CSPI03G26460 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI03G26460
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionDUF1985 domain-containing protein
LocationChr3: 23857522 .. 23857914 (+)
RNA-Seq ExpressionCSPI03G26460
SyntenyCSPI03G26460
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGGAAGTATGTTCCATGATACTGAAAACAAAAATTTTGAAAAAGGAGAATGCTCTAAAGAATCTGAGGGTATTAACACTCAAATTCCTGAGTATTTCCTAAAATTCCAGGAAATTATGTTGAAAAACAATGAAAAATTAAATAAGAAGCTAGACAAACTCATTGGGAAGGTTGAAGAGATTAAAATAAAAATTACTAATAGAAGTAGTTCAAAGACGGAAGAAGAAAATTGGGAAGATAGAGATGAGGATCGAGATGGAGGAAATGGGAAAAGAAATGACAGATTGGCAGACGATGGAGAAGATGGTAATACTGAAAATCTAAATATAGATGAAAAATGGGAGAGAACTACAATAATAAATAGTGAAAATGAAGCTGCAAGGGTATGA

mRNA sequence

ATGGAAGGAAGTATGTTCCATGATACTGAAAACAAAAATTTTGAAAAAGGAGAATGCTCTAAAGAATCTGAGGGTATTAACACTCAAATTCCTGAGTATTTCCTAAAATTCCAGGAAATTATGTTGAAAAACAATGAAAAATTAAATAAGAAGCTAGACAAACTCATTGGGAAGGTTGAAGAGATTAAAATAAAAATTACTAATAGAAGTAGTTCAAAGACGGAAGAAGAAAATTGGGAAGATAGAGATGAGGATCGAGATGGAGGAAATGGGAAAAGAAATGACAGATTGGCAGACGATGGAGAAGATGGTAATACTGAAAATCTAAATATAGATGAAAAATGGGAGAGAACTACAATAATAAATAGTGAAAATGAAGCTGCAAGGGTATGA

Coding sequence (CDS)

ATGGAAGGAAGTATGTTCCATGATACTGAAAACAAAAATTTTGAAAAAGGAGAATGCTCTAAAGAATCTGAGGGTATTAACACTCAAATTCCTGAGTATTTCCTAAAATTCCAGGAAATTATGTTGAAAAACAATGAAAAATTAAATAAGAAGCTAGACAAACTCATTGGGAAGGTTGAAGAGATTAAAATAAAAATTACTAATAGAAGTAGTTCAAAGACGGAAGAAGAAAATTGGGAAGATAGAGATGAGGATCGAGATGGAGGAAATGGGAAAAGAAATGACAGATTGGCAGACGATGGAGAAGATGGTAATACTGAAAATCTAAATATAGATGAAAAATGGGAGAGAACTACAATAATAAATAGTGAAAATGAAGCTGCAAGGGTATGA

Protein sequence

MEGSMFHDTENKNFEKGECSKESEGINTQIPEYFLKFQEIMLKNNEKLNKKLDKLIGKVEEIKIKITNRSSSKTEEENWEDRDEDRDGGNGKRNDRLADDGEDGNTENLNIDEKWERTTIINSENEAARV*
Homology
BLAST of CSPI03G26460 vs. ExPASy TrEMBL
Match: A0A0A0L8U3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G603550 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 3.2e-63
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0

Query: 1   MEGSMFHDTENKNFEKGECSKESEGINTQIPEYFLKFQEIMLKNNEKLNKKLDKLIGKVE 60
           MEGSMFHDTENKNFEKGECSKESEGINTQIPEYFLKFQEIMLKNNEKLNKKLDKLIGKVE
Sbjct: 1   MEGSMFHDTENKNFEKGECSKESEGINTQIPEYFLKFQEIMLKNNEKLNKKLDKLIGKVE 60

Query: 61  EIKIKITNRSSSKTEEENWEDRDEDRDGGNGKRNDRLADDGEDGNTENLNIDEKWERTTI 120
           EIKIKITNRSSSKTEEENWEDRDEDRDGGNGKRNDRLADDGEDGNTENLNIDEKWERTTI
Sbjct: 61  EIKIKITNRSSSKTEEENWEDRDEDRDGGNGKRNDRLADDGEDGNTENLNIDEKWERTTI 120

Query: 121 INSENEAARV 131
           INSENEAARV
Sbjct: 121 INSENEAARV 130

BLAST of CSPI03G26460 vs. ExPASy TrEMBL
Match: A0A0A0LXM6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G639010 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.8e-42
Identity = 93/121 (76.86%), Postives = 110/121 (90.91%), Query Frame = 0

Query: 9   TENKNFEKGECSKESEGINTQIPEYFLKFQEIMLKNNEKLNKKLDKLIGKVEEIKIKITN 68
           T  +NFEKGECSKESEGINTQIPEY+L FQ+IML NNE+LNKKLDKLIG+VEEIK K+TN
Sbjct: 4   TSTRNFEKGECSKESEGINTQIPEYYLTFQKIMLTNNEELNKKLDKLIGEVEEIKNKLTN 63

Query: 69  RSSSKTEEENWEDRDEDRDGGNGKRNDRLADDGEDGNTENLNIDEKWERTTIINSENEAA 128
           RSS  TEEENW++ DEDRDGGNG+R+DRL ++GEDGNTEN+ +DE+ +RTTI+NSENEAA
Sbjct: 64  RSSLMTEEENWKEMDEDRDGGNGERDDRLVNEGEDGNTENIKMDEEGDRTTIVNSENEAA 123

Query: 129 R 130
           R
Sbjct: 124 R 124

BLAST of CSPI03G26460 vs. ExPASy TrEMBL
Match: A0A0A0K3Z3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G284410 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 1.5e-15
Identity = 60/129 (46.51%), Postives = 69/129 (53.49%), Query Frame = 0

Query: 1   MEGSMFHDTENKNFEKGECSKESEGINTQIPEYFLKFQEIMLKNNEKLNKKLDKLIGKVE 60
           MEG+MFH TE KNFEKGE SKES  INTQI E                            
Sbjct: 50  MEGNMFHGTETKNFEKGEYSKESARINTQIHE---------------------------- 109

Query: 61  EIKIKITNRSSSKTEEENWEDRDEDRDGGNGKRNDRLADDGEDGNTENLNIDEKWERTTI 120
                                 DEDRDGGNG+R+D L DDGED NTEN+N+DE+ ++TTI
Sbjct: 110 ----------------------DEDRDGGNGERDDGLVDDGEDCNTENINMDEEGDKTTI 128

Query: 121 INSENEAAR 130
           +NSENEAAR
Sbjct: 170 VNSENEAAR 128

BLAST of CSPI03G26460 vs. ExPASy TrEMBL
Match: A0A0A0KHB6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G191010 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 7.3e-15
Identity = 44/57 (77.19%), Postives = 53/57 (92.98%), Query Frame = 0

Query: 74  TEEENWEDRDEDRDGGNGKRNDRLADDGEDGNTENLNIDEKWERTTIINSENEAARV 131
           TEEENWED+DEDRDG NG+R+DRL DDGEDGNTEN+N+DEK ++TTI+NSENEAA +
Sbjct: 2   TEEENWEDKDEDRDGENGERDDRLLDDGEDGNTENINMDEKGDKTTIVNSENEAAMI 58

BLAST of CSPI03G26460 vs. ExPASy TrEMBL
Match: A0A5D3DQK4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G00170 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 2.9e-11
Identity = 43/94 (45.74%), Postives = 62/94 (65.96%), Query Frame = 0

Query: 1   MEGSMFHDTE-----NKNFEKGECSKESEGINTQIPEYFLKFQEIMLKNNEKLNKKLDKL 60
           +E S FH+T+     N+ FE+GECS++ E  N ++P+YFLKFQE+M+ NN+ LN KLDKL
Sbjct: 106 VERSTFHETKMREETNERFERGECSRQPEKSNEEVPKYFLKFQEVMMANNQSLNIKLDKL 165

Query: 61  IGKVEEIKIKITNRSSSKTEEENWEDRDEDRDGG 90
           I +VE +K  +  +     E     +RDE+ DGG
Sbjct: 166 ILEVEGLKNMLKEKERKTVENNETIERDENNDGG 199

BLAST of CSPI03G26460 vs. NCBI nr
Match: KAE8650805.1 (hypothetical protein Csa_017412 [Cucumis sativus])

HSP 1 Score: 248.8 bits (634), Expect = 2.5e-62
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0

Query: 1   MEGSMFHDTENKNFEKGECSKESEGINTQIPEYFLKFQEIMLKNNEKLNKKLDKLIGKVE 60
           MEGSMFHDTENKNFEKGECSKESEGINTQIPEYFLKFQEIMLKNNEKLNKKLDKLIGKVE
Sbjct: 64  MEGSMFHDTENKNFEKGECSKESEGINTQIPEYFLKFQEIMLKNNEKLNKKLDKLIGKVE 123

Query: 61  EIKIKITNRSSSKTEEENWEDRDEDRDGGNGKRNDRLADDGEDGNTENLNIDEKWERTTI 120
           EIKIKITNRSSSKTEEENWEDRDEDRDGGNGKRNDRLADDGEDGNTENLNIDEKWERTTI
Sbjct: 124 EIKIKITNRSSSKTEEENWEDRDEDRDGGNGKRNDRLADDGEDGNTENLNIDEKWERTTI 183

Query: 121 INSENEAAR 130
           INSENEAAR
Sbjct: 184 INSENEAAR 192

BLAST of CSPI03G26460 vs. NCBI nr
Match: KAE8653550.1 (hypothetical protein Csa_006898, partial [Cucumis sativus])

HSP 1 Score: 184.1 bits (466), Expect = 7.7e-43
Identity = 94/121 (77.69%), Postives = 111/121 (91.74%), Query Frame = 0

Query: 9   TENKNFEKGECSKESEGINTQIPEYFLKFQEIMLKNNEKLNKKLDKLIGKVEEIKIKITN 68
           T  +NFEKGECSKESEGINTQIPEY+L FQ+IML NNE+LNKKLDKLIG+VEEIK K+TN
Sbjct: 4   TSTRNFEKGECSKESEGINTQIPEYYLTFQKIMLTNNEELNKKLDKLIGEVEEIKNKLTN 63

Query: 69  RSSSKTEEENWEDRDEDRDGGNGKRNDRLADDGEDGNTENLNIDEKWERTTIINSENEAA 128
           RSS  TEEENW++ DEDRDGGNG+R+DRL ++GEDGNTEN+N+DE+ +RTTI+NSENEAA
Sbjct: 64  RSSLMTEEENWKEMDEDRDGGNGERDDRLVNEGEDGNTENINMDEEGDRTTIVNSENEAA 123

Query: 129 R 130
           R
Sbjct: 124 R 124

BLAST of CSPI03G26460 vs. NCBI nr
Match: TYK25812.1 (uncharacterized protein E5676_scaffold436G00170 [Cucumis melo var. makuwa])

HSP 1 Score: 78.2 bits (191), Expect = 5.9e-11
Identity = 43/94 (45.74%), Postives = 62/94 (65.96%), Query Frame = 0

Query: 1   MEGSMFHDTE-----NKNFEKGECSKESEGINTQIPEYFLKFQEIMLKNNEKLNKKLDKL 60
           +E S FH+T+     N+ FE+GECS++ E  N ++P+YFLKFQE+M+ NN+ LN KLDKL
Sbjct: 106 VERSTFHETKMREETNERFERGECSRQPEKSNEEVPKYFLKFQEVMMANNQSLNIKLDKL 165

Query: 61  IGKVEEIKIKITNRSSSKTEEENWEDRDEDRDGG 90
           I +VE +K  +  +     E     +RDE+ DGG
Sbjct: 166 ILEVEGLKNMLKEKERKTVENNETIERDENNDGG 199

BLAST of CSPI03G26460 vs. NCBI nr
Match: KAA0047364.1 (transposase [Cucumis melo var. makuwa] >TYK14041.1 transposase [Cucumis melo var. makuwa])

HSP 1 Score: 73.2 bits (178), Expect = 1.9e-09
Identity = 43/100 (43.00%), Postives = 67/100 (67.00%), Query Frame = 0

Query: 1   MEGSMFHDTE-----NKNFEKGECSKESEGINTQIPEYFLKFQEIMLKNNEKLNKKLDKL 60
           +E SMFH+ +     +K F+KGECS++++  N ++P+YFLKFQE+++ NN+ LN KLDKL
Sbjct: 315 VERSMFHERQSTKETHKRFKKGECSRQAKHTNVEVPKYFLKFQELIMANNQALNVKLDKL 374

Query: 61  IGKVEEIKIKITNRSSSKTEEENWEDRDEDRDGGNGKRND 96
           + K+E +K  +  + S+  E      RDE+ DG  G RN+
Sbjct: 375 LLKIEGLKNLLKEKESATVEPNENIQRDEN-DGDQGDRNN 413

BLAST of CSPI03G26460 vs. NCBI nr
Match: KAA0055985.1 (uncharacterized protein E6C27_scaffold319G001240 [Cucumis melo var. makuwa])

HSP 1 Score: 70.5 bits (171), Expect = 1.2e-08
Identity = 54/139 (38.85%), Postives = 81/139 (58.27%), Query Frame = 0

Query: 4   SMFHDTE-----NKNFEKGECSKESEGINTQIPEYFLKFQEIMLKNNEKLNKKLDKLIGK 63
           S FH+T+     N+ F+KGECS+++E  N ++ EYFLKF E+++ NN+ LN KLDKLI +
Sbjct: 145 STFHETKSREETNERFKKGECSQQAELSNKEVAEYFLKFPELIMINNQALNMKLDKLILE 204

Query: 64  VEEIK--IKITNRSSSKTEEENWEDRDEDRDGGNGKRND----RLADDGE-DGNTENLNI 123
           VE +K  +K   R + +  E    D + + DGG G RN+     + D GE DG + N + 
Sbjct: 205 VEGLKDMLKEKERETVELNETIQRDENNENDGGEGHRNNGEEMGMRDKGEQDGKSGNESE 264

Query: 124 DEKWERTTIINSENEAARV 131
            +  +R     +ENE   V
Sbjct: 265 GKNDQRDGNNETENEGQEV 283

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0L8U33.2e-63100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G603550 PE=4 SV=1[more]
A0A0A0LXM61.8e-4276.86Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G639010 PE=4 SV=1[more]
A0A0A0K3Z31.5e-1546.51Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G284410 PE=4 SV=1[more]
A0A0A0KHB67.3e-1577.19Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G191010 PE=4 SV=1[more]
A0A5D3DQK42.9e-1145.74Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
KAE8650805.12.5e-62100.00hypothetical protein Csa_017412 [Cucumis sativus][more]
KAE8653550.17.7e-4377.69hypothetical protein Csa_006898, partial [Cucumis sativus][more]
TYK25812.15.9e-1145.74uncharacterized protein E5676_scaffold436G00170 [Cucumis melo var. makuwa][more]
KAA0047364.11.9e-0943.00transposase [Cucumis melo var. makuwa] >TYK14041.1 transposase [Cucumis melo var... [more]
KAA0055985.11.2e-0838.85uncharacterized protein E6C27_scaffold319G001240 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 45..65
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 65..114

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G26460.1CSPI03G26460.1mRNA