTGACGGGAGATTGCAATTACAAGACGTTGGAACAATGGCATAATATTGCACCGACAGTGTTTCCATTTTTGTCAGATTTTAAGAGCTGGAATTTTAACCCTCCACAGCGTTCAATTCAGCCTAAGTCTCTTGCTAAGATCCTTCGAAGAACTTATGAGCGTCAAGCTAGAGGAGTTTGA

Protein sequence

MDFPEDVVLEILSRFYLNQAGKIQGLSKFYNNSSYNSYYKTLIAKNQPGIADGFLLQSPVPKSNDYIVSFVSPHNDSPVVPLNLSLSFLPGLNPKIRAVAPNGLLLCESQHSIRHNKRSIYTITKLCTQQWKGLPIPKTRYFTKNIAMHVLRSNPLHFKILRLSSDKIPSKRPLPFSYTIIEVFDSKSWRWKLLDDIVHDYYGNFEFVDSNRAPVFANGLAHWKFTGNTTIFAFDFYSDTWSKIAMPETIVNDENNSRVSAISVNSVREWRTELVEYEGKLGVLREFHQPFAPTALTELWVMHKNFWMKKLEFSRLMPTTLYGSDILVTWLSDYPSKVKFSNEVTGDCNYKTLEQWHNIAPTVFPFLSDFKSWNFNPPQRSIQPKSLAKILRRTYERQARGV*

Homology

[Close]

BLAST of CSPI03G35980 vs. ExPASy Swiss-Prot
Match: Q6NLE0 (F-box protein At5g41720 OS=Arabidopsis thaliana OX=3702 GN=At5g41720 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 4.8e-06
Identity = 51/162 (31.48%), Postives = 78/162 (48.15%), Query Frame = 0


Query: 6   DVVLEILSRFYLNQAGKIQGLSKFYNNSSYN-SYYKTLIAKNQPGIADGFLLQSPVPKSN 65
           DV+LEI+S     +  K + LSK  N  SY  S+    + +    +  G++      K  
Sbjct: 10  DVLLEIMSYCPATEMAKFRLLSKECNKRSYEMSFINRHLHRTNSFL--GYIFYYKDNKWF 69

Query: 66  DYIVSFVSPHNDSPVVPLNLSLSFLPGL-NPKIRAV-APNGLLLCESQHSIRHNKRSIYT 125
                FVS  ++     +N  L+FLP L N  I A    +G+LLC         K   Y 
Sbjct: 70  RNHSCFVSGVDEKDKNRIN--LAFLPPLCNVSIEACDTHHGILLCVDVVFKGRQKIPDYI 129

Query: 126 ITKLCTQQWKGLPIPKTRYFTKNIAMHVLRSNPLHFKILRLS 165
           + K  T+Q++ +P PKTR+ T    + V+ SNP  +KI+R+S
Sbjct: 130 VCKPATKQYRIIPNPKTRFGTVATGLMVISSNPFRYKIIRVS 167

[Close]

BLAST of CSPI03G35980 vs. ExPASy TrEMBL
Match: A0A0A0LBP1 (FBA_3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G785420 PE=4 SV=1)

HSP 1 Score: 829.3 bits (2141), Expect = 6.8e-237
Identity = 399/402 (99.25%), Postives = 400/402 (99.50%), Query Frame = 0


Query: 1   MDFPEDVVLEILSRFYLNQAGKIQGLSKFYNNSSYNSYYKTLIAKNQPGIADGFLLQSPV 60
           MDFPEDVVLEILSRFYLNQAGKIQGLSKFYNNSSYNSYYKTLIAKNQPGIADGFLLQSPV
Sbjct: 1   MDFPEDVVLEILSRFYLNQAGKIQGLSKFYNNSSYNSYYKTLIAKNQPGIADGFLLQSPV 60

Query: 61  PKSNDYIVSFVSPHNDSPVVPLNLSLSFLPGLNPKIRAVAPNGLLLCESQHSIRHNKRSI 120
           PKSNDYIVSFVSPH DSPVVPLNLSLSFLPGLNPKIRAVAPNGLLLCESQHSIRHNKRSI
Sbjct: 61  PKSNDYIVSFVSPHKDSPVVPLNLSLSFLPGLNPKIRAVAPNGLLLCESQHSIRHNKRSI 120

Query: 121 YTITKLCTQQWKGLPIPKTRYFTKNIAMHVLRSNPLHFKILRLSSDKIPSKRPLPFSYTI 180
           YTITKLCTQQWKGLPIPKTRYFTKNIAMHVLRSNPLHFKILRLSSDKIPSKRPLPFSYTI
Sbjct: 121 YTITKLCTQQWKGLPIPKTRYFTKNIAMHVLRSNPLHFKILRLSSDKIPSKRPLPFSYTI 180

Query: 181 IEVFDSKSWRWKLLDDIVHDYYGNFEFVDSNRAPVFANGLAHWKFTGNTTIFAFDFYSDT 240
           IEVFDSKSWRWKLLDDIVHDYYGNFEFVDSNRAPVFANGLAHWKFTGNTTIFAFDFYSDT
Sbjct: 181 IEVFDSKSWRWKLLDDIVHDYYGNFEFVDSNRAPVFANGLAHWKFTGNTTIFAFDFYSDT 240

Query: 241 WSKIAMPETIVNDENNSRVSAISVNSVREWRTELVEYEGKLGVLREFHQPFAPTALTELW 300
           WSKIAMPETIVNDENNSRV+AISVNSVREWRTELVEYEGKLGVLREFHQPFAPTALTELW
Sbjct: 241 WSKIAMPETIVNDENNSRVNAISVNSVREWRTELVEYEGKLGVLREFHQPFAPTALTELW 300

Query: 301 VMHKNFWMKKLEFSRLMPTTLYGSDILVTWLSDYPSKVKFSNEVTGDCNYKTLEQWHNIA 360
           VMHK FWMKKLEFSRLMPTTLYGSDILVTWLSDYPSKVKFSNEVTGDCNYKTLEQWHNIA
Sbjct: 301 VMHKKFWMKKLEFSRLMPTTLYGSDILVTWLSDYPSKVKFSNEVTGDCNYKTLEQWHNIA 360

Query: 361 PTVFPFLSDFKSWNFNPPQRSIQPKSLAKILRRTYERQARGV 403
           PTVFPFLSDFKSWNFNPPQRSIQPKSLAKILRRTYERQARGV
Sbjct: 361 PTVFPFLSDFKSWNFNPPQRSIQPKSLAKILRRTYERQARGV 402

[Close]

BLAST of CSPI03G35980 vs. ExPASy TrEMBL
Match: A0A1S3B7Y4 (F-box protein At5g49610-like OS=Cucumis melo OX=3656 GN=LOC103487156 PE=4 SV=1)

HSP 1 Score: 565.8 bits (1457), Expect = 1.4e-157
Identity = 288/399 (72.18%), Postives = 322/399 (80.70%), Query Frame = 0


Query: 1   MDFPEDVVLEILSRFYLNQAGKIQGLSKFYNNSSYNSYYKTLIAKN--QPGIADGFLLQS 60
           MD P+DV+LEIL RF LNQAGKIQ LSKFYN +SY+  YKTLI++N  QP I DGFLLQS
Sbjct: 1   MDLPDDVILEILIRFSLNQAGKIQTLSKFYNKTSYSFCYKTLISENHSQP-ILDGFLLQS 60

Query: 61  PVPKSNDYIVSFVSPHNDSPVVPLNLSLSFLPGLNPKIRAVAPNGLLLCESQHSIRHNKR 120
           P  KSN +++SFVSPH ++   PLNLSL+FLPGLNP+IRAVAPNGLLLCE+QHSIRHNKR
Sbjct: 61  PKSKSNAHLLSFVSPHPNNNSPPLNLSLNFLPGLNPQIRAVAPNGLLLCETQHSIRHNKR 120

Query: 121 SIYTITKLCTQQWKGLPIPKTRYFTKNIAMHVLRSNPLHFKILRLSSDKIPSKRPLPFSY 180
            IYTITKL TQQWKGLPIPKTRYFT NIAM+VLRSNPLHFKILRLSSDKIPSKRPLPF Y
Sbjct: 121 LIYTITKLSTQQWKGLPIPKTRYFTSNIAMYVLRSNPLHFKILRLSSDKIPSKRPLPFCY 180

Query: 181 TIIEVFDSKSWRWKLLDDIVHDYYGNFEFVDSNRAPVFANGLAHWKFTGNTTIFAFDFYS 240
           TI EVFDS+SWRWK LDDIVH Y G  E+VDS RAPVFA GLAHWKF  +T+IFAFDFYS
Sbjct: 181 TICEVFDSESWRWKQLDDIVHYYCGKTEYVDSQRAPVFAYGLAHWKFRDDTSIFAFDFYS 240

Query: 241 DTWSKIAMPETIVNDENNSRVSAISVNSVREWRTELVEYEGKLGVLREFHQPFAPTALTE 300
           +TWSKIAMPETIVND+NNS     S +  + W  ELVEYEGKLGV+REFH+   PT  TE
Sbjct: 241 ETWSKIAMPETIVNDKNNS-----SSSHFQRWHIELVEYEGKLGVVREFHK---PTVFTE 300

Query: 301 LWVMH----KNFWMKKLEFSRLMPTTLYGSDILVTWLSDYPSKVKFSNEVTGDCNYKTLE 360
           LWVM     K  WMKKL+ S  MPTT YGSDI + WL D  S V FSN  TG+ NYK  E
Sbjct: 301 LWVMENYGKKKMWMKKLDSSGSMPTTFYGSDIQMMWLHDDSSNVMFSNIETGERNYKKSE 360

Query: 361 QWHNIAPTVFPFLSDFKSWNFNPPQRSIQPKSLAKILRR 394
           Q H   P VFPFLSDF++WNFNPP RSI+PK+++KILRR
Sbjct: 361 QSHRHLPMVFPFLSDFETWNFNPPPRSIKPKAVSKILRR 390

[Close]

BLAST of CSPI03G35980 vs. ExPASy TrEMBL
Match: A0A5D3DNY0 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004950 PE=4 SV=1)

HSP 1 Score: 518.5 bits (1334), Expect = 2.6e-143
Identity = 267/397 (67.25%), Postives = 297/397 (74.81%), Query Frame = 0


Query: 1   MDFPEDVVLEILSRFYLNQAGKIQGLSKFYNNSSYNSYYKTLIAKNQPGIADGFLLQSPV 60
           MD P+DV+LEIL RF LNQ                               ADGFLLQSP 
Sbjct: 1   MDLPDDVILEILIRFSLNQ-------------------------------ADGFLLQSPK 60

Query: 61  PKSNDYIVSFVSPHNDSPVVPLNLSLSFLPGLNPKIRAVAPNGLLLCESQHSIRHNKRSI 120
            KSN +++SFVSPH ++   PLNLSL+FLPGLNP+IRAVAPNGLLLCE+QHSIRHNKR I
Sbjct: 61  SKSNAHLLSFVSPHPNNNSPPLNLSLNFLPGLNPQIRAVAPNGLLLCETQHSIRHNKRLI 120

Query: 121 YTITKLCTQQWKGLPIPKTRYFTKNIAMHVLRSNPLHFKILRLSSDKIPSKRPLPFSYTI 180
           YTITKL TQQWKGLPIPKTRYFT NIAM+VLRSNPLHFKILRLSSDKIPSKRPLPF YTI
Sbjct: 121 YTITKLSTQQWKGLPIPKTRYFTSNIAMYVLRSNPLHFKILRLSSDKIPSKRPLPFCYTI 180

Query: 181 IEVFDSKSWRWKLLDDIVHDYYGNFEFVDSNRAPVFANGLAHWKFTGNTTIFAFDFYSDT 240
            EVFDS+SWRWK LDDIVH Y G  E+VDS RAPVFA GLAHWKF  +T+IFAFDFYS+T
Sbjct: 181 CEVFDSESWRWKQLDDIVHYYCGKTEYVDSQRAPVFAYGLAHWKFRDDTSIFAFDFYSET 240

Query: 241 WSKIAMPETIVNDENNSRVSAISVNSVREWRTELVEYEGKLGVLREFHQPFAPTALTELW 300
           WSKIAMPETIVND+NNS     S +  + W  ELVEYEGKLGV+REFH+   PT  TELW
Sbjct: 241 WSKIAMPETIVNDKNNS-----SSSHFQRWHIELVEYEGKLGVVREFHK---PTVFTELW 300

Query: 301 VMH----KNFWMKKLEFSRLMPTTLYGSDILVTWLSDYPSKVKFSNEVTGDCNYKTLEQW 360
           VM     K  WMKKL+ S  MPTT YGSDI + WL D  S V FSN   G+ NYK LEQ 
Sbjct: 301 VMENYGKKKMWMKKLDSSGSMPTTFYGSDIQMMWLHDDSSNVMFSNIEMGERNYKKLEQS 358

Query: 361 HNIAPTVFPFLSDFKSWNFNPPQRSIQPKSLAKILRR 394
           H   P VFPFLSDF++WNFNPP RSI+PK+++KILRR
Sbjct: 361 HRHLPMVFPFLSDFETWNFNPPPRSIKPKAVSKILRR 358

[Close]

BLAST of CSPI03G35980 vs. ExPASy TrEMBL
Match: A0A5A7TPP2 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G001090 PE=4 SV=1)

HSP 1 Score: 518.5 bits (1334), Expect = 2.6e-143
Identity = 267/397 (67.25%), Postives = 297/397 (74.81%), Query Frame = 0


Query: 1   MDFPEDVVLEILSRFYLNQAGKIQGLSKFYNNSSYNSYYKTLIAKNQPGIADGFLLQSPV 60
           MD P+DV+LEIL RF LNQ                               ADGFLLQSP 
Sbjct: 1   MDLPDDVILEILIRFSLNQ-------------------------------ADGFLLQSPK 60

Query: 61  PKSNDYIVSFVSPHNDSPVVPLNLSLSFLPGLNPKIRAVAPNGLLLCESQHSIRHNKRSI 120
            KSN +++SFVSPH ++   PLNLSL+FLPGLNP+IRAVAPNGLLLCE+QHSIRHNKR I
Sbjct: 61  SKSNAHLLSFVSPHPNNNSPPLNLSLNFLPGLNPQIRAVAPNGLLLCETQHSIRHNKRLI 120

Query: 121 YTITKLCTQQWKGLPIPKTRYFTKNIAMHVLRSNPLHFKILRLSSDKIPSKRPLPFSYTI 180
           YTITKL TQQWKGLPIPKTRYFT NIAM+VLRSNPLHFKILRLSSDKIPSKRPLPF YTI
Sbjct: 121 YTITKLSTQQWKGLPIPKTRYFTSNIAMYVLRSNPLHFKILRLSSDKIPSKRPLPFCYTI 180

Query: 181 IEVFDSKSWRWKLLDDIVHDYYGNFEFVDSNRAPVFANGLAHWKFTGNTTIFAFDFYSDT 240
            EVFDS+SWRWK LDDIVH Y G  E+VDS RAPVFA GLAHWKF  +T+IFAFDFYS+T
Sbjct: 181 CEVFDSESWRWKQLDDIVHYYCGKTEYVDSQRAPVFAYGLAHWKFRDDTSIFAFDFYSET 240

Query: 241 WSKIAMPETIVNDENNSRVSAISVNSVREWRTELVEYEGKLGVLREFHQPFAPTALTELW 300
           WSKIAMPETIVND+NNS     S +  + W  ELVEYEGKLGV+REFH+   PT  TELW
Sbjct: 241 WSKIAMPETIVNDKNNS-----SSSHFQRWHIELVEYEGKLGVVREFHK---PTVFTELW 300

Query: 301 VMH----KNFWMKKLEFSRLMPTTLYGSDILVTWLSDYPSKVKFSNEVTGDCNYKTLEQW 360
           VM     K  WMKKL+ S  MPTT YGSDI + WL D  S V FSN  TG+ NYK  EQ 
Sbjct: 301 VMENYGKKKMWMKKLDSSGSMPTTFYGSDIQMMWLHDDSSNVMFSNIETGERNYKKSEQS 358

Query: 361 HNIAPTVFPFLSDFKSWNFNPPQRSIQPKSLAKILRR 394
           H   P VFPFLSDF++WNFNPP RSI+PK+++KILRR
Sbjct: 361 HRHLPMVFPFLSDFETWNFNPPPRSIKPKAVSKILRR 358

[Close]

BLAST of CSPI03G35980 vs. ExPASy TrEMBL
Match: A0A6J1F395 (F-box protein At5g49610-like OS=Cucurbita moschata OX=3662 GN=LOC111441737 PE=4 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 4.1e-93
Identity = 197/401 (49.13%), Postives = 258/401 (64.34%), Query Frame = 0


Query: 1   MDFPEDVVLEILSRFYLNQAGKIQGLSKFYNNSSYNSYYKTLIAKNQPGIADGFLLQS-- 60
           M+ P+DV+L+ILSR   +  GKI+ LSK +N ++Y SY+K L A +QP +  GFLLQS  
Sbjct: 1   MELPDDVILDILSRLPFDAVGKIRALSKSHNQATYTSYFKALAAGHQP-LLLGFLLQSLR 60

Query: 61  PVPKSNDYIVSFVSPHNDSPVVPLNLSLSFLPGLNPKIRAVAPNGLLLCESQHSIRHNKR 120
                  +++SF +P  +SP  PL LSLSFLPG  P++ AVAPNGL+L +S+H  RH +R
Sbjct: 61  TTATGRRHVLSFATPRPNSP--PLELSLSFLPGQTPQVLAVAPNGLVLFQSRHRTRH-QR 120

Query: 121 SIYTITKLCTQQWKGLPIPKTRYFTKNIAMHVLRSNPLHFKILRLSSDKIPSKRPLPFSY 180
            +YTI KL T+QW+ +PIPKTR+FT NIAM+V RSNPLHFKI+RL  D   SKR   F Y
Sbjct: 121 QLYTICKLPTKQWQRIPIPKTRFFTLNIAMYVTRSNPLHFKIIRLCRDTTFSKRRRSFCY 180

Query: 181 TIIEVFDSKSWRWKLLDDIVHDYYGNFEFVDSNRAPVFANGLAHWKFTGNTTIFAFDFYS 240
           T+ E+FDS+SWRWK L+D+VHD   +  FV+     V   GLAHW+F    +I AFDF S
Sbjct: 181 TVCELFDSESWRWKRLEDLVHD--NSLSFVEPFCVAVVVGGLAHWQFFDEKSILAFDFLS 240

Query: 241 DTWSKIAMPETI-VNDENNSRVSAISVNSVREWRTELVEYEGKLGVLREFHQPFAPTALT 300
           +TWS  A PE I V  E   R         + W T+LVEY+GKLG++REF +P A  A  
Sbjct: 241 ETWSSFAAPEAITVEQEARERTEPF-----KSWHTKLVEYKGKLGLIREFSEPAA--ARN 300

Query: 301 ELWVMH---KNFWMKKLEFSRLMPTTLYGSDILVTWLSDYPSKVKFSNEVTGDCNYKTLE 360
           ELWVM    +  W KK EF    PT +YGSD L+   ++   KVKF N  TG+ +Y+ LE
Sbjct: 301 ELWVMEDYKERVWTKKWEFLVSNPTAVYGSDTLMAMENN--EKVKFCNVETGNYSYRQLE 360

Query: 361 QWHNIAPT--VFPFLSDFKSWN-FNPPQRSIQPKSLAKILR 393
             H       VFPF SDF+ W+ + PP RS  P ++A++LR
Sbjct: 361 PTHYYGSVLKVFPFSSDFEPWDYYPPPPRSPNPPTVAELLR 386

[Close]

BLAST of CSPI03G35980 vs. NCBI nr
Match: XP_004136723.1 (F-box protein At5g49610 [Cucumis sativus] >KGN59248.1 hypothetical protein Csa_000833 [Cucumis sativus])

HSP 1 Score: 829.3 bits (2141), Expect = 1.4e-236
Identity = 399/402 (99.25%), Postives = 400/402 (99.50%), Query Frame = 0


Query: 1   MDFPEDVVLEILSRFYLNQAGKIQGLSKFYNNSSYNSYYKTLIAKNQPGIADGFLLQSPV 60
           MDFPEDVVLEILSRFYLNQAGKIQGLSKFYNNSSYNSYYKTLIAKNQPGIADGFLLQSPV
Sbjct: 1   MDFPEDVVLEILSRFYLNQAGKIQGLSKFYNNSSYNSYYKTLIAKNQPGIADGFLLQSPV 60

Query: 61  PKSNDYIVSFVSPHNDSPVVPLNLSLSFLPGLNPKIRAVAPNGLLLCESQHSIRHNKRSI 120
           PKSNDYIVSFVSPH DSPVVPLNLSLSFLPGLNPKIRAVAPNGLLLCESQHSIRHNKRSI
Sbjct: 61  PKSNDYIVSFVSPHKDSPVVPLNLSLSFLPGLNPKIRAVAPNGLLLCESQHSIRHNKRSI 120

Query: 121 YTITKLCTQQWKGLPIPKTRYFTKNIAMHVLRSNPLHFKILRLSSDKIPSKRPLPFSYTI 180
           YTITKLCTQQWKGLPIPKTRYFTKNIAMHVLRSNPLHFKILRLSSDKIPSKRPLPFSYTI
Sbjct: 121 YTITKLCTQQWKGLPIPKTRYFTKNIAMHVLRSNPLHFKILRLSSDKIPSKRPLPFSYTI 180

Query: 181 IEVFDSKSWRWKLLDDIVHDYYGNFEFVDSNRAPVFANGLAHWKFTGNTTIFAFDFYSDT 240
           IEVFDSKSWRWKLLDDIVHDYYGNFEFVDSNRAPVFANGLAHWKFTGNTTIFAFDFYSDT
Sbjct: 181 IEVFDSKSWRWKLLDDIVHDYYGNFEFVDSNRAPVFANGLAHWKFTGNTTIFAFDFYSDT 240

Query: 241 WSKIAMPETIVNDENNSRVSAISVNSVREWRTELVEYEGKLGVLREFHQPFAPTALTELW 300
           WSKIAMPETIVNDENNSRV+AISVNSVREWRTELVEYEGKLGVLREFHQPFAPTALTELW
Sbjct: 241 WSKIAMPETIVNDENNSRVNAISVNSVREWRTELVEYEGKLGVLREFHQPFAPTALTELW 300

Query: 301 VMHKNFWMKKLEFSRLMPTTLYGSDILVTWLSDYPSKVKFSNEVTGDCNYKTLEQWHNIA 360
           VMHK FWMKKLEFSRLMPTTLYGSDILVTWLSDYPSKVKFSNEVTGDCNYKTLEQWHNIA
Sbjct: 301 VMHKKFWMKKLEFSRLMPTTLYGSDILVTWLSDYPSKVKFSNEVTGDCNYKTLEQWHNIA 360

Query: 361 PTVFPFLSDFKSWNFNPPQRSIQPKSLAKILRRTYERQARGV 403
           PTVFPFLSDFKSWNFNPPQRSIQPKSLAKILRRTYERQARGV
Sbjct: 361 PTVFPFLSDFKSWNFNPPQRSIQPKSLAKILRRTYERQARGV 402

[Close]

BLAST of CSPI03G35980 vs. NCBI nr
Match: XP_008443600.1 (PREDICTED: F-box protein At5g49610-like [Cucumis melo])

HSP 1 Score: 565.8 bits (1457), Expect = 2.9e-157
Identity = 288/399 (72.18%), Postives = 322/399 (80.70%), Query Frame = 0


Query: 1   MDFPEDVVLEILSRFYLNQAGKIQGLSKFYNNSSYNSYYKTLIAKN--QPGIADGFLLQS 60
           MD P+DV+LEIL RF LNQAGKIQ LSKFYN +SY+  YKTLI++N  QP I DGFLLQS
Sbjct: 1   MDLPDDVILEILIRFSLNQAGKIQTLSKFYNKTSYSFCYKTLISENHSQP-ILDGFLLQS 60

Query: 61  PVPKSNDYIVSFVSPHNDSPVVPLNLSLSFLPGLNPKIRAVAPNGLLLCESQHSIRHNKR 120
           P  KSN +++SFVSPH ++   PLNLSL+FLPGLNP+IRAVAPNGLLLCE+QHSIRHNKR
Sbjct: 61  PKSKSNAHLLSFVSPHPNNNSPPLNLSLNFLPGLNPQIRAVAPNGLLLCETQHSIRHNKR 120

Query: 121 SIYTITKLCTQQWKGLPIPKTRYFTKNIAMHVLRSNPLHFKILRLSSDKIPSKRPLPFSY 180
            IYTITKL TQQWKGLPIPKTRYFT NIAM+VLRSNPLHFKILRLSSDKIPSKRPLPF Y
Sbjct: 121 LIYTITKLSTQQWKGLPIPKTRYFTSNIAMYVLRSNPLHFKILRLSSDKIPSKRPLPFCY 180

Query: 181 TIIEVFDSKSWRWKLLDDIVHDYYGNFEFVDSNRAPVFANGLAHWKFTGNTTIFAFDFYS 240
           TI EVFDS+SWRWK LDDIVH Y G  E+VDS RAPVFA GLAHWKF  +T+IFAFDFYS
Sbjct: 181 TICEVFDSESWRWKQLDDIVHYYCGKTEYVDSQRAPVFAYGLAHWKFRDDTSIFAFDFYS 240

Query: 241 DTWSKIAMPETIVNDENNSRVSAISVNSVREWRTELVEYEGKLGVLREFHQPFAPTALTE 300
           +TWSKIAMPETIVND+NNS     S +  + W  ELVEYEGKLGV+REFH+   PT  TE
Sbjct: 241 ETWSKIAMPETIVNDKNNS-----SSSHFQRWHIELVEYEGKLGVVREFHK---PTVFTE 300

Query: 301 LWVMH----KNFWMKKLEFSRLMPTTLYGSDILVTWLSDYPSKVKFSNEVTGDCNYKTLE 360
           LWVM     K  WMKKL+ S  MPTT YGSDI + WL D  S V FSN  TG+ NYK  E
Sbjct: 301 LWVMENYGKKKMWMKKLDSSGSMPTTFYGSDIQMMWLHDDSSNVMFSNIETGERNYKKSE 360

Query: 361 QWHNIAPTVFPFLSDFKSWNFNPPQRSIQPKSLAKILRR 394
           Q H   P VFPFLSDF++WNFNPP RSI+PK+++KILRR
Sbjct: 361 QSHRHLPMVFPFLSDFETWNFNPPPRSIKPKAVSKILRR 390

[Close]

BLAST of CSPI03G35980 vs. NCBI nr
Match: KAA0043777.1 (F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 518.5 bits (1334), Expect = 5.3e-143
Identity = 267/397 (67.25%), Postives = 297/397 (74.81%), Query Frame = 0


Query: 1   MDFPEDVVLEILSRFYLNQAGKIQGLSKFYNNSSYNSYYKTLIAKNQPGIADGFLLQSPV 60
           MD P+DV+LEIL RF LNQ                               ADGFLLQSP 
Sbjct: 1   MDLPDDVILEILIRFSLNQ-------------------------------ADGFLLQSPK 60

Query: 61  PKSNDYIVSFVSPHNDSPVVPLNLSLSFLPGLNPKIRAVAPNGLLLCESQHSIRHNKRSI 120
            KSN +++SFVSPH ++   PLNLSL+FLPGLNP+IRAVAPNGLLLCE+QHSIRHNKR I
Sbjct: 61  SKSNAHLLSFVSPHPNNNSPPLNLSLNFLPGLNPQIRAVAPNGLLLCETQHSIRHNKRLI 120

Query: 121 YTITKLCTQQWKGLPIPKTRYFTKNIAMHVLRSNPLHFKILRLSSDKIPSKRPLPFSYTI 180
           YTITKL TQQWKGLPIPKTRYFT NIAM+VLRSNPLHFKILRLSSDKIPSKRPLPF YTI
Sbjct: 121 YTITKLSTQQWKGLPIPKTRYFTSNIAMYVLRSNPLHFKILRLSSDKIPSKRPLPFCYTI 180

Query: 181 IEVFDSKSWRWKLLDDIVHDYYGNFEFVDSNRAPVFANGLAHWKFTGNTTIFAFDFYSDT 240
            EVFDS+SWRWK LDDIVH Y G  E+VDS RAPVFA GLAHWKF  +T+IFAFDFYS+T
Sbjct: 181 CEVFDSESWRWKQLDDIVHYYCGKTEYVDSQRAPVFAYGLAHWKFRDDTSIFAFDFYSET 240

Query: 241 WSKIAMPETIVNDENNSRVSAISVNSVREWRTELVEYEGKLGVLREFHQPFAPTALTELW 300
           WSKIAMPETIVND+NNS     S +  + W  ELVEYEGKLGV+REFH+   PT  TELW
Sbjct: 241 WSKIAMPETIVNDKNNS-----SSSHFQRWHIELVEYEGKLGVVREFHK---PTVFTELW 300

Query: 301 VMH----KNFWMKKLEFSRLMPTTLYGSDILVTWLSDYPSKVKFSNEVTGDCNYKTLEQW 360
           VM     K  WMKKL+ S  MPTT YGSDI + WL D  S V FSN  TG+ NYK  EQ 
Sbjct: 301 VMENYGKKKMWMKKLDSSGSMPTTFYGSDIQMMWLHDDSSNVMFSNIETGERNYKKSEQS 358

Query: 361 HNIAPTVFPFLSDFKSWNFNPPQRSIQPKSLAKILRR 394
           H   P VFPFLSDF++WNFNPP RSI+PK+++KILRR
Sbjct: 361 HRHLPMVFPFLSDFETWNFNPPPRSIKPKAVSKILRR 358

[Close]

BLAST of CSPI03G35980 vs. NCBI nr
Match: TYK25356.1 (F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 518.5 bits (1334), Expect = 5.3e-143
Identity = 267/397 (67.25%), Postives = 297/397 (74.81%), Query Frame = 0


Query: 1   MDFPEDVVLEILSRFYLNQAGKIQGLSKFYNNSSYNSYYKTLIAKNQPGIADGFLLQSPV 60
           MD P+DV+LEIL RF LNQ                               ADGFLLQSP 
Sbjct: 1   MDLPDDVILEILIRFSLNQ-------------------------------ADGFLLQSPK 60

Query: 61  PKSNDYIVSFVSPHNDSPVVPLNLSLSFLPGLNPKIRAVAPNGLLLCESQHSIRHNKRSI 120
            KSN +++SFVSPH ++   PLNLSL+FLPGLNP+IRAVAPNGLLLCE+QHSIRHNKR I
Sbjct: 61  SKSNAHLLSFVSPHPNNNSPPLNLSLNFLPGLNPQIRAVAPNGLLLCETQHSIRHNKRLI 120

Query: 121 YTITKLCTQQWKGLPIPKTRYFTKNIAMHVLRSNPLHFKILRLSSDKIPSKRPLPFSYTI 180
           YTITKL TQQWKGLPIPKTRYFT NIAM+VLRSNPLHFKILRLSSDKIPSKRPLPF YTI
Sbjct: 121 YTITKLSTQQWKGLPIPKTRYFTSNIAMYVLRSNPLHFKILRLSSDKIPSKRPLPFCYTI 180

Query: 181 IEVFDSKSWRWKLLDDIVHDYYGNFEFVDSNRAPVFANGLAHWKFTGNTTIFAFDFYSDT 240
            EVFDS+SWRWK LDDIVH Y G  E+VDS RAPVFA GLAHWKF  +T+IFAFDFYS+T
Sbjct: 181 CEVFDSESWRWKQLDDIVHYYCGKTEYVDSQRAPVFAYGLAHWKFRDDTSIFAFDFYSET 240

Query: 241 WSKIAMPETIVNDENNSRVSAISVNSVREWRTELVEYEGKLGVLREFHQPFAPTALTELW 300
           WSKIAMPETIVND+NNS     S +  + W  ELVEYEGKLGV+REFH+   PT  TELW
Sbjct: 241 WSKIAMPETIVNDKNNS-----SSSHFQRWHIELVEYEGKLGVVREFHK---PTVFTELW 300

Query: 301 VMH----KNFWMKKLEFSRLMPTTLYGSDILVTWLSDYPSKVKFSNEVTGDCNYKTLEQW 360
           VM     K  WMKKL+ S  MPTT YGSDI + WL D  S V FSN   G+ NYK LEQ 
Sbjct: 301 VMENYGKKKMWMKKLDSSGSMPTTFYGSDIQMMWLHDDSSNVMFSNIEMGERNYKKLEQS 358

Query: 361 HNIAPTVFPFLSDFKSWNFNPPQRSIQPKSLAKILRR 394
           H   P VFPFLSDF++WNFNPP RSI+PK+++KILRR
Sbjct: 361 HRHLPMVFPFLSDFETWNFNPPPRSIKPKAVSKILRR 358

[Close]

BLAST of CSPI03G35980 vs. NCBI nr
Match: XP_022934602.1 (F-box protein At5g49610-like [Cucurbita moschata])

HSP 1 Score: 351.7 bits (901), Expect = 8.6e-93
Identity = 197/401 (49.13%), Postives = 258/401 (64.34%), Query Frame = 0


Query: 1   MDFPEDVVLEILSRFYLNQAGKIQGLSKFYNNSSYNSYYKTLIAKNQPGIADGFLLQS-- 60
           M+ P+DV+L+ILSR   +  GKI+ LSK +N ++Y SY+K L A +QP +  GFLLQS  
Sbjct: 1   MELPDDVILDILSRLPFDAVGKIRALSKSHNQATYTSYFKALAAGHQP-LLLGFLLQSLR 60

Query: 61  PVPKSNDYIVSFVSPHNDSPVVPLNLSLSFLPGLNPKIRAVAPNGLLLCESQHSIRHNKR 120
                  +++SF +P  +SP  PL LSLSFLPG  P++ AVAPNGL+L +S+H  RH +R
Sbjct: 61  TTATGRRHVLSFATPRPNSP--PLELSLSFLPGQTPQVLAVAPNGLVLFQSRHRTRH-QR 120

Query: 121 SIYTITKLCTQQWKGLPIPKTRYFTKNIAMHVLRSNPLHFKILRLSSDKIPSKRPLPFSY 180
            +YTI KL T+QW+ +PIPKTR+FT NIAM+V RSNPLHFKI+RL  D   SKR   F Y
Sbjct: 121 QLYTICKLPTKQWQRIPIPKTRFFTLNIAMYVTRSNPLHFKIIRLCRDTTFSKRRRSFCY 180

Query: 181 TIIEVFDSKSWRWKLLDDIVHDYYGNFEFVDSNRAPVFANGLAHWKFTGNTTIFAFDFYS 240
           T+ E+FDS+SWRWK L+D+VHD   +  FV+     V   GLAHW+F    +I AFDF S
Sbjct: 181 TVCELFDSESWRWKRLEDLVHD--NSLSFVEPFCVAVVVGGLAHWQFFDEKSILAFDFLS 240

Query: 241 DTWSKIAMPETI-VNDENNSRVSAISVNSVREWRTELVEYEGKLGVLREFHQPFAPTALT 300
           +TWS  A PE I V  E   R         + W T+LVEY+GKLG++REF +P A  A  
Sbjct: 241 ETWSSFAAPEAITVEQEARERTEPF-----KSWHTKLVEYKGKLGLIREFSEPAA--ARN 300

Query: 301 ELWVMH---KNFWMKKLEFSRLMPTTLYGSDILVTWLSDYPSKVKFSNEVTGDCNYKTLE 360
           ELWVM    +  W KK EF    PT +YGSD L+   ++   KVKF N  TG+ +Y+ LE
Sbjct: 301 ELWVMEDYKERVWTKKWEFLVSNPTAVYGSDTLMAMENN--EKVKFCNVETGNYSYRQLE 360

Query: 361 QWHNIAPT--VFPFLSDFKSWN-FNPPQRSIQPKSLAKILR 393
             H       VFPF SDF+ W+ + PP RS  P ++A++LR
Sbjct: 361 PTHYYGSVLKVFPFSSDFEPWDYYPPPPRSPNPPTVAELLR 386

[Close]

BLAST of CSPI03G35980 vs. TAIR 10
Match: AT1G64290.1 (F-box protein-related )

HSP 1 Score: 102.1 bits (253), Expect = 1.1e-21
Identity = 111/393 (28.24%), Postives = 179/393 (45.55%), Query Frame = 0


Query: 5   EDVVLEILSRFYLNQAGKIQGLSKFYNNSSYNSYYKTLIAKNQPGIADGFLLQSPVPKSN 64
           +D++ E LS    ++ GK + L+K  N  SY S++  L       I+ G+ +Q  + K +
Sbjct: 8   QDMIQEFLSYLPASKIGKFRLLNKECNKRSYESWFVNLNLLRTNRIS-GYFIQHYIVKGH 67

Query: 65  DYIVSFVSPHNDSPVVPLNLSLSFLPGLNPKIRAV-APNGLLLCESQHSIRHNKRSI-YT 124
           +   SFV  H  S +    +S+ FLP    KI A  A +G+LLC     +++ K S  Y 
Sbjct: 68  ELRTSFV--HERSDLQNNGVSIDFLPPGMIKIEACDASHGILLC-----VKYTKPSRGYI 127

Query: 125 ITKLCTQQWKGLPIPKTRYFTKNIAMHVLRSNPLHFKILRLS-SDKIPSKR---PLPFSY 184
           + K  T+Q++ +P P+ + +  ++ + V+  NP  +KI RLS S ++   R    L    
Sbjct: 128 VFKPTTKQYQVIPKPEVKGWDMSLGLAVIGLNPFRYKIQRLSQSRRMCMSRGIYHLNHRT 187

Query: 185 TIIEVFDSKSWRWKLLDDIVHDYYGNFEFVDSNRAPVFANGLAHWKFTGNTTIFAFDFYS 244
            + EVFDS S+ WK L+++         F  SN  P+  +G  HW  + N  +  F   +
Sbjct: 188 FMCEVFDSDSFTWKRLENLRLPKTDRLIF--SN--PIQVSGFLHW-ISRNNNVIRFCLKT 247

Query: 245 DTWSKIAMPETIVNDENNSRVSAISVNSVREWRTELVEYEGKLGVLREFHQPFAPTALTE 304
           +TWS    P + V                    + LV YEGKLG +R++        + E
Sbjct: 248 ETWSFFHTPNSDV-------------------FSGLVRYEGKLGAIRQWTNK-DQEDVHE 307

Query: 305 LWVMHKNF---WMKKLEFSRLMPTTLYGSDILVTWLSDYPSK--VKFSNEVTGDCNYKTL 364
           LWV+  +F   W+K  +   +      G D L+TW    PS   V F +   G C Y   
Sbjct: 308 LWVLKSSFEKSWVKVKDIKSI------GVD-LITWT---PSNDVVLFRSSDRG-CLYNIN 356

Query: 365 EQWHNI----------APTVFPFLSDFKSWNFN 377
            +  N+          +   FPF SD++  + N
Sbjct: 368 AEKLNLVYAKKEGSDCSFVCFPFCSDYERVDLN 356

[Close]

BLAST of CSPI03G35980 vs. TAIR 10
Match: AT5G41720.1 (BEST Arabidopsis thaliana protein match is: F-box protein-related (TAIR:AT1G64290.1); Has 70 Blast hits to 70 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 53.9 bits (128), Expect = 3.4e-07
Identity = 51/162 (31.48%), Postives = 78/162 (48.15%), Query Frame = 0


Query: 6   DVVLEILSRFYLNQAGKIQGLSKFYNNSSYN-SYYKTLIAKNQPGIADGFLLQSPVPKSN 65
           DV+LEI+S     +  K + LSK  N  SY  S+    + +    +  G++      K  
Sbjct: 10  DVLLEIMSYCPATEMAKFRLLSKECNKRSYEMSFINRHLHRTNSFL--GYIFYYKDNKWF 69

Query: 66  DYIVSFVSPHNDSPVVPLNLSLSFLPGL-NPKIRAV-APNGLLLCESQHSIRHNKRSIYT 125
                FVS  ++     +N  L+FLP L N  I A    +G+LLC         K   Y 
Sbjct: 70  RNHSCFVSGVDEKDKNRIN--LAFLPPLCNVSIEACDTHHGILLCVDVVFKGRQKIPDYI 129

Query: 126 ITKLCTQQWKGLPIPKTRYFTKNIAMHVLRSNPLHFKILRLS 165
           + K  T+Q++ +P PKTR+ T    + V+ SNP  +KI+R+S
Sbjct: 130 VCKPATKQYRIIPNPKTRFGTVATGLMVISSNPFRYKIIRVS 167

The following BLAST results are available for this feature:

BLAST of CSPI03G35980 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NLE0	4.8e-06	31.48	F-box protein At5g41720 OS=Arabidopsis thaliana OX=3702 GN=At5g41720 PE=2 SV=1	[more]

BLAST of CSPI03G35980 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LBP1	6.8e-237	99.25	FBA_3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G785420 PE=4 ...	[more]
A0A1S3B7Y4	1.4e-157	72.18	F-box protein At5g49610-like OS=Cucumis melo OX=3656 GN=LOC103487156 PE=4 SV=1	[more]
A0A5D3DNY0	2.6e-143	67.25	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004950...	[more]
A0A5A7TPP2	2.6e-143	67.25	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G001090...	[more]
A0A6J1F395	4.1e-93	49.13	F-box protein At5g49610-like OS=Cucurbita moschata OX=3662 GN=LOC111441737 PE=4 ...	[more]

BLAST of CSPI03G35980 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136723.1	1.4e-236	99.25	F-box protein At5g49610 [Cucumis sativus] >KGN59248.1 hypothetical protein Csa_0...	[more]
XP_008443600.1	2.9e-157	72.18	PREDICTED: F-box protein At5g49610-like [Cucumis melo]	[more]
KAA0043777.1	5.3e-143	67.25	F-box protein [Cucumis melo var. makuwa]	[more]
TYK25356.1	5.3e-143	67.25	F-box protein [Cucumis melo var. makuwa]	[more]
XP_022934602.1	8.6e-93	49.13	F-box protein At5g49610-like [Cucurbita moschata]	[more]

BLAST of CSPI03G35980 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G64290.1	1.1e-21	28.24	F-box protein-related	[more]
AT5G41720.1	3.4e-07	31.48	BEST Arabidopsis thaliana protein match is: F-box protein-related (TAIR:AT1G6429...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013187	F-box associated domain, type 3	PFAM	PF08268	FBA_3	coord: 221..310 e-value: 1.3E-4 score: 21.9
None	No IPR available	PANTHER	PTHR35546	F-BOX PROTEIN INTERACTION DOMAIN PROTEIN-RELATED	coord: 3..373
None	No IPR available	PANTHER	PTHR35546:SF16	F-BOX PROTEIN	coord: 3..373

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G35980.1	CSPI03G35980.1	mRNA