CSPI03G30050 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GACAAAAAAGATATTTATTGTTTTGGAAATAATAATAAATGAAACGATGGCGATGAATACGGAAAGAATTAATCACGTTGACCCAAAAACACACCCTCCCCAGTCCCCATCATTCCCTCTTCACCTCTACTTTCCTCAACTCTTAATCCTCAAAACACATCTTCAACCCACAAAACAAAGAAGCACAGGGAAATGTTAAAGCAACATTTCAGCCACCCCCACCCACTGGCCTCTGCAACCCTGGTCGAAGACGGAACGCTCTGCTCCGCCTGCGAATTCCCACTCTCCGGCGCCGCCTTCAAGTGCTCAAAGCCCAAATGCGAATTCCATCTCCACGACCTCTGTTTCGCCCTCCCACCGGAGATCCACCACCCCTCTCACCCAAAACACCCCCTCATCCTCGCCGGATCTCCGCCCTACGTCGGTGGTGAGTTCGCCTGTGATGGCTGTGGTGACGTGGGCTCCGGCTTCATCTACCGGTGCCCACGATGCCAGTTTGATCTACACATCCACTGCGCCGCGTTGCCGGAGACGGTGGTAGGGAAAAACCACGACCATCCGCTCCGGCTTGGGTTCGAGTCAAAAGGAAAAGGATTTTGCTGCGGTGTTTGTGAGGAAGGTTTCGGAAATGGTGGTTGGGTTTATTACTGCGGGGTTTGTGATTTTGGGGTTCATGTTCACTGTTTTGTGGCTGATGATGAGGATGAAGATGAAGAAATAGTGGGGTGATTTTGATGGAGATGAACATGAAGTTGGTTGGTGTTTTCTACTCATATTTTGTAATTGTATAGATGAATTTCAATGTTGTGGATTTTGGCCTATATATGTATTTTGATATGCGTTGGATCCTA GACAAAAAAGATATTTATTGTTTTGGAAATAATAATAAATGAAACGATGGCGATGAATACGGAAAGAATTAATCACGTTGACCCAAAAACACACCCTCCCCAGTCCCCATCATTCCCTCTTCACCTCTACTTTCCTCAACTCTTAATCCTCAAAACACATCTTCAACCCACAAAACAAAGAAGCACAGGGAAATGTTAAAGCAACATTTCAGCCACCCCCACCCACTGGCCTCTGCAACCCTGGTCGAAGACGGAACGCTCTGCTCCGCCTGCGAATTCCCACTCTCCGGCGCCGCCTTCAAGTGCTCAAAGCCCAAATGCGAATTCCATCTCCACGACCTCTGTTTCGCCCTCCCACCGGAGATCCACCACCCCTCTCACCCAAAACACCCCCTCATCCTCGCCGGATCTCCGCCCTACGTCGGTGGTGAGTTCGCCTGTGATGGCTGTGGTGACGTGGGCTCCGGCTTCATCTACCGGTGCCCACGATGCCAGTTTGATCTACACATCCACTGCGCCGCGTTGCCGGAGACGGTGGTAGGGAAAAACCACGACCATCCGCTCCGGCTTGGGTTCGAGTCAAAAGGAAAAGGATTTTGCTGCGGTGTTTGTGAGGAAGGTTTCGGAAATGGTGGTTGGGTTTATTACTGCGGGGTTTGTGATTTTGGGGTTCATGTTCACTGTTTTGTGGCTGATGATGAGGATGAAGATGAAGAAATAGTGGGGTGATTTTGATGGAGATGAACATGAAGTTGGTTGGTGTTTTCTACTCATATTTTGTAATTGTATAGATGAATTTCAATGTTGTGGATTTTGGCCTATATATGTATTTTGATATGCGTTGGATCCTA ATGTTAAAGCAACATTTCAGCCACCCCCACCCACTGGCCTCTGCAACCCTGGTCGAAGACGGAACGCTCTGCTCCGCCTGCGAATTCCCACTCTCCGGCGCCGCCTTCAAGTGCTCAAAGCCCAAATGCGAATTCCATCTCCACGACCTCTGTTTCGCCCTCCCACCGGAGATCCACCACCCCTCTCACCCAAAACACCCCCTCATCCTCGCCGGATCTCCGCCCTACGTCGGTGGTGAGTTCGCCTGTGATGGCTGTGGTGACGTGGGCTCCGGCTTCATCTACCGGTGCCCACGATGCCAGTTTGATCTACACATCCACTGCGCCGCGTTGCCGGAGACGGTGGTAGGGAAAAACCACGACCATCCGCTCCGGCTTGGGTTCGAGTCAAAAGGAAAAGGATTTTGCTGCGGTGTTTGTGAGGAAGGTTTCGGAAATGGTGGTTGGGTTTATTACTGCGGGGTTTGTGATTTTGGGGTTCATGTTCACTGTTTTGTGGCTGATGATGAGGATGAAGATGAAGAAATAGTGGGGTGA MLKQHFSHPHPLASATLVEDGTLCSACEFPLSGAAFKCSKPKCEFHLHDLCFALPPEIHHPSHPKHPLILAGSPPYVGGEFACDGCGDVGSGFIYRCPRCQFDLHIHCAALPETVVGKNHDHPLRLGFESKGKGFCCGVCEEGFGNGGWVYYCGVCDFGVHVHCFVADDEDEDEEIVG* Homology
BLAST of CSPI03G30050 vs. ExPASy Swiss-Prot
Match: Q7Y0E8 (Probable nucleoredoxin 1-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0405500 PE=2 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 4.8e-06 Identity = 24/66 (36.36%), Postives = 34/66 (51.52%), Query Frame = 0
BLAST of CSPI03G30050 vs. ExPASy Swiss-Prot
Match: Q7Y0F2 (Probable nucleoredoxin 1-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0405900 PE=2 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 1.8e-05 Identity = 26/81 (32.10%), Postives = 39/81 (48.15%), Query Frame = 0
BLAST of CSPI03G30050 vs. ExPASy Swiss-Prot
Match: O80763 (Probable nucleoredoxin 1 OS=Arabidopsis thaliana OX=3702 GN=At1g60420 PE=1 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 5.3e-05 Identity = 26/83 (31.33%), Postives = 39/83 (46.99%), Query Frame = 0
BLAST of CSPI03G30050 vs. ExPASy TrEMBL
Match: A0A0A0LEY9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G705670 PE=4 SV=1) HSP 1 Score: 398.3 bits (1022), Expect = 1.7e-107 Identity = 177/179 (98.88%), Postives = 178/179 (99.44%), Query Frame = 0
BLAST of CSPI03G30050 vs. ExPASy TrEMBL
Match: A0A1S3CGR7 (probable nucleoredoxin 1-1 OS=Cucumis melo OX=3656 GN=LOC103500285 PE=4 SV=1) HSP 1 Score: 369.0 bits (946), Expect = 1.1e-98 Identity = 161/177 (90.96%), Postives = 168/177 (94.92%), Query Frame = 0
BLAST of CSPI03G30050 vs. ExPASy TrEMBL
Match: A0A6J1IYQ9 (uncharacterized protein LOC111481877 OS=Cucurbita maxima OX=3661 GN=LOC111481877 PE=4 SV=1) HSP 1 Score: 328.2 bits (840), Expect = 2.2e-86 Identity = 144/177 (81.36%), Postives = 153/177 (86.44%), Query Frame = 0
BLAST of CSPI03G30050 vs. ExPASy TrEMBL
Match: A0A6J1F936 (uncharacterized protein LOC111441955 OS=Cucurbita moschata OX=3662 GN=LOC111441955 PE=4 SV=1) HSP 1 Score: 324.7 bits (831), Expect = 2.4e-85 Identity = 141/176 (80.11%), Postives = 153/176 (86.93%), Query Frame = 0
BLAST of CSPI03G30050 vs. ExPASy TrEMBL
Match: A0A5A7UBP3 (Putative nucleoredoxin 1-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold148G00350 PE=4 SV=1) HSP 1 Score: 321.6 bits (823), Expect = 2.0e-84 Identity = 140/155 (90.32%), Postives = 146/155 (94.19%), Query Frame = 0
BLAST of CSPI03G30050 vs. NCBI nr
Match: XP_004151553.1 (uncharacterized protein LOC101210060 [Cucumis sativus]) HSP 1 Score: 398.3 bits (1022), Expect = 3.5e-107 Identity = 177/179 (98.88%), Postives = 178/179 (99.44%), Query Frame = 0
BLAST of CSPI03G30050 vs. NCBI nr
Match: XP_008461757.1 (PREDICTED: probable nucleoredoxin 1-1 [Cucumis melo]) HSP 1 Score: 369.0 bits (946), Expect = 2.3e-98 Identity = 161/177 (90.96%), Postives = 168/177 (94.92%), Query Frame = 0
BLAST of CSPI03G30050 vs. NCBI nr
Match: XP_038905399.1 (uncharacterized protein LOC120091443 [Benincasa hispida]) HSP 1 Score: 346.7 bits (888), Expect = 1.2e-91 Identity = 152/176 (86.36%), Postives = 161/176 (91.48%), Query Frame = 0
BLAST of CSPI03G30050 vs. NCBI nr
Match: KAE8650947.1 (hypothetical protein Csa_002655 [Cucumis sativus]) HSP 1 Score: 345.9 bits (886), Expect = 2.1e-91 Identity = 153/155 (98.71%), Postives = 154/155 (99.35%), Query Frame = 0
BLAST of CSPI03G30050 vs. NCBI nr
Match: XP_023528190.1 (uncharacterized protein LOC111791179 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 332.4 bits (851), Expect = 2.4e-87 Identity = 146/177 (82.49%), Postives = 154/177 (87.01%), Query Frame = 0
BLAST of CSPI03G30050 vs. TAIR 10
Match: AT2G44380.1 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 183.3 bits (464), Expect = 1.7e-46 Identity = 86/179 (48.04%), Postives = 108/179 (60.34%), Query Frame = 0
BLAST of CSPI03G30050 vs. TAIR 10
Match: AT2G44370.1 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 180.3 bits (456), Expect = 1.4e-45 Identity = 85/177 (48.02%), Postives = 111/177 (62.71%), Query Frame = 0
BLAST of CSPI03G30050 vs. TAIR 10
Match: AT2G17740.1 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 177.6 bits (449), Expect = 9.2e-45 Identity = 80/176 (45.45%), Postives = 109/176 (61.93%), Query Frame = 0
BLAST of CSPI03G30050 vs. TAIR 10
Match: AT2G28270.1 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 170.6 bits (431), Expect = 1.1e-42 Identity = 78/175 (44.57%), Postives = 102/175 (58.29%), Query Frame = 0
BLAST of CSPI03G30050 vs. TAIR 10
Match: AT5G43520.1 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 168.7 bits (426), Expect = 4.3e-42 Identity = 82/184 (44.57%), Postives = 104/184 (56.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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