CSPI03G30260 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI03G30260
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr3: 27660696 .. 27661976 (+)
RNA-Seq ExpressionCSPI03G30260
SyntenyCSPI03G30260
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCTATGGCTATGGCTATTCCCTAGTGAAGAAAAAGGGTTGGTGAATTAGGGGTTTGGTTTGATATTAGGGTTGTGCCTAGCTGAGATCATATCATATCACAAAAATGGGAGTATATGCATGCCTCCTAATTTCCCTCTTATTAATTCTTCAAACTGTTTGGATTTCATCCCTTTCTAATGCTTCCAATAATTCTTTTCCATATGAATCTCTTTCCAACCCTCCTCTTCAAACCCATCATCTTCATCAACAACTACGCTTGGGTGAGATTATATTTATTCAAAACCTCTTTATCTTTTGTTTTTGTTTATTGATTTTTAAATTGTGTTTACGAGTACCCTCAAATTATTTAAATTAATCTTAGAAATGTGTTGTGTTTGTTTTGAAATATATAGACAGAGTACTCCTCTCTATCTTTATCTTGACGAAAGATTCATATTTTGTTTTGGTTAAAATATCATTTTGATTATGTATAATATTAGTTCATCAACTTTTAACATTAATCTCTATCTCATGAGTTTAAAAAAAAATGGTGTTTATTAATATTTTCTTTATAAATCAATCAAATATATGTGCATAATGTGTCTTTTCCATTACAGTTATTATTGAACTAATTTTGATAAGATTTCTAGAAAATAAAATGATCAAAAATCGATAATTAAAAAATACACAAGGTCATGTACCTATACAAAATAACATATATATGGAATTTGATATTATTCTTTATTTCACCATATACTTCTTTGACTTTGATCCTAACTTTATCATAATTTTCTTTTCCATTGTTGAGTGAAAAACAATTTTTTATAGAGGTTTGAAATTAAGGTTTTCATTCAATAACTTTTTTTTAGAAAGTTGTGAAAATTAAAGGAAAATTATGTCAAACATTTACTTTTGGTTTTTAAGATATGGAATTGATAAATGATGAGGAATCGTTAATTATTTATTGTCTTTTGGTTTGGAGTGAAAGGAGGGGGTGGCAAAGAAGAGAATAATAAGACGGCCGCGGAGAGTTGGACTGTTTCAAAGGCTAAAGGGGGCGGAAGGTCCGGCGCCGGCGGGGCAGGAGCCAACAACCACCGGCCGGGAAAGGCGAAGAACGCAGCTTCCACTTTGATGAACTCAAATAACAACATAATAATAATTACCACTCTCCTCCTCTCTTCCTTTTTATACTTGTTTTAAATCTTCTTTTTTTCATTCATTGAAATATGGAATAAGATCAAAACCCTATTTATATACACACATACATCTTTTTGTTTGAATAAATTTTTGTTATCGAC

mRNA sequence

GCTATGGCTATGGCTATTCCCTAGTGAAGAAAAAGGGTTGGTGAATTAGGGGTTTGGTTTGATATTAGGGTTGTGCCTAGCTGAGATCATATCATATCACAAAAATGGGAGTATATGCATGCCTCCTAATTTCCCTCTTATTAATTCTTCAAACTGTTTGGATTTCATCCCTTTCTAATGCTTCCAATAATTCTTTTCCATATGAATCTCTTTCCAACCCTCCTCTTCAAACCCATCATCTTCATCAACAACTACGCTTGGTGAAAGGAGGGGGTGGCAAAGAAGAGAATAATAAGACGGCCGCGGAGAGTTGGACTGTTTCAAAGGCTAAAGGGGGCGGAAGGTCCGGCGCCGGCGGGGCAGGAGCCAACAACCACCGGCCGGGAAAGGCGAAGAACGCAGCTTCCACTTTGATGAACTCAAATAACAACATAATAATAATTACCACTCTCCTCCTCTCTTCCTTTTTATACTTGTTTTAAATCTTCTTTTTTTCATTCATTGAAATATGGAATAAGATCAAAACCCTATTTATATACACACATACATCTTTTTGTTTGAATAAATTTTTGTTATCGAC

Coding sequence (CDS)

ATGGGAGTATATGCATGCCTCCTAATTTCCCTCTTATTAATTCTTCAAACTGTTTGGATTTCATCCCTTTCTAATGCTTCCAATAATTCTTTTCCATATGAATCTCTTTCCAACCCTCCTCTTCAAACCCATCATCTTCATCAACAACTACGCTTGGTGAAAGGAGGGGGTGGCAAAGAAGAGAATAATAAGACGGCCGCGGAGAGTTGGACTGTTTCAAAGGCTAAAGGGGGCGGAAGGTCCGGCGCCGGCGGGGCAGGAGCCAACAACCACCGGCCGGGAAAGGCGAAGAACGCAGCTTCCACTTTGATGAACTCAAATAACAACATAATAATAATTACCACTCTCCTCCTCTCTTCCTTTTTATACTTGTTTTAA

Protein sequence

MGVYACLLISLLLILQTVWISSLSNASNNSFPYESLSNPPLQTHHLHQQLRLVKGGGGKEENNKTAAESWTVSKAKGGGRSGAGGAGANNHRPGKAKNAASTLMNSNNNIIIITTLLLSSFLYLF*
Homology
[Close]
BLAST of CSPI03G30260 vs. ExPASy TrEMBL
Match: A0A0A0LCI5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G710765 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 4.4e-57
Identity = 124/125 (99.20%), Postives = 124/125 (99.20%), Query Frame = 0 

Query: 1   MGVYACLLISLLLILQTVWISSLSNASNNSFPYESLSNPPLQTHHLHQQLRLVKGGGGKE 60
           MGVYACLLISLLLILQTVWISSLSNASNNSFPYESLSNPPLQTHHLHQQ RLVKGGGGKE
Sbjct: 1   MGVYACLLISLLLILQTVWISSLSNASNNSFPYESLSNPPLQTHHLHQQPRLVKGGGGKE 60

Query: 61  ENNKTAAESWTVSKAKGGGRSGAGGAGANNHRPGKAKNAASTLMNSNNNIIIITTLLLSS 120
           ENNKTAAESWTVSKAKGGGRSGAGGAGANNHRPGKAKNAASTLMNSNNNIIIITTLLLSS
Sbjct: 61  ENNKTAAESWTVSKAKGGGRSGAGGAGANNHRPGKAKNAASTLMNSNNNIIIITTLLLSS 120

Query: 121 FLYLF 126
           FLYLF
Sbjct: 121 FLYLF 125

[Close]
BLAST of CSPI03G30260 vs. NCBI nr
Match: KGN58897.2 (hypothetical protein Csa_001334 [Cucumis sativus])

HSP 1 Score: 221.9 bits (564), Expect = 3.2e-54
Identity = 122/125 (97.60%), Postives = 122/125 (97.60%), Query Frame = 0 

Query: 1   MGVYACLLISLLLILQTVWISSLSNASNNSFPYESLSNPPLQTHHLHQQLRLVKGGGGKE 60
           MGVYACLLISLLLILQTVWISSLSNASNNSFPYESLSNPPLQTHHLHQQ RL  GGGGKE
Sbjct: 1   MGVYACLLISLLLILQTVWISSLSNASNNSFPYESLSNPPLQTHHLHQQPRL--GGGGKE 60

Query: 61  ENNKTAAESWTVSKAKGGGRSGAGGAGANNHRPGKAKNAASTLMNSNNNIIIITTLLLSS 120
           ENNKTAAESWTVSKAKGGGRSGAGGAGANNHRPGKAKNAASTLMNSNNNIIIITTLLLSS
Sbjct: 61  ENNKTAAESWTVSKAKGGGRSGAGGAGANNHRPGKAKNAASTLMNSNNNIIIITTLLLSS 120

Query: 121 FLYLF 126
           FLYLF
Sbjct: 121 FLYLF 123

[Close]
BLAST of CSPI03G30260 vs. NCBI nr
Match: KAG6581619.1 (hypothetical protein SDJN03_21621, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 83.6 bits (205), Expect = 1.4e-12
Identity = 73/129 (56.59%), Postives = 82/129 (63.57%), Query Frame = 0 

Query: 1   MGVYACLLISLLLILQTVWISSLSNA----SNNSFPYESLSNPPLQTHHLHQQLRLVKGG 60
           MGVYACLLISLLLI QT  ISSLSN     SN+SF     ++ PLQ HH   QL LV G 
Sbjct: 1   MGVYACLLISLLLIFQTHSISSLSNGSLPISNHSF-----NSQPLQHHH---QL-LVSGR 60

Query: 61  GGKEENNKTAAESWTVSKAKGGGRSGAGGAGANNHRPGKAKNAASTLMNSNNNIIIITTL 120
              EEN  T      V KAK GGRSG+ GAG NNHRPGKAKNAA++L   N    II  +
Sbjct: 61  DDGEENTTTV--KLVVLKAK-GGRSGSAGAGTNNHRPGKAKNAAASLFEFN----IIYFV 113

Query: 121 LLSSFLYLF 126
           L S+ L+LF
Sbjct: 121 LNSAGLFLF 113

The following BLAST results are available for this feature:
BLAST of CSPI03G30260 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI03G30260 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LCI54.4e-5799.20Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G710765 PE=4 SV=1[more]
BLAST of CSPI03G30260 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN58897.23.2e-5497.60hypothetical protein Csa_001334 [Cucumis sativus][more]
KAG6581619.11.4e-1256.59hypothetical protein SDJN03_21621, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of CSPI03G30260 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 55..98

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G30260.1CSPI03G30260.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006468 protein phosphorylation
molecular_function GO:0005524 ATP binding
molecular_function GO:0004672 protein kinase activity