Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAGCGTCTCGCAGCAAATAAAGGAGAATGGTGGAATGCCGATTCTCTACCCGATGTTAACTCCACACAACTACACGGTGTGGACGATAAAGGCAGAAGAGGAGCCAGCGAGAGGAGCCGAAGTGGATGTGAAGAAAGACAAGAAGGCGGGTGCATACATTCTCCAATGCATCCTGGAAGACGTGCTTCTACAAATCACAAAGAAGAAGACCGCAAAGGAAATATGGGATAGTTTCAAGACAAGGTACTTGGGCAGTGAGCAGGTGCAGATGGTGAGAGTTCAAACCTTGAAGAGTGAGTTTAATGTTTTTCGGATGAAGGAAACTGAGACGATTGATGAGTTCGCAAGAAAAATCAGCGGATTAGCAAGCAAGTTCACCACCCTCGGAGTTGCACTTGAGGATTCATCATTGGTCAAAAAGCTCCTCGATTCCGTCCCCGACAAATATCTTTCCATTGTCACCGAAATCGAGCAATTCCAAGATCTCGAAACCATGTCGTTTGAAGAAGCAATTGGACGAATGATGGCGTACGAGGAACGAACAACACGACTCTGA
mRNA sequence
ATGGCAAGCGTCTCGCAGCAAATAAAGGAGAATGGTGGAATGCCGATTCTCTACCCGATGTTAACTCCACACAACTACACGGTGTGGACGATAAAGGCAGAAGAGGAGCCAGCGAGAGGAGCCGAAGTGGATGTGAAGAAAGACAAGAAGGCGGGTGCATACATTCTCCAATGCATCCTGGAAGACGTGCTTCTACAAATCACAAAGAAGAAGACCGCAAAGGAAATATGGGATAGTTTCAAGACAAGGTACTTGGGCAGTGAGCAGGTGCAGATGGTGAGAGTTCAAACCTTGAAGAGTGAGTTTAATGTTTTTCGGATGAAGGAAACTGAGACGATTGATGAGTTCGCAAGAAAAATCAGCGGATTAGCAAGCAAGTTCACCACCCTCGGAGTTGCACTTGAGGATTCATCATTGGTCAAAAAGCTCCTCGATTCCGTCCCCGACAAATATCTTTCCATTGTCACCGAAATCGAGCAATTCCAAGATCTCGAAACCATGTCGTTTGAAGAAGCAATTGGACGAATGATGGCGTACGAGGAACGAACAACACGACTCTGA
Coding sequence (CDS)
ATGGCAAGCGTCTCGCAGCAAATAAAGGAGAATGGTGGAATGCCGATTCTCTACCCGATGTTAACTCCACACAACTACACGGTGTGGACGATAAAGGCAGAAGAGGAGCCAGCGAGAGGAGCCGAAGTGGATGTGAAGAAAGACAAGAAGGCGGGTGCATACATTCTCCAATGCATCCTGGAAGACGTGCTTCTACAAATCACAAAGAAGAAGACCGCAAAGGAAATATGGGATAGTTTCAAGACAAGGTACTTGGGCAGTGAGCAGGTGCAGATGGTGAGAGTTCAAACCTTGAAGAGTGAGTTTAATGTTTTTCGGATGAAGGAAACTGAGACGATTGATGAGTTCGCAAGAAAAATCAGCGGATTAGCAAGCAAGTTCACCACCCTCGGAGTTGCACTTGAGGATTCATCATTGGTCAAAAAGCTCCTCGATTCCGTCCCCGACAAATATCTTTCCATTGTCACCGAAATCGAGCAATTCCAAGATCTCGAAACCATGTCGTTTGAAGAAGCAATTGGACGAATGATGGCGTACGAGGAACGAACAACACGACTCTGA
Protein sequence
MASVSQQIKENGGMPILYPMLTPHNYTVWTIKAEEEPARGAEVDVKKDKKAGAYILQCILEDVLLQITKKKTAKEIWDSFKTRYLGSEQVQMVRVQTLKSEFNVFRMKETETIDEFARKISGLASKFTTLGVALEDSSLVKKLLDSVPDKYLSIVTEIEQFQDLETMSFEEAIGRMMAYEERTTRL*
Homology
BLAST of CSPI03G24300 vs. ExPASy TrEMBL
Match:
Q0JH75 (Os01g0879800 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0879800 PE=4 SV=1)
HSP 1 Score: 199.5 bits (506), Expect = 1.2e-47
Identity = 105/191 (54.97%), Postives = 135/191 (70.68%), Query Frame = 0
Query: 3 SVSQQIKENGGMPILYPMLTPHNYTVWTIKAEE-----------EPARGAEVDVKKDKKA 62
S S+ ++E G + + YP+LT NY+ W IK E EPA VD+KKDK+A
Sbjct: 16 SASRSMRE-GIVSLPYPVLTSTNYSTWAIKMEANMEAQGIWDAIEPAADEAVDIKKDKQA 75
Query: 63 GAYILQCILEDVLLQITKKKTAKEIWDSFKTRYLGSEQVQMVRVQTLKSEFNVFRMKETE 122
A + + EDVL QI KKKTAKE+W+S KTR+LG E+V+ RVQTLKS+F MK+TE
Sbjct: 76 RACLFGAVPEDVLQQIAKKKTAKEVWESLKTRFLGVERVKKARVQTLKSDFKALHMKDTE 135
Query: 123 TIDEFARKISGLASKFTTLGVALEDSSLVKKLLDSVPDKYLSIVTEIEQFQDLETMSFEE 182
+IDEFA KISGLA+K + LGV ++D VKKLLDSVPDK+L ++ IEQF DL++M F+E
Sbjct: 136 SIDEFAGKISGLANKLSDLGVTMDDDEQVKKLLDSVPDKFLHVIAAIEQFSDLDSMPFDE 195
BLAST of CSPI03G24300 vs. ExPASy TrEMBL
Match:
Q2QUP7 (Laccase OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os12g15530 PE=3 SV=1)
HSP 1 Score: 199.5 bits (506), Expect = 1.2e-47
Identity = 105/191 (54.97%), Postives = 135/191 (70.68%), Query Frame = 0
Query: 3 SVSQQIKENGGMPILYPMLTPHNYTVWTIKAEE-----------EPARGAEVDVKKDKKA 62
S S+ ++E G + + YP+LT NY+ W IK E EPA VD+KKDK+A
Sbjct: 429 SASRSMRE-GIVSLPYPVLTSTNYSTWAIKMEANMEAQGIWDAIEPAADEAVDIKKDKQA 488
Query: 63 GAYILQCILEDVLLQITKKKTAKEIWDSFKTRYLGSEQVQMVRVQTLKSEFNVFRMKETE 122
A + + EDVL QI KKKTAKE+W+S KTR+LG E+V+ RVQTLKS+F MK+TE
Sbjct: 489 RACLFGAVPEDVLQQIAKKKTAKEVWESLKTRFLGVERVKKARVQTLKSDFKALHMKDTE 548
Query: 123 TIDEFARKISGLASKFTTLGVALEDSSLVKKLLDSVPDKYLSIVTEIEQFQDLETMSFEE 182
+IDEFA KISGLA+K + LGV ++D VKKLLDSVPDK+L ++ IEQF DL++M F+E
Sbjct: 549 SIDEFAGKISGLANKLSDLGVTMDDDEQVKKLLDSVPDKFLHVIAAIEQFSDLDSMPFDE 608
BLAST of CSPI03G24300 vs. ExPASy TrEMBL
Match:
A0A5N6NYJ8 (CCHC-type domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_16352 PE=4 SV=1)
HSP 1 Score: 198.4 bits (503), Expect = 2.7e-47
Identity = 99/193 (51.30%), Postives = 134/193 (69.43%), Query Frame = 0
Query: 1 MASVSQQIKENGGMPILYPMLTPHNYTVWTIKAEE-----------EPARGAEVDVKKDK 60
+A+ S K+ + + P LT NYT W IK E EP GA VD KK+K
Sbjct: 412 VATTSATPKDPSSVSLQIPSLTATNYTTWAIKMEAVMDAQGLWESIEPTPGAAVDEKKNK 471
Query: 61 KAGAYILQCILEDVLLQITKKKTAKEIWDSFKTRYLGSEQVQMVRVQTLKSEFNVFRMKE 120
+ A+I Q I EDVLLQ+ KKKTAKEIWDS K RY+G+++VQ R+ TLK+EF + +MKE
Sbjct: 472 TSRAFIFQAIPEDVLLQVAKKKTAKEIWDSLKIRYMGADRVQKARLHTLKNEFELLKMKE 531
Query: 121 TETIDEFARKISGLASKFTTLGVALEDSSLVKKLLDSVPDKYLSIVTEIEQFQDLETMSF 180
E++DEFA K++G+ +K+ +LG ++D LV+KLLDSVPDKYL +V IEQ+ D++TM F
Sbjct: 532 GESVDEFAGKLAGMVTKYNSLGYTIKDEDLVRKLLDSVPDKYLQLVASIEQYSDIDTMPF 591
Query: 181 EEAIGRMMAYEER 183
+EAIGR+ AYE+R
Sbjct: 592 DEAIGRLKAYEDR 604
BLAST of CSPI03G24300 vs. ExPASy TrEMBL
Match:
A0A5N6MA89 (Uncharacterized protein OS=Mikania micrantha OX=192012 GN=E3N88_33044 PE=3 SV=1)
HSP 1 Score: 196.1 bits (497), Expect = 1.4e-46
Identity = 101/185 (54.59%), Postives = 130/185 (70.27%), Query Frame = 0
Query: 9 KENGGMPILYPMLTPHNYTVWTIKAEE-----------EPARGAEVDVKKDKKAGAYILQ 68
KE G + + P LT NYT W+IK E E +G VD KK K A A++ Q
Sbjct: 596 KEAGSVSLQIPNLTSTNYTTWSIKMEAIMDAQGLWESIETPQGLAVDEKKSKTARAFLFQ 655
Query: 69 CILEDVLLQITKKKTAKEIWDSFKTRYLGSEQVQMVRVQTLKSEFNVFRMKETETIDEFA 128
I EDVLLQ+ KKKTAKE+W+S K RYLG+++VQ R+ TLKSEF+ RM+ETE+IDE+A
Sbjct: 656 AIPEDVLLQVAKKKTAKEVWESLKLRYLGADRVQKARLNTLKSEFDALRMRETESIDEYA 715
Query: 129 RKISGLASKFTTLGVALEDSSLVKKLLDSVPDKYLSIVTEIEQFQDLETMSFEEAIGRMM 183
K+S + SK ++LG LEDS +V+KLLD+VPDKYL +V IEQ DL+TM FEEA+GR+
Sbjct: 716 GKLSAMISKHSSLGQTLEDSMVVRKLLDTVPDKYLQLVASIEQTADLDTMPFEEAVGRLK 775
BLAST of CSPI03G24300 vs. ExPASy TrEMBL
Match:
A0A5N6M0G6 (Uncharacterized protein OS=Mikania micrantha OX=192012 GN=E3N88_34946 PE=4 SV=1)
HSP 1 Score: 194.9 bits (494), Expect = 3.0e-46
Identity = 100/193 (51.81%), Postives = 133/193 (68.91%), Query Frame = 0
Query: 1 MASVSQQIKENGGMPILYPMLTPHNYTVWTIKAEE-----------EPARGAEVDVKKDK 60
+A+ SQ KE G + + P LT NYT W IK E EP GA VD +K+K
Sbjct: 3 VATTSQAPKEAGSVSLQIPTLTATNYTTWAIKMEAVMDAQGLWECVEPVAGATVDERKNK 62
Query: 61 KAGAYILQCILEDVLLQITKKKTAKEIWDSFKTRYLGSEQVQMVRVQTLKSEFNVFRMKE 120
A A+I Q I EDVL+Q+ KKKTA EIW+S K RY+G+++VQ R+ TLK+EF + +MKE
Sbjct: 63 TARAFIFQAIPEDVLMQVAKKKTAMEIWESLKARYVGADRVQKARLNTLKTEFELLKMKE 122
Query: 121 TETIDEFARKISGLASKFTTLGVALEDSSLVKKLLDSVPDKYLSIVTEIEQFQDLETMSF 180
E+IDEFA K+S + +K+ +LG LED LV KLLDSVP+K+L +V IEQ+ D+++M F
Sbjct: 123 GESIDEFAGKLSSMVAKYNSLGSTLEDKVLVGKLLDSVPEKFLQLVASIEQYSDVDSMPF 182
Query: 181 EEAIGRMMAYEER 183
EEAIGR+ AYE+R
Sbjct: 183 EEAIGRLKAYEDR 195
BLAST of CSPI03G24300 vs. NCBI nr
Match:
XP_031745073.1 (uncharacterized protein LOC116405251 [Cucumis sativus])
HSP 1 Score: 309.3 bits (791), Expect = 2.3e-80
Identity = 165/197 (83.76%), Postives = 168/197 (85.28%), Query Frame = 0
Query: 1 MASVSQQIKENGGMPILYPMLTPHNYTVWTIKAEE-----------EPARGAEVDVKKDK 60
M S SQQ KENGGMPILYPMLTPHNYTVWTIKAE EPARGAEVDVKKDK
Sbjct: 1 MTSTSQQTKENGGMPILYPMLTPHNYTVWTIKAEAILDAQGVWEAIEPARGAEVDVKKDK 60
Query: 61 KAGAYILQCILEDVLLQITKKKTAKEIWDSFKTRYLGSEQVQMVRVQTLKSEFNVFRMKE 120
KA AYILQCI EDVLLQI KKKTAKEIWDS KTRYLGSE+V+M RVQTLK EFNV RMKE
Sbjct: 61 KACAYILQCIPEDVLLQIAKKKTAKEIWDSLKTRYLGSERVKMARVQTLKREFNVLRMKE 120
Query: 121 TETIDEFARKISGLASKFTTLGVALEDSSLVKKLLDSVPDKYLSIVTEIEQFQDLETMSF 180
TE IDEFA KISGLASKFTTLGVAL+DSSLVKKLLDSVPDKYL IV IEQFQDLETM F
Sbjct: 121 TEMIDEFAGKISGLASKFTTLGVALKDSSLVKKLLDSVPDKYLPIVAGIEQFQDLETMPF 180
Query: 181 EEAIGRMMAYEERTTRL 187
EEAIGRM AYEERTTRL
Sbjct: 181 EEAIGRMKAYEERTTRL 197
BLAST of CSPI03G24300 vs. NCBI nr
Match:
XP_031737549.1 (uncharacterized protein LOC116402439 [Cucumis sativus])
HSP 1 Score: 308.9 bits (790), Expect = 3.0e-80
Identity = 165/197 (83.76%), Postives = 170/197 (86.29%), Query Frame = 0
Query: 1 MASVSQQIKENGGMPILYPMLTPHNYTVWTIKAEE-----------EPARGAEVDVKKDK 60
MAS+SQQ KENGGM ILY MLTPHNYTVWTIKAE EPARGAEVDVKKDK
Sbjct: 1 MASISQQTKENGGMSILYSMLTPHNYTVWTIKAEAILDAQGVREAIEPARGAEVDVKKDK 60
Query: 61 KAGAYILQCILEDVLLQITKKKTAKEIWDSFKTRYLGSEQVQMVRVQTLKSEFNVFRMKE 120
KA +YILQCI EDVLLQI KKKTAKEIWDS KTRYLGSE+V+M RVQTLKSEF+V RMKE
Sbjct: 61 KARSYILQCIPEDVLLQIAKKKTAKEIWDSLKTRYLGSERVKMARVQTLKSEFSVLRMKE 120
Query: 121 TETIDEFARKISGLASKFTTLGVALEDSSLVKKLLDSVPDKYLSIVTEIEQFQDLETMSF 180
TETIDEFA KISGLASKFTTLGVALEDSSLVKKLLDSVPDKYL IV IEQFQDLETM F
Sbjct: 121 TETIDEFAGKISGLASKFTTLGVALEDSSLVKKLLDSVPDKYLPIVVGIEQFQDLETMPF 180
Query: 181 EEAIGRMMAYEERTTRL 187
EEAIGRM AYEERTTRL
Sbjct: 181 EEAIGRMKAYEERTTRL 197
BLAST of CSPI03G24300 vs. NCBI nr
Match:
XP_011658449.1 (uncharacterized protein LOC105436008 [Cucumis sativus])
HSP 1 Score: 295.0 bits (754), Expect = 4.4e-76
Identity = 157/197 (79.70%), Postives = 163/197 (82.74%), Query Frame = 0
Query: 1 MASVSQQIKENGGMPILYPMLTPHNYTVWTIKAEE-----------EPARGAEVDVKKDK 60
MASVSQQ KENG MPI YPML PHNYT+WTIK E EP RG EVDVKKDK
Sbjct: 1 MASVSQQTKENGRMPIFYPMLCPHNYTMWTIKTEAILDTQEVWEAIEPIRGLEVDVKKDK 60
Query: 61 KAGAYILQCILEDVLLQITKKKTAKEIWDSFKTRYLGSEQVQMVRVQTLKSEFNVFRMKE 120
KA YILQCILEDVLLQI KKK+AKEIWD+ KTRYLGSE+V+M RV LKSEFNV RMKE
Sbjct: 61 KACVYILQCILEDVLLQIAKKKSAKEIWDNLKTRYLGSERVKMARVGILKSEFNVLRMKE 120
Query: 121 TETIDEFARKISGLASKFTTLGVALEDSSLVKKLLDSVPDKYLSIVTEIEQFQDLETMSF 180
TETIDEFA KIS LASKFTTLGVALEDSSLVKKLLDSVPDKYL IVT IEQFQDLETM F
Sbjct: 121 TETIDEFAGKISKLASKFTTLGVALEDSSLVKKLLDSVPDKYLLIVTRIEQFQDLETMPF 180
Query: 181 EEAIGRMMAYEERTTRL 187
EE IGRMM YEERTT+L
Sbjct: 181 EETIGRMMVYEERTTQL 197
BLAST of CSPI03G24300 vs. NCBI nr
Match:
XP_031741713.1 (uncharacterized protein LOC116403908 [Cucumis sativus])
HSP 1 Score: 280.4 bits (716), Expect = 1.1e-71
Identity = 151/183 (82.51%), Postives = 154/183 (84.15%), Query Frame = 0
Query: 14 MPILYPMLTPHNYTVWTIKAEE-----------EPARGAEVDVKKDKKAGAYILQCILED 73
M ILYPMLTPHNYTVWTIKAE EPARGAEVDVKKDKKA AYILQCI ED
Sbjct: 1 MSILYPMLTPHNYTVWTIKAEAILNAQGVWEAIEPARGAEVDVKKDKKARAYILQCIPED 60
Query: 74 VLLQITKKKTAKEIWDSFKTRYLGSEQVQMVRVQTLKSEFNVFRMKETETIDEFARKISG 133
VLLQI KKKTAKEIWDS KTRYLGSE+V+M RVQTLKSEFNV RMKE ETIDEF KISG
Sbjct: 61 VLLQIAKKKTAKEIWDSLKTRYLGSERVKMARVQTLKSEFNVLRMKEIETIDEFVGKISG 120
Query: 134 LASKFTTLGVALEDSSLVKKLLDSVPDKYLSIVTEIEQFQDLETMSFEEAIGRMMAYEER 186
LASKFTTL VALEDSSLV KLLDSVPDKYL IV I+QFQDLETM FEEAIGRM AYEER
Sbjct: 121 LASKFTTLRVALEDSSLVNKLLDSVPDKYLPIVVGIKQFQDLETMPFEEAIGRMKAYEER 180
BLAST of CSPI03G24300 vs. NCBI nr
Match:
XP_042450925.1 (uncharacterized protein LOC122035851 [Zingiber officinale])
HSP 1 Score: 260.8 bits (665), Expect = 9.2e-66
Identity = 134/189 (70.90%), Postives = 148/189 (78.31%), Query Frame = 0
Query: 9 KENGGMPILYPMLTPHNYTVWTIKAEE-----------EPARGAEVDVKKDKKAGAYILQ 68
KENGG+ YPML PHNYTVW IK E EPA GA+VD KKDKKA AYILQ
Sbjct: 10 KENGGVSFPYPMLNPHNYTVWAIKTEAILDAQGVWETVEPAEGAQVDAKKDKKARAYILQ 69
Query: 69 CILEDVLLQITKKKTAKEIWDSFKTRYLGSEQVQMVRVQTLKSEFNVFRMKETETIDEFA 128
C+ ED+LLQI KKTAKE+WDS KTRYLGS++V+ RVQTLKSEF+ RMKETETIDEFA
Sbjct: 70 CVPEDILLQIANKKTAKEVWDSLKTRYLGSDRVKKARVQTLKSEFDALRMKETETIDEFA 129
Query: 129 RKISGLASKFTTLGVALEDSSLVKKLLDSVPDKYLSIVTEIEQFQDLETMSFEEAIGRMM 187
K+S L+SKF+TLG LEDSSLVKKLLDSVPDK+ IV IEQF DLETM FEEAIGR+
Sbjct: 130 GKLSALSSKFSTLGATLEDSSLVKKLLDSVPDKFFPIVAGIEQFHDLETMPFEEAIGRLK 189
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Q0JH75 | 1.2e-47 | 54.97 | Os01g0879800 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0879800 PE... | [more] |
Q2QUP7 | 1.2e-47 | 54.97 | Laccase OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os12g15530 PE=3 SV=1 | [more] |
A0A5N6NYJ8 | 2.7e-47 | 51.30 | CCHC-type domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_1635... | [more] |
A0A5N6MA89 | 1.4e-46 | 54.59 | Uncharacterized protein OS=Mikania micrantha OX=192012 GN=E3N88_33044 PE=3 SV=1 | [more] |
A0A5N6M0G6 | 3.0e-46 | 51.81 | Uncharacterized protein OS=Mikania micrantha OX=192012 GN=E3N88_34946 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |