CSPI03G23460 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGTTTTGCTAGTAGAGACATTTGATCGAGAATTGACCAATGAGTAGCGTAGTATATGGTTGAAGAAGGCTCGAAGCAGAACCAAGCAACAAAAAATGGCGATGTTCTGTAAATTCATCTCAGATGACGTTTGAAACTCCTAGAAGGAAGGTATTCCTATTCAAAAATGGTGCAGATTCTTCTCCAATGCTCTTCTCCTCCTCCTCCGCCTCCTTCTCCTACTTCCTCCAGGTATCACCATTTTCCATTTCCTTATTCTTTCTCCATTAATCCCTACGCTTTCTTGTGTTGTGTAATTTTACTTCCATTTTTCTGGGTTCATTTCAATTTGTGATTAAACTCGTGATTCCTGCTGTAGTTTTCGGGTATTTGCGTTGGCATTAGGAAATTTCGTAACTAGGTTGTGCGTTGTTGGACTGTATATTCAAAATAGGATACATGGGTTTAATTCAAGGGTCTTTTCTTAGGTTCTGAAAAATGGAGAAATGAATTTGCATTTGAACTGAGGTTGCATTCAGTTGGGCGACCGAGTTCATGGATTGAAAATGGCTGTGTACTTGAGTTTGATGCAATTGATATCAGTGGTTGAATTGGACACACGGTGTTGAAAGTAGTAATCAATATAATAAACAACTACTTGTGATAGTGTCATAGATGAGATGACTAGACCTCAGTCCTCAATGTTTAGTGCTTCTTTGTTTATGTTTATTTCTATTCTCTCACAACTGTTGGTTCAAACTAACTGATGGTCCATTTTATCAGCCATTGGCTTTTTCTGCTTATTTTTTTCAAATTTTTTTGTCTTTTTTGTAATCAGGGGAATGCCTGGCAAAGTAATGTTGAAGAATGGTTTTGAGCAATCTTCTCTAAGAAAGCTTGTGTCCCAGCATGTACTCTCTGGATTTGCTGCTTCATTGATATTTCTCACTCAAACAAACCAGGTTAGTGAGTCTATTGATTACTGCAAGACGTTAATGTAAGAACATTTCTAAAGATAGCTAAGTAGTCAACTTCGAGTAGTATCCGATCCATTGTTGATCTGTTTGGTTTTGTGTGCATTTAACTTGCATAATGGCATCAGAATGCCGGCAATTTAGATTCCATTGAAAAGCTTGGATCCCATCATTTATTTGCAAATAATAGGTTCAAAGGCTCTAAGAAGCATATGATATGCTGTGTTATGCAATTAGCTCTCTGTTCATAACGTTACACTGAATGAATATAGAGTTTCTTCGCAAGATCCAATGGTATTTGGGATTCATTAATTCATGTCATAGGAGAGGACATATACAGGATTACGTGACAAACTTTATGAATACAAGCAGAGCTTCATGTCTTACACTAGTTTCTTGATCAGGCTATCTCAGTAGATATACCTCGCCGTGAAAACTTGTGTCAGCTTGCAAGTGCAGAGAATGCTGCAGGCCTTCCTTTTGTCAATGATTCTGATGGAGGGGGGAGGTTGATGATGATGAGAGGAATGACAGCCAAAAATTTTGATCCTGTTCGATACTCAGGAAGATGGTTCGAAGTTGCATCACTTAAACGTGGATTTGCTGGCCAAGGTCAGGAAGACTGCCACTGCACCCAGGTGAACCTGACTGGTTGGTGTAGCTTATAGTTTCTTTTGTCTCTTGGAATCTGGACGATTACTCCTTTAATCATATATTTCAAACAACAACCAACCAGTCTTACATGCCTTTTGTGTAATGGAGCGAAAAAATGGCCTGGGCAAACTTAATCATTTACTCTAATGATGTTAATTATTAATCATTTACAGTCCAACAGCCATATGACTAAGTTAAGTCAATGTAGTAATCATACTGACGAATAAGATATTCCACTGTACCAATATGTAGGGTGTTTACACATTTGATATGGCGACACCAGCAATACAAGTAGATACCTTTTGTGTTCATGGAAGCCCCGACGGATATATAACTGGGATAAGAGGAAGAGTTCAGTGTCTTGCAGAGGAAGATTTACAGAAAAACGCAACTGAGCTGGAGAAGCAGGAGATGATCAAGGAGAAATGTTACCTGCGTTTTCCTACATTGCCATTTATCCCTAAGGAGCCATATGATGTCATTGCAACTGATTATGACAACTTTGCTATAGTTTCTGGAGCTAAAGACCTTAGCTTTGTTCAGGTAAATTTAAAGATTCAGTGCATATTTTAGTTTGGTTTAAATACCATTTTGATCCTGGTGGCTGATGCTATAACTTGTGATTTTAAAACGTTCTGACAGCTATACGTATATACAAATGGACTAATTACTGATATTTAGTTTAGTTTTCAAACAATTTGCTCATTAAAAACGGCTTAGAACTCCAATTGTAGGATTTTTTTTTTGTTGCAAAATCTTTAACTACGATTTTAGAGATTGTTAAAGGAAAACATATAAATGAGATTTCTCTATTTTACTGTCCTTCTCTATTCTATTGATTGACATTCAAACTTGCAAAACGGAAGAAATATGTTTCAATTTATACTCCTAAACTTTAGAAATTGTATTAGTTTAAACCTTGAACTTTTGTAAGTTTATCAATGTAAACCCTCCACTAAGACGCCTTTGGAGAAACATCATGTGAAACTCTTAATTGTATTAATTAAACCTGTAAACATTCATAAATGAATCAATTTAGAATTTTCTTCGAGACTCGTCTATGCATTTACTCTATTGTCTAATTTGTTATATTGACTTTTGAAAATTAATGCATGGATGATTTTTAAAGATAGCTATGAAGGAGCCTAAATTGATTAACTTATGAATATTTTGGAGCATAATTGATTCAAATCTTAAGTCTCACGTGATATTATTAGAAACGTATTATTAAAAAGAAATCTAAGAGAAGGAGTAAACTGATACACTTACAAAAATTTTGTGGTTAAGTTGATATAATTGTTGGTTCTGAGTTTTAACGAATACAACCTTTAAAGGTTAGGGGTACAAATTGATATTTCCTTCTATTTTTTTCTTTTTTTCTTTTCTTAATAAGCAAGGTTTTATTAAGCCATACTTTTCTTTTAGATTTGACTGCATCTTCAATGGAAATGATACATATGGTTTGTTCTATGTCTGCAACGCGTGTAATGACTACACTAAAACTAGCAAACAGGAGAGTATGATTTGCAAACTATAAAGATGTTTGAGACCATTTTTAGCATACATTGGTGCAGATTACAGAAAGGTAAACAACATGTGTATTTGAACCCTGAATAAATTGGATTACTAGTCTTCATCCTGGGTTAGAATGGCATTTATTTTTTTAAGAGTTTTTAGCAGTTCGAACCCCATTAGGCTTGGAATCATCAAGTTCTATACTTCAAATGGATAAATGGACTCTCCTTTTACTGAAATTGTAGCTTTGGTGAATGATAAACTACAGAGCGGTCAACTTATAATAACTTGAACGCCATTGTCTCCCATCTGCATCCCTTCTGATTGATTATTTTGATCATAAAATATAACAGATATATTCAAGAACGCCAAACCCGGGACGCGATTTCATAGAGAAGTACAAATCATACTTGTCAAACTTCGGGTACGATCCAAGCAAAATCAAGGACACTCCTCAAGATTGTGAAGTAATGTCAAATAGTCAGCTAGCTGCAATGATGTCAATGAGTGGAATGCAACAAGCTTTGACAAATCAGTTTCCAGATTTAGGGCTAAAGGCTCCTATTGAACTCAACCCTTTCACAAGTGTATTTGATACTTTCAAAAAGCTACTAGAACTCTATTTCAAGTAGTAGTTCTGCTGTGCTATCCGTGTTGTTGAGCACGCTGGTTTAAACGCTAATTATTGCTTTATTTAAATTATCGATTATTTTCTCATTCTCAC CGTTTTGCTAGTAGAGACATTTGATCGAGAATTGACCAATGAGTAGCGTAGTATATGGTTGAAGAAGGCTCGAAGCAGAACCAAGCAACAAAAAATGGCGATGTTCTGTAAATTCATCTCAGATGACGTTTGAAACTCCTAGAAGGAAGGTATTCCTATTCAAAAATGGTGCAGATTCTTCTCCAATGCTCTTCTCCTCCTCCTCCGCCTCCTTCTCCTACTTCCTCCAGGGGAATGCCTGGCAAAGTAATGTTGAAGAATGGTTTTGAGCAATCTTCTCTAAGAAAGCTTGTGTCCCAGCATGTACTCTCTGGATTTGCTGCTTCATTGATATTTCTCACTCAAACAAACCAGGCTATCTCAGTAGATATACCTCGCCGTGAAAACTTGTGTCAGCTTGCAAGTGCAGAGAATGCTGCAGGCCTTCCTTTTGTCAATGATTCTGATGGAGGGGGGAGGTTGATGATGATGAGAGGAATGACAGCCAAAAATTTTGATCCTGTTCGATACTCAGGAAGATGGTTCGAAGTTGCATCACTTAAACGTGGATTTGCTGGCCAAGGTCAGGAAGACTGCCACTGCACCCAGGGTGTTTACACATTTGATATGGCGACACCAGCAATACAAGTAGATACCTTTTGTGTTCATGGAAGCCCCGACGGATATATAACTGGGATAAGAGGAAGAGTTCAGTGTCTTGCAGAGGAAGATTTACAGAAAAACGCAACTGAGCTGGAGAAGCAGGAGATGATCAAGGAGAAATGTTACCTGCGTTTTCCTACATTGCCATTTATCCCTAAGGAGCCATATGATGTCATTGCAACTGATTATGACAACTTTGCTATAGTTTCTGGAGCTAAAGACCTTAGCTTTGTTCAGATATATTCAAGAACGCCAAACCCGGGACGCGATTTCATAGAGAAGTACAAATCATACTTGTCAAACTTCGGGTACGATCCAAGCAAAATCAAGGACACTCCTCAAGATTGTGAAGTAATGTCAAATAGTCAGCTAGCTGCAATGATGTCAATGAGTGGAATGCAACAAGCTTTGACAAATCAGTTTCCAGATTTAGGGCTAAAGGCTCCTATTGAACTCAACCCTTTCACAAGTGTATTTGATACTTTCAAAAAGCTACTAGAACTCTATTTCAAGTAGTAGTTCTGCTGTGCTATCCGTGTTGTTGAGCACGCTGGTTTAAACGCTAATTATTGCTTTATTTAAATTATCGATTATTTTCTCATTCTCAC ATGGTGCAGATTCTTCTCCAATGCTCTTCTCCTCCTCCTCCGCCTCCTTCTCCTACTTCCTCCAGGGGAATGCCTGGCAAAGTAATGTTGAAGAATGGTTTTGAGCAATCTTCTCTAAGAAAGCTTGTGTCCCAGCATGTACTCTCTGGATTTGCTGCTTCATTGATATTTCTCACTCAAACAAACCAGGCTATCTCAGTAGATATACCTCGCCGTGAAAACTTGTGTCAGCTTGCAAGTGCAGAGAATGCTGCAGGCCTTCCTTTTGTCAATGATTCTGATGGAGGGGGGAGGTTGATGATGATGAGAGGAATGACAGCCAAAAATTTTGATCCTGTTCGATACTCAGGAAGATGGTTCGAAGTTGCATCACTTAAACGTGGATTTGCTGGCCAAGGTCAGGAAGACTGCCACTGCACCCAGGGTGTTTACACATTTGATATGGCGACACCAGCAATACAAGTAGATACCTTTTGTGTTCATGGAAGCCCCGACGGATATATAACTGGGATAAGAGGAAGAGTTCAGTGTCTTGCAGAGGAAGATTTACAGAAAAACGCAACTGAGCTGGAGAAGCAGGAGATGATCAAGGAGAAATGTTACCTGCGTTTTCCTACATTGCCATTTATCCCTAAGGAGCCATATGATGTCATTGCAACTGATTATGACAACTTTGCTATAGTTTCTGGAGCTAAAGACCTTAGCTTTGTTCAGATATATTCAAGAACGCCAAACCCGGGACGCGATTTCATAGAGAAGTACAAATCATACTTGTCAAACTTCGGGTACGATCCAAGCAAAATCAAGGACACTCCTCAAGATTGTGAAGTAATGTCAAATAGTCAGCTAGCTGCAATGATGTCAATGAGTGGAATGCAACAAGCTTTGACAAATCAGTTTCCAGATTTAGGGCTAAAGGCTCCTATTGAACTCAACCCTTTCACAAGTGTATTTGATACTTTCAAAAAGCTACTAGAACTCTATTTCAAGTAG MVQILLQCSSPPPPPPSPTSSRGMPGKVMLKNGFEQSSLRKLVSQHVLSGFAASLIFLTQTNQAISVDIPRRENLCQLASAENAAGLPFVNDSDGGGRLMMMRGMTAKNFDPVRYSGRWFEVASLKRGFAGQGQEDCHCTQGVYTFDMATPAIQVDTFCVHGSPDGYITGIRGRVQCLAEEDLQKNATELEKQEMIKEKCYLRFPTLPFIPKEPYDVIATDYDNFAIVSGAKDLSFVQIYSRTPNPGRDFIEKYKSYLSNFGYDPSKIKDTPQDCEVMSNSQLAAMMSMSGMQQALTNQFPDLGLKAPIELNPFTSVFDTFKKLLELYFK* Homology
BLAST of CSPI03G23460 vs. ExPASy Swiss-Prot
Match: Q9STS7 (Chloroplastic lipocalin OS=Arabidopsis thaliana OX=3702 GN=CHL PE=1 SV=1) HSP 1 Score: 430.3 bits (1105), Expect = 2.0e-119 Identity = 215/309 (69.58%), Postives = 253/309 (81.88%), Query Frame = 0
BLAST of CSPI03G23460 vs. ExPASy Swiss-Prot
Match: P51910 (Apolipoprotein D OS=Mus musculus OX=10090 GN=Apod PE=1 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 1.0e-09 Identity = 49/172 (28.49%), Postives = 72/172 (41.86%), Query Frame = 0
BLAST of CSPI03G23460 vs. ExPASy Swiss-Prot
Match: P05090 (Apolipoprotein D OS=Homo sapiens OX=9606 GN=APOD PE=1 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 3.6e-07 Identity = 51/179 (28.49%), Postives = 80/179 (44.69%), Query Frame = 0
BLAST of CSPI03G23460 vs. ExPASy Swiss-Prot
Match: Q8SPI0 (Apolipoprotein D OS=Macaca fascicularis OX=9541 GN=APOD PE=2 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 2.0e-05 Identity = 44/177 (24.86%), Postives = 72/177 (40.68%), Query Frame = 0
BLAST of CSPI03G23460 vs. ExPASy Swiss-Prot
Match: P23593 (Apolipoprotein D OS=Rattus norvegicus OX=10116 GN=Apod PE=1 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 2.6e-05 Identity = 44/172 (25.58%), Postives = 68/172 (39.53%), Query Frame = 0
BLAST of CSPI03G23460 vs. ExPASy TrEMBL
Match: A0A0A0LBK6 (Lipocln_cytosolic_FA-bd_dom domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G426340 PE=3 SV=1) HSP 1 Score: 668.7 bits (1724), Expect = 1.3e-188 Identity = 329/330 (99.70%), Postives = 329/330 (99.70%), Query Frame = 0
BLAST of CSPI03G23460 vs. ExPASy TrEMBL
Match: A0A1S3BYS9 (chloroplastic lipocalin OS=Cucumis melo OX=3656 GN=LOC103494915 PE=3 SV=1) HSP 1 Score: 649.0 bits (1673), Expect = 1.0e-182 Identity = 320/330 (96.97%), Postives = 324/330 (98.18%), Query Frame = 0
BLAST of CSPI03G23460 vs. ExPASy TrEMBL
Match: A0A5D3BW66 (Chloroplastic lipocalin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold566G00030 PE=3 SV=1) HSP 1 Score: 614.0 bits (1582), Expect = 3.7e-172 Identity = 300/307 (97.72%), Postives = 304/307 (99.02%), Query Frame = 0
BLAST of CSPI03G23460 vs. ExPASy TrEMBL
Match: A0A6J1CC31 (chloroplastic lipocalin OS=Momordica charantia OX=3673 GN=LOC111010299 PE=3 SV=1) HSP 1 Score: 613.2 bits (1580), Expect = 6.3e-172 Identity = 300/326 (92.02%), Postives = 312/326 (95.71%), Query Frame = 0
BLAST of CSPI03G23460 vs. ExPASy TrEMBL
Match: A0A6J1IZS8 (chloroplastic lipocalin OS=Cucurbita maxima OX=3661 GN=LOC111480629 PE=3 SV=1) HSP 1 Score: 579.3 bits (1492), Expect = 1.0e-161 Identity = 289/326 (88.65%), Postives = 297/326 (91.10%), Query Frame = 0
BLAST of CSPI03G23460 vs. NCBI nr
Match: XP_004151949.1 (chloroplastic lipocalin isoform X1 [Cucumis sativus] >KGN57997.1 hypothetical protein Csa_009750 [Cucumis sativus]) HSP 1 Score: 668.7 bits (1724), Expect = 2.6e-188 Identity = 329/330 (99.70%), Postives = 329/330 (99.70%), Query Frame = 0
BLAST of CSPI03G23460 vs. NCBI nr
Match: XP_008454519.1 (PREDICTED: chloroplastic lipocalin [Cucumis melo]) HSP 1 Score: 649.0 bits (1673), Expect = 2.1e-182 Identity = 320/330 (96.97%), Postives = 324/330 (98.18%), Query Frame = 0
BLAST of CSPI03G23460 vs. NCBI nr
Match: XP_038896860.1 (chloroplastic lipocalin [Benincasa hispida]) HSP 1 Score: 623.6 bits (1607), Expect = 9.6e-175 Identity = 310/326 (95.09%), Postives = 312/326 (95.71%), Query Frame = 0
BLAST of CSPI03G23460 vs. NCBI nr
Match: KAA0053105.1 (chloroplastic lipocalin [Cucumis melo var. makuwa] >TYK03315.1 chloroplastic lipocalin [Cucumis melo var. makuwa]) HSP 1 Score: 614.0 bits (1582), Expect = 7.6e-172 Identity = 300/307 (97.72%), Postives = 304/307 (99.02%), Query Frame = 0
BLAST of CSPI03G23460 vs. NCBI nr
Match: XP_022139350.1 (chloroplastic lipocalin [Momordica charantia]) HSP 1 Score: 613.2 bits (1580), Expect = 1.3e-171 Identity = 300/326 (92.02%), Postives = 312/326 (95.71%), Query Frame = 0
BLAST of CSPI03G23460 vs. TAIR 10
Match: AT3G47860.1 (chloroplastic lipocalin ) HSP 1 Score: 430.3 bits (1105), Expect = 1.5e-120 Identity = 215/309 (69.58%), Postives = 253/309 (81.88%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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