CSPI03G32560 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI03G32560
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr3: 29024635 .. 29026159 (+)
RNA-Seq ExpressionCSPI03G32560
SyntenyCSPI03G32560
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGACATGGCGGCATAAGCTTCCGACACGTCGACACTTTTTATTAAGCCAAATTGGCATTTCAGTCCATCCACTTGCCGCTCATCTTTCTCAATCCTTCACCAATTTAAATGTTCAAATTCATTACTCTTTTTTCTTTTTTTTTTTTCCTCTCTCCGATCGATCCCTCCGGCGTTACGATTAACCGGAGCGGAACTTTCTTTTCTTTGATTTGGATAGGATTTGTTCCTGTTCTACTACGCCACACACATTCCTTATTTATTGTTCTTTCCAATCTCACGATCTGCGGATTTTCGGACTGTACCGGATTTTTTGAATCTGAGATTGAGAGGTGTCCTTCATTTGCTTGTGGTGGAATTCGAGGTACTCTCGGGGAATTCGATCGTGTTTTTGTTGACTGTTCATTTATTTAGAAAGTGCTTTTAGAGAAGCTTCGACCTGCTTCGACAAAATAGGTAGGAGCTCACGGGAATCACTTGTATGAGCTTTCTGAACAGTTGTTTTGAAAGGGCGACGTATTCGAGAAGTCTGTCGTTTCGTTTAGTTTTTTTCGTGAGGAAATTTCGGTGAAGGAAAAGAGTACAGAAATGAATTTGTTTGTTTGTTTGTTTGTTCCTGTGCTTCTGTTGAATGTACTGAGGTGGGATAACGTCAATCCAGTATTTTCGTTTTTAGGTTTGTGTCACAGTTTTCTCAGCTGGAAATTTGGGTGTTTTTCTTTTCTTTTCCTGTAAAATCTTAATGAACTGAGAAAGTTGCGACCCCCATTAGTCTGATTTTTTATTTTTTTTATTGTTTTTGATAATTTGATTTGAAAAGCCAAGGATTTGATGTTTTGGTGTTAATTGGTATGGTGGTACTTTCAACTTTTCCTTTTGAGAAGAGATAGAATTGAGTAATTGGAAAGAATTTTTGTTTATATGTATTTATTGTTGTTTCTACTGTCGTCTGTTGCAGTTTGTCTGCAATATCAAGTCTCGGTGGTTATTGCCTTAGCTTGAATTCTTTGAAATTAAAGCAGGTTTTCAAGAAGCTACTTTTTGACTTTTTTTTTCCCCACTTTTTTATTCTTTTGCAGGGTTTTCTTCTTTATAAAATCATCTCTTTCCGTAATAATTTTTCTGGATGTAACTGAGGCGCGTGAAAGTAAGTTGCTCGGCAAAGTTATCGCCATGCAGGTACTTTCCGAAGTTCACCTTTAAATTGAATTTCATTTTTGTTTTTGTGAACTCTTCATTCCTCCCTTTGTTCTGCTTCTCTTTATCTCCTTTTCTGTCCTTGTGTTTTTTACATATTTCCTGTAAATTTAAAATGAATATCTTTGGTTTGTTTTAGAACATTGGATTCTTTCTGTAGCAACACTTGATTCCTTGATAAATCCTTTCAAATTTCACTTTTTAAACTTGGGATTTTTTATTCCTTTCAAAAAGGGAAAAAAAAAAAAAAAAACTCTGATCCTTCACTCCTTTCTGGTTTACCGGATTTTCCAGGTAAGAGCCAGGTTTTCAAATCTCATCAGCAGC

mRNA sequence

ATGTCGACATGGCGGCATAAGCTTCCGACACGTCGACACTTTTTATTAAGCCAAATTGGCATTTCAGTCCATCCACTTGCCGCTCATCTTTCTCAATCCTTCACCAATTTAAATGATTTGTTCCTGTTCTACTACGCCACACACATTCCTTATTTATTGTTCTTTCCAATCTCACGATCTGCGGATTTTCGGACTGTACCGGATTTTTTGAATCTGAGATTGAGAGGTGTCCTTCATTTGCTTGTGGTGGAATTCGAGGGCGACGTATTCGAGAAGTCTGTCGTTTCGTTTAGTTTTTTTCGTGAGGAAATTTCGGTGAAGGAAAAGAGTACAGAAATGAATTTGTTTGTTTGTTTGTTTGTTCCTGTGCTTCTGTTGAATGTACTGAGGTGGGATAACGTCAATCCATTTGTCTGCAATATCAAGTCTCGGTGGGTTTTCTTCTTTATAAAATCATCTCTTTCCGTAATAATTTTTCTGGATGTAACTGAGGCGCGTGAAAGTAAGTTGCTCGGCAAAGTTATCGCCATGCAGGTAAGAGCCAGGTTTTCAAATCTCATCAGCAGC

Coding sequence (CDS)

ATGTCGACATGGCGGCATAAGCTTCCGACACGTCGACACTTTTTATTAAGCCAAATTGGCATTTCAGTCCATCCACTTGCCGCTCATCTTTCTCAATCCTTCACCAATTTAAATGATTTGTTCCTGTTCTACTACGCCACACACATTCCTTATTTATTGTTCTTTCCAATCTCACGATCTGCGGATTTTCGGACTGTACCGGATTTTTTGAATCTGAGATTGAGAGGTGTCCTTCATTTGCTTGTGGTGGAATTCGAGGGCGACGTATTCGAGAAGTCTGTCGTTTCGTTTAGTTTTTTTCGTGAGGAAATTTCGGTGAAGGAAAAGAGTACAGAAATGAATTTGTTTGTTTGTTTGTTTGTTCCTGTGCTTCTGTTGAATGTACTGAGGTGGGATAACGTCAATCCATTTGTCTGCAATATCAAGTCTCGGTGGGTTTTCTTCTTTATAAAATCATCTCTTTCCGTAATAATTTTTCTGGATGTAACTGAGGCGCGTGAAAGTAAGTTGCTCGGCAAAGTTATCGCCATGCAGGTAAGAGCCAGGTTTTCAAATCTCATCAGCAGC

Protein sequence

MSTWRHKLPTRRHFLLSQIGISVHPLAAHLSQSFTNLNDLFLFYYATHIPYLLFFPISRSADFRTVPDFLNLRLRGVLHLLVVEFEGDVFEKSVVSFSFFREEISVKEKSTEMNLFVCLFVPVLLLNVLRWDNVNPFVCNIKSRWVFFFIKSSLSVIIFLDVTEARESKLLGKVIAMQVRARFSNLISS
Homology
[Close]
BLAST of CSPI03G32560 vs. ExPASy TrEMBL
Match: A0A0A0LD94 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G734990 PE=4 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 1.1e-96
Identity = 188/189 (99.47%), Postives = 188/189 (99.47%), Query Frame = 0 

Query: 1   MSTWRHKLPTRRHFLLSQIGISVHPLAAHLSQSFTNLNDLFLFYYATHIPYLLFFPISRS 60
           MSTWRHKLPTRRHFLLSQIGISVHPLAAHLSQSFTNLNDLFLFYYATHIPYLLFFPISRS
Sbjct: 1   MSTWRHKLPTRRHFLLSQIGISVHPLAAHLSQSFTNLNDLFLFYYATHIPYLLFFPISRS 60

Query: 61  ADFRTVPDFLNLRLRGVLHLLVVEFEGDVFEKSVVSFSFFREEISVKEKSTEMNLFVCLF 120
           ADFRTVPDFLNLRLRGVLHLLVVEFEGDVFEKSVVSFSFFREEISVKEKSTEMNLFVCLF
Sbjct: 61  ADFRTVPDFLNLRLRGVLHLLVVEFEGDVFEKSVVSFSFFREEISVKEKSTEMNLFVCLF 120

Query: 121 VPVLLLNVLRWDNVNPFVCNIKSRWVFFFIKSSLSVIIFLDVTEARESKLLGKVIAMQVR 180
           VPVLLLNVLRWDNVNPFVCNIKSR VFFFIKSSLSVIIFLDVTEARESKLLGKVIAMQVR
Sbjct: 121 VPVLLLNVLRWDNVNPFVCNIKSR-VFFFIKSSLSVIIFLDVTEARESKLLGKVIAMQVR 180

Query: 181 ARFSNLISS 190
           ARFSNLISS
Sbjct: 181 ARFSNLISS 188

[Close]
BLAST of CSPI03G32560 vs. NCBI nr
Match: KGN58899.1 (hypothetical protein Csa_000789 [Cucumis sativus])

HSP 1 Score: 362.5 bits (929), Expect = 2.3e-96
Identity = 188/189 (99.47%), Postives = 188/189 (99.47%), Query Frame = 0 

Query: 1   MSTWRHKLPTRRHFLLSQIGISVHPLAAHLSQSFTNLNDLFLFYYATHIPYLLFFPISRS 60
           MSTWRHKLPTRRHFLLSQIGISVHPLAAHLSQSFTNLNDLFLFYYATHIPYLLFFPISRS
Sbjct: 1   MSTWRHKLPTRRHFLLSQIGISVHPLAAHLSQSFTNLNDLFLFYYATHIPYLLFFPISRS 60

Query: 61  ADFRTVPDFLNLRLRGVLHLLVVEFEGDVFEKSVVSFSFFREEISVKEKSTEMNLFVCLF 120
           ADFRTVPDFLNLRLRGVLHLLVVEFEGDVFEKSVVSFSFFREEISVKEKSTEMNLFVCLF
Sbjct: 61  ADFRTVPDFLNLRLRGVLHLLVVEFEGDVFEKSVVSFSFFREEISVKEKSTEMNLFVCLF 120

Query: 121 VPVLLLNVLRWDNVNPFVCNIKSRWVFFFIKSSLSVIIFLDVTEARESKLLGKVIAMQVR 180
           VPVLLLNVLRWDNVNPFVCNIKSR VFFFIKSSLSVIIFLDVTEARESKLLGKVIAMQVR
Sbjct: 121 VPVLLLNVLRWDNVNPFVCNIKSR-VFFFIKSSLSVIIFLDVTEARESKLLGKVIAMQVR 180

Query: 181 ARFSNLISS 190
           ARFSNLISS
Sbjct: 181 ARFSNLISS 188

The following BLAST results are available for this feature:
BLAST of CSPI03G32560 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI03G32560 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LD941.1e-9699.47Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G734990 PE=4 SV=1[more]
BLAST of CSPI03G32560 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN58899.12.3e-9699.47hypothetical protein Csa_000789 [Cucumis sativus][more]
BLAST of CSPI03G32560 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G32560.1CSPI03G32560.1mRNA