CSPI03G34280 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G34280
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	dehydration-responsive element-binding protein 1F-like
Location	Chr3: 29992008 .. 29992622 (-)
RNA-Seq Expression	CSPI03G34280
Synteny	CSPI03G34280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTCTTCGTCTTCAAGCTCAACCAACGACCACCTTCCGCCGCCCACCACAGTGGCGAAGCGAAAGGCCGGTCGGAAAAAATTTCAAGAGACCCGCCACCCGATTTATAAAGGCGTTCGCCAAAGGAATGGTAAATGGGTTTGCGAGCTTCGACGACCTAACAAAAAATCTAGCTTTTGGGTTGGGACTTTTTGTAGCCCAAAAAGGGCGGCTATTGCGTACGACGTAGTTGCCTTGGCTATTAAAGGTGAGTCTGTACCACTCAATTTTCCCAACTTCGCTCACTCATTTCCACGAGTTATGTCCTCATCTTCTTCCATAAGCGATATTCGAGCCATGGCGATTAAGACGGCAGAGACATTTACGTCAGGCGATATATTGACGCCTTTGTCTCTATCGTCGCCCTCGTCGTTATCGTTGTGTTCTTTAATGTCAGAGGAGAAGGTAGTAGGACCAAATTACTTTTGGGACGAGGAGGAGGTGTTTAACATGCCGGCGATTATTGCGGGTATGGCGGAGGGTTTGATTATAACACCACCGGGAATGAAGAAGGAATTCGATTGGGAGGATTCCGAGAACACGATCGAATTGTCGTTATGGAGTCATGAGTGA

mRNA sequence

ATGTCTTCTTCGTCTTCAAGCTCAACCAACGACCACCTTCCGCCGCCCACCACAGTGGCGAAGCGAAAGGCCGGTCGGAAAAAATTTCAAGAGACCCGCCACCCGATTTATAAAGGCGTTCGCCAAAGGAATGGTAAATGGGTTTGCGAGCTTCGACGACCTAACAAAAAATCTAGCTTTTGGGTTGGGACTTTTTGTAGCCCAAAAAGGGCGGCTATTGCGTACGACGTAGTTGCCTTGGCTATTAAAGGTGAGTCTGTACCACTCAATTTTCCCAACTTCGCTCACTCATTTCCACGAGTTATGTCCTCATCTTCTTCCATAAGCGATATTCGAGCCATGGCGATTAAGACGGCAGAGACATTTACGTCAGGCGATATATTGACGCCTTTGTCTCTATCGTCGCCCTCGTCGTTATCGTTGTGTTCTTTAATGTCAGAGGAGAAGGTAGTAGGACCAAATTACTTTTGGGACGAGGAGGAGGTGTTTAACATGCCGGCGATTATTGCGGGTATGGCGGAGGGTTTGATTATAACACCACCGGGAATGAAGAAGGAATTCGATTGGGAGGATTCCGAGAACACGATCGAATTGTCGTTATGGAGTCATGAGTGA

Coding sequence (CDS)

ATGTCTTCTTCGTCTTCAAGCTCAACCAACGACCACCTTCCGCCGCCCACCACAGTGGCGAAGCGAAAGGCCGGTCGGAAAAAATTTCAAGAGACCCGCCACCCGATTTATAAAGGCGTTCGCCAAAGGAATGGTAAATGGGTTTGCGAGCTTCGACGACCTAACAAAAAATCTAGCTTTTGGGTTGGGACTTTTTGTAGCCCAAAAAGGGCGGCTATTGCGTACGACGTAGTTGCCTTGGCTATTAAAGGTGAGTCTGTACCACTCAATTTTCCCAACTTCGCTCACTCATTTCCACGAGTTATGTCCTCATCTTCTTCCATAAGCGATATTCGAGCCATGGCGATTAAGACGGCAGAGACATTTACGTCAGGCGATATATTGACGCCTTTGTCTCTATCGTCGCCCTCGTCGTTATCGTTGTGTTCTTTAATGTCAGAGGAGAAGGTAGTAGGACCAAATTACTTTTGGGACGAGGAGGAGGTGTTTAACATGCCGGCGATTATTGCGGGTATGGCGGAGGGTTTGATTATAACACCACCGGGAATGAAGAAGGAATTCGATTGGGAGGATTCCGAGAACACGATCGAATTGTCGTTATGGAGTCATGAGTGA

Protein sequence

MSSSSSSSTNDHLPPPTTVAKRKAGRKKFQETRHPIYKGVRQRNGKWVCELRRPNKKSSFWVGTFCSPKRAAIAYDVVALAIKGESVPLNFPNFAHSFPRVMSSSSSISDIRAMAIKTAETFTSGDILTPLSLSSPSSLSLCSLMSEEKVVGPNYFWDEEEVFNMPAIIAGMAEGLIITPPGMKKEFDWEDSENTIELSLWSHE*

Homology

[Close]

BLAST of CSPI03G34280 vs. ExPASy Swiss-Prot
Match: P93835 (Dehydration-responsive element-binding protein 1B OS=Arabidopsis thaliana OX=3702 GN=DREB1B PE=1 SV=2)

HSP 1 Score: 130.2 bits (326), Expect = 2.7e-29
Identity = 78/191 (40.84%), Postives = 117/191 (61.26%), Query Frame = 0


Query: 17  TTVAKRKAGRKKFQETRHPIYKGVRQRN-GKWVCELRRPNKKSSFWVGTFCSPKRAAIAY 76
           T+  K+ AGRKKF+ETRHPIY+GVRQRN GKWV E+R PNKK+  W+GTF + + AA A+
Sbjct: 28  TSCPKKPAGRKKFRETRHPIYRGVRQRNSGKWVSEVREPNKKTRIWLGTFQTAEMAARAH 87

Query: 77  DVVALAIKGESVPLNFPNFAHSFPRVMSSSSSISDIRAMAIKTAETF---TSGDILTPLS 136
           DV ALA++G S  LNF + A      +  S+   DI+  A + A  F   T     T   
Sbjct: 88  DVAALALRGRSACLNFADSAWRLR--IPESTCAKDIQKAAAEAALAFQDETCDTTTTNHG 147

Query: 137 LSSPSSLSLCSLMSEEKVVGPNYFWDEEEVFNMPAIIAGMAEGLIITPPGMKKEFDWEDS 196
           L    ++ + ++ + E+  G  ++ DEE +F MP ++  MAEG+++ PP ++   ++ D 
Sbjct: 148 LDMEETM-VEAIYTPEQSEGA-FYMDEETMFGMPTLLDNMAEGMLLPPPSVQWNHNY-DG 207

Query: 197 ENTIELSLWSH 204
           E   ++SLWS+
Sbjct: 208 EGDGDVSLWSY 213

[Close]

BLAST of CSPI03G34280 vs. ExPASy Swiss-Prot
Match: Q9M0L0 (Dehydration-responsive element-binding protein 1A OS=Arabidopsis thaliana OX=3702 GN=DREB1A PE=1 SV=2)

HSP 1 Score: 128.3 bits (321), Expect = 1.0e-28
Identity = 79/204 (38.73%), Postives = 120/204 (58.82%), Query Frame = 0


Query: 4   SSSSSTNDHLPP-PTTVAKRKAGRKKFQETRHPIYKGVRQRN-GKWVCELRRPNKKSSFW 63
           SS SS  D++P   ++  K+ AGRKKF+ETRHPIY+GVR+RN GKWVCE+R PNKK+  W
Sbjct: 17  SSVSSGGDYIPTLASSCPKKPAGRKKFRETRHPIYRGVRRRNSGKWVCEVREPNKKTRIW 76

Query: 64  VGTFCSPKRAAIAYDVVALAIKGESVPLNFPNFAHSFPRVMSSSSSISDIRAMAIKTAET 123
           +GTF + + AA A+DV ALA++G S  LNF + A      +  S+   DI+  A + A  
Sbjct: 77  LGTFQTAEMAARAHDVAALALRGRSACLNFADSAWRLR--IPESTCAKDIQKAAAEAALA 136

Query: 124 FTSG--DILTPLSLSSPSSLSLCSLMSEEKVVGPNYFWDEEEVFNMPAIIAGMAEGLIIT 183
           F     D  T        +L      +E+      ++  +E +F MP+++A MAEG+++ 
Sbjct: 137 FQDEMCDATTDHGFDMEETLVEAIYTAEQSENA--FYMHDEAMFEMPSLLANMAEGMLLP 196

Query: 184 PPGMKKEFDWEDSENTIELSLWSH 204
            P ++   + E   +  ++SLWS+
Sbjct: 197 LPSVQWNHNHEVDGDDDDVSLWSY 216

[Close]

BLAST of CSPI03G34280 vs. ExPASy Swiss-Prot
Match: Q9FJ93 (Dehydration-responsive element-binding protein 1D OS=Arabidopsis thaliana OX=3702 GN=DREB1D PE=2 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 4.3e-27
Identity = 78/194 (40.21%), Postives = 111/194 (57.22%), Query Frame = 0


Query: 21  KRKAGRKKFQETRHPIYKGVRQRN-GKWVCELRRPNKKSSFWVGTFCSPKRAAIAYDVVA 80
           K++AGRKKF+ETRHPIY+GVRQRN GKWVCE+R PNKKS  W+GTF + + AA A+DV A
Sbjct: 38  KKRAGRKKFRETRHPIYRGVRQRNSGKWVCEVREPNKKSRIWLGTFPTVEMAARAHDVAA 97

Query: 81  LAIKGESVPLNFPNFA-------HSFPRVMSSSSSISDIRAMAIKTAETFTSGDILTPLS 140
           LA++G S  LNF + A        + P+ +  ++S +   AMA +  ET T G      +
Sbjct: 98  LALRGRSACLNFADSAWRLRIPETTCPKEIQKAASEA---AMAFQN-ETTTEGSKTAAEA 157

Query: 141 LSSPSSLSLCSLMSEEKVVGPNYFWDEEEVFNMPAIIAGMAEGLIITPPGMKKEFDW--E 200
             +            E+  G  ++ D+E +  MP     MAEG+++ PP    E  W   
Sbjct: 158 EEAAGEGVREGERRAEEQNGGVFYMDDEALLGMPNFFENMAEGMLLPPP----EVGWNHN 217

Query: 201 DSENTIELSLWSHE 205
           D +   ++SLWS +
Sbjct: 218 DFDGVGDVSLWSFD 223

[Close]

BLAST of CSPI03G34280 vs. ExPASy Swiss-Prot
Match: A2WZI4 (Dehydration-responsive element-binding protein 1F OS=Oryza sativa subsp. indica OX=39946 GN=DREB1F PE=2 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 4.3e-27
Identity = 78/208 (37.50%), Postives = 116/208 (55.77%), Query Frame = 0


Query: 4   SSSSSTNDHLPPPTTVAKRKAGRKKFQETRHPIYKGVRQRNG--KWVCELRRPNKKSSFW 63
           SS    + H  PP    KR+AGRKKF+ETRHP+Y+GVR R G  +WVCE+R P  ++  W
Sbjct: 18  SSPGGGHHHRLPP----KRRAGRKKFRETRHPVYRGVRARAGGSRWVCEVREPQAQARIW 77

Query: 64  VGTFCSPKRAAIAYDVVALAIKGE-SVPLNFPNFAHSFPRVMSSSSSISDIRAMAIKTAE 123
           +GT+ +P+ AA A+DV A+A++GE    LNFP+   + PR  ++S    DIR  A + AE
Sbjct: 78  LGTYPTPEMAARAHDVAAIALRGERGAELNFPDSPSTLPRARTASP--EDIRLAAAQAAE 137

Query: 124 TFTSGDILTPLSL-SSPSSLSLCSLMSEEKVVGPNYFWDEEEVFNMPAIIAGMAEGLIIT 183
            +       PL+L   P   +     +         F DE+ +F+MP +I  MA G+++T
Sbjct: 138 LYRRPP--PPLALPEDPQEGTSGGGATATSGRPAAVFVDEDAIFDMPGLIDDMARGMMLT 197

Query: 184 PPGMKKEF-DW-----EDSENTIELSLW 202
           PP + +   DW     +D    ++  LW
Sbjct: 198 PPAIGRSLDDWAAIDDDDDHYHMDYKLW 217

[Close]

BLAST of CSPI03G34280 vs. ExPASy Swiss-Prot
Match: Q8S9Z5 (Dehydration-responsive element-binding protein 1F OS=Oryza sativa subsp. japonica OX=39947 GN=DREB1F PE=3 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 4.3e-27
Identity = 78/208 (37.50%), Postives = 116/208 (55.77%), Query Frame = 0


Query: 4   SSSSSTNDHLPPPTTVAKRKAGRKKFQETRHPIYKGVRQRNG--KWVCELRRPNKKSSFW 63
           SS    + H  PP    KR+AGRKKF+ETRHP+Y+GVR R G  +WVCE+R P  ++  W
Sbjct: 18  SSPGGGHHHRLPP----KRRAGRKKFRETRHPVYRGVRARAGGSRWVCEVREPQAQARIW 77

Query: 64  VGTFCSPKRAAIAYDVVALAIKGE-SVPLNFPNFAHSFPRVMSSSSSISDIRAMAIKTAE 123
           +GT+ +P+ AA A+DV A+A++GE    LNFP+   + PR  ++S    DIR  A + AE
Sbjct: 78  LGTYPTPEMAARAHDVAAIALRGERGAELNFPDSPSTLPRARTASP--EDIRLAAAQAAE 137

Query: 124 TFTSGDILTPLSL-SSPSSLSLCSLMSEEKVVGPNYFWDEEEVFNMPAIIAGMAEGLIIT 183
            +       PL+L   P   +     +         F DE+ +F+MP +I  MA G+++T
Sbjct: 138 LYRRPP--PPLALPEDPQEGTSGGGATATSGRPAAVFVDEDAIFDMPGLIDDMARGMMLT 197

Query: 184 PPGMKKEF-DW-----EDSENTIELSLW 202
           PP + +   DW     +D    ++  LW
Sbjct: 198 PPAIGRSLDDWAAIDDDDDHYHMDYKLW 217

[Close]

BLAST of CSPI03G34280 vs. ExPASy TrEMBL
Match: I3WEU3 (CBF3 protein OS=Cucumis sativus OX=3659 GN=CBF3 PE=2 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 1.5e-110
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MSSSSSSSTNDHLPPPTTVAKRKAGRKKFQETRHPIYKGVRQRNGKWVCELRRPNKKSSF 60
           MSSSSSSSTNDHLPPPTTVAKRKAGRKKFQETRHPIYKGVRQRNGKWVCELRRPNKKSSF
Sbjct: 1   MSSSSSSSTNDHLPPPTTVAKRKAGRKKFQETRHPIYKGVRQRNGKWVCELRRPNKKSSF 60

Query: 61  WVGTFCSPKRAAIAYDVVALAIKGESVPLNFPNFAHSFPRVMSSSSSISDIRAMAIKTAE 120
           WVGTFCSPKRAAIAYDVVALAIKGESVPLNFPNFAHSFPRVMSSSSSISDIRAMAIKTAE
Sbjct: 61  WVGTFCSPKRAAIAYDVVALAIKGESVPLNFPNFAHSFPRVMSSSSSISDIRAMAIKTAE 120

Query: 121 TFTSGDILTPLSLSSPSSLSLCSLMSEEKVVGPNYFWDEEEVFNMPAIIAGMAEGLIITP 180
           TFTSGDILTPLSLSSPSSLSLCSLMSEEKVVGPNYFWDEEEVFNMPAIIAGMAEGLIITP
Sbjct: 121 TFTSGDILTPLSLSSPSSLSLCSLMSEEKVVGPNYFWDEEEVFNMPAIIAGMAEGLIITP 180

Query: 181 PGMKKEFDWEDSENTIELSLWSHE 205
           PGMKKEFDWEDSENTIELSLWSHE
Sbjct: 181 PGMKKEFDWEDSENTIELSLWSHE 204

[Close]

BLAST of CSPI03G34280 vs. ExPASy TrEMBL
Match: A0A140DCV7 (CRT/DRE-binding factor 3 OS=Cucumis melo OX=3656 PE=2 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 1.5e-110
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MSSSSSSSTNDHLPPPTTVAKRKAGRKKFQETRHPIYKGVRQRNGKWVCELRRPNKKSSF 60
           MSSSSSSSTNDHLPPPTTVAKRKAGRKKFQETRHPIYKGVRQRNGKWVCELRRPNKKSSF
Sbjct: 1   MSSSSSSSTNDHLPPPTTVAKRKAGRKKFQETRHPIYKGVRQRNGKWVCELRRPNKKSSF 60

Query: 61  WVGTFCSPKRAAIAYDVVALAIKGESVPLNFPNFAHSFPRVMSSSSSISDIRAMAIKTAE 120
           WVGTFCSPKRAAIAYDVVALAIKGESVPLNFPNFAHSFPRVMSSSSSISDIRAMAIKTAE
Sbjct: 61  WVGTFCSPKRAAIAYDVVALAIKGESVPLNFPNFAHSFPRVMSSSSSISDIRAMAIKTAE 120

Query: 121 TFTSGDILTPLSLSSPSSLSLCSLMSEEKVVGPNYFWDEEEVFNMPAIIAGMAEGLIITP 180
           TFTSGDILTPLSLSSPSSLSLCSLMSEEKVVGPNYFWDEEEVFNMPAIIAGMAEGLIITP
Sbjct: 121 TFTSGDILTPLSLSSPSSLSLCSLMSEEKVVGPNYFWDEEEVFNMPAIIAGMAEGLIITP 180

Query: 181 PGMKKEFDWEDSENTIELSLWSHE 205
           PGMKKEFDWEDSENTIELSLWSHE
Sbjct: 181 PGMKKEFDWEDSENTIELSLWSHE 204

[Close]

BLAST of CSPI03G34280 vs. ExPASy TrEMBL
Match: A0A5D3DNN2 (Dehydration-responsive element-binding protein 1F-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G003570 PE=4 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 2.8e-98
Identity = 189/205 (92.20%), Postives = 195/205 (95.12%), Query Frame = 0


Query: 1   MSSSSSSSTNDHLPPPTTVAKRKAGRKKFQETRHPIYKGVRQRNGKWVCELRRPNKKSSF 60
           M SSSSSSTNDHLPPPTTVAKRKAGRKKFQETRHPIYKGVRQRNGKWVCELR+PNKKSSF
Sbjct: 1   MPSSSSSSTNDHLPPPTTVAKRKAGRKKFQETRHPIYKGVRQRNGKWVCELRQPNKKSSF 60

Query: 61  WVGTFCSPKRAAIAYDVVALAIKGESVPLNFPNFAHSFPRVMSSSSSISDIRAMAIKTAE 120
           WVGTFCSPK AAIAYDVVALAIKGESV LNFPNFAHSFPRVMSSSSSI+DIRAMAIKTAE
Sbjct: 61  WVGTFCSPKTAAIAYDVVALAIKGESVSLNFPNFAHSFPRVMSSSSSINDIRAMAIKTAE 120

Query: 121 TFTSGDILTPLSLSSPSS-LSLCSLMSEEKVVGPNYFWDEEEVFNMPAIIAGMAEGLIIT 180
           TFTS DI+ P  LSSPSS  SLCSLMSEEKVV PNYFWDEEEVFNMPAIIAG+AEGLIIT
Sbjct: 121 TFTSSDIMMP--LSSPSSPSSLCSLMSEEKVV-PNYFWDEEEVFNMPAIIAGIAEGLIIT 180

Query: 181 PPGMKKEFDWEDSENTIELSLWSHE 205
           PPGMK+EFDWEDSENT+ELSLWSHE
Sbjct: 181 PPGMKREFDWEDSENTMELSLWSHE 202

[Close]

BLAST of CSPI03G34280 vs. ExPASy TrEMBL
Match: A0A1S3B6L0 (dehydration-responsive element-binding protein 1F-like OS=Cucumis melo OX=3656 GN=LOC103486580 PE=4 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 2.8e-98
Identity = 189/205 (92.20%), Postives = 195/205 (95.12%), Query Frame = 0


Query: 1   MSSSSSSSTNDHLPPPTTVAKRKAGRKKFQETRHPIYKGVRQRNGKWVCELRRPNKKSSF 60
           M SSSSSSTNDHLPPPTTVAKRKAGRKKFQETRHPIYKGVRQRNGKWVCELR+PNKKSSF
Sbjct: 1   MPSSSSSSTNDHLPPPTTVAKRKAGRKKFQETRHPIYKGVRQRNGKWVCELRQPNKKSSF 60

Query: 61  WVGTFCSPKRAAIAYDVVALAIKGESVPLNFPNFAHSFPRVMSSSSSISDIRAMAIKTAE 120
           WVGTFCSPK AAIAYDVVALAIKGESV LNFPNFAHSFPRVMSSSSSI+DIRAMAIKTAE
Sbjct: 61  WVGTFCSPKTAAIAYDVVALAIKGESVSLNFPNFAHSFPRVMSSSSSINDIRAMAIKTAE 120

Query: 121 TFTSGDILTPLSLSSPSS-LSLCSLMSEEKVVGPNYFWDEEEVFNMPAIIAGMAEGLIIT 180
           TFTS DI+ P  LSSPSS  SLCSLMSEEKVV PNYFWDEEEVFNMPAIIAG+AEGLIIT
Sbjct: 121 TFTSSDIMMP--LSSPSSPSSLCSLMSEEKVV-PNYFWDEEEVFNMPAIIAGIAEGLIIT 180

Query: 181 PPGMKKEFDWEDSENTIELSLWSHE 205
           PPGMK+EFDWEDSENT+ELSLWSHE
Sbjct: 181 PPGMKREFDWEDSENTMELSLWSHE 202

[Close]

BLAST of CSPI03G34280 vs. ExPASy TrEMBL
Match: A0A6J1J762 (dehydration-responsive element-binding protein 1B-like OS=Cucurbita maxima OX=3661 GN=LOC111481980 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 1.3e-71
Identity = 149/210 (70.95%), Postives = 167/210 (79.52%), Query Frame = 0


Query: 1   MSSSSSSSTNDHLPP--PTTVAKRKAGRKKFQETRHPIYKGVRQRNGKWVCELRRPNKKS 60
           M SSSSSSTN+HLPP   T   KRKAGRKKFQETRHPIYKGVRQRNGKWV ELR PNK S
Sbjct: 1   MPSSSSSSTNEHLPPSQKTASTKRKAGRKKFQETRHPIYKGVRQRNGKWVSELRWPNKNS 60

Query: 61  SFWVGTFCSPKRAAIAYDVVALAIKGESVPLNFPNFAHSFPRVMSSSSSISDIRAMAIKT 120
           +FWVGTFCSP+ AA+AYDVVAL IKGES PLNFPN+ H FPRV SSSSSI+DIR MA++ 
Sbjct: 61  TFWVGTFCSPEMAAVAYDVVALTIKGESAPLNFPNWTHLFPRVTSSSSSINDIRTMAMEA 120

Query: 121 AETFTSGDILTPLSLSSPSSLSLCSLMSEEK----VVGPNYFWDEEEVFNMPAIIAGMAE 180
           AE FTS + L+ LS    SSL   SLMSEEK    V+      DEEEVFNMP IIAGMAE
Sbjct: 121 AEAFTSSNRLSSLS----SSLLCSSLMSEEKMIPEVLTERLVLDEEEVFNMPVIIAGMAE 180

Query: 181 GLIITPPGMKKEFDWEDSENTIELSLWSHE 205
           GLI+TPPGMK+ F+WE+ E+T+ELSLWS +
Sbjct: 181 GLILTPPGMKRGFNWEEYEDTVELSLWSDD 206

[Close]

BLAST of CSPI03G34280 vs. NCBI nr
Match: NP_001267604.1 (dehydration-responsive element-binding protein 1A-like [Cucumis sativus] >AFL03400.1 CBF3 protein [Cucumis sativus] >AMK37722.1 CRT/DRE-binding factor 3 [Cucumis melo])

HSP 1 Score: 408.7 bits (1049), Expect = 3.0e-110
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MSSSSSSSTNDHLPPPTTVAKRKAGRKKFQETRHPIYKGVRQRNGKWVCELRRPNKKSSF 60
           MSSSSSSSTNDHLPPPTTVAKRKAGRKKFQETRHPIYKGVRQRNGKWVCELRRPNKKSSF
Sbjct: 1   MSSSSSSSTNDHLPPPTTVAKRKAGRKKFQETRHPIYKGVRQRNGKWVCELRRPNKKSSF 60

Query: 61  WVGTFCSPKRAAIAYDVVALAIKGESVPLNFPNFAHSFPRVMSSSSSISDIRAMAIKTAE 120
           WVGTFCSPKRAAIAYDVVALAIKGESVPLNFPNFAHSFPRVMSSSSSISDIRAMAIKTAE
Sbjct: 61  WVGTFCSPKRAAIAYDVVALAIKGESVPLNFPNFAHSFPRVMSSSSSISDIRAMAIKTAE 120

Query: 121 TFTSGDILTPLSLSSPSSLSLCSLMSEEKVVGPNYFWDEEEVFNMPAIIAGMAEGLIITP 180
           TFTSGDILTPLSLSSPSSLSLCSLMSEEKVVGPNYFWDEEEVFNMPAIIAGMAEGLIITP
Sbjct: 121 TFTSGDILTPLSLSSPSSLSLCSLMSEEKVVGPNYFWDEEEVFNMPAIIAGMAEGLIITP 180

Query: 181 PGMKKEFDWEDSENTIELSLWSHE 205
           PGMKKEFDWEDSENTIELSLWSHE
Sbjct: 181 PGMKKEFDWEDSENTIELSLWSHE 204

[Close]

BLAST of CSPI03G34280 vs. NCBI nr
Match: KAE8651078.1 (hypothetical protein Csa_001557 [Cucumis sativus])

HSP 1 Score: 408.7 bits (1049), Expect = 3.0e-110
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MSSSSSSSTNDHLPPPTTVAKRKAGRKKFQETRHPIYKGVRQRNGKWVCELRRPNKKSSF 60
           MSSSSSSSTNDHLPPPTTVAKRKAGRKKFQETRHPIYKGVRQRNGKWVCELRRPNKKSSF
Sbjct: 21  MSSSSSSSTNDHLPPPTTVAKRKAGRKKFQETRHPIYKGVRQRNGKWVCELRRPNKKSSF 80

Query: 61  WVGTFCSPKRAAIAYDVVALAIKGESVPLNFPNFAHSFPRVMSSSSSISDIRAMAIKTAE 120
           WVGTFCSPKRAAIAYDVVALAIKGESVPLNFPNFAHSFPRVMSSSSSISDIRAMAIKTAE
Sbjct: 81  WVGTFCSPKRAAIAYDVVALAIKGESVPLNFPNFAHSFPRVMSSSSSISDIRAMAIKTAE 140

Query: 121 TFTSGDILTPLSLSSPSSLSLCSLMSEEKVVGPNYFWDEEEVFNMPAIIAGMAEGLIITP 180
           TFTSGDILTPLSLSSPSSLSLCSLMSEEKVVGPNYFWDEEEVFNMPAIIAGMAEGLIITP
Sbjct: 141 TFTSGDILTPLSLSSPSSLSLCSLMSEEKVVGPNYFWDEEEVFNMPAIIAGMAEGLIITP 200

Query: 181 PGMKKEFDWEDSENTIELSLWSHE 205
           PGMKKEFDWEDSENTIELSLWSHE
Sbjct: 201 PGMKKEFDWEDSENTIELSLWSHE 224

[Close]

BLAST of CSPI03G34280 vs. NCBI nr
Match: XP_008442807.1 (PREDICTED: dehydration-responsive element-binding protein 1F-like [Cucumis melo] >KAA0043910.1 dehydration-responsive element-binding protein 1F-like [Cucumis melo var. makuwa] >TYK25227.1 dehydration-responsive element-binding protein 1F-like [Cucumis melo var. makuwa])

HSP 1 Score: 367.9 bits (943), Expect = 5.9e-98
Identity = 189/205 (92.20%), Postives = 195/205 (95.12%), Query Frame = 0


Query: 1   MSSSSSSSTNDHLPPPTTVAKRKAGRKKFQETRHPIYKGVRQRNGKWVCELRRPNKKSSF 60
           M SSSSSSTNDHLPPPTTVAKRKAGRKKFQETRHPIYKGVRQRNGKWVCELR+PNKKSSF
Sbjct: 1   MPSSSSSSTNDHLPPPTTVAKRKAGRKKFQETRHPIYKGVRQRNGKWVCELRQPNKKSSF 60

Query: 61  WVGTFCSPKRAAIAYDVVALAIKGESVPLNFPNFAHSFPRVMSSSSSISDIRAMAIKTAE 120
           WVGTFCSPK AAIAYDVVALAIKGESV LNFPNFAHSFPRVMSSSSSI+DIRAMAIKTAE
Sbjct: 61  WVGTFCSPKTAAIAYDVVALAIKGESVSLNFPNFAHSFPRVMSSSSSINDIRAMAIKTAE 120

Query: 121 TFTSGDILTPLSLSSPSS-LSLCSLMSEEKVVGPNYFWDEEEVFNMPAIIAGMAEGLIIT 180
           TFTS DI+ P  LSSPSS  SLCSLMSEEKVV PNYFWDEEEVFNMPAIIAG+AEGLIIT
Sbjct: 121 TFTSSDIMMP--LSSPSSPSSLCSLMSEEKVV-PNYFWDEEEVFNMPAIIAGIAEGLIIT 180

Query: 181 PPGMKKEFDWEDSENTIELSLWSHE 205
           PPGMK+EFDWEDSENT+ELSLWSHE
Sbjct: 181 PPGMKREFDWEDSENTMELSLWSHE 202

[Close]

BLAST of CSPI03G34280 vs. NCBI nr
Match: XP_038906080.1 (dehydration-responsive element-binding protein 1B-like [Benincasa hispida])

HSP 1 Score: 310.8 bits (795), Expect = 8.5e-81
Identity = 164/206 (79.61%), Postives = 180/206 (87.38%), Query Frame = 0


Query: 1   MSSSSSSSTNDHLPPPTTVAKRKAGRKKFQETRHPIYKGVRQRNGKWVCELRRPNKKSSF 60
           MSSSSSSSTNDHL PP  V KR+AGR+KFQETRHPI+KGVRQRNGKWV ELRRPNKKSS 
Sbjct: 1   MSSSSSSSTNDHLSPP-AVVKRRAGRQKFQETRHPIFKGVRQRNGKWVSELRRPNKKSSL 60

Query: 61  WVGTFCSPKRAAIAYDVVALAIKGESVPLNFPNFAHSFPRVMSSSSSISDIRAMAIKTAE 120
           WVGTFC+PK AA+AYDVVALAIKGES  LNFPN A+SFPRVM SSS+I DIR MAI+TA+
Sbjct: 61  WVGTFCNPKTAAVAYDVVALAIKGESASLNFPNLAYSFPRVM-SSSTIHDIRTMAIETAK 120

Query: 121 TFTSGDILTPLS-LSSPSSLS-LCSLMSEEKVVGPNYFWDEEEVFNMPAIIAGMAEGLII 180
            FTS DILT LS LS PSS S LCSL ++EKVV PN+FWDE+EVFNMPAIIAGMAEGLI+
Sbjct: 121 AFTSSDILTSLSPLSPPSSQSLLCSLTADEKVV-PNFFWDEDEVFNMPAIIAGMAEGLIL 180

Query: 181 TPPGMKKEFDWEDSENTIELSLWSHE 205
           TPP +K EFDWED EN IEL+LWSHE
Sbjct: 181 TPPKIKSEFDWEDCENIIELTLWSHE 203

[Close]

BLAST of CSPI03G34280 vs. NCBI nr
Match: KAG6580677.1 (Dehydration-responsive element-binding protein 1B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 279.6 bits (714), Expect = 2.1e-71
Identity = 149/211 (70.62%), Postives = 169/211 (80.09%), Query Frame = 0


Query: 1   MSSSSSSSTNDHLPP--PTTVAKRKAGRKKFQETRHPIYKGVRQRNGKWVCELRRPNKKS 60
           M SSSSSSTN+HLPP   T   KRKAGRKKFQETRHPIYKGVRQRNGKWV ELR PNK S
Sbjct: 1   MPSSSSSSTNEHLPPSQKTASTKRKAGRKKFQETRHPIYKGVRQRNGKWVSELRWPNKNS 60

Query: 61  SFWVGTFCSPKRAAIAYDVVALAIKGESVPLNFPNFAHSFPRVMSSSSSISDIRAMAIKT 120
           +FWVGTFC+P+ AA+AYDVVAL IKGES PLNFPN+ H FPRV SSSSSI+DIR MA++ 
Sbjct: 61  TFWVGTFCTPEMAAVAYDVVALTIKGESAPLNFPNWTHLFPRVTSSSSSINDIRTMAVEA 120

Query: 121 AETFTSGDILTPLSLSSPSSLSLC-SLMSEE----KVVGPNYFWDEEEVFNMPAIIAGMA 180
           AE FTS +      LSS SS SLC SLMSEE    +V+      DEEEVFNMPAIIA MA
Sbjct: 121 AEAFTSSN-----RLSSLSSSSLCSSLMSEEMVIPEVLTDRLVLDEEEVFNMPAIIASMA 180

Query: 181 EGLIITPPGMKKEFDWEDSENTIELSLWSHE 205
           EGLI+TPPGMK+ F+WE+ E+T+ELSLW+H+
Sbjct: 181 EGLILTPPGMKRGFNWEEYEDTVELSLWNHD 206

[Close]

BLAST of CSPI03G34280 vs. TAIR 10
Match: AT4G25490.1 (C-repeat/DRE binding factor 1 )

HSP 1 Score: 130.2 bits (326), Expect = 1.9e-30
Identity = 78/191 (40.84%), Postives = 117/191 (61.26%), Query Frame = 0


Query: 17  TTVAKRKAGRKKFQETRHPIYKGVRQRN-GKWVCELRRPNKKSSFWVGTFCSPKRAAIAY 76
           T+  K+ AGRKKF+ETRHPIY+GVRQRN GKWV E+R PNKK+  W+GTF + + AA A+
Sbjct: 28  TSCPKKPAGRKKFRETRHPIYRGVRQRNSGKWVSEVREPNKKTRIWLGTFQTAEMAARAH 87

Query: 77  DVVALAIKGESVPLNFPNFAHSFPRVMSSSSSISDIRAMAIKTAETF---TSGDILTPLS 136
           DV ALA++G S  LNF + A      +  S+   DI+  A + A  F   T     T   
Sbjct: 88  DVAALALRGRSACLNFADSAWRLR--IPESTCAKDIQKAAAEAALAFQDETCDTTTTNHG 147

Query: 137 LSSPSSLSLCSLMSEEKVVGPNYFWDEEEVFNMPAIIAGMAEGLIITPPGMKKEFDWEDS 196
           L    ++ + ++ + E+  G  ++ DEE +F MP ++  MAEG+++ PP ++   ++ D 
Sbjct: 148 LDMEETM-VEAIYTPEQSEGA-FYMDEETMFGMPTLLDNMAEGMLLPPPSVQWNHNY-DG 207

Query: 197 ENTIELSLWSH 204
           E   ++SLWS+
Sbjct: 208 EGDGDVSLWSY 213

[Close]

BLAST of CSPI03G34280 vs. TAIR 10
Match: AT4G25480.1 (dehydration response element B1A )

HSP 1 Score: 128.3 bits (321), Expect = 7.3e-30
Identity = 79/204 (38.73%), Postives = 120/204 (58.82%), Query Frame = 0


Query: 4   SSSSSTNDHLPP-PTTVAKRKAGRKKFQETRHPIYKGVRQRN-GKWVCELRRPNKKSSFW 63
           SS SS  D++P   ++  K+ AGRKKF+ETRHPIY+GVR+RN GKWVCE+R PNKK+  W
Sbjct: 17  SSVSSGGDYIPTLASSCPKKPAGRKKFRETRHPIYRGVRRRNSGKWVCEVREPNKKTRIW 76

Query: 64  VGTFCSPKRAAIAYDVVALAIKGESVPLNFPNFAHSFPRVMSSSSSISDIRAMAIKTAET 123
           +GTF + + AA A+DV ALA++G S  LNF + A      +  S+   DI+  A + A  
Sbjct: 77  LGTFQTAEMAARAHDVAALALRGRSACLNFADSAWRLR--IPESTCAKDIQKAAAEAALA 136

Query: 124 FTSG--DILTPLSLSSPSSLSLCSLMSEEKVVGPNYFWDEEEVFNMPAIIAGMAEGLIIT 183
           F     D  T        +L      +E+      ++  +E +F MP+++A MAEG+++ 
Sbjct: 137 FQDEMCDATTDHGFDMEETLVEAIYTAEQSENA--FYMHDEAMFEMPSLLANMAEGMLLP 196

Query: 184 PPGMKKEFDWEDSENTIELSLWSH 204
            P ++   + E   +  ++SLWS+
Sbjct: 197 LPSVQWNHNHEVDGDDDDVSLWSY 216

[Close]

BLAST of CSPI03G34280 vs. TAIR 10
Match: AT5G51990.1 (C-repeat-binding factor 4 )

HSP 1 Score: 122.9 bits (307), Expect = 3.1e-28
Identity = 78/194 (40.21%), Postives = 111/194 (57.22%), Query Frame = 0


Query: 21  KRKAGRKKFQETRHPIYKGVRQRN-GKWVCELRRPNKKSSFWVGTFCSPKRAAIAYDVVA 80
           K++AGRKKF+ETRHPIY+GVRQRN GKWVCE+R PNKKS  W+GTF + + AA A+DV A
Sbjct: 38  KKRAGRKKFRETRHPIYRGVRQRNSGKWVCEVREPNKKSRIWLGTFPTVEMAARAHDVAA 97

Query: 81  LAIKGESVPLNFPNFA-------HSFPRVMSSSSSISDIRAMAIKTAETFTSGDILTPLS 140
           LA++G S  LNF + A        + P+ +  ++S +   AMA +  ET T G      +
Sbjct: 98  LALRGRSACLNFADSAWRLRIPETTCPKEIQKAASEA---AMAFQN-ETTTEGSKTAAEA 157

Query: 141 LSSPSSLSLCSLMSEEKVVGPNYFWDEEEVFNMPAIIAGMAEGLIITPPGMKKEFDW--E 200
             +            E+  G  ++ D+E +  MP     MAEG+++ PP    E  W   
Sbjct: 158 EEAAGEGVREGERRAEEQNGGVFYMDDEALLGMPNFFENMAEGMLLPPP----EVGWNHN 217

Query: 201 DSENTIELSLWSHE 205
           D +   ++SLWS +
Sbjct: 218 DFDGVGDVSLWSFD 223

[Close]

BLAST of CSPI03G34280 vs. TAIR 10
Match: AT4G25470.1 (C-repeat/DRE binding factor 2 )

HSP 1 Score: 122.5 bits (306), Expect = 4.0e-28
Identity = 77/203 (37.93%), Postives = 118/203 (58.13%), Query Frame = 0


Query: 4   SSSSSTNDHLPP-PTTVAKRKAGRKKFQETRHPIYKGVRQRN-GKWVCELRRPNKKSSFW 63
           S  SS  D+ P   T+  K+ AGRKKF+ETRHPIY+GVRQRN GKWVCELR PNKK+  W
Sbjct: 17  SPVSSGGDYSPKLATSCPKKPAGRKKFRETRHPIYRGVRQRNSGKWVCELREPNKKTRIW 76

Query: 64  VGTFCSPKRAAIAYDVVALAIKGESVPLNFPNFAHSFPRVMSSSSSISDIRAMAIKTAET 123
           +GTF + + AA A+DV A+A++G S  LNF + A      +  S+   +I+  A + A  
Sbjct: 77  LGTFQTAEMAARAHDVAAIALRGRSACLNFADSAWRLR--IPESTCAKEIQKAAAEAALN 136

Query: 124 FTSGDI-LTPLSLSSPSSLSLCSLMSEEKVVGPNYFWDEEEVFNMPAIIAGMAEGLIITP 183
           F      +T  +       +L   +   +     ++ DEE +  M +++  MAEG+++  
Sbjct: 137 FQDEMCHMTTDAHGLDMEETLVEAIYTPEQSQDAFYMDEEAMLGMSSLLDNMAEGMLLPS 196

Query: 184 PGMKKEFDWEDSENTIELSLWSH 204
           P ++  +++ D E   ++SLWS+
Sbjct: 197 PSVQWNYNF-DVEGDDDVSLWSY 216

[Close]

BLAST of CSPI03G34280 vs. TAIR 10
Match: AT2G36450.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 119.4 bits (298), Expect = 3.4e-27
Identity = 65/159 (40.88%), Postives = 93/159 (58.49%), Query Frame = 0


Query: 25  GRKKFQETRHPIYKGVRQR--NGKWVCELRRPNKKSSFWVGTFCSPKRAAIAYDVVALAI 84
           G  K    RHP+Y+GVRQR  + KWV E+R P K +  W+GTF +P+ AAIAYDV ALA+
Sbjct: 3   GTSKDNGGRHPLYRGVRQRKNSNKWVSEIREPRKPNRIWLGTFSTPEMAAIAYDVAALAL 62

Query: 85  KGESVPLNFPNFAHSFPRVMSSSSSISDIRAMAIKTAETFTSGDILTPLSLSSPSSLSLC 144
           KG    LNFPN   S P    +S S +DI+A A   A  F +      ++ ++  +  + 
Sbjct: 63  KGSQAELNFPNSVSSLP--APTSMSPADIQAAAASAAAAFGAARDAIVMANNNSQTSGVA 122

Query: 145 SLMSEEKVVGPNYFWDEEEVFNMPAIIAGMAEGLIITPP 182
            + S       N F DE+ VF+MP ++  MAEG++++PP
Sbjct: 123 CMNSSYDNTNMNGFMDEDLVFDMPNVLMNMAEGMLLSPP 159

The following BLAST results are available for this feature:

BLAST of CSPI03G34280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P93835	2.7e-29	40.84	Dehydration-responsive element-binding protein 1B OS=Arabidopsis thaliana OX=370...	[more]
Q9M0L0	1.0e-28	38.73	Dehydration-responsive element-binding protein 1A OS=Arabidopsis thaliana OX=370...	[more]
Q9FJ93	4.3e-27	40.21	Dehydration-responsive element-binding protein 1D OS=Arabidopsis thaliana OX=370...	[more]
A2WZI4	4.3e-27	37.50	Dehydration-responsive element-binding protein 1F OS=Oryza sativa subsp. indica ...	[more]
Q8S9Z5	4.3e-27	37.50	Dehydration-responsive element-binding protein 1F OS=Oryza sativa subsp. japonic...	[more]

BLAST of CSPI03G34280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
I3WEU3	1.5e-110	100.00	CBF3 protein OS=Cucumis sativus OX=3659 GN=CBF3 PE=2 SV=1	[more]
A0A140DCV7	1.5e-110	100.00	CRT/DRE-binding factor 3 OS=Cucumis melo OX=3656 PE=2 SV=1	[more]
A0A5D3DNN2	2.8e-98	92.20	Dehydration-responsive element-binding protein 1F-like OS=Cucumis melo var. maku...	[more]
A0A1S3B6L0	2.8e-98	92.20	dehydration-responsive element-binding protein 1F-like OS=Cucumis melo OX=3656 G...	[more]
A0A6J1J762	1.3e-71	70.95	dehydration-responsive element-binding protein 1B-like OS=Cucurbita maxima OX=36...	[more]

BLAST of CSPI03G34280 vs. NCBI nr


Match Name	E-value	Identity	Description
NP_001267604.1	3.0e-110	100.00	dehydration-responsive element-binding protein 1A-like [Cucumis sativus] >AFL034...	[more]
KAE8651078.1	3.0e-110	100.00	hypothetical protein Csa_001557 [Cucumis sativus]	[more]
XP_008442807.1	5.9e-98	92.20	PREDICTED: dehydration-responsive element-binding protein 1F-like [Cucumis melo]...	[more]
XP_038906080.1	8.5e-81	79.61	dehydration-responsive element-binding protein 1B-like [Benincasa hispida]	[more]
KAG6580677.1	2.1e-71	70.62	Dehydration-responsive element-binding protein 1B, partial [Cucurbita argyrosper...	[more]

BLAST of CSPI03G34280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25490.1	1.9e-30	40.84	C-repeat/DRE binding factor 1	[more]
AT4G25480.1	7.3e-30	38.73	dehydration response element B1A	[more]
AT5G51990.1	3.1e-28	40.21	C-repeat-binding factor 4	[more]
AT4G25470.1	4.0e-28	37.93	C-repeat/DRE binding factor 2	[more]
AT2G36450.1	3.4e-27	40.88	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 36..98 e-value: 6.3E-15 score: 65.6
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 35..84 e-value: 1.5E-9 score: 37.9
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 36..92 score: 15.698555
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 35..93 e-value: 4.84752E-19 score: 75.3859
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 36..93 e-value: 4.1E-16 score: 60.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	PANTHER	PTHR31839	DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D	coord: 7..202
None	No IPR available	PANTHER	PTHR31839:SF39	DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1B-LIKE	coord: 7..202
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 36..92

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G34280.1	CSPI03G34280.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity