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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGAAGTTTGTAGCGTGGAAATTGAAGACGGTATATATATATATAGATCTATCCACACAAGTTCCAAGATATCTATATTCCATTATATTTATCGCATAAAAAATAATAAAGTAAAGGATTTAGTGAACAGACTACTTTTTAATATGGAATATTATTGTCTGTTCTACTTGGCTAAATCACTACTTCATAGTTAAGTATTAGTGGCAGTAGTGTGAAAGAATTAAATATAGGATAAAGTTTCCTTTCAATACCTGCAAGCTGCTGCTTGAAGGAAGTTAAGTGGTCTCAGTTGGGAATGGGATACACCAATCTCATCATCACGGTAAGTGGGATAGAGATTTTCTTAACTGTAGGCATAATAATTGAGATATCTGAAGCAAGCAATGCAGTGGCCAATGGCGAGCGATCAAGTCAAAGCTCACAAAATAGGTACCCTGTTAAGATCTCAAACAGTTAG mRNA sequence ATGAAGTTTGTAGCGTGGAAATTGAAGACGGAAGTTAAGTGGTCTCAGTTGGGAATGGGATACACCAATCTCATCATCACGGTAAGTGGGATAGAGATTTTCTTAACTGTAGGCATAATAATTGAGATATCTGAAGCAAGCAATGCAGTGGCCAATGGCGAGCGATCAAGTCAAAGCTCACAAAATAGGTACCCTGTTAAGATCTCAAACAGTTAG Coding sequence (CDS) ATGAAGTTTGTAGCGTGGAAATTGAAGACGGAAGTTAAGTGGTCTCAGTTGGGAATGGGATACACCAATCTCATCATCACGGTAAGTGGGATAGAGATTTTCTTAACTGTAGGCATAATAATTGAGATATCTGAAGCAAGCAATGCAGTGGCCAATGGCGAGCGATCAAGTCAAAGCTCACAAAATAGGTACCCTGTTAAGATCTCAAACAGTTAG Protein sequence MKFVAWKLKTEVKWSQLGMGYTNLIITVSGIEIFLTVGIIIEISEASNAVANGERSSQSSQNRYPVKISNS*
Homology
BLAST of CSPI03G32690 vs. ExPASy TrEMBL
Match: A0A0A0LDU5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G736600 PE=4 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 4.1e-28 Identity = 69/71 (97.18%), Postives = 71/71 (100.00%), Query Frame = 0
Query: 1 MKFVAWKLKTEVKWSQLGMGYTNLIITVSGIEIFLTVGIIIEISEASNAVANGERSSQSS 60
MKFV+WKLKTEVKWSQLGMG+TNLIITVSGIEIFLTVGIIIEISEASNAVANGERSSQSS
Sbjct: 1 MKFVSWKLKTEVKWSQLGMGFTNLIITVSGIEIFLTVGIIIEISEASNAVANGERSSQSS 60
Query: 61 QNRYPVKISNS 72
QNRYPVKISNS
Sbjct: 61 QNRYPVKISNS 71
BLAST of CSPI03G32690 vs. NCBI nr
Match: KGN58912.1 (hypothetical protein Csa_000819 [Cucumis sativus]) HSP 1 Score: 133.3 bits (334), Expect = 8.6e-28 Identity = 69/71 (97.18%), Postives = 71/71 (100.00%), Query Frame = 0
Query: 1 MKFVAWKLKTEVKWSQLGMGYTNLIITVSGIEIFLTVGIIIEISEASNAVANGERSSQSS 60
MKFV+WKLKTEVKWSQLGMG+TNLIITVSGIEIFLTVGIIIEISEASNAVANGERSSQSS
Sbjct: 1 MKFVSWKLKTEVKWSQLGMGFTNLIITVSGIEIFLTVGIIIEISEASNAVANGERSSQSS 60
Query: 61 QNRYPVKISNS 72
QNRYPVKISNS
Sbjct: 61 QNRYPVKISNS 71
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LDU5 | 4.1e-28 | 97.18 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G736600 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KGN58912.1 | 8.6e-28 | 97.18 | hypothetical protein Csa_000819 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 52..71 |
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| cellular_component |
GO:0016021 |
integral component of membrane |
|
