CSPI03G35400 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G35400
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Early nodulin-20-like
Location	Chr3: 30901410 .. 30901916 (-)
RNA-Seq Expression	CSPI03G35400
Synteny	CSPI03G35400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGACACCTCCGCTCTAAAACCAGACTCACCGTTCTCCAACCTCCGCCGGAGAAACTCCATCACGGTCCCCGTCGCCGTCCCATCTAAATTAAACCTTCTCGCCGCCACCAAGTCCTCCCGCGGTGCCGAAGCTTCCCCGCGGTTACCCTTGGCTTTCGAGCTCGTCCCAATAAAATCCTCTTCCTCTGGGTCGTCTCCTTCCCTTGCATACACTTCCCTCAAAGACATTTTGCCGTCGCCCACCGCCAGCAGCTCCCCCACCGCCGTCTCTGCTGCGAATTCAGGGTACGAGATCTCGATCCGCAACCGCCTAGTGAAGCAGGCGGCGTGGGCTTATCTTCAGCCGATGTCTTCCTCTCCAGGCTCCTCTGGACCTCACCTCCTCCGCCGTATTTGGCTTAGATTTTCAGCTTGTCTTAGCTTCCTCAACCTGCCCATAATTTCAAGTATAACCAACGCTTTTGATCGGATATTTCGCGTTGTTGGGATCAATTTTGTCTAA

mRNA sequence

ATGGACGACACCTCCGCTCTAAAACCAGACTCACCGTTCTCCAACCTCCGCCGGAGAAACTCCATCACGGTCCCCGTCGCCGTCCCATCTAAATTAAACCTTCTCGCCGCCACCAAGTCCTCCCGCGGTGCCGAAGCTTCCCCGCGGTTACCCTTGGCTTTCGAGCTCGTCCCAATAAAATCCTCTTCCTCTGGGTCGTCTCCTTCCCTTGCATACACTTCCCTCAAAGACATTTTGCCGTCGCCCACCGCCAGCAGCTCCCCCACCGCCGTCTCTGCTGCGAATTCAGGGTACGAGATCTCGATCCGCAACCGCCTAGTGAAGCAGGCGGCGTGGGCTTATCTTCAGCCGATGTCTTCCTCTCCAGGCTCCTCTGGACCTCACCTCCTCCGCCGTATTTGGCTTAGATTTTCAGCTTGTCTTAGCTTCCTCAACCTGCCCATAATTTCAAGTATAACCAACGCTTTTGATCGGATATTTCGCGTTGTTGGGATCAATTTTGTCTAA

Coding sequence (CDS)

ATGGACGACACCTCCGCTCTAAAACCAGACTCACCGTTCTCCAACCTCCGCCGGAGAAACTCCATCACGGTCCCCGTCGCCGTCCCATCTAAATTAAACCTTCTCGCCGCCACCAAGTCCTCCCGCGGTGCCGAAGCTTCCCCGCGGTTACCCTTGGCTTTCGAGCTCGTCCCAATAAAATCCTCTTCCTCTGGGTCGTCTCCTTCCCTTGCATACACTTCCCTCAAAGACATTTTGCCGTCGCCCACCGCCAGCAGCTCCCCCACCGCCGTCTCTGCTGCGAATTCAGGGTACGAGATCTCGATCCGCAACCGCCTAGTGAAGCAGGCGGCGTGGGCTTATCTTCAGCCGATGTCTTCCTCTCCAGGCTCCTCTGGACCTCACCTCCTCCGCCGTATTTGGCTTAGATTTTCAGCTTGTCTTAGCTTCCTCAACCTGCCCATAATTTCAAGTATAACCAACGCTTTTGATCGGATATTTCGCGTTGTTGGGATCAATTTTGTCTAA

Protein sequence

MDDTSALKPDSPFSNLRRRNSITVPVAVPSKLNLLAATKSSRGAEASPRLPLAFELVPIKSSSSGSSPSLAYTSLKDILPSPTASSSPTAVSAANSGYEISIRNRLVKQAAWAYLQPMSSSPGSSGPHLLRRIWLRFSACLSFLNLPIISSITNAFDRIFRVVGINFV*

Homology

[Close]

BLAST of CSPI03G35400 vs. ExPASy TrEMBL
Match: A0A0A0LE45 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G778400 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 4.0e-82
Identity = 167/168 (99.40%), Postives = 167/168 (99.40%), Query Frame = 0


Query: 1   MDDTSALKPDSPFSNLRRRNSITVPVAVPSKLNLLAATKSSRGAEASPRLPLAFELVPIK 60
           MDDTSALKPDSPFSNLRRRNSITVPVAVPSKLNLLAATKSSRGAEASPRLPLAFELVPIK
Sbjct: 1   MDDTSALKPDSPFSNLRRRNSITVPVAVPSKLNLLAATKSSRGAEASPRLPLAFELVPIK 60

Query: 61  SSSSGSSPSLAYTSLKDILPSPTASSSPTAVSAANSGYEISIRNRLVKQAAWAYLQPMSS 120
           SSSS SSPSLAYTSLKDILPSPTASSSPTAVSAANSGYEISIRNRLVKQAAWAYLQPMSS
Sbjct: 61  SSSSESSPSLAYTSLKDILPSPTASSSPTAVSAANSGYEISIRNRLVKQAAWAYLQPMSS 120

Query: 121 SPGSSGPHLLRRIWLRFSACLSFLNLPIISSITNAFDRIFRVVGINFV 169
           SPGSSGPHLLRRIWLRFSACLSFLNLPIISSITNAFDRIFRVVGINFV
Sbjct: 121 SPGSSGPHLLRRIWLRFSACLSFLNLPIISSITNAFDRIFRVVGINFV 168

[Close]

BLAST of CSPI03G35400 vs. ExPASy TrEMBL
Match: A0A5A7TKK1 (Putative COPII coat assembly protein SEC16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004370 PE=4 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 9.3e-79
Identity = 161/168 (95.83%), Postives = 163/168 (97.02%), Query Frame = 0


Query: 1   MDDTSALKPDSPFSNLRRRNSITVPVAVPSKLNLLAATKSSRGAEASPRLPLAFELVPIK 60
           MD+TSALKPD PFSNLRRRNSITVPVAVPSKLNLLAATK SRGAEASP LPLAFELVPIK
Sbjct: 1   MDETSALKPDPPFSNLRRRNSITVPVAVPSKLNLLAATKPSRGAEASPPLPLAFELVPIK 60

Query: 61  SSSSGSSPSLAYTSLKDILPSPTASSSPTAVSAANSGYEISIRNRLVKQAAWAYLQPMSS 120
           SSSSGSSPSLAYTSL+DILPS TASSSPTA SAANSGYEISIRNRLVKQAAWAYLQPMSS
Sbjct: 61  SSSSGSSPSLAYTSLRDILPSNTASSSPTAASAANSGYEISIRNRLVKQAAWAYLQPMSS 120

Query: 121 SPGSSGPHLLRRIWLRFSACLSFLNLPIISSITNAFDRIFRVVGINFV 169
           SPGSSGPHLLRRIWLRFSACLSFLNLPIISSITNAFDRIFRVVGINFV
Sbjct: 121 SPGSSGPHLLRRIWLRFSACLSFLNLPIISSITNAFDRIFRVVGINFV 168

[Close]

BLAST of CSPI03G35400 vs. ExPASy TrEMBL
Match: A0A1S3B6B1 (uncharacterized protein LOC103486660 OS=Cucumis melo OX=3656 GN=LOC103486660 PE=4 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 9.3e-79
Identity = 161/168 (95.83%), Postives = 163/168 (97.02%), Query Frame = 0


Query: 1   MDDTSALKPDSPFSNLRRRNSITVPVAVPSKLNLLAATKSSRGAEASPRLPLAFELVPIK 60
           MD+TSALKPD PFSNLRRRNSITVPVAVPSKLNLLAATK SRGAEASP LPLAFELVPIK
Sbjct: 1   MDETSALKPDPPFSNLRRRNSITVPVAVPSKLNLLAATKPSRGAEASPPLPLAFELVPIK 60

Query: 61  SSSSGSSPSLAYTSLKDILPSPTASSSPTAVSAANSGYEISIRNRLVKQAAWAYLQPMSS 120
           SSSSGSSPSLAYTSL+DILPS TASSSPTA SAANSGYEISIRNRLVKQAAWAYLQPMSS
Sbjct: 61  SSSSGSSPSLAYTSLRDILPSNTASSSPTAASAANSGYEISIRNRLVKQAAWAYLQPMSS 120

Query: 121 SPGSSGPHLLRRIWLRFSACLSFLNLPIISSITNAFDRIFRVVGINFV 169
           SPGSSGPHLLRRIWLRFSACLSFLNLPIISSITNAFDRIFRVVGINFV
Sbjct: 121 SPGSSGPHLLRRIWLRFSACLSFLNLPIISSITNAFDRIFRVVGINFV 168

[Close]

BLAST of CSPI03G35400 vs. ExPASy TrEMBL
Match: A0A6J1F639 (uncharacterized protein LOC111442465 OS=Cucurbita moschata OX=3662 GN=LOC111442465 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 3.7e-67
Identity = 142/168 (84.52%), Postives = 152/168 (90.48%), Query Frame = 0


Query: 1   MDDTSALKPDSPFSNLRRRNSITVPVAVPSKLNLLAATKSSRGAEASPRLPLAFELVPIK 60
           MD TSALKPD P  NLRRRNSITVPV VPSKL+LLAATKSSRG  +SP+LPLAFELVPIK
Sbjct: 1   MDQTSALKPDPPLPNLRRRNSITVPVVVPSKLSLLAATKSSRGVASSPQLPLAFELVPIK 60

Query: 61  SSSSGSSPSLAYTSLKDILPSPTASSSPTAVSAANSGYEISIRNRLVKQAAWAYLQPMSS 120
           SSS  SSPSLAYTSL+DILPS TA  SPTA SAANSGYEISIRNRLVKQAAWAYLQPM+S
Sbjct: 61  SSS--SSPSLAYTSLRDILPSATAIYSPTAASAANSGYEISIRNRLVKQAAWAYLQPMAS 120

Query: 121 SPGSSGPHLLRRIWLRFSACLSFLNLPIISSITNAFDRIFRVVGINFV 169
           SP SSGPHLL RIWLRFSA LSF+NLPIISS+TNAF+RIFRVVG++FV
Sbjct: 121 SPSSSGPHLLHRIWLRFSAWLSFVNLPIISSVTNAFNRIFRVVGVSFV 166

[Close]

BLAST of CSPI03G35400 vs. ExPASy TrEMBL
Match: A0A6J1J4V9 (uncharacterized protein LOC111481768 OS=Cucurbita maxima OX=3661 GN=LOC111481768 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.4e-66
Identity = 143/168 (85.12%), Postives = 150/168 (89.29%), Query Frame = 0


Query: 1   MDDTSALKPDSPFSNLRRRNSITVPVAVPSKLNLLAATKSSRGAEASPRLPLAFELVPIK 60
           MD TSALKPD P  NLRRRNSITVPV V SKLNLLAATKSSRG  +SP LPLAFELVPIK
Sbjct: 1   MDQTSALKPDPPLPNLRRRNSITVPVVVSSKLNLLAATKSSRGVASSPPLPLAFELVPIK 60

Query: 61  SSSSGSSPSLAYTSLKDILPSPTASSSPTAVSAANSGYEISIRNRLVKQAAWAYLQPMSS 120
           SSS  SSPSLAYTSL+DILPS TA  SPTA SAANSGYEISIRNRLVKQAAWAYLQPM+S
Sbjct: 61  SSS--SSPSLAYTSLRDILPSATAIYSPTAASAANSGYEISIRNRLVKQAAWAYLQPMAS 120

Query: 121 SPGSSGPHLLRRIWLRFSACLSFLNLPIISSITNAFDRIFRVVGINFV 169
           SP SSGPHLL RIWLRFSA LSF+NLPIISSITNAF+RIFRVVG++FV
Sbjct: 121 SPSSSGPHLLHRIWLRFSAWLSFVNLPIISSITNAFNRIFRVVGVSFV 166

[Close]

BLAST of CSPI03G35400 vs. NCBI nr
Match: XP_011652026.1 (uncharacterized protein LOC105434978 [Cucumis sativus] >KGN59184.1 hypothetical protein Csa_001918 [Cucumis sativus])

HSP 1 Score: 313.9 bits (803), Expect = 8.3e-82
Identity = 167/168 (99.40%), Postives = 167/168 (99.40%), Query Frame = 0


Query: 1   MDDTSALKPDSPFSNLRRRNSITVPVAVPSKLNLLAATKSSRGAEASPRLPLAFELVPIK 60
           MDDTSALKPDSPFSNLRRRNSITVPVAVPSKLNLLAATKSSRGAEASPRLPLAFELVPIK
Sbjct: 1   MDDTSALKPDSPFSNLRRRNSITVPVAVPSKLNLLAATKSSRGAEASPRLPLAFELVPIK 60

Query: 61  SSSSGSSPSLAYTSLKDILPSPTASSSPTAVSAANSGYEISIRNRLVKQAAWAYLQPMSS 120
           SSSS SSPSLAYTSLKDILPSPTASSSPTAVSAANSGYEISIRNRLVKQAAWAYLQPMSS
Sbjct: 61  SSSSESSPSLAYTSLKDILPSPTASSSPTAVSAANSGYEISIRNRLVKQAAWAYLQPMSS 120

Query: 121 SPGSSGPHLLRRIWLRFSACLSFLNLPIISSITNAFDRIFRVVGINFV 169
           SPGSSGPHLLRRIWLRFSACLSFLNLPIISSITNAFDRIFRVVGINFV
Sbjct: 121 SPGSSGPHLLRRIWLRFSACLSFLNLPIISSITNAFDRIFRVVGINFV 168

[Close]

BLAST of CSPI03G35400 vs. NCBI nr
Match: XP_008442897.1 (PREDICTED: uncharacterized protein LOC103486660 [Cucumis melo] >KAA0043832.1 putative COPII coat assembly protein SEC16 [Cucumis melo var. makuwa] >TYK25301.1 putative COPII coat assembly protein SEC16 [Cucumis melo var. makuwa])

HSP 1 Score: 302.8 bits (774), Expect = 1.9e-78
Identity = 161/168 (95.83%), Postives = 163/168 (97.02%), Query Frame = 0


Query: 1   MDDTSALKPDSPFSNLRRRNSITVPVAVPSKLNLLAATKSSRGAEASPRLPLAFELVPIK 60
           MD+TSALKPD PFSNLRRRNSITVPVAVPSKLNLLAATK SRGAEASP LPLAFELVPIK
Sbjct: 1   MDETSALKPDPPFSNLRRRNSITVPVAVPSKLNLLAATKPSRGAEASPPLPLAFELVPIK 60

Query: 61  SSSSGSSPSLAYTSLKDILPSPTASSSPTAVSAANSGYEISIRNRLVKQAAWAYLQPMSS 120
           SSSSGSSPSLAYTSL+DILPS TASSSPTA SAANSGYEISIRNRLVKQAAWAYLQPMSS
Sbjct: 61  SSSSGSSPSLAYTSLRDILPSNTASSSPTAASAANSGYEISIRNRLVKQAAWAYLQPMSS 120

Query: 121 SPGSSGPHLLRRIWLRFSACLSFLNLPIISSITNAFDRIFRVVGINFV 169
           SPGSSGPHLLRRIWLRFSACLSFLNLPIISSITNAFDRIFRVVGINFV
Sbjct: 121 SPGSSGPHLLRRIWLRFSACLSFLNLPIISSITNAFDRIFRVVGINFV 168

[Close]

BLAST of CSPI03G35400 vs. NCBI nr
Match: XP_038904448.1 (uncharacterized protein LOC120090813 [Benincasa hispida])

HSP 1 Score: 271.6 bits (693), Expect = 4.7e-69
Identity = 146/168 (86.90%), Postives = 152/168 (90.48%), Query Frame = 0


Query: 1   MDDTSALKPDSPFSNLRRRNSITVPVAVPSKLNLLAATKSSRGAEASPRLPLAFELVPIK 60
           MD+TSALKPD P SNLRRRNSIT+PVAVPSKLNLLA TK+     ASP LPLAFELVPIK
Sbjct: 1   MDETSALKPDPPLSNLRRRNSITLPVAVPSKLNLLAPTKA-----ASPPLPLAFELVPIK 60

Query: 61  SSSSGSSPSLAYTSLKDILPSPTASSSPTAVSAANSGYEISIRNRLVKQAAWAYLQPMSS 120
           SSSS SSPSLAYTSL+DILPS TA SSPTA SAANSGYEI+IRNRLVKQAAWAYLQPMSS
Sbjct: 61  SSSSASSPSLAYTSLRDILPSATAISSPTAASAANSGYEITIRNRLVKQAAWAYLQPMSS 120

Query: 121 SPGSSGPHLLRRIWLRFSACLSFLNLPIISSITNAFDRIFRVVGINFV 169
           SPGSSGPHL RRIWLRFSACLSFLNLPIIS I NAFDRIFRVVG+NFV
Sbjct: 121 SPGSSGPHLFRRIWLRFSACLSFLNLPIISRIANAFDRIFRVVGVNFV 163

[Close]

BLAST of CSPI03G35400 vs. NCBI nr
Match: XP_023526406.1 (uncharacterized protein LOC111789917 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 264.6 bits (675), Expect = 5.8e-67
Identity = 143/168 (85.12%), Postives = 151/168 (89.88%), Query Frame = 0


Query: 1   MDDTSALKPDSPFSNLRRRNSITVPVAVPSKLNLLAATKSSRGAEASPRLPLAFELVPIK 60
           MD TSALKPD P  NLRRRNSITVPV VPSKLNLLAATKSSRG  +SP LPLAFELVPIK
Sbjct: 1   MDQTSALKPDPPLPNLRRRNSITVPVVVPSKLNLLAATKSSRGVASSPPLPLAFELVPIK 60

Query: 61  SSSSGSSPSLAYTSLKDILPSPTASSSPTAVSAANSGYEISIRNRLVKQAAWAYLQPMSS 120
           SSS  SSPSLAYTSL+DILPS TA  SPTA SAANSGYEISIRNRLVKQAAWAYLQPM+S
Sbjct: 61  SSSP-SSPSLAYTSLRDILPSATAIYSPTAASAANSGYEISIRNRLVKQAAWAYLQPMAS 120

Query: 121 SPGSSGPHLLRRIWLRFSACLSFLNLPIISSITNAFDRIFRVVGINFV 169
           SP SSGPHLL RIWLRFSA LSF+NLPIISS+TNAF+RIFRVVG++FV
Sbjct: 121 SPSSSGPHLLHRIWLRFSAWLSFVNLPIISSVTNAFNRIFRVVGVSFV 167

[Close]

BLAST of CSPI03G35400 vs. NCBI nr
Match: XP_022935679.1 (uncharacterized protein LOC111442465 [Cucurbita moschata])

HSP 1 Score: 264.2 bits (674), Expect = 7.5e-67
Identity = 142/168 (84.52%), Postives = 152/168 (90.48%), Query Frame = 0


Query: 1   MDDTSALKPDSPFSNLRRRNSITVPVAVPSKLNLLAATKSSRGAEASPRLPLAFELVPIK 60
           MD TSALKPD P  NLRRRNSITVPV VPSKL+LLAATKSSRG  +SP+LPLAFELVPIK
Sbjct: 1   MDQTSALKPDPPLPNLRRRNSITVPVVVPSKLSLLAATKSSRGVASSPQLPLAFELVPIK 60

Query: 61  SSSSGSSPSLAYTSLKDILPSPTASSSPTAVSAANSGYEISIRNRLVKQAAWAYLQPMSS 120
           SSS  SSPSLAYTSL+DILPS TA  SPTA SAANSGYEISIRNRLVKQAAWAYLQPM+S
Sbjct: 61  SSS--SSPSLAYTSLRDILPSATAIYSPTAASAANSGYEISIRNRLVKQAAWAYLQPMAS 120

Query: 121 SPGSSGPHLLRRIWLRFSACLSFLNLPIISSITNAFDRIFRVVGINFV 169
           SP SSGPHLL RIWLRFSA LSF+NLPIISS+TNAF+RIFRVVG++FV
Sbjct: 121 SPSSSGPHLLHRIWLRFSAWLSFVNLPIISSVTNAFNRIFRVVGVSFV 166

[Close]

BLAST of CSPI03G35400 vs. TAIR 10
Match: AT5G06280.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G52520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 71.6 bits (174), Expect = 6.7e-13
Identity = 62/163 (38.04%), Postives = 81/163 (49.69%), Query Frame = 0


Query: 11  SPFSNLRRRNSITVPVAVPSKLNLLAATKSSRGAEASPRLPLAFELVPIKSSSSGSSPSL 70
           SP + LRR  SI       S +  L   +      ++P     +EL+ +K SS      +
Sbjct: 8   SPATQLRRTKSI-------SNMTTLTPPEVPFDIASTPPSSFDYELISVKPSS-----FV 67

Query: 71  AYTSLKDILPSPTASS----------SPTAVSAANSGYEISIRNRLVKQAAWAYLQP--M 130
           AYTSL+DI+ SP  SS          SP   +AA    +ISIRNRLVKQAA +YLQP  +
Sbjct: 68  AYTSLRDIISSPINSSLNLPSINGSCSPVISTAAG---DISIRNRLVKQAALSYLQPTVL 127

Query: 131 SSSPGSSGPHLLRRIWLRFSACLSFLNLPIISSITNAFDRIFR 162
           +SS  S+G    RR+WL  SA   FL           FD IF+
Sbjct: 128 TSSDDSAGSQFFRRVWLHLSAGFQFLR--------RVFDWIFQ 147

[Close]

BLAST of CSPI03G35400 vs. TAIR 10
Match: AT5G06280.3 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G52520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 71.6 bits (174), Expect = 6.7e-13
Identity = 62/163 (38.04%), Postives = 81/163 (49.69%), Query Frame = 0


Query: 11  SPFSNLRRRNSITVPVAVPSKLNLLAATKSSRGAEASPRLPLAFELVPIKSSSSGSSPSL 70
           SP + LRR  SI       S +  L   +      ++P     +EL+ +K SS      +
Sbjct: 8   SPATQLRRTKSI-------SNMTTLTPPEVPFDIASTPPSSFDYELISVKPSS-----FV 67

Query: 71  AYTSLKDILPSPTASS----------SPTAVSAANSGYEISIRNRLVKQAAWAYLQP--M 130
           AYTSL+DI+ SP  SS          SP   +AA    +ISIRNRLVKQAA +YLQP  +
Sbjct: 68  AYTSLRDIISSPINSSLNLPSINGSCSPVISTAAG---DISIRNRLVKQAALSYLQPTVL 127

Query: 131 SSSPGSSGPHLLRRIWLRFSACLSFLNLPIISSITNAFDRIFR 162
           +SS  S+G    RR+WL  SA   FL           FD IF+
Sbjct: 128 TSSDDSAGSQFFRRVWLHLSAGFQFLR--------RVFDWIFQ 147

[Close]

BLAST of CSPI03G35400 vs. TAIR 10
Match: AT3G52520.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06280.3); Has 24 Blast hits to 24 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 66.2 bits (160), Expect = 2.8e-11
Identity = 53/113 (46.90%), Postives = 66/113 (58.41%), Query Frame = 0


Query: 52  LAFELVPIKSSSSGSSPSLAYTSLKDILP-SPTASSSPT---AVSAANSGYEISIRNRLV 111
           L  ELV +  SS    P   YTSLKDILP S T   SP    AV++A SG  I+IRNRLV
Sbjct: 23  LDLELVSVNKSSEDPLP--CYTSLKDILPSSSTTVDSPAISFAVASAVSGPTITIRNRLV 82

Query: 112 KQAAWAYLQPMSSSPGSSGPHLLRRIWLRFSACLSFLNLPIISSITNAFDRIF 161
           KQAA +YLQP + +P SS P  LRR+   F        + ++S+  +A  RIF
Sbjct: 83  KQAACSYLQPSTPTP-SSNPSFLRRVSSSF--------IRLVSAFFDALLRIF 124

The following BLAST results are available for this feature:

BLAST of CSPI03G35400 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI03G35400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LE45	4.0e-82	99.40	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G778400 PE=4 SV=1	[more]
A0A5A7TKK1	9.3e-79	95.83	Putative COPII coat assembly protein SEC16 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3B6B1	9.3e-79	95.83	uncharacterized protein LOC103486660 OS=Cucumis melo OX=3656 GN=LOC103486660 PE=...	[more]
A0A6J1F639	3.7e-67	84.52	uncharacterized protein LOC111442465 OS=Cucurbita moschata OX=3662 GN=LOC1114424...	[more]
A0A6J1J4V9	1.4e-66	85.12	uncharacterized protein LOC111481768 OS=Cucurbita maxima OX=3661 GN=LOC111481768...	[more]

BLAST of CSPI03G35400 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011652026.1	8.3e-82	99.40	uncharacterized protein LOC105434978 [Cucumis sativus] >KGN59184.1 hypothetical ...	[more]
XP_008442897.1	1.9e-78	95.83	PREDICTED: uncharacterized protein LOC103486660 [Cucumis melo] >KAA0043832.1 put...	[more]
XP_038904448.1	4.7e-69	86.90	uncharacterized protein LOC120090813 [Benincasa hispida]	[more]
XP_023526406.1	5.8e-67	85.12	uncharacterized protein LOC111789917 [Cucurbita pepo subsp. pepo]	[more]
XP_022935679.1	7.5e-67	84.52	uncharacterized protein LOC111442465 [Cucurbita moschata]	[more]

BLAST of CSPI03G35400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06280.1	6.7e-13	38.04	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G06280.3	6.7e-13	38.04	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G52520.1	2.8e-11	46.90	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34569	EXPRESSED PROTEIN	coord: 9..159
None	No IPR available	PANTHER	PTHR34569:SF2	EXPRESSED PROTEIN	coord: 9..159

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G35400.1	CSPI03G35400.1	mRNA