CSPI03G27670 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI03G27670
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionEthylene-responsive transcription factor-like protein
LocationChr3: 25195742 .. 25200256 (-)
RNA-Seq ExpressionCSPI03G27670
SyntenyCSPI03G27670
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATCAACTCTCTCCCTATCTCTCTCTCTCTCTATATATATTTCCATTGATAAGTTCATCACTCCAAACAAAAACAAATTCTTTTTTGAAAACCTGCAATTTTTATAAAGGTGGTAGAGATTATAGTGATGATGATGATGCATGTGTTAAGGATTTTTCATATAATCTCTTAATTTTTTTAAAATGTTTACCACCTTCCTTTTTCTCTTCATAATCTCAACCCCCTCTTAGTTTTTTCGTTTCTTTTCTTTTCAATCGTTCTTCTACGCCGTCGCCGCTGCCGTCTCCTCCTCAGGTACGAACGGCGACTCTCTCTATTTGATCGCTTTTGCTGTTTTCGGTTATCGGCATTTGGCGTTGACGGGAATAATCGAATGCTGATGAGTTGTTTGTTGTTGGTTTTCTCTTTTGGGTTTCTGAGTTGGCGTTTATTTAGTATTGGGTTTGTTTAGATTAACGATTTCATGAATTGGGTCTGTGGATTTTTGGTTGACTTGTAATGAGAAGAATGAGTTTGATAGTTTTCTCTTGCGTTTACATTGAATTTTGAGTTCAACGTCTGGGATTGGAGTTTTAGAAATGAATGGAAGATCAAGAAGGAGAAGGTTTGAACATTCAAGTTGACTTGGCAGTTGGGAGATTTCGATTTGTTTTGAGTTTGTTCATACTTTTAACTATTTGAGCAGTATTCAGCTCAGTTGAACGATCTAGATTTGTTGATGCAGCCAGCCAAATTGGTTTAGGTGTTCTGTGTTCTGTGTTTGTTTTTGCTCAATTCAAGTTCTTATTAACAGCTAACTGTTAGCTTTGTACTTGCTCTTTATTGCTTCTCGGGTGGTGATAGTTTAAACTGGCTTGGCACAACTTTTTGATTAGTGATTCACGTTATGATGCTTGAATTTGTATATTAGTATCTTATGTTGCACACATCTTAACTCTATTCAGATTGCTTCAGTAGAAAGAAAATGAAGTTGAACGCTAGGATCATTTAGAGTCAGTTTGCGATGAATTTCAAATTGATTAGAAAGAAAGCTAATCTTGTAGATTATGTTCTCTGAAATGGGCTAGAGAAGATGAGAGTTCACCATAATCTATTCATTCATTTGGGTCGAGTCTCTCGAACATATGAATCAATTTGAAAGTAAGTCATCCTTATTGGTCATTTGTAGAAACGTGCATTCTTTATACAGTTAATCAAATAAGCTCTGTTCTTTTAGCTTTATCCATCAGTTTATTCGCTACATGTCGGCAAGTGTTTTGGAATGTTTTTTTTTTCTTCTCATTGAAGCTGATTGAGCTTGTTCTGCTTGTCTGGTCTAGATGTGAGGTGATCCTGGAAAAAAGCCAAACAATACAACTGATAACAGGATCAAAGCTAATATGGTGAGCTTAAGAAGACGAAAACTCCTGGGACTTTACTCTGGTAAAGGTTACTTTTTAAAGCTATGGTATTGAGAAAAGGGCTCATTTTGCTTAAGCTAATTAATGTGTGTTGAGAAGAACTGACATTTTAAAGATTATATATATACATATAGTTTTGCTCTTTTGATTCATGATTTTGAATGAAATTAACTCAGAGGAACTAAAATTATATGACTTACCCATGTGGGACTCATAGGCAAAGCGTCATTTGTTGCTCCAGTTTTGAAGTTTTCTGAAAATTTGACTGCTGAAGATCATGTGCACTGTACGAGCTTCGTTAGGGTTTATCCCATCTGTTCAGATAAAGTTAACAAGATAGAGGAGGTCAGTAGATTAAGATTTCCAATTTCTTTAATCACTACATAATTACATCATATTGTTAATAAAAGAACTGGCTACCGCCTACCTTCACCATTTCTCTCAGTACATAACTTCTCACTTTATAACCTTATTTCTTTCTATTTGTTTCATAGCTTAATTTGCTGCATTTTTTGTACTTCACAATTCTTATCTGAGGCAAAATTATCTGTAAAATAAAAATGGACATGTTTTTTTAATAGCAATTACTATATTGGTGTTAGGTCAATGTACAAGATTGCACGAGTTTCCCTCAAATGTGACTCTCATGTTAAGAAAAGATTATTAGTTATTCCCATATTCTTCATGATAGCTAACTTACAAGTAATGCATAATATTACCTATCTTGGTATGTCATTTTTGTTGAATAGAATATGTGTCCTCCTGTGTCCCAAAATAAACTTAGAATTATGGACATTTGATTATTGATTTCACGTTCAAATTTGGCATAATTTCAACATCACCAAGTAGATGTATCATGTATGTTTAATAAAAGCCAAAAAGGAAAAAAAAAAAAAATCAAAAGAAATATACTTACAAAAGTTCTACCATTCCTTCTTTCCAAAGGCACCAAAAGAGAGACTGTGTAGCGCAACTCCAAAGAACTTATCCTTTACCACCAAAGGCAAAAGTATTAATCTCATCAAGCTTCTTATTATATAGTCACGGCGTAATCTACATAATGCTAATCTGGATAAAATGGCTCATATGCACCCTTAACATAAGTCTTACCTTTTAATAAATGCTCATCATCTCAGTTAGTACTGGTTTAAGTTTGACATAGAACCTTATTCGCTGGAGGTCTTGCAATGTTCTTATGGGAATGCTATGCATGTTCCATAAGTAAAAGAAGATTAATTATCCTTTTTCTTCACTTTCCTTTTTTCTCCCAATGCAAAAATGGTTTGTCTTTTAGTACATAGCATGTCTGCTGATTGCTGGATGCTCATCTCGATAATATGACGTTTTTCAGAATCCAACTGCAAATATAGAGCCCGAATCATCAGGGGTATCTGTTTTGGATACATCAAAAGAGCAAATTGACACGACAAACGACGAGCCAATTGCAGGTTTGTTTGGCTTCAAATCATCCCTTCACATCCATAAGTTACATGAATAGATGTGATATTAGAATAGTAAGGATATAAGTCGATCCTTTGATGTGAGATTATTTGTTATATTTTATGCTATTGATTCATCTTTAGGTGGGGAAGGGTGGGGTAGTTCACATTGCATTTGCCTTGTAGATGGATAAACATCTGTCTTCTTAATGGGTCTGACATGAGCATAGCTAAAAAAATAAGTTATATCTACTTTTTTTTAATCTTGTAGGTTCGGATCAGTAATGGATTTGTAGAGAGGTCCATTGGCTGTTTTGCTTGTATGTGAAGCTGTCACTTCGTAAACGATATAGGTTTCCTTTTCCATGTTGCCTCCATTTCCAAAATACTATATAACCATCAGAGCTTTTCTAGTCCCAGTTGGAGTAATTTAGCAGTTCTACTAACAGAAGGAGTAAAATAACTGATAACCCATTTCTTTTTTCTGTGGCCTTATATCTTAGGTGTACTGCTAGGAAGATATGATGATTTTTTTTTTCACAGAACTTTAAAGCGACATCTACTATTAATTGTAACATTCAGAGATGAGAGATGATTCTTTTAATCTATATTTAGTCATAATATAATCATGATATATTATTATGACTCAAACTTCATGCTATTCTATCTGCAGACCCTCCTGTAAAGCGCAGAAAGAGACACCGGAGAAAGCATTTTCCTGACGAATCTTTCTTAATGAGAGGTGTTTATTTCAAGAACATGAAATGGCAGGCTGCTATAAAGGTTGACAAAAAACAAATACACTTGGGAACTGTAGGATCACAAGAAGAGGCTGCTCATTTGTATGACAGGTAGAGTCTTGAAGTGACACAAATTTTCAGCTGATTGATGAATGGGACTTTGTTCTTAAGATAAACAACAAAGGTCATCAAATGTGACCAATGTTTTAACCGGATAATATGCTATTCAATTTATACTTGAAAGCAATATTTTTAGCATTTTAAAAAACGAGGGGAAAAAAAAGAACAACCCGAATGAGCTGAACATCAGTCTTCTGCTATCCTAGGGCTGCTTTCATGTGTGGAAGGGAACCCAACTTTGAGCTCCCAGAAGAGGAGAAGCAAGAACTGAGAAAGTTTAATTGGGACGAATTTCTAGCAATGACTCGCAACACGATTACTAATAGAAGTAAGTCTCTCTTCTATACAACTTGACAAATGCTGTTACGTCCCATTTAGATCGTATGAGTTATTTATCATCATTATCTTCAGAACAGAAAAGGCTCAGCCCAGAATCAAAGAAGTCTGAACTTTCTTCGCCTGGGAATGACGACTCTAACAAAAGACATGACAAGTTCATTGACCCCTCATTTCTAGAAGATGTGGAACCAGTTGCCTCTACATCTTGAGATTCAAGAGGAAAAAAAATTAGTTCTCCCATCTCTAACATCTCAGTTCAAATATGGCGACCTGCAAATTTGGTGTTTTTAGTTTTTGGGCTGGGCACATCAACCTCATGGAAATTTTGGATGTACATCATTTTAGTAGTCTAGGCAAATCTTTAAGGCGTTGAGCCGATTGATGGAGTGATTTACGGTGATAGGTGCTGATACAAGACATACTCAAGACGCAAGATGGCTCCTATCGTGATTTACGGTGATAGATGAGGAAGAAGAT

mRNA sequence

AATCAACTCTCTCCCTATCTCTCTCTCTCTCTATATATATTTCCATTGATAAGTTCATCACTCCAAACAAAAACAAATTCTTTTTTGAAAACCTGCAATTTTTATAAAGGTGGTAGAGATTATAGTGATGATGATGATGCATGTGTTAAGGATTTTTCATATAATCTCTTAATTTTTTTAAAATGTTTACCACCTTCCTTTTTCTCTTCATAATCTCAACCCCCTCTTAGTTTTTTCGTTTCTTTTCTTTTCAATCGTTCTTCTACGCCGTCGCCGCTGCCGTCTCCTCCTCAGATGTGAGGTGATCCTGGAAAAAAGCCAAACAATACAACTGATAACAGGATCAAAGCTAATATGGTGAGCTTAAGAAGACGAAAACTCCTGGGACTTTACTCTGTTTTGAAGTTTTCTGAAAATTTGACTGCTGAAGATCATGTGCACTGTACGAGCTTCGTTAGGGTTTATCCCATCTGTTCAGATAAAGTTAACAAGATAGAGGAGAATCCAACTGCAAATATAGAGCCCGAATCATCAGGGGTATCTGTTTTGGATACATCAAAAGAGCAAATTGACACGACAAACGACGAGCCAATTGCAGACCCTCCTGTAAAGCGCAGAAAGAGACACCGGAGAAAGCATTTTCCTGACGAATCTTTCTTAATGAGAGGTGTTTATTTCAAGAACATGAAATGGCAGGCTGCTATAAAGGTTGACAAAAAACAAATACACTTGGGAACTGTAGGATCACAAGAAGAGGCTGCTCATTTGTATGACAGGGCTGCTTTCATGTGTGGAAGGGAACCCAACTTTGAGCTCCCAGAAGAGGAGAAGCAAGAACTGAGAAAGTTTAATTGGGACGAATTTCTAGCAATGACTCGCAACACGATTACTAATAGAAAACAGAAAAGGCTCAGCCCAGAATCAAAGAAGTCTGAACTTTCTTCGCCTGGGAATGACGACTCTAACAAAAGACATGACAAGTTCATTGACCCCTCATTTCTAGAAGATGTGGAACCAGTTGCCTCTACATCTTGAGATTCAAGAGGAAAAAAAATTAGTTCTCCCATCTCTAACATCTCAGTTCAAATATGGCGACCTGCAAATTTGGTGTTTTTAGTTTTTGGGCTGGGCACATCAACCTCATGGAAATTTTGGATGTACATCATTTTAGTAGTCTAGGCAAATCTTTAAGGCGTTGAGCCGATTGATGGAGTGATTTACGGTGATAGGTGCTGATACAAGACATACTCAAGACGCAAGATGGCTCCTATCGTGATTTACGGTGATAGATGAGGAAGAAGAT

Coding sequence (CDS)

ATGGTGAGCTTAAGAAGACGAAAACTCCTGGGACTTTACTCTGTTTTGAAGTTTTCTGAAAATTTGACTGCTGAAGATCATGTGCACTGTACGAGCTTCGTTAGGGTTTATCCCATCTGTTCAGATAAAGTTAACAAGATAGAGGAGAATCCAACTGCAAATATAGAGCCCGAATCATCAGGGGTATCTGTTTTGGATACATCAAAAGAGCAAATTGACACGACAAACGACGAGCCAATTGCAGACCCTCCTGTAAAGCGCAGAAAGAGACACCGGAGAAAGCATTTTCCTGACGAATCTTTCTTAATGAGAGGTGTTTATTTCAAGAACATGAAATGGCAGGCTGCTATAAAGGTTGACAAAAAACAAATACACTTGGGAACTGTAGGATCACAAGAAGAGGCTGCTCATTTGTATGACAGGGCTGCTTTCATGTGTGGAAGGGAACCCAACTTTGAGCTCCCAGAAGAGGAGAAGCAAGAACTGAGAAAGTTTAATTGGGACGAATTTCTAGCAATGACTCGCAACACGATTACTAATAGAAAACAGAAAAGGCTCAGCCCAGAATCAAAGAAGTCTGAACTTTCTTCGCCTGGGAATGACGACTCTAACAAAAGACATGACAAGTTCATTGACCCCTCATTTCTAGAAGATGTGGAACCAGTTGCCTCTACATCTTGA

Protein sequence

MVSLRRRKLLGLYSVLKFSENLTAEDHVHCTSFVRVYPICSDKVNKIEENPTANIEPESSGVSVLDTSKEQIDTTNDEPIADPPVKRRKRHRRKHFPDESFLMRGVYFKNMKWQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEFLAMTRNTITNRKQKRLSPESKKSELSSPGNDDSNKRHDKFIDPSFLEDVEPVASTS*
Homology
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BLAST of CSPI03G27670 vs. ExPASy Swiss-Prot
Match: Q56XP9 (Ethylene-responsive transcription factor-like protein At4g13040 OS=Arabidopsis thaliana OX=3702 GN=At4g13040 PE=2 SV=2)

HSP 1 Score: 147.1 bits (370), Expect = 2.4e-34
Identity = 103/226 (45.58%), Postives = 128/226 (56.64%), Query Frame = 0 

Query: 1   MVSLRRRKLLGL-------YSVLKFSENLTAEDHVHCTSFVRVYPICSDKVNKIEENPTA 60
           MVSLRRR+LLGL        + L F   LTAE+ +  T         +      E   T 
Sbjct: 1   MVSLRRRRLLGLCCGPNGYVTPLPF---LTAEEMI--TGIPNPNARAAYNPGPAETVTTV 60

Query: 61  NIEPESSGVSVLDTSKEQIDTTNDEPIADP-----------PVKRRKRHRRKHFPD-ESF 120
            +E ++       T  + +   +D     P           P KRRK+HRRK   + E  
Sbjct: 61  IVEKKAIEERSRRTRSKHMHFRSDYSDISPVNSDSISPKYQPPKRRKQHRRKRVHNQEPC 120

Query: 121 LMRGVYFKNMKWQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKQE 180
           LMRGVY+KNMKWQAAIKV+KKQIHLGT  SQEEAA LYDRAAFMCGREPNFEL EE  +E
Sbjct: 121 LMRGVYYKNMKWQAAIKVEKKQIHLGTFSSQEEAARLYDRAAFMCGREPNFELSEEVIRE 180

Query: 181 LRKFNWDEFLAMTRNTITNRKQK-RLSPESKKSELSSPGNDDSNKR 207
           L++ +W+EFL  TR TITN+K K R+  E  K   S P   +  ++
Sbjct: 181 LKQQSWEEFLNCTRRTITNKKPKSRIEHEDTKINASMPHQPEEEEQ 221

[Close]
BLAST of CSPI03G27670 vs. ExPASy TrEMBL
Match: A0A0A0LCE7 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G630280 PE=4 SV=1)

HSP 1 Score: 445.7 bits (1145), Expect = 1.2e-121
Identity = 226/234 (96.58%), Postives = 226/234 (96.58%), Query Frame = 0 

Query: 1   MVSLRRRKLLGLYS--------VLKFSENLTAEDHVHCTSFVRVYPICSDKVNKIEENPT 60
           MVSLRRRKLLGLYS        VLKFSENLTAEDHVHCTSFVRVYPICSDKVNKIEENPT
Sbjct: 1   MVSLRRRKLLGLYSGKASFVAPVLKFSENLTAEDHVHCTSFVRVYPICSDKVNKIEENPT 60

Query: 61  ANIEPESSGVSVLDTSKEQIDTTNDEPIADPPVKRRKRHRRKHFPDESFLMRGVYFKNMK 120
           ANIEPESSGVSVLDTSKEQIDTTNDEPIADPPVKRRKRHRRKHFPDESFLMRGVYFKNMK
Sbjct: 61  ANIEPESSGVSVLDTSKEQIDTTNDEPIADPPVKRRKRHRRKHFPDESFLMRGVYFKNMK 120

Query: 121 WQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEFLA 180
           WQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEFLA
Sbjct: 121 WQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEFLA 180

Query: 181 MTRNTITNRKQKRLSPESKKSELSSPGNDDSNKRHDKFIDPSFLEDVEPVASTS 227
           MTRNTITNRKQKRLSPESKKSELSSPGNDDSNKRHDKFIDPSFLEDVEPVASTS
Sbjct: 181 MTRNTITNRKQKRLSPESKKSELSSPGNDDSNKRHDKFIDPSFLEDVEPVASTS 234

[Close]
BLAST of CSPI03G27670 vs. ExPASy TrEMBL
Match: A0A1S4E2T2 (ethylene-responsive transcription factor-like protein At4g13040 isoform X6 OS=Cucumis melo OX=3656 GN=LOC103499216 PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 2.3e-104
Identity = 199/214 (92.99%), Postives = 201/214 (93.93%), Query Frame = 0 

Query: 1   MVSLRRRKLLGLYS--------VLKFSENLTAEDHVHCTSFVRVYPICSDKVNKIEENPT 60
           MVSLRRRKLLGLYS        VLKFSENLTAE HVHCTS VRVYPICSD+VNKIEENP 
Sbjct: 1   MVSLRRRKLLGLYSGKASFVAPVLKFSENLTAEVHVHCTSSVRVYPICSDEVNKIEENPI 60

Query: 61  ANIEPESSGVSVLDTSKEQIDTTNDEPIADPPVKRRKRHRRKHFPDESFLMRGVYFKNMK 120
           ANIEPESSGVSVLDTSKEQIDTTN EPIADPPVKRRKRHRRKHFPDESFLMRGVYFKNMK
Sbjct: 61  ANIEPESSGVSVLDTSKEQIDTTNGEPIADPPVKRRKRHRRKHFPDESFLMRGVYFKNMK 120

Query: 121 WQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEFLA 180
           WQAAIKVDKKQIHLGTV SQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEFLA
Sbjct: 121 WQAAIKVDKKQIHLGTVASQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEFLA 180

Query: 181 MTRNTITNRKQKRLSPESKKSELSSPGNDDSNKR 207
           MTRNTITNRKQKRL+PESKKSELSSPGNDDSNKR
Sbjct: 181 MTRNTITNRKQKRLNPESKKSELSSPGNDDSNKR 214

[Close]
BLAST of CSPI03G27670 vs. ExPASy TrEMBL
Match: A0A1S3CCB8 (ethylene-responsive transcription factor-like protein At4g13040 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499216 PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 2.3e-104
Identity = 199/214 (92.99%), Postives = 201/214 (93.93%), Query Frame = 0 

Query: 1   MVSLRRRKLLGLYS--------VLKFSENLTAEDHVHCTSFVRVYPICSDKVNKIEENPT 60
           MVSLRRRKLLGLYS        VLKFSENLTAE HVHCTS VRVYPICSD+VNKIEENP 
Sbjct: 28  MVSLRRRKLLGLYSGKASFVAPVLKFSENLTAEVHVHCTSSVRVYPICSDEVNKIEENPI 87

Query: 61  ANIEPESSGVSVLDTSKEQIDTTNDEPIADPPVKRRKRHRRKHFPDESFLMRGVYFKNMK 120
           ANIEPESSGVSVLDTSKEQIDTTN EPIADPPVKRRKRHRRKHFPDESFLMRGVYFKNMK
Sbjct: 88  ANIEPESSGVSVLDTSKEQIDTTNGEPIADPPVKRRKRHRRKHFPDESFLMRGVYFKNMK 147

Query: 121 WQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEFLA 180
           WQAAIKVDKKQIHLGTV SQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEFLA
Sbjct: 148 WQAAIKVDKKQIHLGTVASQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEFLA 207

Query: 181 MTRNTITNRKQKRLSPESKKSELSSPGNDDSNKR 207
           MTRNTITNRKQKRL+PESKKSELSSPGNDDSNKR
Sbjct: 208 MTRNTITNRKQKRLNPESKKSELSSPGNDDSNKR 241

[Close]
BLAST of CSPI03G27670 vs. ExPASy TrEMBL
Match: A0A5A7VNB7 (Ethylene-responsive transcription factor-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold238G00250 PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 2.3e-104
Identity = 199/214 (92.99%), Postives = 201/214 (93.93%), Query Frame = 0 

Query: 1   MVSLRRRKLLGLYS--------VLKFSENLTAEDHVHCTSFVRVYPICSDKVNKIEENPT 60
           MVSLRRRKLLGLYS        VLKFSENLTAE HVHCTS VRVYPICSD+VNKIEENP 
Sbjct: 1   MVSLRRRKLLGLYSGKASFVAPVLKFSENLTAEVHVHCTSSVRVYPICSDEVNKIEENPI 60

Query: 61  ANIEPESSGVSVLDTSKEQIDTTNDEPIADPPVKRRKRHRRKHFPDESFLMRGVYFKNMK 120
           ANIEPESSGVSVLDTSKEQIDTTN EPIADPPVKRRKRHRRKHFPDESFLMRGVYFKNMK
Sbjct: 61  ANIEPESSGVSVLDTSKEQIDTTNGEPIADPPVKRRKRHRRKHFPDESFLMRGVYFKNMK 120

Query: 121 WQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEFLA 180
           WQAAIKVDKKQIHLGTV SQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEFLA
Sbjct: 121 WQAAIKVDKKQIHLGTVASQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEFLA 180

Query: 181 MTRNTITNRKQKRLSPESKKSELSSPGNDDSNKR 207
           MTRNTITNRKQKRL+PESKKSELSSPGNDDSNKR
Sbjct: 181 MTRNTITNRKQKRLNPESKKSELSSPGNDDSNKR 214

[Close]
BLAST of CSPI03G27670 vs. ExPASy TrEMBL
Match: A0A1S3CCT4 (ethylene-responsive transcription factor-like protein At4g13040 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499216 PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 2.3e-104
Identity = 199/214 (92.99%), Postives = 201/214 (93.93%), Query Frame = 0 

Query: 1   MVSLRRRKLLGLYS--------VLKFSENLTAEDHVHCTSFVRVYPICSDKVNKIEENPT 60
           MVSLRRRKLLGLYS        VLKFSENLTAE HVHCTS VRVYPICSD+VNKIEENP 
Sbjct: 28  MVSLRRRKLLGLYSGKASFVAPVLKFSENLTAEVHVHCTSSVRVYPICSDEVNKIEENPI 87

Query: 61  ANIEPESSGVSVLDTSKEQIDTTNDEPIADPPVKRRKRHRRKHFPDESFLMRGVYFKNMK 120
           ANIEPESSGVSVLDTSKEQIDTTN EPIADPPVKRRKRHRRKHFPDESFLMRGVYFKNMK
Sbjct: 88  ANIEPESSGVSVLDTSKEQIDTTNGEPIADPPVKRRKRHRRKHFPDESFLMRGVYFKNMK 147

Query: 121 WQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEFLA 180
           WQAAIKVDKKQIHLGTV SQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEFLA
Sbjct: 148 WQAAIKVDKKQIHLGTVASQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEFLA 207

Query: 181 MTRNTITNRKQKRLSPESKKSELSSPGNDDSNKR 207
           MTRNTITNRKQKRL+PESKKSELSSPGNDDSNKR
Sbjct: 208 MTRNTITNRKQKRLNPESKKSELSSPGNDDSNKR 241

[Close]
BLAST of CSPI03G27670 vs. NCBI nr
Match: XP_031738473.1 (ethylene-responsive transcription factor-like protein At4g13040 isoform X2 [Cucumis sativus])

HSP 1 Score: 453.0 bits (1164), Expect = 1.5e-123
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0 

Query: 1   MVSLRRRKLLGLYSVLKFSENLTAEDHVHCTSFVRVYPICSDKVNKIEENPTANIEPESS 60
           MVSLRRRKLLGLYSVLKFSENLTAEDHVHCTSFVRVYPICSDKVNKIEENPTANIEPESS
Sbjct: 1   MVSLRRRKLLGLYSVLKFSENLTAEDHVHCTSFVRVYPICSDKVNKIEENPTANIEPESS 60

Query: 61  GVSVLDTSKEQIDTTNDEPIADPPVKRRKRHRRKHFPDESFLMRGVYFKNMKWQAAIKVD 120
           GVSVLDTSKEQIDTTNDEPIADPPVKRRKRHRRKHFPDESFLMRGVYFKNMKWQAAIKVD
Sbjct: 61  GVSVLDTSKEQIDTTNDEPIADPPVKRRKRHRRKHFPDESFLMRGVYFKNMKWQAAIKVD 120

Query: 121 KKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEFLAMTRNTITN 180
           KKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEFLAMTRNTITN
Sbjct: 121 KKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEFLAMTRNTITN 180

Query: 181 RKQKRLSPESKKSELSSPGNDDSNKRHDKFIDPSFLEDVEPVASTS 227
           RKQKRLSPESKKSELSSPGNDDSNKRHDKFIDPSFLEDVEPVASTS
Sbjct: 181 RKQKRLSPESKKSELSSPGNDDSNKRHDKFIDPSFLEDVEPVASTS 226

[Close]
BLAST of CSPI03G27670 vs. NCBI nr
Match: XP_011651656.1 (ethylene-responsive transcription factor-like protein At4g13040 isoform X1 [Cucumis sativus])

HSP 1 Score: 445.7 bits (1145), Expect = 2.5e-121
Identity = 226/234 (96.58%), Postives = 226/234 (96.58%), Query Frame = 0 

Query: 1   MVSLRRRKLLGLYS--------VLKFSENLTAEDHVHCTSFVRVYPICSDKVNKIEENPT 60
           MVSLRRRKLLGLYS        VLKFSENLTAEDHVHCTSFVRVYPICSDKVNKIEENPT
Sbjct: 1   MVSLRRRKLLGLYSGKASFVAPVLKFSENLTAEDHVHCTSFVRVYPICSDKVNKIEENPT 60

Query: 61  ANIEPESSGVSVLDTSKEQIDTTNDEPIADPPVKRRKRHRRKHFPDESFLMRGVYFKNMK 120
           ANIEPESSGVSVLDTSKEQIDTTNDEPIADPPVKRRKRHRRKHFPDESFLMRGVYFKNMK
Sbjct: 61  ANIEPESSGVSVLDTSKEQIDTTNDEPIADPPVKRRKRHRRKHFPDESFLMRGVYFKNMK 120

Query: 121 WQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEFLA 180
           WQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEFLA
Sbjct: 121 WQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEFLA 180

Query: 181 MTRNTITNRKQKRLSPESKKSELSSPGNDDSNKRHDKFIDPSFLEDVEPVASTS 227
           MTRNTITNRKQKRLSPESKKSELSSPGNDDSNKRHDKFIDPSFLEDVEPVASTS
Sbjct: 181 MTRNTITNRKQKRLSPESKKSELSSPGNDDSNKRHDKFIDPSFLEDVEPVASTS 234

[Close]
BLAST of CSPI03G27670 vs. NCBI nr
Match: XP_038887390.1 (ethylene-responsive transcription factor-like protein At4g13040 isoform X1 [Benincasa hispida] >XP_038887391.1 ethylene-responsive transcription factor-like protein At4g13040 isoform X1 [Benincasa hispida])

HSP 1 Score: 403.7 bits (1036), Expect = 1.1e-108
Identity = 208/237 (87.76%), Postives = 219/237 (92.41%), Query Frame = 0 

Query: 1   MVSLRRRKLLGLYS--------VLKFSENLTAEDHVHCTSFVRVYPICSDKVNKIEENPT 60
           MVSLRRRKLLGL +        VLKFSENLTAEDHVHCT+FV VYPICSD+VNKI+ENP 
Sbjct: 1   MVSLRRRKLLGLCTGKGSFVAPVLKFSENLTAEDHVHCTNFVSVYPICSDQVNKIKENPI 60

Query: 61  ANIEPESSGVSVLDTSKEQIDTTNDEPI-ADPPVKRRKRHRRKHFPDESFLMRGVYFKNM 120
           ANIEPESSGVSVLDTS+EQ DTTNDEPI ADPP+KRRKRHRRKHFPDESFLMRGVYFKNM
Sbjct: 61  ANIEPESSGVSVLDTSREQNDTTNDEPIAADPPIKRRKRHRRKHFPDESFLMRGVYFKNM 120

Query: 121 KWQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEFL 180
           KWQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEK+ELRKFNWDEFL
Sbjct: 121 KWQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKKELRKFNWDEFL 180

Query: 181 AMTRNTITNRKQKRLSPESKKSELSSPGN--DDSNKRHDKFIDPSFLEDVEPVASTS 227
           AMTR+ ITNRKQKRLSPES KS+LSSPGN  DDSNKRHD+FIDPS LED+EPVASTS
Sbjct: 181 AMTRHAITNRKQKRLSPESNKSKLSSPGNDDDDSNKRHDEFIDPSALEDMEPVASTS 237

[Close]
BLAST of CSPI03G27670 vs. NCBI nr
Match: XP_008460375.1 (PREDICTED: ethylene-responsive transcription factor-like protein At4g13040 isoform X1 [Cucumis melo] >XP_016902531.1 PREDICTED: ethylene-responsive transcription factor-like protein At4g13040 isoform X1 [Cucumis melo])

HSP 1 Score: 388.3 bits (996), Expect = 4.7e-104
Identity = 199/214 (92.99%), Postives = 201/214 (93.93%), Query Frame = 0 

Query: 1   MVSLRRRKLLGLYS--------VLKFSENLTAEDHVHCTSFVRVYPICSDKVNKIEENPT 60
           MVSLRRRKLLGLYS        VLKFSENLTAE HVHCTS VRVYPICSD+VNKIEENP 
Sbjct: 28  MVSLRRRKLLGLYSGKASFVAPVLKFSENLTAEVHVHCTSSVRVYPICSDEVNKIEENPI 87

Query: 61  ANIEPESSGVSVLDTSKEQIDTTNDEPIADPPVKRRKRHRRKHFPDESFLMRGVYFKNMK 120
           ANIEPESSGVSVLDTSKEQIDTTN EPIADPPVKRRKRHRRKHFPDESFLMRGVYFKNMK
Sbjct: 88  ANIEPESSGVSVLDTSKEQIDTTNGEPIADPPVKRRKRHRRKHFPDESFLMRGVYFKNMK 147

Query: 121 WQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEFLA 180
           WQAAIKVDKKQIHLGTV SQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEFLA
Sbjct: 148 WQAAIKVDKKQIHLGTVASQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEFLA 207

Query: 181 MTRNTITNRKQKRLSPESKKSELSSPGNDDSNKR 207
           MTRNTITNRKQKRL+PESKKSELSSPGNDDSNKR
Sbjct: 208 MTRNTITNRKQKRLNPESKKSELSSPGNDDSNKR 241

[Close]
BLAST of CSPI03G27670 vs. NCBI nr
Match: XP_008460380.1 (PREDICTED: ethylene-responsive transcription factor-like protein At4g13040 isoform X6 [Cucumis melo] >XP_008460381.1 PREDICTED: ethylene-responsive transcription factor-like protein At4g13040 isoform X6 [Cucumis melo] >XP_016902532.1 PREDICTED: ethylene-responsive transcription factor-like protein At4g13040 isoform X6 [Cucumis melo] >KAA0068076.1 ethylene-responsive transcription factor-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 388.3 bits (996), Expect = 4.7e-104
Identity = 199/214 (92.99%), Postives = 201/214 (93.93%), Query Frame = 0 

Query: 1   MVSLRRRKLLGLYS--------VLKFSENLTAEDHVHCTSFVRVYPICSDKVNKIEENPT 60
           MVSLRRRKLLGLYS        VLKFSENLTAE HVHCTS VRVYPICSD+VNKIEENP 
Sbjct: 1   MVSLRRRKLLGLYSGKASFVAPVLKFSENLTAEVHVHCTSSVRVYPICSDEVNKIEENPI 60

Query: 61  ANIEPESSGVSVLDTSKEQIDTTNDEPIADPPVKRRKRHRRKHFPDESFLMRGVYFKNMK 120
           ANIEPESSGVSVLDTSKEQIDTTN EPIADPPVKRRKRHRRKHFPDESFLMRGVYFKNMK
Sbjct: 61  ANIEPESSGVSVLDTSKEQIDTTNGEPIADPPVKRRKRHRRKHFPDESFLMRGVYFKNMK 120

Query: 121 WQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEFLA 180
           WQAAIKVDKKQIHLGTV SQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEFLA
Sbjct: 121 WQAAIKVDKKQIHLGTVASQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEFLA 180

Query: 181 MTRNTITNRKQKRLSPESKKSELSSPGNDDSNKR 207
           MTRNTITNRKQKRL+PESKKSELSSPGNDDSNKR
Sbjct: 181 MTRNTITNRKQKRLNPESKKSELSSPGNDDSNKR 214

[Close]
BLAST of CSPI03G27670 vs. TAIR 10
Match: AT4G13040.2 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 150.6 bits (379), Expect = 1.5e-36
Identity = 81/129 (62.79%), Postives = 96/129 (74.42%), Query Frame = 0 

Query: 80  IADPPVKRRKRHRRKHFPD-ESFLMRGVYFKNMKWQAAIKVDKKQIHLGTVGSQEEAAHL 139
           I+D P KRRK+HRRK   + E  LMRGVY+KNMKWQAAIKV+KKQIHLGT  SQEEAA L
Sbjct: 37  ISDQPPKRRKQHRRKRVHNQEPCLMRGVYYKNMKWQAAIKVEKKQIHLGTFSSQEEAARL 96

Query: 140 YDRAAFMCGREPNFELPEEEKQELRKFNWDEFLAMTRNTITNRKQK-RLSPESKKSELSS 199
           YDRAAFMCGREPNFEL EE  +EL++ +W+EFL  TR TITN+K K R+  E  K   S 
Sbjct: 97  YDRAAFMCGREPNFELSEEVIRELKQQSWEEFLNCTRRTITNKKPKSRIEHEDTKINASM 156

Query: 200 PGNDDSNKR 207
           P   +  ++
Sbjct: 157 PHQPEEEEQ 165

[Close]
BLAST of CSPI03G27670 vs. TAIR 10
Match: AT4G13040.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 147.1 bits (370), Expect = 1.7e-35
Identity = 103/226 (45.58%), Postives = 128/226 (56.64%), Query Frame = 0 

Query: 1   MVSLRRRKLLGL-------YSVLKFSENLTAEDHVHCTSFVRVYPICSDKVNKIEENPTA 60
           MVSLRRR+LLGL        + L F   LTAE+ +  T         +      E   T 
Sbjct: 1   MVSLRRRRLLGLCCGPNGYVTPLPF---LTAEEMI--TGIPNPNARAAYNPGPAETVTTV 60

Query: 61  NIEPESSGVSVLDTSKEQIDTTNDEPIADP-----------PVKRRKRHRRKHFPD-ESF 120
            +E ++       T  + +   +D     P           P KRRK+HRRK   + E  
Sbjct: 61  IVEKKAIEERSRRTRSKHMHFRSDYSDISPVNSDSISPKYQPPKRRKQHRRKRVHNQEPC 120

Query: 121 LMRGVYFKNMKWQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKQE 180
           LMRGVY+KNMKWQAAIKV+KKQIHLGT  SQEEAA LYDRAAFMCGREPNFEL EE  +E
Sbjct: 121 LMRGVYYKNMKWQAAIKVEKKQIHLGTFSSQEEAARLYDRAAFMCGREPNFELSEEVIRE 180

Query: 181 LRKFNWDEFLAMTRNTITNRKQK-RLSPESKKSELSSPGNDDSNKR 207
           L++ +W+EFL  TR TITN+K K R+  E  K   S P   +  ++
Sbjct: 181 LKQQSWEEFLNCTRRTITNKKPKSRIEHEDTKINASMPHQPEEEEQ 221

[Close]
BLAST of CSPI03G27670 vs. TAIR 10
Match: AT4G13040.3 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 147.1 bits (370), Expect = 1.7e-35
Identity = 103/226 (45.58%), Postives = 128/226 (56.64%), Query Frame = 0 

Query: 1   MVSLRRRKLLGL-------YSVLKFSENLTAEDHVHCTSFVRVYPICSDKVNKIEENPTA 60
           MVSLRRR+LLGL        + L F   LTAE+ +  T         +      E   T 
Sbjct: 21  MVSLRRRRLLGLCCGPNGYVTPLPF---LTAEEMI--TGIPNPNARAAYNPGPAETVTTV 80

Query: 61  NIEPESSGVSVLDTSKEQIDTTNDEPIADP-----------PVKRRKRHRRKHFPD-ESF 120
            +E ++       T  + +   +D     P           P KRRK+HRRK   + E  
Sbjct: 81  IVEKKAIEERSRRTRSKHMHFRSDYSDISPVNSDSISPKYQPPKRRKQHRRKRVHNQEPC 140

Query: 121 LMRGVYFKNMKWQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKQE 180
           LMRGVY+KNMKWQAAIKV+KKQIHLGT  SQEEAA LYDRAAFMCGREPNFEL EE  +E
Sbjct: 141 LMRGVYYKNMKWQAAIKVEKKQIHLGTFSSQEEAARLYDRAAFMCGREPNFELSEEVIRE 200

Query: 181 LRKFNWDEFLAMTRNTITNRKQK-RLSPESKKSELSSPGNDDSNKR 207
           L++ +W+EFL  TR TITN+K K R+  E  K   S P   +  ++
Sbjct: 201 LKQQSWEEFLNCTRRTITNKKPKSRIEHEDTKINASMPHQPEEEEQ 241

The following BLAST results are available for this feature:
BLAST of CSPI03G27670 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q56XP92.4e-3445.58Ethylene-responsive transcription factor-like protein At4g13040 OS=Arabidopsis t... [more]
BLAST of CSPI03G27670 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LCE71.2e-12196.58AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G630280 PE=... [more]
A0A1S4E2T22.3e-10492.99ethylene-responsive transcription factor-like protein At4g13040 isoform X6 OS=Cu... [more]
A0A1S3CCB82.3e-10492.99ethylene-responsive transcription factor-like protein At4g13040 isoform X1 OS=Cu... [more]
A0A5A7VNB72.3e-10492.99Ethylene-responsive transcription factor-like protein OS=Cucumis melo var. makuw... [more]
A0A1S3CCT42.3e-10492.99ethylene-responsive transcription factor-like protein At4g13040 isoform X2 OS=Cu... [more]
BLAST of CSPI03G27670 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_031738473.11.5e-123100.00ethylene-responsive transcription factor-like protein At4g13040 isoform X2 [Cucu... [more]
XP_011651656.12.5e-12196.58ethylene-responsive transcription factor-like protein At4g13040 isoform X1 [Cucu... [more]
XP_038887390.11.1e-10887.76ethylene-responsive transcription factor-like protein At4g13040 isoform X1 [Beni... [more]
XP_008460375.14.7e-10492.99PREDICTED: ethylene-responsive transcription factor-like protein At4g13040 isofo... [more]
XP_008460380.14.7e-10492.99PREDICTED: ethylene-responsive transcription factor-like protein At4g13040 isofo... [more]
BLAST of CSPI03G27670 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G13040.21.5e-3662.79Integrase-type DNA-binding superfamily protein [more]
AT4G13040.11.7e-3545.58Integrase-type DNA-binding superfamily protein [more]
AT4G13040.31.7e-3545.58Integrase-type DNA-binding superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 102..161
e-value: 4.8E-4
score: 21.0
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 104..145
e-value: 6.4E-5
score: 23.1
IPR036955AP2/ERF domain superfamilyGENE3D3.30.730.10AP2/ERF domaincoord: 104..154
e-value: 5.5E-8
score: 34.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 69..93
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 182..215
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 178..226
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 71..85
NoneNo IPR availablePANTHERPTHR32467AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTORcoord: 1..215
NoneNo IPR availablePANTHERPTHR32467:SF4OS02G0499000 PROTEINcoord: 1..215
IPR016177DNA-binding domain superfamilySUPERFAMILY54171DNA-binding domaincoord: 103..147

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G27670.1CSPI03G27670.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 DNA-binding transcription factor activity