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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGGGGTTTCTGAGTAAGGTTGATATAAAGAAGAATTGTGAACTTTATGGAGCTCCCGCTTTCTGGGAAACGAATCAAGAGCAAAAAGAGACACAAAGAGTTACCCAGATTGATGAAATATTTAGGTTGAGAATCAGAGAATTGGAGACAGTTCAAATTCGGTTGATTCCATGGCCTGTCTCTTTCGTTCTTTGTGCAGAGAAGAAAATAGAAAAGAGACTGAACGAGAGAAATGGAGCGGCCGATTGCCCACTGCCGATTGGCCTTTTCCCAATTCACGCGCAATCACACCTTTTATATAGCCAACCCCCGCCACCGGTCACCGGTCACCGATCGCCAAGCGCCTATGTATATTATTATTCTTATTTCCTTTTAATTCAACTATTAGATTGATTTACCATATAGAAAATAA mRNA sequence ATGGGGTTTCTGAGTAAGGTTGATATAAAGAAGAATTGTGAACTTTATGGAGCTCCCGCTTTCTGGGAAACGAATCAAGAGCAAAAAGAGACACAAAGAGTTACCCAGATTGATGAAATATTTAGGTTGAGAATCAGAGAATTGGAGACAGTTCAAATTCGGTTGATTCCATGGCCTGTCTCTTTCGTTCTTTGTGCAGAGAAGAAAATAGAAAAGAGACTGAACGAGAGAAATGGAGCGGCCGATTGCCCACTGCCGATTGGCCTTTTCCCAATTCACGCGCAATCACACCTTTTATATAGCCAACCCCCGCCACCGGTCACCGGTCACCGATCGCCAAGCGCCTATATTGATTTACCATATAGAAAATAA Coding sequence (CDS) ATGGGGTTTCTGAGTAAGGTTGATATAAAGAAGAATTGTGAACTTTATGGAGCTCCCGCTTTCTGGGAAACGAATCAAGAGCAAAAAGAGACACAAAGAGTTACCCAGATTGATGAAATATTTAGGTTGAGAATCAGAGAATTGGAGACAGTTCAAATTCGGTTGATTCCATGGCCTGTCTCTTTCGTTCTTTGTGCAGAGAAGAAAATAGAAAAGAGACTGAACGAGAGAAATGGAGCGGCCGATTGCCCACTGCCGATTGGCCTTTTCCCAATTCACGCGCAATCACACCTTTTATATAGCCAACCCCCGCCACCGGTCACCGGTCACCGATCGCCAAGCGCCTATATTGATTTACCATATAGAAAATAA Protein sequence MGFLSKVDIKKNCELYGAPAFWETNQEQKETQRVTQIDEIFRLRIRELETVQIRLIPWPVSFVLCAEKKIEKRLNERNGAADCPLPIGLFPIHAQSHLLYSQPPPPVTGHRSPSAYIDLPYRK*
Homology
BLAST of CSPI03G32020 vs. ExPASy TrEMBL
Match: A0A0A0LA33 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G733940 PE=4 SV=1) HSP 1 Score: 229.2 bits (583), Expect = 9.6e-57 Identity = 108/110 (98.18%), Postives = 110/110 (100.00%), Query Frame = 0
Query: 1 MGFLSKVDIKKNCELYGAPAFWETNQEQKETQRVTQIDEIFRLRIRELETVQIRLIPWPV 60
MGFLSKVDIKKNCELYGAPAFWETNQEQKETQRVT+IDEIFRLRIRELETVQI+LIPWPV
Sbjct: 1 MGFLSKVDIKKNCELYGAPAFWETNQEQKETQRVTEIDEIFRLRIRELETVQIQLIPWPV 60
Query: 61 SFVLCAEKKIEKRLNERNGAADCPLPIGLFPIHAQSHLLYSQPPPPVTGH 111
SFVLCAEKKIEKRLNERNGAADCPLPIGLFPIHAQSHLLYSQPPPPVTGH
Sbjct: 61 SFVLCAEKKIEKRLNERNGAADCPLPIGLFPIHAQSHLLYSQPPPPVTGH 110
BLAST of CSPI03G32020 vs. NCBI nr
Match: KAE8650999.1 (hypothetical protein Csa_002313 [Cucumis sativus]) HSP 1 Score: 226.1 bits (575), Expect = 1.7e-55 Identity = 107/109 (98.17%), Postives = 109/109 (100.00%), Query Frame = 0
Query: 1 MGFLSKVDIKKNCELYGAPAFWETNQEQKETQRVTQIDEIFRLRIRELETVQIRLIPWPV 60
MGFLSKVDIKKNCELYGAPAFWETNQEQKETQRVT+IDEIFRLRIRELETVQI+LIPWPV
Sbjct: 1 MGFLSKVDIKKNCELYGAPAFWETNQEQKETQRVTEIDEIFRLRIRELETVQIQLIPWPV 60
Query: 61 SFVLCAEKKIEKRLNERNGAADCPLPIGLFPIHAQSHLLYSQPPPPVTG 110
SFVLCAEKKIEKRLNERNGAADCPLPIGLFPIHAQSHLLYSQPPPPVTG
Sbjct: 61 SFVLCAEKKIEKRLNERNGAADCPLPIGLFPIHAQSHLLYSQPPPPVTG 109
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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| A0A0A0LA33 | 9.6e-57 | 98.18 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G733940 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KAE8650999.1 | 1.7e-55 | 98.17 | hypothetical protein Csa_002313 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
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InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 102..123 |
Relationships
The following mRNA feature(s) are a part of this gene:
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