CSPI03G24160 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G24160
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Unknown protein
Location	Chr3: 21273141 .. 21273965 (+)
RNA-Seq Expression	CSPI03G24160
Synteny	CSPI03G24160

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGAATTTATGATATTTTGACTAAAGAAAAGACAAAGCAAATGCAACCCATTAAACATCTCTCCCATGTGAGTTAGAAAAAGAGAACCCTCTTTTTAGGGTTACCACAAAAACAGAAACCCCTTTTGTGAATATAAAATAGAATAATGAGTATTGACCTTTCTCACTTTTTTTCACATTGAACATTGTTATTAATACCCCCAACTCCAAACTCCCCTTCCTCCCTCCCCAACCCAAAACAATCAAACCCATAATGGATTTGAGTTGTATGCGGTGGTCCAGCAGCCGTGTGTATGTGGCAGCCGGCGTCTTGAGGTGCAGGGCGGCGCCGACGCCGGAGATGAAGAAGAAGATGATGATGGGGAGATGGAGAATGGTGTGGAGAAGGATTAAGAAGAGAATCATAATGTCATGGAGGTGCAGAGCACATGAGATGCGGGTGCAGGGGTACGATCGAGAGAGTTATCTACAGAATTTTGATGATGGGTTTACAATGATGATGATGATGGGAGCCACTGGTGAGGATTCTGACGTCATTTCTCGATCTTTCTCTGCTCGTTTCGCCATTTCTCGCCCTTTGTCCTCTTAGCAGCTTTCTCTTTTCCTCTTTTTTCTTCTTACCAACTCTGTTGTGTTAGCTGCTCGTGAGGGCTAAAGCCAAGATTGTAAATAACTTTTTTCTATTCTCGAGAGGATGAGTATATCTCAACTGTGCTCGTAATTAATTAAAAACTGAGAGGTTGCTCGTAACCAATAAAATTGTTGAAAATATTTTTACCAAATATAGTGAAATTTTAAATTATATTATATCTCTATTATATTTTAT

mRNA sequence

TAGAATTTATGATATTTTGACTAAAGAAAAGACAAAGCAAATGCAACCCATTAAACATCTCTCCCATGTGAGTTAGAAAAAGAGAACCCTCTTTTTAGGGTTACCACAAAAACAGAAACCCCTTTTGTGAATATAAAATAGAATAATGAGTATTGACCTTTCTCACTTTTTTTCACATTGAACATTGTTATTAATACCCCCAACTCCAAACTCCCCTTCCTCCCTCCCCAACCCAAAACAATCAAACCCATAATGGATTTGAGTTGTATGCGGTGGTCCAGCAGCCGTGTGTATGTGGCAGCCGGCGTCTTGAGGTGCAGGGCGGCGCCGACGCCGGAGATGAAGAAGAAGATGATGATGGGGAGATGGAGAATGGTGTGGAGAAGGATTAAGAAGAGAATCATAATGTCATGGAGGTGCAGAGCACATGAGATGCGGGTGCAGGGGTACGATCGAGAGAGTTATCTACAGAATTTTGATGATGGGTTTACAATGATGATGATGATGGGAGCCACTGGTGAGGATTCTGACGTCATTTCTCGATCTTTCTCTGCTCGTTTCGCCATTTCTCGCCCTTTGTCCTCTTAGCAGCTTTCTCTTTTCCTCTTTTTTCTTCTTACCAACTCTGTTGTGTTAGCTGCTCGTGAGGGCTAAAGCCAAGATTGTAAATAACTTTTTTCTATTCTCGAGAGGATGAGTATATCTCAACTGTGCTCGTAATTAATTAAAAACTGAGAGGTTGCTCGTAACCAATAAAATTGTTGAAAATATTTTTACCAAATATAGTGAAATTTTAAATTATATTATATCTCTATTATATTTTAT

Coding sequence (CDS)

ATGGATTTGAGTTGTATGCGGTGGTCCAGCAGCCGTGTGTATGTGGCAGCCGGCGTCTTGAGGTGCAGGGCGGCGCCGACGCCGGAGATGAAGAAGAAGATGATGATGGGGAGATGGAGAATGGTGTGGAGAAGGATTAAGAAGAGAATCATAATGTCATGGAGGTGCAGAGCACATGAGATGCGGGTGCAGGGGTACGATCGAGAGAGTTATCTACAGAATTTTGATGATGGGTTTACAATGATGATGATGATGGGAGCCACTGGTGAGGATTCTGACGTCATTTCTCGATCTTTCTCTGCTCGTTTCGCCATTTCTCGCCCTTTGTCCTCTTAG

Protein sequence

MDLSCMRWSSSRVYVAAGVLRCRAAPTPEMKKKMMMGRWRMVWRRIKKRIIMSWRCRAHEMRVQGYDRESYLQNFDDGFTMMMMMGATGEDSDVISRSFSARFAISRPLSS*

Homology

[Close]

BLAST of CSPI03G24160 vs. ExPASy TrEMBL
Match: A0A0A0LAV8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G481240 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 1.1e-46
Identity = 96/97 (98.97%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 15  VAAGVLRCRAAPTPEMKKKMMMGRWRMVWRRIKKRIIMSWRCRAHEMRVQGYDRESYLQN 74
           V+AGVLRCRAAPTPEMKKKMMMGRWRMVWRRIKKRIIMSWRCRAHEMRVQGYDRESYLQN
Sbjct: 19  VSAGVLRCRAAPTPEMKKKMMMGRWRMVWRRIKKRIIMSWRCRAHEMRVQGYDRESYLQN 78

Query: 75  FDDGFTMMMMMGATGEDSDVISRSFSARFAISRPLSS 112
           FDDGFTMMMMMGATGEDSDVISRSFSARFAISRPLSS
Sbjct: 79  FDDGFTMMMMMGATGEDSDVISRSFSARFAISRPLSS 115

[Close]

BLAST of CSPI03G24160 vs. ExPASy TrEMBL
Match: A0A5D3CB48 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold323G001140 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 8.2e-15
Identity = 46/48 (95.83%), Postives = 46/48 (95.83%), Query Frame = 0


Query: 65  GYDRESYLQNFDDGFT-MMMMMGATGEDSDVISRSFSARFAISRPLSS 112
           GYDRESYLQNFDDGFT MMMMMGA GEDSDVISRSFSARFAISRPLSS
Sbjct: 689 GYDRESYLQNFDDGFTMMMMMMGAIGEDSDVISRSFSARFAISRPLSS 736

[Close]

BLAST of CSPI03G24160 vs. ExPASy TrEMBL
Match: A0A151SHL2 (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_000386 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 6.5e-04
Identity = 35/78 (44.87%), Postives = 44/78 (56.41%), Query Frame = 0


Query: 29  EMKKKMMMGRWRMVWRRIK--KRIIMSWRCRAHEMRVQGYDRESYLQNFDDGFTMMMMMG 88
           E   ++ MG W+ +WR+IK  +R   S     H   VQ YD  SYLQNFDDG++      
Sbjct: 34  EFVARLKMGSWKTLWRKIKRERRRFFSPSPVFHHFHVQ-YDPTSYLQNFDDGYS------ 93

Query: 89  ATGEDSDVISRSFSARFA 105
               D D +SRSFSARFA
Sbjct: 94  ---TDPDNVSRSFSARFA 101

[Close]

BLAST of CSPI03G24160 vs. NCBI nr
Match: KGN58151.2 (hypothetical protein Csa_023395 [Cucumis sativus])

HSP 1 Score: 226.5 bits (576), Expect = 1.2e-55
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 1   MDLSCMRWSSSRVYVAAGVLRCRAAPTPEMKKKMMMGRWRMVWRRIKKRIIMSWRCRAHE 60
           MDLSCMRWSSSRVYVAAGVLRCRAAPTPEMKKKMMMGRWRMVWRRIKKRIIMSWRCRAHE
Sbjct: 1   MDLSCMRWSSSRVYVAAGVLRCRAAPTPEMKKKMMMGRWRMVWRRIKKRIIMSWRCRAHE 60

Query: 61  MRVQGYDRESYLQNFDDGFTMMMMMGATGEDSDVISRSFSARFAISRPLSS 112
           MRVQGYDRESYLQNFDDGFTMMMMMGATGEDSDVISRSFSARFAISRPLSS
Sbjct: 61  MRVQGYDRESYLQNFDDGFTMMMMMGATGEDSDVISRSFSARFAISRPLSS 111

[Close]

BLAST of CSPI03G24160 vs. NCBI nr
Match: TYK08570.1 (uncharacterized protein E5676_scaffold323G001140 [Cucumis melo var. makuwa])

HSP 1 Score: 89.7 bits (221), Expect = 1.7e-14
Identity = 46/48 (95.83%), Postives = 46/48 (95.83%), Query Frame = 0


Query: 65  GYDRESYLQNFDDGFT-MMMMMGATGEDSDVISRSFSARFAISRPLSS 112
           GYDRESYLQNFDDGFT MMMMMGA GEDSDVISRSFSARFAISRPLSS
Sbjct: 689 GYDRESYLQNFDDGFTMMMMMMGAIGEDSDVISRSFSARFAISRPLSS 736

[Close]

BLAST of CSPI03G24160 vs. NCBI nr
Match: KAG7036482.1 (hypothetical protein SDJN02_00099, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 68.6 bits (166), Expect = 4.0e-08
Identity = 50/110 (45.45%), Postives = 66/110 (60.00%), Query Frame = 0


Query: 1   MDLSCMRWSSSRV-YVAAGVLRCRAAPTPEMKKKMMMGRWRMVWRRIKKRIIMSWRC--- 60
           M+LSC+R +   + YV  G     +A T  + +K    RWR+VWRR+KK     +RC   
Sbjct: 1   MNLSCLRGAGGGIGYVERGYY---SAVTVAVLEK-TTARWRVVWRRLKKEKKRMFRCGMS 60

Query: 61  RAHEMRVQGYDRESYLQNFDDGFTMMMMMGATGEDSDVISRSFSARFAIS 107
            A E+ V  Y+ ++YLQNFDDG  MM+      +D D ISRSFSARFAIS
Sbjct: 61  GAREVHVP-YNPKTYLQNFDDGSVMMV----GDDDPDAISRSFSARFAIS 101

[Close]

BLAST of CSPI03G24160 vs. NCBI nr
Match: KAG6606769.1 (hypothetical protein SDJN03_00111, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 68.6 bits (166), Expect = 4.0e-08
Identity = 50/110 (45.45%), Postives = 66/110 (60.00%), Query Frame = 0


Query: 1   MDLSCMRWSSSRV-YVAAGVLRCRAAPTPEMKKKMMMGRWRMVWRRIKKRIIMSWRC--- 60
           M+LSC+R +   + YV  G     +A T  + +K    RWR+VWRR+KK     +RC   
Sbjct: 1   MNLSCLRGAGGGIGYVERGYY---SAVTVAVLEK-TTSRWRVVWRRLKKEKKRMFRCGMS 60

Query: 61  RAHEMRVQGYDRESYLQNFDDGFTMMMMMGATGEDSDVISRSFSARFAIS 107
            A E+ V  Y+ ++YLQNFDDG  MM+      +D D ISRSFSARFAIS
Sbjct: 61  GAREVHVP-YNPKTYLQNFDDGSVMMV----GDDDPDAISRSFSARFAIS 101

The following BLAST results are available for this feature:

BLAST of CSPI03G24160 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI03G24160 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LAV8	1.1e-46	98.97	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G481240 PE=4 SV=1	[more]
A0A5D3CB48	8.2e-15	95.83	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A151SHL2	6.5e-04	44.87	Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_000386 PE=4 SV=1	[more]

BLAST of CSPI03G24160 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN58151.2	1.2e-55	100.00	hypothetical protein Csa_023395 [Cucumis sativus]	[more]
TYK08570.1	1.7e-14	95.83	uncharacterized protein E5676_scaffold323G001140 [Cucumis melo var. makuwa]	[more]
KAG7036482.1	4.0e-08	45.45	hypothetical protein SDJN02_00099, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6606769.1	4.0e-08	45.45	hypothetical protein SDJN03_00111, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CSPI03G24160 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33168	STRESS INDUCED PROTEIN-RELATED	coord: 27..109
None	No IPR available	PANTHER	PTHR33168:SF70	OS01G0182300 PROTEIN	coord: 27..109

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G24160.1	CSPI03G24160.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043086	negative regulation of catalytic activity
molecular_function	GO:0004857	enzyme inhibitor activity