Homology
BLAST of CSPI03G23910 vs. ExPASy Swiss-Prot
Match:
P14381 (Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1)
HSP 1 Score: 108.2 bits (269), Expect = 2.3e-22
Identity = 70/254 (27.56%), Postives = 124/254 (48.82%), Query Frame = 0
Query: 170 QAKLIGLNQEELNSRAALQAELL-SIYQNEERNFIQKSKLNWLSSGDENTGFFHRFLNAK 229
+ +L G + L + E L ++ Q + R +S++ L D + FF+ K
Sbjct: 323 EQRLSGSEDQALQCEYLERKEALRNMEQRQARGAFVRSRMQLLCDMDRGSRFFYALEKKK 382
Query: 230 KRRNLITELKNDDGVVSTSFRDIERLVLEFFESLYTRIP--GDRFIPINSNWSCVSSIQN 289
R IT L +DG I F+++L++ P D + VS +
Sbjct: 383 GNRKQITCLFAEDGTPLEDPEAIRDRARSFYQNLFSPDPISPDACEELWDGLPVVSERRK 442
Query: 290 EALVTQFSVEEIFKALKALGNNKAPSPDGFTVKFLITQWSIFKDIFKSLMSDFHRNGRLN 349
E L T +++E+ +AL+ + +NK+P DG T++F W F ++++ + G L
Sbjct: 443 ERLETPITLDELSQALRLMPHNKSPGLDGLTIEFFQFFWDTLGPDFHRVLTEAFKKGELP 502
Query: 350 ACIQENFICLVQKKENVTLVKDFRPISLTTLAYKVVAKVLSERLKQVMDAIISPTQSAFI 409
+ + L+ KK ++ L+K++RP+SL + YK+VAK +S RLK V+ +I P QS +
Sbjct: 503 LSCRRAVLSLLPKKGDLRLIKNWRPVSLLSTDYKIVAKAISLRLKSVLAEVIHPDQSYTV 562
Query: 410 EGRQILDPILIANE 421
GR I D + + +
Sbjct: 563 PGRTIFDNVFLIRD 576
BLAST of CSPI03G23910 vs. ExPASy Swiss-Prot
Match:
P11369 (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2)
HSP 1 Score: 80.9 bits (198), Expect = 4.0e-14
Identity = 55/194 (28.35%), Postives = 98/194 (50.52%), Query Frame = 0
Query: 223 RFLNAKKRRNLITELKNDDGVVSTSFRDIERLVLEFFESLY-TRIPG----DRFIPINSN 282
R + + LI +++N+ G ++T +I+ + F++ LY T++ D+F+
Sbjct: 386 RLTKGHRDKILINKIRNEKGDITTDPEEIQNTIRSFYKRLYSTKLENLDEMDKFLD-RYQ 445
Query: 283 WSCVSSIQNEALVTQFSVEEIFKALKALGNNKAPSPDGFTVKFLITQWSIFKDIFKSLMS 342
++ Q + L + S +EI + +L K+P PDGF+ +F T I L
Sbjct: 446 VPKLNQDQVDHLNSPISPKEIEAVINSLPTKKSPGPDGFSAEFYQTFKEDLIPILHKLFH 505
Query: 343 DFHRNGRLNACIQENFICLVQK-KENVTLVKDFRPISLTTLAYKVVAKVLSERLKQVMDA 402
G L E I L+ K +++ T +++FRPISL + K++ K+L+ R+++ + A
Sbjct: 506 KIEVEGTLPNSFYEATITLIPKPQKDPTKIENFRPISLMNIDAKILNKILANRIQEHIKA 565
Query: 403 IISPTQSAFIEGRQ 411
II P Q FI G Q
Sbjct: 566 IIHPDQVGFIPGMQ 578
BLAST of CSPI03G23910 vs. ExPASy Swiss-Prot
Match:
O00370 (LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1)
HSP 1 Score: 77.0 bits (188), Expect = 5.8e-13
Identity = 63/246 (25.61%), Postives = 111/246 (45.12%), Query Frame = 0
Query: 178 QEELNSRAA-------LQAELLSIYQNEERNFIQKSKLNWLSSGDENTGFFHRFLNAKKR 237
QE+ +S+A+ ++AEL I + I +S+ + ++ R + K+
Sbjct: 327 QEQTHSKASRRQEITKIRAELKEIETQKTLQKINESRSWFFERINKIDRPLARLIKKKRE 386
Query: 238 RNLITELKNDDGVVSTSFRDIERLVLEFFESLYTR-----IPGDRFIPINSNWSCVSSIQ 297
+N I +KND G ++T +I+ + E+++ LY D F+ ++ +
Sbjct: 387 KNQIDTIKNDKGDITTDPTEIQTTIREYYKHLYANKLENLEEMDTFLD-TYTLPRLNQEE 446
Query: 298 NEALVTQFSVEEIFKALKALGNNKAPSPDGFTVKFLITQWSIFKDIFKSLMSDFHRNGRL 357
E+L + EI + +L K+P PDGFT +F L + G L
Sbjct: 447 VESLNRPITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSIEKEGIL 506
Query: 358 NACIQENFICLVQKK-ENVTLVKDFRPISLTTLAYKVVAKVLSERLKQVMDAIISPTQSA 411
E I L+ K + T ++FRPISL + K++ K+L+ R++Q + +I Q
Sbjct: 507 PNSFYEASIILIPKPGRDTTKKENFRPISLMNIDAKILNKILANRIQQHIKKLIHHDQVG 566
BLAST of CSPI03G23910 vs. ExPASy Swiss-Prot
Match:
P08548 (LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1)
HSP 1 Score: 73.9 bits (180), Expect = 4.9e-12
Identity = 60/230 (26.09%), Postives = 110/230 (47.83%), Query Frame = 0
Query: 187 LQAELLSIYQNEERNFIQKSKLNWLSSGDENTGFFHRFLNAKKRRNLITELKNDDGVVST 246
++AEL I I KSK + ++ K+ ++LI+ ++N + ++T
Sbjct: 342 IRAELNEIENKRIIQQINKSKSWFFEKINKIDKPLANLTRKKRVKSLISSIRNGNDEITT 401
Query: 247 SFRDIERLVLEFFESLYTR-----IPGDRFIPINSNWSCVSSIQNEALVTQFSVEEIFKA 306
+I++++ E+++ LY+ D+++ + +S + E L S EI
Sbjct: 402 DPSEIQKILNEYYKKLYSHKYENLKEIDQYLEA-CHLPRLSQKEVEMLNRPISSSEIAST 461
Query: 307 LKALGNNKAPSPDGFTVKFLITQWSIFKDIFKSLMSDFHRNGRLNACIQENFICLVQKK- 366
++ L K+P PDGFT +F T I +L + + G L E I L+ K
Sbjct: 462 IQNLPKKKSPGPDGFTSEFYQTFKEELVPILLNLFQNIEKEGILPNTFYEANITLIPKPG 521
Query: 367 ENVTLVKDFRPISLTTLAYKVVAKVLSERLKQVMDAIISPTQSAFIEGRQ 411
++ T +++RPISL + K++ K+L+ R++Q + II Q FI G Q
Sbjct: 522 KDPTRKENYRPISLMNIDAKILNKILTNRIQQHIKKIIHHDQVGFIPGSQ 570
BLAST of CSPI03G23910 vs. ExPASy TrEMBL
Match:
M5WPQ5 (Reverse transcriptase domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_ppa016677mg PE=4 SV=1)
HSP 1 Score: 273.5 bits (698), Expect = 1.5e-69
Identity = 158/459 (34.42%), Postives = 232/459 (50.54%), Query Frame = 0
Query: 28 ERKLVWPELSSLADCSSVAWCIGGDFNITRWARERFPFGRSTRGMSLFNKFIDM------ 87
ER W EL+ L WC+GGDFN+ R++ E+ GR T+ M FN FI
Sbjct: 384 ERNSFWEELADLYGYCGDKWCLGGDFNVVRFSAEKSNEGRVTKSMRDFNDFIQETNLRDP 443
Query: 88 ----------------------------MWDVCFENSRVSRKARIFSDHFPLFLEAGSFL 147
W+ F + R RI SDH P+ L++
Sbjct: 444 ILLNASFTWSNLRENAVCRRLDRFLVSGSWEEHFPHYRHKALPRITSDHCPIELDSSRVK 503
Query: 148 WGPSPFRFCNSWLVSSDSNQIIVETVSNSNFQGWAGFILHEQLRSVKLAVKAWN------ 207
WGPSPFRF N WL D + I GW G+ +L+ +K +K W+
Sbjct: 504 WGPSPFRFENMWLNHPDFKRKIKLWWGEDQIPGWEGYKFMTRLKMLKSKLKVWSKEEFGD 563
Query: 208 ------IAQAKLIGLNQEE---------LNSRAALQAELLSIYQNEERNFIQKSKLNWLS 267
A+A+L+ L+Q E + R L ++ + Q EE + Q+ K+ W
Sbjct: 564 VERDLREAEARLLVLDQREGTEGLDHLLRSERDNLLLKIGDLAQREEVKWRQRGKVKWAR 623
Query: 268 SGDENTGFFHRFLNAKKRRNLITELKNDDGVVSTSFRDIERLVLEFFESLYTRIPGDRFI 327
GD NT FFHR N ++RN I +L+ +D V +IER V+ FF+ LY+R +
Sbjct: 624 EGDGNTKFFHRVANGARKRNYIEKLEVEDLGVIEVDANIEREVIRFFKGLYSRNKNVGWG 683
Query: 328 PINSNWSCVSSIQNEALVTQFSVEEIFKALKALGNNKAPSPDGFTVKFLITQWSIFKDIF 387
NW +S ++ + L F +EE+ KA+ G +K+P PDGF++ F + W + K
Sbjct: 684 VEGLNWCPISQVEADWLERPFDLEEVQKAVFDCGKDKSPGPDGFSMSFFQSCWEVVKGDL 743
Query: 388 KSLMSDFHRNGRLNACIQENFICLVQKKENVTLVKDFRPISLTTLAYKVVAKVLSERLKQ 432
+M DF ++G +N E FICL+ KK N V D+RPISL T YKV++KVL+ RL++
Sbjct: 744 MKVMQDFFQSGIVNGVTNETFICLIPKKANSVKVTDYRPISLVTSLYKVISKVLASRLRE 803
BLAST of CSPI03G23910 vs. ExPASy TrEMBL
Match:
A5BCI7 (Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_029474 PE=4 SV=1)
HSP 1 Score: 268.9 bits (686), Expect = 3.8e-68
Identity = 154/453 (34.00%), Postives = 224/453 (49.45%), Query Frame = 0
Query: 29 RKLVWPELSSLADCSSVAWCIGGDFNITRWARERFPFGRSTRGMSLFNKFI--------- 88
RK W ELS +A +S WC+GGDFN+ R + E+ R T M F+ FI
Sbjct: 780 RKDFWVELSDIAGLASPRWCVGGDFNVIRRSSEKLGGSRXTPSMKXFDDFISDCELIDLP 839
Query: 89 -------------------------DMMWDVCFENSRVSRKARIFSDHFPLFLEAGSFLW 148
W+ F S R SDH+P+ LE F W
Sbjct: 840 LRSASFTWSNMQVNXVCKRLDRFLYSNEWEQAFPQSIQGVLPRWTSDHWPIVLETNPFKW 899
Query: 149 GPSPFRFCNSWLVSSDSNQIIVETVSNSNFQGWAGFILHEQLRSVKLAVKAWNIAQ---- 208
GP+PFRF N WL + GW G +L+ VK +K WN A
Sbjct: 900 GPTPFRFENMWLQHPSFKENFGRWWREFQGNGWEGHKFMRKLQFVKAKLKVWNKASFGEL 959
Query: 209 --------AKLI---------GLNQEELNSRAALQAELLSIYQNEERNFIQKSKLNWLSS 268
+ L+ GL+ E L RA + EL + EE ++ QK+++ W+
Sbjct: 960 SKRKEDILSDLVNFDSLEQEGGLSHELLAQRALKKGELEELILREEIHWRQKARVKWVKE 1019
Query: 269 GDENTGFFHRFLNAKKRRNLITELKNDDGVVSTSFRDIERLVLEFFESLYTRIPGDRFIP 328
GD N+ FFH+ N ++ R I EL+N++G++ + I+ +L +FE LYT G+ +
Sbjct: 1020 GDCNSRFFHKVANGRRNRKFIKELENENGLMMNNSESIKEEILRYFEKLYTSPSGESWRV 1079
Query: 329 INSNWSCVSSIQNEALVTQFSVEEIFKALKALGNNKAPSPDGFTVKFLITQWSIFKDIFK 388
+WS +S L + F+ EEIFKA+ + +KAP PDGFT+ W + K+
Sbjct: 1080 EGLDWSPISGESAFRLESPFTEEEIFKAIFQMDRDKAPGPDGFTIAVFQDCWEVIKEDLV 1139
Query: 389 SLMSDFHRNGRLNACIQENFICLVQKKENVTLVKDFRPISLTTLAYKVVAKVLSERLKQV 427
+ ++FHR+G +N +FI L+ KK + DFRPISL T YK++AKVL+ R++ V
Sbjct: 1140 KVFTEFHRSGIINQSTNASFIVLLPKKSMSRRISDFRPISLITSLYKIIAKVLAGRIRGV 1199
BLAST of CSPI03G23910 vs. ExPASy TrEMBL
Match:
M5VS59 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa016504mg PE=4 SV=1)
HSP 1 Score: 267.7 bits (683), Expect = 8.5e-68
Identity = 157/459 (34.20%), Postives = 229/459 (49.89%), Query Frame = 0
Query: 28 ERKLVWPELSSLADCSSVAWCIGGDFNITRWARERFPFGRSTRGMSLFNKFIDM------ 87
ER W EL+ L WC+GGDFN+ R++ E+ GR T+ M FN FI
Sbjct: 102 ERNSFWEELADLYGFCGDKWCLGGDFNVVRFSAEKSNEGRVTKSMRDFNDFIQETNLRDP 161
Query: 88 ----------------------------MWDVCFENSRVSRKARIFSDHFPLFLEAGSFL 147
W+ F + R RI SDH P+ L+
Sbjct: 162 NLLNASFTWSNLRENAVCRRLDRFLVSGSWEDHFPHYRHKALPRITSDHCPIELDTSRVK 221
Query: 148 WGPSPFRFCNSWLVSSDSNQIIVETVSNSNFQGWAGFILHEQLRSVKLAVKAWN------ 207
WGPSPFRF N WL D + I GW G+ +L+ +K +K W+
Sbjct: 222 WGPSPFRFENMWLNHPDFMRKIKLWWGEDQIPGWEGYKFMTRLKMLKSKLKVWSKEEFGD 281
Query: 208 ------IAQAKLIGLNQEE---------LNSRAALQAELLSIYQNEERNFIQKSKLNWLS 267
A+A+L+ L+Q E + R L ++ + Q EE + Q+ K+ W
Sbjct: 282 VERDLREAEARLLVLDQREGTEGLDHLLRSERDNLLLKIGDLAQKEEVKWRQRGKVKWAR 341
Query: 268 SGDENTGFFHRFLNAKKRRNLITELKNDDGVVSTSFRDIERLVLEFFESLYTRIPGDRFI 327
GD NT FFHR N ++RN I +L+ +D V +IER V+ FF+ LY+ +
Sbjct: 342 EGDGNTKFFHRVANGARKRNYIEKLEVEDLGVIEVDANIEREVIRFFKGLYSSNKNVGWG 401
Query: 328 PINSNWSCVSSIQNEALVTQFSVEEIFKALKALGNNKAPSPDGFTVKFLITQWSIFKDIF 387
NW +S ++ + L F +EE+ KA+ G +K+P PDGF++ F + W + K
Sbjct: 402 VEGLNWCPISQVEADWLERPFDLEEVQKAVFECGKDKSPGPDGFSMSFFQSCWEVVKGDL 461
Query: 388 KSLMSDFHRNGRLNACIQENFICLVQKKENVTLVKDFRPISLTTLAYKVVAKVLSERLKQ 432
+M DF ++G +N E FICL+ KK N V D RPISL T YKV++KVL+ RL++
Sbjct: 462 MKVMQDFFQSGIVNGVTNETFICLIPKKANSVKVTDNRPISLVTSLYKVISKVLASRLRE 521
BLAST of CSPI03G23910 vs. ExPASy TrEMBL
Match:
A0A5D3BJP3 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005410 PE=4 SV=1)
HSP 1 Score: 267.3 bits (682), Expect = 1.1e-67
Identity = 157/458 (34.28%), Postives = 224/458 (48.91%), Query Frame = 0
Query: 29 RKLVWPELSSLADCSSVAWCIGGDFNITRWARERFPFGRSTRGMSLFNKFI--------- 88
R L W EL +L W +GGDFN+ RW E ++ M FN FI
Sbjct: 45 RPLFWEELENLKSICFPTWILGGDFNVIRWKEETSTKNPASLSMKRFNTFISNCNLIDPP 104
Query: 89 -------------------------DMMWDVCFENSRVSRKARIFSDHFPLFLEAGSFLW 148
W+ F R SDHFP+ LE+ S W
Sbjct: 105 LTNAKFTWSNLRAQATLSRLDRFLFSTQWENIFPGHTSKVLTRTTSDHFPIVLESSSISW 164
Query: 149 GPSPFRFCNSWLVSSDSNQIIVETVSNSNFQGWAGFILHEQLRSVKLAVKAWN------- 208
GPSPFRF N++L D + I N++ G+AG+ +L+ + + +KAW
Sbjct: 165 GPSPFRFTNAYLKDPDYKRNIEFWWGNTSQPGFAGYSFMHRLKQLAMKIKAWGREKKGKD 224
Query: 209 -------IAQAKLIGLNQEELNS-------RAALQAELLSIYQNEERNFIQKSKLNWLSS 268
I + LI + E S R AL+A+L I E + + QK K W+
Sbjct: 225 EASKKAWIKEIDLINKLEAEGTSTEIHREKRIALKADLSQITLTEAQIWAQKCKRIWVHE 284
Query: 269 GDENTGFFHRFLNAKKRRNLITELKNDDGVVSTSFRDIERLVLEFFESLYTRIPGDRFIP 328
GDEN+ FFH+ A++++ LI+++ N G + DI ++ FE +YT
Sbjct: 285 GDENSSFFHKICTARQKKCLISKIINICGQNCLNDSDIVDAFIQHFEEIYTDNRNSHLFI 344
Query: 329 INSNWSCVSSIQNEALVTQFSVEEIFKALKALGNNKAPSPDGFTVKFLITQWSIFKDIFK 388
N +W +S+ + L F+ EI+ LK+ NKAP PDGFT+ FL WS K
Sbjct: 345 DNLDWCPISNTNSGLLDKPFNEAEIWLTLKSFAKNKAPGPDGFTMDFLQKSWSFMKQNIC 404
Query: 389 SLMSDFHRNGRLNACIQENFICLVQKKENVTLVKDFRPISLTTLAYKVVAKVLSERLKQV 432
+ DFH N +N + E I + KKEN V DFRPISLTT YK++AKVL++RLKQ
Sbjct: 405 DIFKDFHSNHTINKVVNETLITFIAKKENCETVADFRPISLTTAIYKLIAKVLADRLKQT 464
BLAST of CSPI03G23910 vs. ExPASy TrEMBL
Match:
A0A5D3E0F6 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001830 PE=4 SV=1)
HSP 1 Score: 265.4 bits (677), Expect = 4.2e-67
Identity = 153/458 (33.41%), Postives = 224/458 (48.91%), Query Frame = 0
Query: 29 RKLVWPELSSLADCSSVAWCIGGDFNITRWARERFPFGRSTRGMSLFNKFI--------- 88
R L W EL +L W +GGDFN+ RW E ++ M FN FI
Sbjct: 249 RPLFWEELENLKSICFPTWILGGDFNVIRWKEETSTKNPASLSMKRFNTFISNCNLIDPP 308
Query: 89 -------------------------DMMWDVCFENSRVSRKARIFSDHFPLFLEAGSFLW 148
W+ F R SDHFP+ LE+ + W
Sbjct: 309 LTNAKFTWSNLRAQATLSRLDRFLFSTHWENIFPGHTSKVLTRTTSDHFPIVLESSTISW 368
Query: 149 GPSPFRFCNSWLVSSDSNQIIVETVSNSNFQGWAGFILHEQLRSVKLAVKAWN------- 208
GPSPFRF N++L D + I N++ G+AG+ +L+ + L +KAW
Sbjct: 369 GPSPFRFTNAYLKDPDYKKNIEFWWGNTSQPGYAGYSFMHRLKQLALKIKAWGREKKGKN 428
Query: 209 -------IAQAKLIGLNQEE-------LNSRAALQAELLSIYQNEERNFIQKSKLNWLSS 268
I + LI + E R AL+A+L I E + + QK K W+
Sbjct: 429 EASKKAWIKEIDLIDKLEAEGSATEIHREKRIALKADLSQITLTEAQIWAQKCKRIWVHE 488
Query: 269 GDENTGFFHRFLNAKKRRNLITELKNDDGVVSTSFRDIERLVLEFFESLYTRIPGDRFIP 328
GDEN+ FFH+ A++++ LI+++ N+ G + DI ++ FE +YT
Sbjct: 489 GDENSSFFHKICTARQKKCLISKIINNSGQNCLNDSDIADAFIQHFEEIYTDNRNSHLFI 548
Query: 329 INSNWSCVSSIQNEALVTQFSVEEIFKALKALGNNKAPSPDGFTVKFLITQWSIFKDIFK 388
N +W +S+ ++ L F+ EI+ LK+ NKAP PDG+T+ FL WS K
Sbjct: 549 DNLDWCPISNTNSDLLDKPFNEAEIWLTLKSFAKNKAPGPDGYTMDFLQKSWSFMKQNIC 608
Query: 389 SLMSDFHRNGRLNACIQENFICLVQKKENVTLVKDFRPISLTTLAYKVVAKVLSERLKQV 432
+ DFH +N + E I L+ KKEN V DFRPISLTT YK++AK L++RLKQ
Sbjct: 609 DIFKDFHSTHTINKVVNETLITLIAKKENCETVADFRPISLTTAIYKLIAKALADRLKQT 668
BLAST of CSPI03G23910 vs. NCBI nr
Match:
XP_038884536.1 (DEAD-box ATP-dependent RNA helicase FANCM isoform X2 [Benincasa hispida])
HSP 1 Score: 287.3 bits (734), Expect = 2.1e-73
Identity = 146/301 (48.50%), Postives = 193/301 (64.12%), Query Frame = 0
Query: 66 GRSTRGMSLFNKFIDMMWDVCFENSRVSRKARIFSDHFPLFLEAGSFLWGPSPFRFCNSW 125
G ST+ L + WD FE+SRVSR+AR SDHFPL EAG+F WGPSPFRFCNSW
Sbjct: 51 GCSTKASPL----VSQNWDEFFEDSRVSRQARTISDHFPLLFEAGAFEWGPSPFRFCNSW 110
Query: 126 LVSSDSNQIIVETVSNSNFQGWAGFILHEQLRSVKLAVKAWNIAQAKLIGLNQEEL---- 185
L + + +II + Q WAGF L+ +LR VK +VK W K + +E L
Sbjct: 111 LKNKECCRIIENSSLIKGQQDWAGFALYSRLRRVKQSVKRWLAEHEKDQKIREESLLKEI 170
Query: 186 -----------------NSRAALQAELLSIYQNEERNFIQKSKLNWLSSGDENTGFFHRF 245
+ R +L+A+LLS+YQ EER+ IQKSKLNWL GDENT FFHRF
Sbjct: 171 KEKDLQADTLENFSAEEDVRVSLKADLLSLYQAEERDLIQKSKLNWLLLGDENTSFFHRF 230
Query: 246 LNAKKRRNLITELKNDDGVVSTSFRDIERLVLEFFESLYTRIPGDRFIPINSNWSCVSSI 305
L AK+R+NLI EL N+ G+ + SFR+IE ++L+FF +LYT+ G R IP+N WS VS+
Sbjct: 231 LAAKRRKNLIAELFNEQGLPTKSFREIETIILDFFSNLYTKCTGTRSIPLNMAWSRVSAE 290
Query: 306 QNEALVTQFSVEEIFKALKALGNNKAPSPDGFTVKFLITQWSIFKDIFKSLMSDFHRNGR 346
N L+ +FS EI A++ALG NKAP PDGFTV+F++ W++ KD FK + +F+ NG+
Sbjct: 291 GNSRLIAKFSTTEITVAIQALGKNKAPGPDGFTVEFILHFWNLLKDGFKDVFEEFYHNGK 347
BLAST of CSPI03G23910 vs. NCBI nr
Match:
XP_038884537.1 (DEAD-box ATP-dependent RNA helicase FANCM isoform X3 [Benincasa hispida])
HSP 1 Score: 287.3 bits (734), Expect = 2.1e-73
Identity = 146/301 (48.50%), Postives = 193/301 (64.12%), Query Frame = 0
Query: 66 GRSTRGMSLFNKFIDMMWDVCFENSRVSRKARIFSDHFPLFLEAGSFLWGPSPFRFCNSW 125
G ST+ L + WD FE+SRVSR+AR SDHFPL EAG+F WGPSPFRFCNSW
Sbjct: 51 GCSTKASPL----VSQNWDEFFEDSRVSRQARTISDHFPLLFEAGAFEWGPSPFRFCNSW 110
Query: 126 LVSSDSNQIIVETVSNSNFQGWAGFILHEQLRSVKLAVKAWNIAQAKLIGLNQEEL---- 185
L + + +II + Q WAGF L+ +LR VK +VK W K + +E L
Sbjct: 111 LKNKECCRIIENSSLIKGQQDWAGFALYSRLRRVKQSVKRWLAEHEKDQKIREESLLKEI 170
Query: 186 -----------------NSRAALQAELLSIYQNEERNFIQKSKLNWLSSGDENTGFFHRF 245
+ R +L+A+LLS+YQ EER+ IQKSKLNWL GDENT FFHRF
Sbjct: 171 KEKDLQADTLENFSAEEDVRVSLKADLLSLYQAEERDLIQKSKLNWLLLGDENTSFFHRF 230
Query: 246 LNAKKRRNLITELKNDDGVVSTSFRDIERLVLEFFESLYTRIPGDRFIPINSNWSCVSSI 305
L AK+R+NLI EL N+ G+ + SFR+IE ++L+FF +LYT+ G R IP+N WS VS+
Sbjct: 231 LAAKRRKNLIAELFNEQGLPTKSFREIETIILDFFSNLYTKCTGTRSIPLNMAWSRVSAE 290
Query: 306 QNEALVTQFSVEEIFKALKALGNNKAPSPDGFTVKFLITQWSIFKDIFKSLMSDFHRNGR 346
N L+ +FS EI A++ALG NKAP PDGFTV+F++ W++ KD FK + +F+ NG+
Sbjct: 291 GNSRLIAKFSTTEITVAIQALGKNKAPGPDGFTVEFILHFWNLLKDGFKDVFEEFYHNGK 347
BLAST of CSPI03G23910 vs. NCBI nr
Match:
XP_038884535.1 (DEAD-box ATP-dependent RNA helicase FANCM isoform X1 [Benincasa hispida])
HSP 1 Score: 287.3 bits (734), Expect = 2.1e-73
Identity = 146/301 (48.50%), Postives = 193/301 (64.12%), Query Frame = 0
Query: 66 GRSTRGMSLFNKFIDMMWDVCFENSRVSRKARIFSDHFPLFLEAGSFLWGPSPFRFCNSW 125
G ST+ L + WD FE+SRVSR+AR SDHFPL EAG+F WGPSPFRFCNSW
Sbjct: 51 GCSTKASPL----VSQNWDEFFEDSRVSRQARTISDHFPLLFEAGAFEWGPSPFRFCNSW 110
Query: 126 LVSSDSNQIIVETVSNSNFQGWAGFILHEQLRSVKLAVKAWNIAQAKLIGLNQEEL---- 185
L + + +II + Q WAGF L+ +LR VK +VK W K + +E L
Sbjct: 111 LKNKECCRIIENSSLIKGQQDWAGFALYSRLRRVKQSVKRWLAEHEKDQKIREESLLKEI 170
Query: 186 -----------------NSRAALQAELLSIYQNEERNFIQKSKLNWLSSGDENTGFFHRF 245
+ R +L+A+LLS+YQ EER+ IQKSKLNWL GDENT FFHRF
Sbjct: 171 KEKDLQADTLENFSAEEDVRVSLKADLLSLYQAEERDLIQKSKLNWLLLGDENTSFFHRF 230
Query: 246 LNAKKRRNLITELKNDDGVVSTSFRDIERLVLEFFESLYTRIPGDRFIPINSNWSCVSSI 305
L AK+R+NLI EL N+ G+ + SFR+IE ++L+FF +LYT+ G R IP+N WS VS+
Sbjct: 231 LAAKRRKNLIAELFNEQGLPTKSFREIETIILDFFSNLYTKCTGTRSIPLNMAWSRVSAE 290
Query: 306 QNEALVTQFSVEEIFKALKALGNNKAPSPDGFTVKFLITQWSIFKDIFKSLMSDFHRNGR 346
N L+ +FS EI A++ALG NKAP PDGFTV+F++ W++ KD FK + +F+ NG+
Sbjct: 291 GNSRLIAKFSTTEITVAIQALGKNKAPGPDGFTVEFILHFWNLLKDGFKDVFEEFYHNGK 347
BLAST of CSPI03G23910 vs. NCBI nr
Match:
CAN65484.1 (hypothetical protein VITISV_029474 [Vitis vinifera])
HSP 1 Score: 268.9 bits (686), Expect = 7.9e-68
Identity = 154/453 (34.00%), Postives = 224/453 (49.45%), Query Frame = 0
Query: 29 RKLVWPELSSLADCSSVAWCIGGDFNITRWARERFPFGRSTRGMSLFNKFI--------- 88
RK W ELS +A +S WC+GGDFN+ R + E+ R T M F+ FI
Sbjct: 780 RKDFWVELSDIAGLASPRWCVGGDFNVIRRSSEKLGGSRXTPSMKXFDDFISDCELIDLP 839
Query: 89 -------------------------DMMWDVCFENSRVSRKARIFSDHFPLFLEAGSFLW 148
W+ F S R SDH+P+ LE F W
Sbjct: 840 LRSASFTWSNMQVNXVCKRLDRFLYSNEWEQAFPQSIQGVLPRWTSDHWPIVLETNPFKW 899
Query: 149 GPSPFRFCNSWLVSSDSNQIIVETVSNSNFQGWAGFILHEQLRSVKLAVKAWNIAQ---- 208
GP+PFRF N WL + GW G +L+ VK +K WN A
Sbjct: 900 GPTPFRFENMWLQHPSFKENFGRWWREFQGNGWEGHKFMRKLQFVKAKLKVWNKASFGEL 959
Query: 209 --------AKLI---------GLNQEELNSRAALQAELLSIYQNEERNFIQKSKLNWLSS 268
+ L+ GL+ E L RA + EL + EE ++ QK+++ W+
Sbjct: 960 SKRKEDILSDLVNFDSLEQEGGLSHELLAQRALKKGELEELILREEIHWRQKARVKWVKE 1019
Query: 269 GDENTGFFHRFLNAKKRRNLITELKNDDGVVSTSFRDIERLVLEFFESLYTRIPGDRFIP 328
GD N+ FFH+ N ++ R I EL+N++G++ + I+ +L +FE LYT G+ +
Sbjct: 1020 GDCNSRFFHKVANGRRNRKFIKELENENGLMMNNSESIKEEILRYFEKLYTSPSGESWRV 1079
Query: 329 INSNWSCVSSIQNEALVTQFSVEEIFKALKALGNNKAPSPDGFTVKFLITQWSIFKDIFK 388
+WS +S L + F+ EEIFKA+ + +KAP PDGFT+ W + K+
Sbjct: 1080 EGLDWSPISGESAFRLESPFTEEEIFKAIFQMDRDKAPGPDGFTIAVFQDCWEVIKEDLV 1139
Query: 389 SLMSDFHRNGRLNACIQENFICLVQKKENVTLVKDFRPISLTTLAYKVVAKVLSERLKQV 427
+ ++FHR+G +N +FI L+ KK + DFRPISL T YK++AKVL+ R++ V
Sbjct: 1140 KVFTEFHRSGIINQSTNASFIVLLPKKSMSRRISDFRPISLITSLYKIIAKVLAGRIRGV 1199
BLAST of CSPI03G23910 vs. NCBI nr
Match:
TYJ99326.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])
HSP 1 Score: 267.3 bits (682), Expect = 2.3e-67
Identity = 157/458 (34.28%), Postives = 224/458 (48.91%), Query Frame = 0
Query: 29 RKLVWPELSSLADCSSVAWCIGGDFNITRWARERFPFGRSTRGMSLFNKFI--------- 88
R L W EL +L W +GGDFN+ RW E ++ M FN FI
Sbjct: 45 RPLFWEELENLKSICFPTWILGGDFNVIRWKEETSTKNPASLSMKRFNTFISNCNLIDPP 104
Query: 89 -------------------------DMMWDVCFENSRVSRKARIFSDHFPLFLEAGSFLW 148
W+ F R SDHFP+ LE+ S W
Sbjct: 105 LTNAKFTWSNLRAQATLSRLDRFLFSTQWENIFPGHTSKVLTRTTSDHFPIVLESSSISW 164
Query: 149 GPSPFRFCNSWLVSSDSNQIIVETVSNSNFQGWAGFILHEQLRSVKLAVKAWN------- 208
GPSPFRF N++L D + I N++ G+AG+ +L+ + + +KAW
Sbjct: 165 GPSPFRFTNAYLKDPDYKRNIEFWWGNTSQPGFAGYSFMHRLKQLAMKIKAWGREKKGKD 224
Query: 209 -------IAQAKLIGLNQEELNS-------RAALQAELLSIYQNEERNFIQKSKLNWLSS 268
I + LI + E S R AL+A+L I E + + QK K W+
Sbjct: 225 EASKKAWIKEIDLINKLEAEGTSTEIHREKRIALKADLSQITLTEAQIWAQKCKRIWVHE 284
Query: 269 GDENTGFFHRFLNAKKRRNLITELKNDDGVVSTSFRDIERLVLEFFESLYTRIPGDRFIP 328
GDEN+ FFH+ A++++ LI+++ N G + DI ++ FE +YT
Sbjct: 285 GDENSSFFHKICTARQKKCLISKIINICGQNCLNDSDIVDAFIQHFEEIYTDNRNSHLFI 344
Query: 329 INSNWSCVSSIQNEALVTQFSVEEIFKALKALGNNKAPSPDGFTVKFLITQWSIFKDIFK 388
N +W +S+ + L F+ EI+ LK+ NKAP PDGFT+ FL WS K
Sbjct: 345 DNLDWCPISNTNSGLLDKPFNEAEIWLTLKSFAKNKAPGPDGFTMDFLQKSWSFMKQNIC 404
Query: 389 SLMSDFHRNGRLNACIQENFICLVQKKENVTLVKDFRPISLTTLAYKVVAKVLSERLKQV 432
+ DFH N +N + E I + KKEN V DFRPISLTT YK++AKVL++RLKQ
Sbjct: 405 DIFKDFHSNHTINKVVNETLITFIAKKENCETVADFRPISLTTAIYKLIAKVLADRLKQT 464
BLAST of CSPI03G23910 vs. TAIR 10
Match:
AT1G43760.1 (DNAse I-like superfamily protein )
HSP 1 Score: 100.5 bits (249), Expect = 3.5e-21
Identity = 74/261 (28.35%), Postives = 122/261 (46.74%), Query Frame = 0
Query: 150 FILHEQLRSVKLAVKAWN-IAQAKLIGLNQEELNSRAALQAELL-----SIYQNE----- 209
F L E L++ K K N + +E L+S ++Q++LL S+++ E
Sbjct: 363 FSLGEHLKAAKKCCKLLNRQGFGNIQHKTKEALDSLESIQSQLLTNPSDSLFRVEHVARK 422
Query: 210 ---------ERNFIQKSKLNWLSSGDENTGFFHRFLNAKKRRNLITELKNDDGVVSTSFR 269
E + QKS++ WL GD NT FFH+ + A + +NLI L+ DD V +
Sbjct: 423 KWNFFAAALESFYRQKSRIKWLQDGDANTRFFHKVILANQAKNLIKFLRMDDDVRVENVT 482
Query: 270 DIERLVLEFFESLYTRIPGDRFIPINSNWSCVSSIQ----NEALVTQFSV----EEIFKA 329
++ +++ ++ L + D I + + I N+ L ++ S +EI A
Sbjct: 483 QVKEMIVAYYTHL---LGSDSDILTPDSVQRIKDIHPFRCNDTLASRLSALPSDKEITAA 542
Query: 330 LKALGNNKAPSPDGFTVKFLITQWSIFKDIFKSLMSDFHRNGRLNACIQENFICLVQKKE 383
+ A+ NKAP PD FT +F W + KD + + +F R G L I L+ K
Sbjct: 543 VFAMPRNKAPGPDSFTAEFFWESWFVVKDSTIAAVKEFFRTGHLLKRFNATAITLIPKVT 602
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| P14381 | 2.3e-22 | 27.56 | Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV... | [more] |
| P11369 | 4.0e-14 | 28.35 | LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE... | [more] |
| O00370 | 5.8e-13 | 25.61 | LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1 | [more] |
| P08548 | 4.9e-12 | 26.09 | LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| M5WPQ5 | 1.5e-69 | 34.42 | Reverse transcriptase domain-containing protein OS=Prunus persica OX=3760 GN=PRU... | [more] |
| A5BCI7 | 3.8e-68 | 34.00 | Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VI... | [more] |
| M5VS59 | 8.5e-68 | 34.20 | Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=... | [more] |
| A0A5D3BJP3 | 1.1e-67 | 34.28 | LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... | [more] |
| A0A5D3E0F6 | 4.2e-67 | 33.41 | LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_038884536.1 | 2.1e-73 | 48.50 | DEAD-box ATP-dependent RNA helicase FANCM isoform X2 [Benincasa hispida] | [more] |
| XP_038884537.1 | 2.1e-73 | 48.50 | DEAD-box ATP-dependent RNA helicase FANCM isoform X3 [Benincasa hispida] | [more] |
| XP_038884535.1 | 2.1e-73 | 48.50 | DEAD-box ATP-dependent RNA helicase FANCM isoform X1 [Benincasa hispida] | [more] |
| CAN65484.1 | 7.9e-68 | 34.00 | hypothetical protein VITISV_029474 [Vitis vinifera] | [more] |
| TYJ99326.1 | 2.3e-67 | 34.28 | LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT1G43760.1 | 3.5e-21 | 28.35 | DNAse I-like superfamily protein | [more] |
