CSPI03G19620 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G19620
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Dof-type domain-containing protein
Location	Chr3: 15382295 .. 15383663 (-)
RNA-Seq Expression	CSPI03G19620
Synteny	CSPI03G19620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGCTTTTGGACCATCTGCAAGAATTAAAGCAAGAAATCAAGTAGTCTTTGCTCATCTCCCTCACAACTCTCTATAATGGATTCTGCTCACTGGCCTCAGGTATGGCTCAGTGAACCCTTCTCTGTTTCTCTAGTCTTTCTCTAAATGATCATTTCTTATAATCTGTGTTTGTGTTATTGTGATGAATATTGGGAGATGCAGGTTGAAGTTAAGAACATGGAATTAGAAGAAGAGGGTCTAAAGGCAGTTGTGGAAAGAAAAGCAAAAGCTAGGAAAGATCAAATATTGAACTGTCCAAGATGCAATTCCAACAACACAAAGTTCTGTTACTACAACAATTACAGTCTCTCACAGCCAAGATACTTCTGTAAGTCTTGTAGAAGATATTGGACAGCTGGTGGGTCTTTAAGGAACATTCCAGTTGGTGGGGCATCTAGGAAGAACAAGAGACCTTCAGCTAATTTTTCATTACCTCCTTCAAAGAACAATCAAAAGAATTATAATAATGATGGTGGTGACGATGATGATCAGGGCATTTCCCAATTAAATATCAATATTACTTCTTGTTCTTCAACTGCCACCACTACTAACACTGCTACTTCTTGTTGTTGGCTGTCATCTGATAATGATCATATGAATAATCAAATAATGCTGAGAAGTAATGGCATAATGTCTCAAAGGGAGCTCATTCCTTTTATTCCTATGCCTGCACCAGCTCCTCCACAGCCTACTGCTGTTGCTGCTTTGGAGGATTTCAAGCAACTTTCAACCATCATTTCTACTGATCAAAATGGAGCTAAATTGGGGGATGCTCCTGCATTTTGGAGTGGCATTTTTGGTGGAGGTTCATGGTGAAACTTCTCCGCACTAATAAGCTACAGGTGAATTTATAATATATGTTTGTAAATTTGGGGTGATTTTATATTCTCATTGCATTTTTATTACACAAACACACATAAATACCATCTGTTTAATTACTTTTCATTTCTTGGCTTAAGAATTGGGAGGGTAGAAGTATATAACCTGGTGAGTTTTAGAATCTAAATAGGGGTCATTTTGAAGATGTTAATGATCATAATGTGTGTGTTTTAATTAGTTTTCCCTCCCTTTTTTAGTACAGAAATGAAAACCAAAACAAACAAAAAGATAAATTAAGGGGTTTGAGTATCGCTACCATCTATGGACAGCCGAGGTTACACATGATGGGTGATAATTCCCTTCCCAAGAGTCTTTAATTGTCCCTTTTGGATTATGTGTTGCATTTGTGTTTAGGGATCAAACGTATTTGTGCTTTGTGTATATACATTATTTTTACTAATTAGCTTCAAGAGATTGTTGTATGAAAATGGTCAAGGTTTGAAAAGAGAGA

mRNA sequence

TGCTTTTGGACCATCTGCAAGAATTAAAGCAAGAAATCAAGTAGTCTTTGCTCATCTCCCTCACAACTCTCTATAATGGATTCTGCTCACTGGCCTCAGGTTGAAGTTAAGAACATGGAATTAGAAGAAGAGGGTCTAAAGGCAGTTGTGGAAAGAAAAGCAAAAGCTAGGAAAGATCAAATATTGAACTGTCCAAGATGCAATTCCAACAACACAAAGTTCTGTTACTACAACAATTACAGTCTCTCACAGCCAAGATACTTCTGTAAGTCTTGTAGAAGATATTGGACAGCTGGTGGGTCTTTAAGGAACATTCCAGTTGGTGGGGCATCTAGGAAGAACAAGAGACCTTCAGCTAATTTTTCATTACCTCCTTCAAAGAACAATCAAAAGAATTATAATAATGATGGTGGTGACGATGATGATCAGGGCATTTCCCAATTAAATATCAATATTACTTCTTGTTCTTCAACTGCCACCACTACTAACACTGCTACTTCTTGTTGTTGGCTGTCATCTGATAATGATCATATGAATAATCAAATAATGCTGAGAAGTAATGGCATAATGTCTCAAAGGGAGCTCATTCCTTTTATTCCTATGCCTGCACCAGCTCCTCCACAGCCTACTGCTGTTGCTGCTTTGGAGGATTTCAAGCAACTTTCAACCATCATTTCTACTGATCAAAATGGAGCTAAATTGGGGGATGCTCCTGCATTTTGGAGTGGCATTTTTGGTGGAGGTTCATGGTGAAACTTCTCCGCACTAATAAGCTACAGGTGAATTTATAATATATGTTTGTAAATTTGGGGTGATTTTATATTCTCATTGCATTTTTATTACACAAACACACATAAATACCATCTGTTTAATTACTTTTCATTTCTTGGCTTAAGAATTGGGAGGGTAGAAGTATATAACCTGGTGAGTTTTAGAATCTAAATAGGGGTCATTTTGAAGATGTTAATGATCATAATGTGTGTGTTTTAATTAGTTTTCCCTCCCTTTTTTAGTACAGAAATGAAAACCAAAACAAACAAAAAGATAAATTAAGGGGTTTGAGTATCGCTACCATCTATGGACAGCCGAGGTTACACATGATGGGTGATAATTCCCTTCCCAAGAGTCTTTAATTGTCCCTTTTGGATTATGTGTTGCATTTGTGTTTAGGGATCAAACGTATTTGTGCTTTGTGTATATACATTATTTTTACTAATTAGCTTCAAGAGATTGTTGTATGAAAATGGTCAAGGTTTGAAAAGAGAGA

Coding sequence (CDS)

ATGGATTCTGCTCACTGGCCTCAGGTTGAAGTTAAGAACATGGAATTAGAAGAAGAGGGTCTAAAGGCAGTTGTGGAAAGAAAAGCAAAAGCTAGGAAAGATCAAATATTGAACTGTCCAAGATGCAATTCCAACAACACAAAGTTCTGTTACTACAACAATTACAGTCTCTCACAGCCAAGATACTTCTGTAAGTCTTGTAGAAGATATTGGACAGCTGGTGGGTCTTTAAGGAACATTCCAGTTGGTGGGGCATCTAGGAAGAACAAGAGACCTTCAGCTAATTTTTCATTACCTCCTTCAAAGAACAATCAAAAGAATTATAATAATGATGGTGGTGACGATGATGATCAGGGCATTTCCCAATTAAATATCAATATTACTTCTTGTTCTTCAACTGCCACCACTACTAACACTGCTACTTCTTGTTGTTGGCTGTCATCTGATAATGATCATATGAATAATCAAATAATGCTGAGAAGTAATGGCATAATGTCTCAAAGGGAGCTCATTCCTTTTATTCCTATGCCTGCACCAGCTCCTCCACAGCCTACTGCTGTTGCTGCTTTGGAGGATTTCAAGCAACTTTCAACCATCATTTCTACTGATCAAAATGGAGCTAAATTGGGGGATGCTCCTGCATTTTGGAGTGGCATTTTTGGTGGAGGTTCATGGTGA

Protein sequence

MDSAHWPQVEVKNMELEEEGLKAVVERKAKARKDQILNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPSANFSLPPSKNNQKNYNNDGGDDDDQGISQLNINITSCSSTATTTNTATSCCWLSSDNDHMNNQIMLRSNGIMSQRELIPFIPMPAPAPPQPTAVAALEDFKQLSTIISTDQNGAKLGDAPAFWSGIFGGGSW*

Homology

[Close]

BLAST of CSPI03G19620 vs. ExPASy Swiss-Prot
Match: Q8LAP8 (Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana OX=3702 GN=DOF4.6 PE=2 SV=2)

HSP 1 Score: 129.0 bits (323), Expect = 6.6e-29
Identity = 68/113 (60.18%), Postives = 79/113 (69.91%), Query Frame = 0


Query: 1   MDSAHWPQ-VEVKNME--------------LEEEGLKAV-VERKAKARKDQILNCPRCNS 60
           MD+A WPQ + VK +E              L+ +   +V  ERKA+  KDQ +NCPRCNS
Sbjct: 1   MDTAQWPQEIVVKPLEEIVTNTCPKPQPQPLQPQQPPSVGGERKARPEKDQAVNCPRCNS 60

Query: 61  NNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPSANFS 98
            NTKFCYYNNYSL+QPRYFCK CRRYWT GGSLRNIPVGG SRKNKR  ++ S
Sbjct: 61  TNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNIPVGGGSRKNKRSHSSSS 113

[Close]

BLAST of CSPI03G19620 vs. ExPASy Swiss-Prot
Match: Q84JQ8 (Dof zinc finger protein DOF1.8 OS=Arabidopsis thaliana OX=3702 GN=DOF1.8 PE=2 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 8.7e-29
Identity = 78/147 (53.06%), Postives = 90/147 (61.22%), Query Frame = 0


Query: 1   MDSAHWPQ---VEVKNMELEEEGLK---------AVVERKAKARKDQILNCPRCNSNNTK 60
           MD+A WPQ   V+  N  +    LK           VERKA+  KDQ LNCPRCNS NTK
Sbjct: 1   MDTAKWPQEFVVKPMNEIVTNTCLKQQSNPPSPATPVERKARPEKDQALNCPRCNSLNTK 60

Query: 61  FCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPSAN--FSLPPSKNNQK 120
           FCYYNNYSL+QPRYFCK CRRYWTAGGSLRNIPVGG  RKNKR S+N   S P S ++ K
Sbjct: 61  FCYYNNYSLTQPRYFCKDCRRYWTAGGSLRNIPVGGGVRKNKRSSSNSSSSSPSSSSSSK 120

Query: 121 NYNNDGGDDDDQGISQLNINITSCSST 134
                  +     +  LN  I   ++T
Sbjct: 121 KPLFANNNTPTPPLPHLNPKIGEAAAT 147

[Close]

BLAST of CSPI03G19620 vs. ExPASy Swiss-Prot
Match: B9F1L8 (Dof zinc finger protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF2 PE=2 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 3.3e-28
Identity = 56/76 (73.68%), Postives = 65/76 (85.53%), Query Frame = 0


Query: 20  GLKAVVERKAKARKDQILNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRN 79
           G  A  ER+A+ +K++ LNCPRCNS NTKFCYYNNYSL QPRYFCK+CRRYWT GGSLRN
Sbjct: 63  GAGAGTERRARPQKEKALNCPRCNSTNTKFCYYNNYSLQQPRYFCKTCRRYWTEGGSLRN 122

Query: 80  IPVGGASRKNKRPSAN 96
           +PVGG SRKNKR S++
Sbjct: 123 VPVGGGSRKNKRSSSS 138

[Close]

BLAST of CSPI03G19620 vs. ExPASy Swiss-Prot
Match: Q9SXG8 (Dof zinc finger protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF1 PE=2 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.3e-27
Identity = 54/70 (77.14%), Postives = 63/70 (90.00%), Query Frame = 0


Query: 26  ERKAKARKDQILNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGA 85
           ER+A+ +K++ LNCPRCNS NTKFCYYNNYSL QPRYFCK+CRRYWT GGSLRN+PVGG 
Sbjct: 67  ERRARPQKEKALNCPRCNSTNTKFCYYNNYSLQQPRYFCKTCRRYWTEGGSLRNVPVGGG 126

Query: 86  SRKNKRPSAN 96
           SRKNKR S++
Sbjct: 127 SRKNKRSSSS 136

[Close]

BLAST of CSPI03G19620 vs. ExPASy Swiss-Prot
Match: Q9ZPY0 (Dof zinc finger protein DOF2.5 OS=Arabidopsis thaliana OX=3702 GN=DOF2.5 PE=2 SV=3)

HSP 1 Score: 121.7 bits (304), Expect = 1.1e-26
Identity = 55/73 (75.34%), Postives = 62/73 (84.93%), Query Frame = 0


Query: 25  VERKAKARKDQILNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGG 84
           V  + KAR  + LNCPRCNS NTKFCYYNNYSL+QPRYFCK CRRYWT GGSLRN+PVGG
Sbjct: 68  VVAERKARPQEKLNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGG 127

Query: 85  ASRKNKRPSANFS 98
           +SRKNKR S++ S
Sbjct: 128 SSRKNKRSSSSSS 140

[Close]

BLAST of CSPI03G19620 vs. ExPASy TrEMBL
Match: A0A0A0L9J3 (Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G238150 PE=4 SV=1)

HSP 1 Score: 455.3 bits (1170), Expect = 1.5e-124
Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 0


Query: 1   MDSAHWPQVEVKNMELEEEGLKAVVERKAKARKDQILNCPRCNSNNTKFCYYNNYSLSQP 60
           MDSAHWPQVEVKNMELEEEGLKAVVERKAKARKDQILNCPRCNSNNTKFCYYNNYSLSQP
Sbjct: 1   MDSAHWPQVEVKNMELEEEGLKAVVERKAKARKDQILNCPRCNSNNTKFCYYNNYSLSQP 60

Query: 61  RYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPSANFSLPPSKNNQKNYNNDGGDDDDQGI 120
           RYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPSANFSLPPSKNNQKNYNNDGGDDDDQGI
Sbjct: 61  RYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPSANFSLPPSKNNQKNYNNDGGDDDDQGI 120

Query: 121 SQLNINITSCSSTATTTNTATSCCWLSSDNDHMNNQIMLRSNGIMSQRELIPFIPMPAPA 180
           SQLNINITSCSSTATTTNTATSCCWLSSDNDHMNNQIMLRSNGIMSQRELIPFIPMPAPA
Sbjct: 121 SQLNINITSCSSTATTTNTATSCCWLSSDNDHMNNQIMLRSNGIMSQRELIPFIPMPAPA 180

Query: 181 PPQPTAVAALEDFKQLSTIISTDQNGAKLGDAPAFWSGIFGGGSW 226
           PPQPTAVAALEDFKQLSTIISTDQNGAKLGDAPAFWSGIFGGGSW
Sbjct: 181 PPQPTAVAALEDFKQLSTIISTDQNGAKLGDAPAFWSGIFGGGSW 225

[Close]

BLAST of CSPI03G19620 vs. ExPASy TrEMBL
Match: A0A5D3CLI1 (Dof zinc finger protein DOF1.8-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G001330 PE=4 SV=1)

HSP 1 Score: 434.1 bits (1115), Expect = 3.6e-118
Identity = 218/228 (95.61%), Postives = 222/228 (97.37%), Query Frame = 0


Query: 1   MDSAHWPQVEVKNMEL-EEEGLKAVVERKAKARKDQILNCPRCNSNNTKFCYYNNYSLSQ 60
           MDSAHWPQVEVKNM+L EEEG+KAVVERKAKARKDQILNCPRCNSNNTKFCYYNNYSLSQ
Sbjct: 1   MDSAHWPQVEVKNMDLEEEEGIKAVVERKAKARKDQILNCPRCNSNNTKFCYYNNYSLSQ 60

Query: 61  PRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPSANFSLPPSKNNQKNYNNDGGDDDDQG 120
           PRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPSANFSLPPSKNNQKNYNN GG DDDQG
Sbjct: 61  PRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPSANFSLPPSKNNQKNYNNGGGGDDDQG 120

Query: 121 ISQLNINITSCSSTATTTNTATSCCWLSSDNDHMNNQIMLRSNGIMSQRELIPFIPMPAP 180
           ISQLNINITSCSSTATTTNTA +CCWLSSDNDHMNNQIMLRSNGIMSQRELIPFIPMPAP
Sbjct: 121 ISQLNINITSCSSTATTTNTAATCCWLSSDNDHMNNQIMLRSNGIMSQRELIPFIPMPAP 180

Query: 181 APPQPTA--VAALEDFKQLSTIISTDQNGAKLGDAPAFWSGIFGGGSW 226
           APPQPTA  VAALEDFKQLSTIISTDQNGAKLGDAPAFW+GIFGGGSW
Sbjct: 181 APPQPTAVSVAALEDFKQLSTIISTDQNGAKLGDAPAFWNGIFGGGSW 228

[Close]

BLAST of CSPI03G19620 vs. ExPASy TrEMBL
Match: A0A1S3C3F2 (dof zinc finger protein DOF1.8-like OS=Cucumis melo OX=3656 GN=LOC103496053 PE=4 SV=1)

HSP 1 Score: 434.1 bits (1115), Expect = 3.6e-118
Identity = 218/228 (95.61%), Postives = 222/228 (97.37%), Query Frame = 0


Query: 1   MDSAHWPQVEVKNMEL-EEEGLKAVVERKAKARKDQILNCPRCNSNNTKFCYYNNYSLSQ 60
           MDSAHWPQVEVKNM+L EEEG+KAVVERKAKARKDQILNCPRCNSNNTKFCYYNNYSLSQ
Sbjct: 1   MDSAHWPQVEVKNMDLEEEEGIKAVVERKAKARKDQILNCPRCNSNNTKFCYYNNYSLSQ 60

Query: 61  PRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPSANFSLPPSKNNQKNYNNDGGDDDDQG 120
           PRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPSANFSLPPSKNNQKNYNN GG DDDQG
Sbjct: 61  PRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPSANFSLPPSKNNQKNYNNGGGGDDDQG 120

Query: 121 ISQLNINITSCSSTATTTNTATSCCWLSSDNDHMNNQIMLRSNGIMSQRELIPFIPMPAP 180
           ISQLNINITSCSSTATTTNTA +CCWLSSDNDHMNNQIMLRSNGIMSQRELIPFIPMPAP
Sbjct: 121 ISQLNINITSCSSTATTTNTAATCCWLSSDNDHMNNQIMLRSNGIMSQRELIPFIPMPAP 180

Query: 181 APPQPTA--VAALEDFKQLSTIISTDQNGAKLGDAPAFWSGIFGGGSW 226
           APPQPTA  VAALEDFKQLSTIISTDQNGAKLGDAPAFW+GIFGGGSW
Sbjct: 181 APPQPTAVSVAALEDFKQLSTIISTDQNGAKLGDAPAFWNGIFGGGSW 228

[Close]

BLAST of CSPI03G19620 vs. ExPASy TrEMBL
Match: A0A6J1E5U7 (dof zinc finger protein DOF5.7-like OS=Cucurbita moschata OX=3662 GN=LOC111430855 PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 3.9e-80
Identity = 174/243 (71.60%), Postives = 189/243 (77.78%), Query Frame = 0


Query: 1   MDSAHWPQVEVKNMELEEEGLKAVVERKAKARKDQILNCPRCNSNNTKFCYYNNYSLSQP 60
           MDSA WPQVEVK+MELEEEG KA +ERKAK  KDQIL+CPRCNSNNTKFCYYNNYSLSQP
Sbjct: 1   MDSAGWPQVEVKSMELEEEGRKAGLERKAKPGKDQILSCPRCNSNNTKFCYYNNYSLSQP 60

Query: 61  RYFCKSCRRYWTAGGSLRNIPVGGASRKNKR-PSANFSLPPSKNNQKNYNNDGGDDDDQG 120
           RYFCKSCRRYWTAGGSLRNIPVGGASRKNKR PS NF  PP KNN K+Y ++ GDDDDQG
Sbjct: 61  RYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPPSPNFPSPP-KNNNKDYMSN-GDDDDQG 120

Query: 121 ISQLNINITSCSSTATTTNTATSCCWLSSDNDHMNNQIMLRSNGIMSQRELIPFIPMPAP 180
            SQ +   T C S    TN AT  CWLSSD+  MN+QIM+RS+GIMS RELIPFIPMPAP
Sbjct: 121 NSQTSNINTPCPS---ATNIAT--CWLSSDD--MNDQIMVRSSGIMSPRELIPFIPMPAP 180

Query: 181 APPQPTA----------------VAALEDFKQLSTIISTD-QNGAKLGDAPAFWSGIFGG 226
           APPQPT                  A +EDFKQL  IISTD QNG KLG+ PAFW+GI+GG
Sbjct: 181 APPQPTTSTITAPDACNPSTTLFTATVEDFKQLPPIISTDHQNGGKLGEVPAFWNGIYGG 234

[Close]

BLAST of CSPI03G19620 vs. ExPASy TrEMBL
Match: A0A6J1J8T6 (dof zinc finger protein DOF5.7-like OS=Cucurbita maxima OX=3661 GN=LOC111482784 PE=4 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 5.0e-80
Identity = 173/243 (71.19%), Postives = 187/243 (76.95%), Query Frame = 0


Query: 1   MDSAHWPQVEVKNMELEEEGLKAVVERKAKARKDQILNCPRCNSNNTKFCYYNNYSLSQP 60
           MDSA WPQVEVK+MELEEEG +A +ERKAK  KDQILNCPRCNSNNTKFCYYNNYSLSQP
Sbjct: 1   MDSARWPQVEVKSMELEEEGRRAGLERKAKPGKDQILNCPRCNSNNTKFCYYNNYSLSQP 60

Query: 61  RYFCKSCRRYWTAGGSLRNIPVGGASRKNKR-PSANFSLPPSKNNQKNYNNDGGDDDDQG 120
           RYFCKSCRRYWTAGGSLRNIPVGGASRKNKR PS NF  PP KNN K+Y ++ GDDDDQG
Sbjct: 61  RYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPPSPNFPSPP-KNNNKDYMSN-GDDDDQG 120

Query: 121 ISQLNINITSCSSTATTTNTATSCCWLSSDNDHMNNQIMLRSNGIMSQRELIPFIPMPAP 180
            SQ +   T C S    TN AT  CWLS D   MN+QIM+RS+GIMS RELIPFIPMP P
Sbjct: 121 NSQSSNINTPCPS---ATNIAT--CWLSCDG--MNDQIMVRSSGIMSPRELIPFIPMPVP 180

Query: 181 APPQPTA----------------VAALEDFKQLSTIISTD-QNGAKLGDAPAFWSGIFGG 226
           APPQPT                    +EDFKQL TIISTD QNGAKLG+ PAFW+GI+GG
Sbjct: 181 APPQPTTSTITAPDACNPSTTLFTTTVEDFKQLPTIISTDHQNGAKLGEVPAFWNGIYGG 234

[Close]

BLAST of CSPI03G19620 vs. NCBI nr
Match: XP_004146271.1 (dof zinc finger protein DOF1.8 [Cucumis sativus] >XP_011651310.1 dof zinc finger protein DOF1.8 [Cucumis sativus] >XP_011651312.1 dof zinc finger protein DOF1.8 [Cucumis sativus] >XP_031737984.1 dof zinc finger protein DOF1.8 [Cucumis sativus] >XP_031737985.1 dof zinc finger protein DOF1.8 [Cucumis sativus] >KGN57649.1 hypothetical protein Csa_011544 [Cucumis sativus])

HSP 1 Score: 455.3 bits (1170), Expect = 3.1e-124
Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 0


Query: 1   MDSAHWPQVEVKNMELEEEGLKAVVERKAKARKDQILNCPRCNSNNTKFCYYNNYSLSQP 60
           MDSAHWPQVEVKNMELEEEGLKAVVERKAKARKDQILNCPRCNSNNTKFCYYNNYSLSQP
Sbjct: 1   MDSAHWPQVEVKNMELEEEGLKAVVERKAKARKDQILNCPRCNSNNTKFCYYNNYSLSQP 60

Query: 61  RYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPSANFSLPPSKNNQKNYNNDGGDDDDQGI 120
           RYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPSANFSLPPSKNNQKNYNNDGGDDDDQGI
Sbjct: 61  RYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPSANFSLPPSKNNQKNYNNDGGDDDDQGI 120

Query: 121 SQLNINITSCSSTATTTNTATSCCWLSSDNDHMNNQIMLRSNGIMSQRELIPFIPMPAPA 180
           SQLNINITSCSSTATTTNTATSCCWLSSDNDHMNNQIMLRSNGIMSQRELIPFIPMPAPA
Sbjct: 121 SQLNINITSCSSTATTTNTATSCCWLSSDNDHMNNQIMLRSNGIMSQRELIPFIPMPAPA 180

Query: 181 PPQPTAVAALEDFKQLSTIISTDQNGAKLGDAPAFWSGIFGGGSW 226
           PPQPTAVAALEDFKQLSTIISTDQNGAKLGDAPAFWSGIFGGGSW
Sbjct: 181 PPQPTAVAALEDFKQLSTIISTDQNGAKLGDAPAFWSGIFGGGSW 225

[Close]

BLAST of CSPI03G19620 vs. NCBI nr
Match: XP_008455989.1 (PREDICTED: dof zinc finger protein DOF1.8-like [Cucumis melo] >KAA0050535.1 dof zinc finger protein DOF1.8-like [Cucumis melo var. makuwa] >TYK11276.1 dof zinc finger protein DOF1.8-like [Cucumis melo var. makuwa])

HSP 1 Score: 434.1 bits (1115), Expect = 7.4e-118
Identity = 218/228 (95.61%), Postives = 222/228 (97.37%), Query Frame = 0


Query: 1   MDSAHWPQVEVKNMEL-EEEGLKAVVERKAKARKDQILNCPRCNSNNTKFCYYNNYSLSQ 60
           MDSAHWPQVEVKNM+L EEEG+KAVVERKAKARKDQILNCPRCNSNNTKFCYYNNYSLSQ
Sbjct: 1   MDSAHWPQVEVKNMDLEEEEGIKAVVERKAKARKDQILNCPRCNSNNTKFCYYNNYSLSQ 60

Query: 61  PRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPSANFSLPPSKNNQKNYNNDGGDDDDQG 120
           PRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPSANFSLPPSKNNQKNYNN GG DDDQG
Sbjct: 61  PRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPSANFSLPPSKNNQKNYNNGGGGDDDQG 120

Query: 121 ISQLNINITSCSSTATTTNTATSCCWLSSDNDHMNNQIMLRSNGIMSQRELIPFIPMPAP 180
           ISQLNINITSCSSTATTTNTA +CCWLSSDNDHMNNQIMLRSNGIMSQRELIPFIPMPAP
Sbjct: 121 ISQLNINITSCSSTATTTNTAATCCWLSSDNDHMNNQIMLRSNGIMSQRELIPFIPMPAP 180

Query: 181 APPQPTA--VAALEDFKQLSTIISTDQNGAKLGDAPAFWSGIFGGGSW 226
           APPQPTA  VAALEDFKQLSTIISTDQNGAKLGDAPAFW+GIFGGGSW
Sbjct: 181 APPQPTAVSVAALEDFKQLSTIISTDQNGAKLGDAPAFWNGIFGGGSW 228

[Close]

BLAST of CSPI03G19620 vs. NCBI nr
Match: XP_038895823.1 (dof zinc finger protein DOF4.6-like [Benincasa hispida])

HSP 1 Score: 393.7 bits (1010), Expect = 1.1e-105
Identity = 202/227 (88.99%), Postives = 209/227 (92.07%), Query Frame = 0


Query: 1   MDSAHWPQVEVKNMELEEEGLKAVVERKAKARKDQILNCPRCNSNNTKFCYYNNYSLSQP 60
           MDS+HWPQVEVKNMELEEEG+KAVVERK KARKDQILNCPRCNSNNTKFCYYNNYSL+QP
Sbjct: 1   MDSSHWPQVEVKNMELEEEGIKAVVERKEKARKDQILNCPRCNSNNTKFCYYNNYSLAQP 60

Query: 61  RYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPSANFSLPPSKNNQKNYNNDGGDDDDQGI 120
           RYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPSANFS PPSKNNQKNYNN G DDD Q I
Sbjct: 61  RYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPSANFSSPPSKNNQKNYNN-GDDDDHQDI 120

Query: 121 SQLNINITSCSSTATTTNTATSCCWLSSDNDHMNNQIMLRSNGIMSQRELIPFIPMPAPA 180
           SQLNIN TSCSSTA   NTATSCCWLSSD+ H+NNQIMLRS+GIMSQRELIPFIPMP PA
Sbjct: 121 SQLNINTTSCSSTA--ANTATSCCWLSSDDTHVNNQIMLRSSGIMSQRELIPFIPMPTPA 180

Query: 181 PPQPTAVA-ALEDFKQLSTIISTDQN-GAKLGDAPAFWSGIFGGGSW 226
           P QPTA A ALEDFKQLSTIISTDQN G KLGD PAFW+GIFGGGSW
Sbjct: 181 PQQPTAAATALEDFKQLSTIISTDQNGGTKLGDVPAFWNGIFGGGSW 224

[Close]

BLAST of CSPI03G19620 vs. NCBI nr
Match: XP_023553431.1 (dof zinc finger protein DOF5.7-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 309.7 bits (792), Expect = 2.1e-80
Identity = 175/243 (72.02%), Postives = 190/243 (78.19%), Query Frame = 0


Query: 1   MDSAHWPQVEVKNMELEEEGLKAVVERKAKARKDQILNCPRCNSNNTKFCYYNNYSLSQP 60
           MDSA WPQVEVK+MELEEEG KA +ERKAK  KDQILNCPRCNSNNTKFCYYNNYSLSQP
Sbjct: 1   MDSARWPQVEVKSMELEEEGRKAGLERKAKPGKDQILNCPRCNSNNTKFCYYNNYSLSQP 60

Query: 61  RYFCKSCRRYWTAGGSLRNIPVGGASRKNKR-PSANFSLPPSKNNQKNYNNDGGDDDDQG 120
           RYFCKSCRRYWTAGGSLRNIPVGGASRKNKR PS NF  PP KNN K+Y ++ GDDDDQG
Sbjct: 61  RYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPPSPNFPSPP-KNNNKDYMSN-GDDDDQG 120

Query: 121 ISQLNINITSCSSTATTTNTATSCCWLSSDNDHMNNQIMLRSNGIMSQRELIPFIPMPAP 180
            SQ +   T C S    TN AT  CWLSSD+  MN+QIM+RS+GIMS RELIPFIPMPAP
Sbjct: 121 NSQSSNINTPCPS---ATNIAT--CWLSSDD--MNDQIMVRSSGIMSPRELIPFIPMPAP 180

Query: 181 APPQPTAVAA----------------LEDFKQLSTIISTD-QNGAKLGDAPAFWSGIFGG 226
           APPQPT   +                +EDFKQL  IISTD QNGAKLG+ PAFW+GI+GG
Sbjct: 181 APPQPTTSTSTAPDACNPSTTLFSTTVEDFKQLPPIISTDHQNGAKLGEVPAFWNGIYGG 234

[Close]

BLAST of CSPI03G19620 vs. NCBI nr
Match: XP_022923076.1 (dof zinc finger protein DOF5.7-like [Cucurbita moschata])

HSP 1 Score: 307.8 bits (787), Expect = 8.0e-80
Identity = 174/243 (71.60%), Postives = 189/243 (77.78%), Query Frame = 0


Query: 1   MDSAHWPQVEVKNMELEEEGLKAVVERKAKARKDQILNCPRCNSNNTKFCYYNNYSLSQP 60
           MDSA WPQVEVK+MELEEEG KA +ERKAK  KDQIL+CPRCNSNNTKFCYYNNYSLSQP
Sbjct: 1   MDSAGWPQVEVKSMELEEEGRKAGLERKAKPGKDQILSCPRCNSNNTKFCYYNNYSLSQP 60

Query: 61  RYFCKSCRRYWTAGGSLRNIPVGGASRKNKR-PSANFSLPPSKNNQKNYNNDGGDDDDQG 120
           RYFCKSCRRYWTAGGSLRNIPVGGASRKNKR PS NF  PP KNN K+Y ++ GDDDDQG
Sbjct: 61  RYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPPSPNFPSPP-KNNNKDYMSN-GDDDDQG 120

Query: 121 ISQLNINITSCSSTATTTNTATSCCWLSSDNDHMNNQIMLRSNGIMSQRELIPFIPMPAP 180
            SQ +   T C S    TN AT  CWLSSD+  MN+QIM+RS+GIMS RELIPFIPMPAP
Sbjct: 121 NSQTSNINTPCPS---ATNIAT--CWLSSDD--MNDQIMVRSSGIMSPRELIPFIPMPAP 180

Query: 181 APPQPTA----------------VAALEDFKQLSTIISTD-QNGAKLGDAPAFWSGIFGG 226
           APPQPT                  A +EDFKQL  IISTD QNG KLG+ PAFW+GI+GG
Sbjct: 181 APPQPTTSTITAPDACNPSTTLFTATVEDFKQLPPIISTDHQNGGKLGEVPAFWNGIYGG 234

[Close]

BLAST of CSPI03G19620 vs. TAIR 10
Match: AT4G24060.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 129.0 bits (323), Expect = 4.7e-30
Identity = 68/113 (60.18%), Postives = 79/113 (69.91%), Query Frame = 0


Query: 1   MDSAHWPQ-VEVKNME--------------LEEEGLKAV-VERKAKARKDQILNCPRCNS 60
           MD+A WPQ + VK +E              L+ +   +V  ERKA+  KDQ +NCPRCNS
Sbjct: 1   MDTAQWPQEIVVKPLEEIVTNTCPKPQPQPLQPQQPPSVGGERKARPEKDQAVNCPRCNS 60

Query: 61  NNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPSANFS 98
            NTKFCYYNNYSL+QPRYFCK CRRYWT GGSLRNIPVGG SRKNKR  ++ S
Sbjct: 61  TNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNIPVGGGSRKNKRSHSSSS 113

[Close]

BLAST of CSPI03G19620 vs. TAIR 10
Match: AT1G64620.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 128.6 bits (322), Expect = 6.2e-30
Identity = 78/147 (53.06%), Postives = 90/147 (61.22%), Query Frame = 0


Query: 1   MDSAHWPQ---VEVKNMELEEEGLK---------AVVERKAKARKDQILNCPRCNSNNTK 60
           MD+A WPQ   V+  N  +    LK           VERKA+  KDQ LNCPRCNS NTK
Sbjct: 1   MDTAKWPQEFVVKPMNEIVTNTCLKQQSNPPSPATPVERKARPEKDQALNCPRCNSLNTK 60

Query: 61  FCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKNKRPSAN--FSLPPSKNNQK 120
           FCYYNNYSL+QPRYFCK CRRYWTAGGSLRNIPVGG  RKNKR S+N   S P S ++ K
Sbjct: 61  FCYYNNYSLTQPRYFCKDCRRYWTAGGSLRNIPVGGGVRKNKRSSSNSSSSSPSSSSSSK 120

Query: 121 NYNNDGGDDDDQGISQLNINITSCSST 134
                  +     +  LN  I   ++T
Sbjct: 121 KPLFANNNTPTPPLPHLNPKIGEAAAT 147

[Close]

BLAST of CSPI03G19620 vs. TAIR 10
Match: AT2G46590.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 121.7 bits (304), Expect = 7.5e-28
Identity = 55/73 (75.34%), Postives = 62/73 (84.93%), Query Frame = 0


Query: 25  VERKAKARKDQILNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGG 84
           V  + KAR  + LNCPRCNS NTKFCYYNNYSL+QPRYFCK CRRYWT GGSLRN+PVGG
Sbjct: 56  VVAERKARPQEKLNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGG 115

Query: 85  ASRKNKRPSANFS 98
           +SRKNKR S++ S
Sbjct: 116 SSRKNKRSSSSSS 128

[Close]

BLAST of CSPI03G19620 vs. TAIR 10
Match: AT2G46590.2 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 121.7 bits (304), Expect = 7.5e-28
Identity = 55/73 (75.34%), Postives = 62/73 (84.93%), Query Frame = 0


Query: 25  VERKAKARKDQILNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGG 84
           V  + KAR  + LNCPRCNS NTKFCYYNNYSL+QPRYFCK CRRYWT GGSLRN+PVGG
Sbjct: 68  VVAERKARPQEKLNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGG 127

Query: 85  ASRKNKRPSANFS 98
           +SRKNKR S++ S
Sbjct: 128 SSRKNKRSSSSSS 140

[Close]

BLAST of CSPI03G19620 vs. TAIR 10
Match: AT3G61850.4 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 120.9 bits (302), Expect = 1.3e-27
Identity = 53/70 (75.71%), Postives = 59/70 (84.29%), Query Frame = 0


Query: 30  KARKDQILNCPRCNSNNTKFCYYNNYSLSQPRYFCKSCRRYWTAGGSLRNIPVGGASRKN 89
           KAR  + +NCPRCNS NTKFCYYNNYSL+QPRYFCK CRRYWT GGSLRN+PVGG+SRKN
Sbjct: 67  KARPQEKVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSSRKN 126

Query: 90  KRPSANFSLP 100
           KR S   + P
Sbjct: 127 KRSSTPLASP 136

The following BLAST results are available for this feature:

BLAST of CSPI03G19620 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LAP8	6.6e-29	60.18	Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana OX=3702 GN=DOF4.6 PE=2 SV...	[more]
Q84JQ8	8.7e-29	53.06	Dof zinc finger protein DOF1.8 OS=Arabidopsis thaliana OX=3702 GN=DOF1.8 PE=2 SV...	[more]
B9F1L8	3.3e-28	73.68	Dof zinc finger protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF2 PE=2 ...	[more]
Q9SXG8	1.3e-27	77.14	Dof zinc finger protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF1 PE=2 ...	[more]
Q9ZPY0	1.1e-26	75.34	Dof zinc finger protein DOF2.5 OS=Arabidopsis thaliana OX=3702 GN=DOF2.5 PE=2 SV...	[more]

BLAST of CSPI03G19620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L9J3	1.5e-124	100.00	Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G238150 PE...	[more]
A0A5D3CLI1	3.6e-118	95.61	Dof zinc finger protein DOF1.8-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3C3F2	3.6e-118	95.61	dof zinc finger protein DOF1.8-like OS=Cucumis melo OX=3656 GN=LOC103496053 PE=4...	[more]
A0A6J1E5U7	3.9e-80	71.60	dof zinc finger protein DOF5.7-like OS=Cucurbita moschata OX=3662 GN=LOC11143085...	[more]
A0A6J1J8T6	5.0e-80	71.19	dof zinc finger protein DOF5.7-like OS=Cucurbita maxima OX=3661 GN=LOC111482784 ...	[more]

BLAST of CSPI03G19620 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146271.1	3.1e-124	100.00	dof zinc finger protein DOF1.8 [Cucumis sativus] >XP_011651310.1 dof zinc finger...	[more]
XP_008455989.1	7.4e-118	95.61	PREDICTED: dof zinc finger protein DOF1.8-like [Cucumis melo] >KAA0050535.1 dof ...	[more]
XP_038895823.1	1.1e-105	88.99	dof zinc finger protein DOF4.6-like [Benincasa hispida]	[more]
XP_023553431.1	2.1e-80	72.02	dof zinc finger protein DOF5.7-like [Cucurbita pepo subsp. pepo]	[more]
XP_022923076.1	8.0e-80	71.60	dof zinc finger protein DOF5.7-like [Cucurbita moschata]	[more]

BLAST of CSPI03G19620 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G24060.1	4.7e-30	60.18	Dof-type zinc finger DNA-binding family protein	[more]
AT1G64620.1	6.2e-30	53.06	Dof-type zinc finger DNA-binding family protein	[more]
AT2G46590.1	7.5e-28	75.34	Dof-type zinc finger DNA-binding family protein	[more]
AT2G46590.2	7.5e-28	75.34	Dof-type zinc finger DNA-binding family protein	[more]
AT3G61850.4	1.3e-27	75.71	Dof-type zinc finger DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 34..91 e-value: 2.0E-33 score: 114.3
IPR003851	Zinc finger, Dof-type	PROSITE	PS01361	ZF_DOF_1	coord: 39..75
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 37..91 score: 29.012367
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 90..119
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..119
None	No IPR available	PANTHER	PTHR31992:SF124	DOF ZINC FINGER PROTEIN DOF1.8	coord: 22..178
None	No IPR available	PANTHER	PTHR31992	DOF ZINC FINGER PROTEIN DOF1.4-RELATED	coord: 22..178

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G19620.1	CSPI03G19620.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding