CSPI03G35480 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G35480
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	NDR1/HIN1-like protein 10
Location	Chr3: 30971097 .. 30971678 (-)
RNA-Seq Expression	CSPI03G35480
Synteny	CSPI03G35480

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAGTTTATGGTGTCTTTTAATATCTGTTATTGTTGCTTTTGGTGTATCTTTTGGGTTCACAGTATTGATCTTATGGCTTGTTTTCATAACCCACAAGATCAAATTCAATGTAACAGATGCAACTCTAACCCAATTCAACTTCACCAACAATGACACACAGCTCCGATACAATCTTGGCATTTACTTCACCATTAGAAACCCTAATGAGCGTGTTGGAATATATTATGACACCATTGAAGCAACTGCAATGTATAAAGATCAAAACTTCGACACAAGATTGCTAACTCCATTTTACCAAACCCCAAAGACAACAAGCTTACTTAGAGGACGATTTGAAGGGCAACGGGCTGTGGTAATTAGCAACAACAAAGTTTCTGAATTGAATTCTGAGAAACTTGCTGGAGTTTATTCAATTGATGTCAAATTTCGTCTTTCGTTGAGGTTGAAATTCGGGATTTATAAAATTATTAGAGTTAGGCCTAAAGTGGAATGTGGATTCCAAGTTCCATTGAATTTTACTGGAACTTCTTCTTTTCCTTGGTTTCAAGATGCTATTGGTTGTCATGTCGATTATTGA

mRNA sequence

ATGGCAAGTTTATGGTGTCTTTTAATATCTGTTATTGTTGCTTTTGGTGTATCTTTTGGGTTCACAGTATTGATCTTATGGCTTGTTTTCATAACCCACAAGATCAAATTCAATGTAACAGATGCAACTCTAACCCAATTCAACTTCACCAACAATGACACACAGCTCCGATACAATCTTGGCATTTACTTCACCATTAGAAACCCTAATGAGCGTGTTGGAATATATTATGACACCATTGAAGCAACTGCAATGTATAAAGATCAAAACTTCGACACAAGATTGCTAACTCCATTTTACCAAACCCCAAAGACAACAAGCTTACTTAGAGGACGATTTGAAGGGCAACGGGCTGTGGTAATTAGCAACAACAAAGTTTCTGAATTGAATTCTGAGAAACTTGCTGGAGTTTATTCAATTGATGTCAAATTTCGTCTTTCGTTGAGGTTGAAATTCGGGATTTATAAAATTATTAGAGTTAGGCCTAAAGTGGAATGTGGATTCCAAGTTCCATTGAATTTTACTGGAACTTCTTCTTTTCCTTGGTTTCAAGATGCTATTGGTTGTCATGTCGATTATTGA

Coding sequence (CDS)

ATGGCAAGTTTATGGTGTCTTTTAATATCTGTTATTGTTGCTTTTGGTGTATCTTTTGGGTTCACAGTATTGATCTTATGGCTTGTTTTCATAACCCACAAGATCAAATTCAATGTAACAGATGCAACTCTAACCCAATTCAACTTCACCAACAATGACACACAGCTCCGATACAATCTTGGCATTTACTTCACCATTAGAAACCCTAATGAGCGTGTTGGAATATATTATGACACCATTGAAGCAACTGCAATGTATAAAGATCAAAACTTCGACACAAGATTGCTAACTCCATTTTACCAAACCCCAAAGACAACAAGCTTACTTAGAGGACGATTTGAAGGGCAACGGGCTGTGGTAATTAGCAACAACAAAGTTTCTGAATTGAATTCTGAGAAACTTGCTGGAGTTTATTCAATTGATGTCAAATTTCGTCTTTCGTTGAGGTTGAAATTCGGGATTTATAAAATTATTAGAGTTAGGCCTAAAGTGGAATGTGGATTCCAAGTTCCATTGAATTTTACTGGAACTTCTTCTTTTCCTTGGTTTCAAGATGCTATTGGTTGTCATGTCGATTATTGA

Protein sequence

MASLWCLLISVIVAFGVSFGFTVLILWLVFITHKIKFNVTDATLTQFNFTNNDTQLRYNLGIYFTIRNPNERVGIYYDTIEATAMYKDQNFDTRLLTPFYQTPKTTSLLRGRFEGQRAVVISNNKVSELNSEKLAGVYSIDVKFRLSLRLKFGIYKIIRVRPKVECGFQVPLNFTGTSSFPWFQDAIGCHVDY*

Homology

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BLAST of CSPI03G35480 vs. ExPASy Swiss-Prot
Match: Q9SJ52 (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.7e-36
Identity = 81/191 (42.41%), Postives = 121/191 (63.35%), Query Frame = 0


Query: 4   LWCLLISVIVAFGVSFGFTVLILWLVFITHKIKFNVTDATLTQFNFTNNDTQLRYNLGIY 63
           L  L + VI++  V  G   LI WL+     IKF+VTDA+LT+F+ T+ D  LRYNL + 
Sbjct: 37  LLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALT 96

Query: 64  FTIRNPNERVGIYYDTIEATAMYKDQNFDTRLLTPFYQTPKTTSLLRGRFEGQRAVVISN 123
             +RNPN+R+G+YYD IEA A Y+ + F T  LTPFYQ  K T++L   F+GQ  V+ + 
Sbjct: 97  VPVRNPNKRIGLYYDRIEAHAYYEGKRFSTITLTPFYQGHKNTTVLTPTFQGQNLVIFNA 156

Query: 124 NKVSELNSEKLAGVYSIDVKFRLSLRLKFGIYKIIRVRPKVEC-GFQVPLNFTGTSSFPW 183
            +   LN+E+++GVY+I++KFRL +R K G  K  R++PKV+C   ++PL+ +  ++   
Sbjct: 157 GQSRTLNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDCDDLRLPLSTSNGTTTTS 216

Query: 184 FQDAIGCHVDY 194
               I C  D+
Sbjct: 217 TVFPIKCDFDF 227

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BLAST of CSPI03G35480 vs. ExPASy Swiss-Prot
Match: Q9FNH6 (NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 2.9e-33
Identity = 77/190 (40.53%), Postives = 114/190 (60.00%), Query Frame = 0


Query: 7   LLISVIVAFGVSFGFTVLILWLVFITHKIKFNVTDATLTQFNF--TNNDTQLRYNLGIYF 66
           ++ ++++   V  G   LI+WL+F  + IKF+VTDA LT+F    TNN   LRYNL + F
Sbjct: 47  VIFNILITIAVLLGIAALIIWLIFRPNAIKFHVTDAKLTEFTLDPTNN---LRYNLDLNF 106

Query: 67  TIRNPNERVGIYYDTIEATAMYKDQNFD-TRLLTPFYQTPKTTSLLRGRFEGQRAVVISN 126
           TIRNPN R+G+YYD IE    Y DQ F  +  ++ FYQ  K T+++  +  GQ+ V++  
Sbjct: 107 TIRNPNRRIGVYYDEIEVRGYYGDQRFGMSNNISKFYQGHKNTTVVGTKLVGQQLVLLDG 166

Query: 127 NKVSELNSEKLAGVYSIDVKFRLSLRLKFGIYKIIRVRPKVECGFQVPLNFTGTSSFPWF 186
            +  +LN +  + +Y ID K RL +R KFG+ K  R +PK++C  +VPL    TS F + 
Sbjct: 167 GERKDLNEDVNSQIYRIDAKLRLKIRFKFGLIKSWRFKPKIKCDLKVPLTSNSTSGFVF- 226

Query: 187 QDAIGCHVDY 194
                C VD+
Sbjct: 227 -QPTKCDVDF 231

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BLAST of CSPI03G35480 vs. ExPASy Swiss-Prot
Match: Q9SRN1 (NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 8.8e-30
Identity = 70/178 (39.33%), Postives = 110/178 (61.80%), Query Frame = 0


Query: 7   LLISVIVAFGVSFGFTVLILWLVFITHKIKFNVTDATLTQFNFTNNDTQLRYNLGIYFTI 66
           L+ ++++A  V  G   LILWL+F  + +KF V DA L +F+F  N+  L Y+L + FTI
Sbjct: 54  LICNILIAVAVILGVAALILWLIFRPNAVKFYVADANLNRFSFDPNN-NLHYSLDLNFTI 113

Query: 67  RNPNERVGIYYDTIEATAMYKDQNFDTRLLTPFYQTPKTTSLLRGRFEGQRAVVISNNKV 126
           RNPN+RVG+YYD    +  Y DQ F +  ++ FYQ  K T+++  + EGQ  VV+ +   
Sbjct: 114 RNPNQRVGVYYDEFSVSGYYGDQRFGSANVSSFYQGHKNTTVILTKIEGQNLVVLGDGAR 173

Query: 127 SELNSEKLAGVYSIDVKFRLSLRLKFGIYKIIRVRPKVEC-GFQVPL---NFTGTSSF 181
           ++L  ++ +G+Y I+ K RLS+R KF   K  +++PK++C   ++PL   N TG   F
Sbjct: 174 TDLKDDEKSGIYRINAKLRLSVRFKFWFIKSWKLKPKIKCDDLKIPLGSSNSTGGFKF 230

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BLAST of CSPI03G35480 vs. ExPASy Swiss-Prot
Match: Q9C615 (Putative syntaxin-24 OS=Arabidopsis thaliana OX=3702 GN=SYP24 PE=3 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.6e-18
Identity = 51/148 (34.46%), Postives = 80/148 (54.05%), Query Frame = 0


Query: 32  THKIKFNVTDATLTQFNFTNNDTQLRYNLGIYFTIRNPNERVGIYYDTIEATAMYKDQNF 91
           ++ +KF V DA LT F+  +N+  L+Y+L +  +IRN    +GI+YD  EAT  Y +Q  
Sbjct: 4   SNDVKFQVYDAELTHFDLESNN-NLQYSLSLNLSIRNSKSSIGIHYDRFEATVYYMNQRL 63

Query: 92  DTRLLTPFYQTPKTTSLLRGRFEGQRAVVISNNKVSELNSEKLAGVYSIDVKFRLSLRLK 151
               +  FY   K T LLR  FEGQ  V++  N+  +   ++  GVY IDVK  ++ R+ 
Sbjct: 64  GAVPMPLFYLGSKNTMLLRALFEGQTLVLLKGNERKKFEDDQKTGVYRIDVKLSINFRVM 123

Query: 152 FGIYKIIRVRPKVECGFQVPLNFTGTSS 180
                   ++P V C  ++PL    ++S
Sbjct: 124 VLHLVTWPMKPVVRCHLKIPLALGSSNS 150

[Close]

BLAST of CSPI03G35480 vs. ExPASy Swiss-Prot
Match: Q8LD98 (NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=NHL6 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 5.9e-10
Identity = 49/164 (29.88%), Postives = 79/164 (48.17%), Query Frame = 0


Query: 5   WCLLISVIVAFGVSFGFTVLILWLVFITHKIKFNVTDATLTQFNFTNNDTQLRYNLGIYF 64
           +C L+ ++VA G S G    IL+LVF      +++    LT+F   N D+ L     +  
Sbjct: 70  FCFLLLLVVAVGASIG----ILYLVFKPKLPDYSIDRLQLTRFAL-NQDSSLTTAFNVTI 129

Query: 65  TIRNPNERVGIYY-DTIEATAMYKDQNFDTRLLTPFYQTPKTTSLLRGRFEGQRAVVISN 124
           T +NPNE++GIYY D  + T  Y +       L  FYQ  + T+++     GQ     S 
Sbjct: 130 TAKNPNEKIGIYYEDGSKITVWYMEHQLSNGSLPKFYQGHENTTVIYVEMTGQTQNA-SG 189

Query: 125 NKVSELNSEKLAGVYSIDVKFRLSLRLKFGIYKIIRVRPKVECG 168
            + +    ++  G   + ++    +R+KFG  K+  VR  V CG
Sbjct: 190 LRTTLEEQQQRTGNIPLRIRVNQPVRVKFGKLKLFEVRFLVRCG 227

[Close]

BLAST of CSPI03G35480 vs. ExPASy TrEMBL
Match: A0A0A0LGS2 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G778960 PE=4 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 2.8e-103
Identity = 191/193 (98.96%), Postives = 192/193 (99.48%), Query Frame = 0


Query: 1   MASLWCLLISVIVAFGVSFGFTVLILWLVFITHKIKFNVTDATLTQFNFTNNDTQLRYNL 60
           MASLWCLLISVIVAFGVSFGFTVLILWLVFITHKIKFNVTDATLTQFNFTNNDTQL+YNL
Sbjct: 23  MASLWCLLISVIVAFGVSFGFTVLILWLVFITHKIKFNVTDATLTQFNFTNNDTQLQYNL 82

Query: 61  GIYFTIRNPNERVGIYYDTIEATAMYKDQNFDTRLLTPFYQTPKTTSLLRGRFEGQRAVV 120
           GIYFTIRNPNERVGIYYDTIEATAMYKDQNFDTRLLTPFYQTPKTTSLLRGRFEGQRAVV
Sbjct: 83  GIYFTIRNPNERVGIYYDTIEATAMYKDQNFDTRLLTPFYQTPKTTSLLRGRFEGQRAVV 142

Query: 121 ISNNKVSELNSEKLAGVYSIDVKFRLSLRLKFGIYKIIRVRPKVECGFQVPLNFTGTSSF 180
           I NNKVSELNSEKLAGVYSIDVKFRLSLRLKFGIYKIIRVRPKVECGFQVPLNFTGTSSF
Sbjct: 143 IGNNKVSELNSEKLAGVYSIDVKFRLSLRLKFGIYKIIRVRPKVECGFQVPLNFTGTSSF 202

Query: 181 PWFQDAIGCHVDY 194
           PWFQDAIGCHVDY
Sbjct: 203 PWFQDAIGCHVDY 215

[Close]

BLAST of CSPI03G35480 vs. ExPASy TrEMBL
Match: A0A1S3B955 (protein YLS9-like OS=Cucumis melo OX=3656 GN=LOC103487147 PE=4 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 4.2e-99
Identity = 183/193 (94.82%), Postives = 188/193 (97.41%), Query Frame = 0


Query: 1   MASLWCLLISVIVAFGVSFGFTVLILWLVFITHKIKFNVTDATLTQFNFTNNDTQLRYNL 60
           MASLWCLLISVIVAFG SFGFTVLILWLVFITHKIKFNVTDATLTQFNFTNNDTQL+YNL
Sbjct: 1   MASLWCLLISVIVAFGASFGFTVLILWLVFITHKIKFNVTDATLTQFNFTNNDTQLQYNL 60

Query: 61  GIYFTIRNPNERVGIYYDTIEATAMYKDQNFDTRLLTPFYQTPKTTSLLRGRFEGQRAVV 120
           GIYFTIRNPNERVGIYYDTIEATAMYKDQNFDTRLLTPFYQTPKTTSLLRGRFEGQRAVV
Sbjct: 61  GIYFTIRNPNERVGIYYDTIEATAMYKDQNFDTRLLTPFYQTPKTTSLLRGRFEGQRAVV 120

Query: 121 ISNNKVSELNSEKLAGVYSIDVKFRLSLRLKFGIYKIIRVRPKVECGFQVPLNFTGTSSF 180
           I NNKVSEL SEKLAGVYS+DVKFRLSLRLKFGIYKI+RVRPKVEC FQVPLN +GTSSF
Sbjct: 121 IGNNKVSELKSEKLAGVYSVDVKFRLSLRLKFGIYKIVRVRPKVECRFQVPLNSSGTSSF 180

Query: 181 PWFQDAIGCHVDY 194
           PWFQ+AIGCHVDY
Sbjct: 181 PWFQEAIGCHVDY 193

[Close]

BLAST of CSPI03G35480 vs. ExPASy TrEMBL
Match: A0A5A7TR00 (Protein YLS9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G001580 PE=4 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 1.4e-78
Identity = 150/191 (78.53%), Postives = 169/191 (88.48%), Query Frame = 0


Query: 3   SLWCLLISVIVAFGVSFGFTVLILWLVFITHKIKFNVTDATLTQFNFTNNDTQLRYNLGI 62
           SLWC LIS+IV   +SFG ++LILWL+FIT+KIKFNVTDATLTQFNFTNNDTQL YNLG+
Sbjct: 5   SLWCFLISIIVVIAISFGGSILILWLIFITNKIKFNVTDATLTQFNFTNNDTQLHYNLGV 64

Query: 63  YFTIRNPNERVGIYYDTIEATAMYKDQNFDTRLLTPFYQTPKTTSLLRGRFEGQRAVVIS 122
           +FTIRNPN++VGIYYDTI+ATAMYK QNFDTRLLTPFYQ   TTSLL+GRFEGQ+ VVI 
Sbjct: 65  FFTIRNPNKQVGIYYDTIDATAMYKGQNFDTRLLTPFYQGSSTTSLLKGRFEGQQVVVIP 124

Query: 123 NNKVSELNSEKLAGVYSIDVKFRLSLRLKFGIYKIIRVRPKVECGFQVPLNFTGTSSFPW 182
           NN VSEL SEKL+GVYSIDV+FRLSLRLKFG++K IRVRPKV CGFQVPLN +G SS   
Sbjct: 125 NNTVSELKSEKLSGVYSIDVEFRLSLRLKFGLFKFIRVRPKVGCGFQVPLNSSGASS--- 184

Query: 183 FQDAIGCHVDY 194
           FQ+AIGC VDY
Sbjct: 185 FQNAIGCDVDY 192

[Close]

BLAST of CSPI03G35480 vs. ExPASy TrEMBL
Match: A0A1S3B970 (protein YLS9-like OS=Cucumis melo OX=3656 GN=LOC103487148 PE=4 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 1.4e-78
Identity = 150/191 (78.53%), Postives = 169/191 (88.48%), Query Frame = 0


Query: 3   SLWCLLISVIVAFGVSFGFTVLILWLVFITHKIKFNVTDATLTQFNFTNNDTQLRYNLGI 62
           SLWC LIS+IV   +SFG ++LILWL+FIT+KIKFNVTDATLTQFNFTNNDTQL YNLG+
Sbjct: 5   SLWCFLISIIVVIAISFGGSILILWLIFITNKIKFNVTDATLTQFNFTNNDTQLHYNLGV 64

Query: 63  YFTIRNPNERVGIYYDTIEATAMYKDQNFDTRLLTPFYQTPKTTSLLRGRFEGQRAVVIS 122
           +FTIRNPN++VGIYYDTI+ATAMYK QNFDTRLLTPFYQ   TTSLL+GRFEGQ+ VVI 
Sbjct: 65  FFTIRNPNKQVGIYYDTIDATAMYKGQNFDTRLLTPFYQGSSTTSLLKGRFEGQQVVVIP 124

Query: 123 NNKVSELNSEKLAGVYSIDVKFRLSLRLKFGIYKIIRVRPKVECGFQVPLNFTGTSSFPW 182
           NN VSEL SEKL+GVYSIDV+FRLSLRLKFG++K IRVRPKV CGFQVPLN +G SS   
Sbjct: 125 NNTVSELKSEKLSGVYSIDVEFRLSLRLKFGLFKFIRVRPKVGCGFQVPLNSSGASS--- 184

Query: 183 FQDAIGCHVDY 194
           FQ+AIGC VDY
Sbjct: 185 FQNAIGCDVDY 192

[Close]

BLAST of CSPI03G35480 vs. ExPASy TrEMBL
Match: A0A0A0LEQ7 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G778970 PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 5.3e-78
Identity = 149/191 (78.01%), Postives = 170/191 (89.01%), Query Frame = 0


Query: 3   SLWCLLISVIVAFGVSFGFTVLILWLVFITHKIKFNVTDATLTQFNFTNNDTQLRYNLGI 62
           S+WCLLISVI+AF +SFG ++LILWL+FIT+KIKF+VTDA LTQFNFTNNDTQL YNLG+
Sbjct: 4   SIWCLLISVIIAFAISFGGSLLILWLIFITNKIKFDVTDAILTQFNFTNNDTQLHYNLGV 63

Query: 63  YFTIRNPNERVGIYYDTIEATAMYKDQNFDTRLLTPFYQTPKTTSLLRGRFEGQRAVVIS 122
           +FTIRNPN+++GIYYDTIEATAMYK QNFDTRLLTPFYQ  +TTSLL+GRF+GQR VVI 
Sbjct: 64  FFTIRNPNKQIGIYYDTIEATAMYKGQNFDTRLLTPFYQGSRTTSLLKGRFQGQRVVVIP 123

Query: 123 NNKVSELNSEKLAGVYSIDVKFRLSLRLKFGIYKIIRVRPKVECGFQVPLNFTGTSSFPW 182
           NN VSEL SEKL+GVYSI+VKFRLS RLK G+YK IRVRPKV CGFQVPL  +GTSS   
Sbjct: 124 NNTVSELKSEKLSGVYSIEVKFRLSWRLKLGLYKFIRVRPKVGCGFQVPLTSSGTSS--- 183

Query: 183 FQDAIGCHVDY 194
           FQ+AIGC VDY
Sbjct: 184 FQNAIGCDVDY 191

[Close]

BLAST of CSPI03G35480 vs. NCBI nr
Match: XP_004136708.1 (NDR1/HIN1-like protein 10 [Cucumis sativus])

HSP 1 Score: 384.4 bits (986), Expect = 5.7e-103
Identity = 191/193 (98.96%), Postives = 192/193 (99.48%), Query Frame = 0


Query: 1   MASLWCLLISVIVAFGVSFGFTVLILWLVFITHKIKFNVTDATLTQFNFTNNDTQLRYNL 60
           MASLWCLLISVIVAFGVSFGFTVLILWLVFITHKIKFNVTDATLTQFNFTNNDTQL+YNL
Sbjct: 1   MASLWCLLISVIVAFGVSFGFTVLILWLVFITHKIKFNVTDATLTQFNFTNNDTQLQYNL 60

Query: 61  GIYFTIRNPNERVGIYYDTIEATAMYKDQNFDTRLLTPFYQTPKTTSLLRGRFEGQRAVV 120
           GIYFTIRNPNERVGIYYDTIEATAMYKDQNFDTRLLTPFYQTPKTTSLLRGRFEGQRAVV
Sbjct: 61  GIYFTIRNPNERVGIYYDTIEATAMYKDQNFDTRLLTPFYQTPKTTSLLRGRFEGQRAVV 120

Query: 121 ISNNKVSELNSEKLAGVYSIDVKFRLSLRLKFGIYKIIRVRPKVECGFQVPLNFTGTSSF 180
           I NNKVSELNSEKLAGVYSIDVKFRLSLRLKFGIYKIIRVRPKVECGFQVPLNFTGTSSF
Sbjct: 121 IGNNKVSELNSEKLAGVYSIDVKFRLSLRLKFGIYKIIRVRPKVECGFQVPLNFTGTSSF 180

Query: 181 PWFQDAIGCHVDY 194
           PWFQDAIGCHVDY
Sbjct: 181 PWFQDAIGCHVDY 193

[Close]

BLAST of CSPI03G35480 vs. NCBI nr
Match: XP_008443591.1 (PREDICTED: protein YLS9-like [Cucumis melo])

HSP 1 Score: 370.5 bits (950), Expect = 8.6e-99
Identity = 183/193 (94.82%), Postives = 188/193 (97.41%), Query Frame = 0


Query: 1   MASLWCLLISVIVAFGVSFGFTVLILWLVFITHKIKFNVTDATLTQFNFTNNDTQLRYNL 60
           MASLWCLLISVIVAFG SFGFTVLILWLVFITHKIKFNVTDATLTQFNFTNNDTQL+YNL
Sbjct: 1   MASLWCLLISVIVAFGASFGFTVLILWLVFITHKIKFNVTDATLTQFNFTNNDTQLQYNL 60

Query: 61  GIYFTIRNPNERVGIYYDTIEATAMYKDQNFDTRLLTPFYQTPKTTSLLRGRFEGQRAVV 120
           GIYFTIRNPNERVGIYYDTIEATAMYKDQNFDTRLLTPFYQTPKTTSLLRGRFEGQRAVV
Sbjct: 61  GIYFTIRNPNERVGIYYDTIEATAMYKDQNFDTRLLTPFYQTPKTTSLLRGRFEGQRAVV 120

Query: 121 ISNNKVSELNSEKLAGVYSIDVKFRLSLRLKFGIYKIIRVRPKVECGFQVPLNFTGTSSF 180
           I NNKVSEL SEKLAGVYS+DVKFRLSLRLKFGIYKI+RVRPKVEC FQVPLN +GTSSF
Sbjct: 121 IGNNKVSELKSEKLAGVYSVDVKFRLSLRLKFGIYKIVRVRPKVECRFQVPLNSSGTSSF 180

Query: 181 PWFQDAIGCHVDY 194
           PWFQ+AIGCHVDY
Sbjct: 181 PWFQEAIGCHVDY 193

[Close]

BLAST of CSPI03G35480 vs. NCBI nr
Match: XP_038904447.1 (NDR1/HIN1-like protein 10 [Benincasa hispida])

HSP 1 Score: 350.1 bits (897), Expect = 1.2e-92
Identity = 170/193 (88.08%), Postives = 182/193 (94.30%), Query Frame = 0


Query: 1   MASLWCLLISVIVAFGVSFGFTVLILWLVFITHKIKFNVTDATLTQFNFTNNDTQLRYNL 60
           MASLWCLL+ VI+ FGVSFGF+VLILWLVFITHKIKFNVTDATLTQFNFTNNDTQL YNL
Sbjct: 1   MASLWCLLMCVIIGFGVSFGFSVLILWLVFITHKIKFNVTDATLTQFNFTNNDTQLHYNL 60

Query: 61  GIYFTIRNPNERVGIYYDTIEATAMYKDQNFDTRLLTPFYQTPKTTSLLRGRFEGQRAVV 120
           G+YFTIRNPNE+VGIYYDTIEAT  YKDQNF TRLLTPFYQTPKTTSLL+GRFEGQ+ VV
Sbjct: 61  GVYFTIRNPNEQVGIYYDTIEATTSYKDQNFHTRLLTPFYQTPKTTSLLKGRFEGQQLVV 120

Query: 121 ISNNKVSELNSEKLAGVYSIDVKFRLSLRLKFGIYKIIRVRPKVECGFQVPLNFTGTSSF 180
           I+NNKVSE N+EKLAGVYSIDVKFRLSLRLKFG+YKIIRVRPKV CGFQ+PLN +GTSSF
Sbjct: 121 IANNKVSEFNTEKLAGVYSIDVKFRLSLRLKFGLYKIIRVRPKVGCGFQLPLNSSGTSSF 180

Query: 181 PWFQDAIGCHVDY 194
           PWFQ AIGCHVDY
Sbjct: 181 PWFQTAIGCHVDY 193

[Close]

BLAST of CSPI03G35480 vs. NCBI nr
Match: KAE8651105.1 (hypothetical protein Csa_001204 [Cucumis sativus])

HSP 1 Score: 339.0 bits (868), Expect = 2.8e-89
Identity = 166/168 (98.81%), Postives = 167/168 (99.40%), Query Frame = 0


Query: 23  VLILWLVFITHKIKFNVTDATLTQFNFTNNDTQLRYNLGIYFTIRNPNERVGIYYDTIEA 82
           VLILWLVFITHKIKFNVTDATLTQFNFTNNDTQL+YNLGIYFTIRNPNERVGIYYDTIEA
Sbjct: 186 VLILWLVFITHKIKFNVTDATLTQFNFTNNDTQLQYNLGIYFTIRNPNERVGIYYDTIEA 245

Query: 83  TAMYKDQNFDTRLLTPFYQTPKTTSLLRGRFEGQRAVVISNNKVSELNSEKLAGVYSIDV 142
           TAMYKDQNFDTRLLTPFYQTPKTTSLLRGRFEGQRAVVI NNKVSELNSEKLAGVYSIDV
Sbjct: 246 TAMYKDQNFDTRLLTPFYQTPKTTSLLRGRFEGQRAVVIGNNKVSELNSEKLAGVYSIDV 305

Query: 143 KFRLSLRLKFGIYKIIRVRPKVECGFQVPLNFTGTSSFPWFQDAIGCH 191
           KFRLSLRLKFGIYKIIRVRPKVECGFQVPLNFTGTSSFPWFQDAIGCH
Sbjct: 306 KFRLSLRLKFGIYKIIRVRPKVECGFQVPLNFTGTSSFPWFQDAIGCH 353

[Close]

BLAST of CSPI03G35480 vs. NCBI nr
Match: XP_008443592.1 (PREDICTED: protein YLS9-like [Cucumis melo] >KAA0043825.1 protein YLS9-like [Cucumis melo var. makuwa])

HSP 1 Score: 302.4 bits (773), Expect = 2.9e-78
Identity = 150/191 (78.53%), Postives = 169/191 (88.48%), Query Frame = 0


Query: 3   SLWCLLISVIVAFGVSFGFTVLILWLVFITHKIKFNVTDATLTQFNFTNNDTQLRYNLGI 62
           SLWC LIS+IV   +SFG ++LILWL+FIT+KIKFNVTDATLTQFNFTNNDTQL YNLG+
Sbjct: 5   SLWCFLISIIVVIAISFGGSILILWLIFITNKIKFNVTDATLTQFNFTNNDTQLHYNLGV 64

Query: 63  YFTIRNPNERVGIYYDTIEATAMYKDQNFDTRLLTPFYQTPKTTSLLRGRFEGQRAVVIS 122
           +FTIRNPN++VGIYYDTI+ATAMYK QNFDTRLLTPFYQ   TTSLL+GRFEGQ+ VVI 
Sbjct: 65  FFTIRNPNKQVGIYYDTIDATAMYKGQNFDTRLLTPFYQGSSTTSLLKGRFEGQQVVVIP 124

Query: 123 NNKVSELNSEKLAGVYSIDVKFRLSLRLKFGIYKIIRVRPKVECGFQVPLNFTGTSSFPW 182
           NN VSEL SEKL+GVYSIDV+FRLSLRLKFG++K IRVRPKV CGFQVPLN +G SS   
Sbjct: 125 NNTVSELKSEKLSGVYSIDVEFRLSLRLKFGLFKFIRVRPKVGCGFQVPLNSSGASS--- 184

Query: 183 FQDAIGCHVDY 194
           FQ+AIGC VDY
Sbjct: 185 FQNAIGCDVDY 192

[Close]

BLAST of CSPI03G35480 vs. TAIR 10
Match: AT2G35980.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 154.1 bits (388), Expect = 1.2e-37
Identity = 81/191 (42.41%), Postives = 121/191 (63.35%), Query Frame = 0


Query: 4   LWCLLISVIVAFGVSFGFTVLILWLVFITHKIKFNVTDATLTQFNFTNNDTQLRYNLGIY 63
           L  L + VI++  V  G   LI WL+     IKF+VTDA+LT+F+ T+ D  LRYNL + 
Sbjct: 37  LLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALT 96

Query: 64  FTIRNPNERVGIYYDTIEATAMYKDQNFDTRLLTPFYQTPKTTSLLRGRFEGQRAVVISN 123
             +RNPN+R+G+YYD IEA A Y+ + F T  LTPFYQ  K T++L   F+GQ  V+ + 
Sbjct: 97  VPVRNPNKRIGLYYDRIEAHAYYEGKRFSTITLTPFYQGHKNTTVLTPTFQGQNLVIFNA 156

Query: 124 NKVSELNSEKLAGVYSIDVKFRLSLRLKFGIYKIIRVRPKVEC-GFQVPLNFTGTSSFPW 183
            +   LN+E+++GVY+I++KFRL +R K G  K  R++PKV+C   ++PL+ +  ++   
Sbjct: 157 GQSRTLNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDCDDLRLPLSTSNGTTTTS 216

Query: 184 FQDAIGCHVDY 194
               I C  D+
Sbjct: 217 TVFPIKCDFDF 227

[Close]

BLAST of CSPI03G35480 vs. TAIR 10
Match: AT5G06320.1 (NDR1/HIN1-like 3 )

HSP 1 Score: 143.3 bits (360), Expect = 2.1e-34
Identity = 77/190 (40.53%), Postives = 114/190 (60.00%), Query Frame = 0


Query: 7   LLISVIVAFGVSFGFTVLILWLVFITHKIKFNVTDATLTQFNF--TNNDTQLRYNLGIYF 66
           ++ ++++   V  G   LI+WL+F  + IKF+VTDA LT+F    TNN   LRYNL + F
Sbjct: 47  VIFNILITIAVLLGIAALIIWLIFRPNAIKFHVTDAKLTEFTLDPTNN---LRYNLDLNF 106

Query: 67  TIRNPNERVGIYYDTIEATAMYKDQNFD-TRLLTPFYQTPKTTSLLRGRFEGQRAVVISN 126
           TIRNPN R+G+YYD IE    Y DQ F  +  ++ FYQ  K T+++  +  GQ+ V++  
Sbjct: 107 TIRNPNRRIGVYYDEIEVRGYYGDQRFGMSNNISKFYQGHKNTTVVGTKLVGQQLVLLDG 166

Query: 127 NKVSELNSEKLAGVYSIDVKFRLSLRLKFGIYKIIRVRPKVECGFQVPLNFTGTSSFPWF 186
            +  +LN +  + +Y ID K RL +R KFG+ K  R +PK++C  +VPL    TS F + 
Sbjct: 167 GERKDLNEDVNSQIYRIDAKLRLKIRFKFGLIKSWRFKPKIKCDLKVPLTSNSTSGFVF- 226

Query: 187 QDAIGCHVDY 194
                C VD+
Sbjct: 227 -QPTKCDVDF 231

[Close]

BLAST of CSPI03G35480 vs. TAIR 10
Match: AT2G35460.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 135.6 bits (340), Expect = 4.3e-32
Identity = 70/186 (37.63%), Postives = 105/186 (56.45%), Query Frame = 0


Query: 7   LLISVIVAFGVSFGFTVLILWLVFITHKIKFNVTDATLTQFNFTNNDTQLRYNLGIYFTI 66
           ++ ++++   V  G   LILW +   + +KF VT+A LT+F F      L YN+ + F+I
Sbjct: 53  IICNILIGVLVCLGVVALILWFILRPNVVKFQVTEADLTRFEFDPRSHNLHYNISLNFSI 112

Query: 67  RNPNERVGIYYDTIEATAMYKDQNFDTRLLTPFYQTPKTTSLLRGRFEGQRAVVISNNKV 126
           RNPN+R+GI+YD +E    Y DQ F    +T FYQ  K T+++     GQ+ V++     
Sbjct: 113 RNPNQRLGIHYDQLEVRGYYGDQRFSAANMTSFYQGHKNTTVVGTELNGQKLVLLGAGGR 172

Query: 127 SELNSEKLAGVYSIDVKFRLSLRLKFGIYKIIRVRPKVECGFQVPLNFTGTSSFPWFQDA 186
            +   ++ +GVY IDVK R  LR KFG      VRPK++C  +VPL+ T +S   +    
Sbjct: 173 RDFREDRRSGVYRIDVKLRFKLRFKFGFLNSWAVRPKIKCHLKVPLS-TSSSDERFQFHP 232

Query: 187 IGCHVD 193
             CHVD
Sbjct: 233 TKCHVD 237

[Close]

BLAST of CSPI03G35480 vs. TAIR 10
Match: AT3G11650.1 (NDR1/HIN1-like 2 )

HSP 1 Score: 131.7 bits (330), Expect = 6.2e-31
Identity = 70/178 (39.33%), Postives = 110/178 (61.80%), Query Frame = 0


Query: 7   LLISVIVAFGVSFGFTVLILWLVFITHKIKFNVTDATLTQFNFTNNDTQLRYNLGIYFTI 66
           L+ ++++A  V  G   LILWL+F  + +KF V DA L +F+F  N+  L Y+L + FTI
Sbjct: 54  LICNILIAVAVILGVAALILWLIFRPNAVKFYVADANLNRFSFDPNN-NLHYSLDLNFTI 113

Query: 67  RNPNERVGIYYDTIEATAMYKDQNFDTRLLTPFYQTPKTTSLLRGRFEGQRAVVISNNKV 126
           RNPN+RVG+YYD    +  Y DQ F +  ++ FYQ  K T+++  + EGQ  VV+ +   
Sbjct: 114 RNPNQRVGVYYDEFSVSGYYGDQRFGSANVSSFYQGHKNTTVILTKIEGQNLVVLGDGAR 173

Query: 127 SELNSEKLAGVYSIDVKFRLSLRLKFGIYKIIRVRPKVEC-GFQVPL---NFTGTSSF 181
           ++L  ++ +G+Y I+ K RLS+R KF   K  +++PK++C   ++PL   N TG   F
Sbjct: 174 TDLKDDEKSGIYRINAKLRLSVRFKFWFIKSWKLKPKIKCDDLKIPLGSSNSTGGFKF 230

[Close]

BLAST of CSPI03G35480 vs. TAIR 10
Match: AT5G22200.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 63.2 bits (152), Expect = 2.7e-10
Identity = 51/179 (28.49%), Postives = 81/179 (45.25%), Query Frame = 0


Query: 17  VSFGFTVLILWLVFITHKIKFNVTDATLTQFNFTNNDTQLRYNLGIYFTIRNPNERVGIY 76
           V+  F V ++W +   H  +F + D T+  FN  +    L  NL +  + RNPN+++GI+
Sbjct: 33  VAVAFVVFLVWAILHPHGPRFVLQDVTINDFN-VSQPNFLSSNLQVTVSSRNPNDKIGIF 92

Query: 77  YDTIEATAMYKDQNFD-TRLLTPFYQTPKTTSLLRGRFEGQRAVVISNNKVSELNSEKLA 136
           YD ++    Y++Q     RLL   YQ     ++      G  AV ++    S LN +  A
Sbjct: 93  YDRLDIYVTYRNQEVTLARLLPSTYQGHLEVTVWSPFLIGS-AVPVAPYLSSALNEDLFA 152

Query: 137 GVYSIDVKFRLSLRLKFGIYKIIRVRPKVECG--FQVPLNFTGTSSFPWFQDAIGCHVD 193
           G+  +++K    +R K G +     R  V C     V    TGT     +Q    C VD
Sbjct: 153 GLVLLNIKIDGWVRWKVGSWVSGSYRLHVNCPAFITVTGKLTGTGPAIKYQLVQRCAVD 209

The following BLAST results are available for this feature:

BLAST of CSPI03G35480 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SJ52	1.7e-36	42.41	NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1	[more]
Q9FNH6	2.9e-33	40.53	NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1	[more]
Q9SRN1	8.8e-30	39.33	NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1	[more]
Q9C615	1.6e-18	34.46	Putative syntaxin-24 OS=Arabidopsis thaliana OX=3702 GN=SYP24 PE=3 SV=1	[more]
Q8LD98	5.9e-10	29.88	NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=NHL6 PE=1 SV=1	[more]

BLAST of CSPI03G35480 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LGS2	2.8e-103	98.96	LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G778960 PE=4 ...	[more]
A0A1S3B955	4.2e-99	94.82	protein YLS9-like OS=Cucumis melo OX=3656 GN=LOC103487147 PE=4 SV=1	[more]
A0A5A7TR00	1.4e-78	78.53	Protein YLS9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G00...	[more]
A0A1S3B970	1.4e-78	78.53	protein YLS9-like OS=Cucumis melo OX=3656 GN=LOC103487148 PE=4 SV=1	[more]
A0A0A0LEQ7	5.3e-78	78.01	LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G778970 PE=4 ...	[more]

BLAST of CSPI03G35480 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136708.1	5.7e-103	98.96	NDR1/HIN1-like protein 10 [Cucumis sativus]	[more]
XP_008443591.1	8.6e-99	94.82	PREDICTED: protein YLS9-like [Cucumis melo]	[more]
XP_038904447.1	1.2e-92	88.08	NDR1/HIN1-like protein 10 [Benincasa hispida]	[more]
KAE8651105.1	2.8e-89	98.81	hypothetical protein Csa_001204 [Cucumis sativus]	[more]
XP_008443592.1	2.9e-78	78.53	PREDICTED: protein YLS9-like [Cucumis melo] >KAA0043825.1 protein YLS9-like [Cuc...	[more]

BLAST of CSPI03G35480 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G35980.1	1.2e-37	42.41	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT5G06320.1	2.1e-34	40.53	NDR1/HIN1-like 3	[more]
AT2G35460.1	4.3e-32	37.63	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G11650.1	6.2e-31	39.33	NDR1/HIN1-like 2	[more]
AT5G22200.1	2.7e-10	28.49	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 64..166 e-value: 1.3E-12 score: 48.1
None	No IPR available	PANTHER	PTHR31415:SF105	LATE EMBRYOGENESIS ABUNDANT PROTEIN	coord: 4..185
IPR044839	Protein NDR1-like	PANTHER	PTHR31415	OS05G0367900 PROTEIN	coord: 4..185

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G35480.1	CSPI03G35480.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098542	defense response to other organism
cellular_component	GO:0016021	integral component of membrane