CSPI03G17940 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI03G17940
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionAutophagy protein 5
LocationChr3: 13600641 .. 13605001 (+)
RNA-Seq ExpressionCSPI03G17940
SyntenyCSPI03G17940
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGTAGCATTATGTAATCCCACACTGCTTACCTGCCCTTTTGTAATTGCATACTATCAATGAAATTATAATTATGTCTCACATAAAAAAAATAGATAATAATAAATTGAGATTGCCCCGAGTGGATCCTTCTCTAATTTCTGTGACTTAGTTGTCAGTTTAGTTTGACAACAATATTTCCATGATTGTTTAGTACGTTAGTATTTACAATTTTAGAAGATCATAGTTTTAGTCATTTATTCAGAATGAACAATCCTGGTAAACGTTTGTGTATCTCATGAAGAATCCGGTTCGTGCTTCTCAGGAATATACCAACTGGTGTACTCTTTGACCTTCTATGTGCAGAACCAGAAAGACCATGGAATCTAACGGTACAATTCTATCTCTTCGTCTTTAAAGTTCAAGCTGCGTTTTCTTAATGTAACTGAGTCCCAATTTCATTTGAATTTAGGTTGAACAAAAATGTATTAATCACTTTATACTCTTGCTCCAAATTAATAATGGTATCAATTTAAACCTTAAACTTTCAAAATAGATCAATTTAGACCCTTCACTAGCGTATTATGGCTTTTTCACTTAATTCAATTTAAAATAAACTCTAAGTCGTCTAAATAAAAATATTATTCTCCAGTTTTGTTGAGGCTCACCCAGGCGCTCGCCTAAGATGAGAGGCGAGGAGAGGGAGGCCATACCGCCTTGCAAATACCCAAGGCGAGCACCTTCAATGATGAGAGGCGAGGAGGTTCTCGCCTTTCTTCTTTTTTATACCATTCTTCAAGTTTTTTGTTTTTCTTCAAATTTTCAAGAATGAAGGTTAGAAGAAAATGGAAGAAGTCATCTTTTTGCTTAGCCATCCATTGGTTGCTTATCAAAAATGATGGAAAGGAAGAAGATCGGTTGGAAATCAGAACGGGAGAAGAGATGTTATGTTCTCTTTTTTTTTAAAAAGAAATTCCTAGAAGAGAATTGAAGGGTTGGCTGCTGGAAATAAAGTAACGTTGGCTGCATGCTAACCGAACTGCCAAATGGCAAAATTTCTACCCCATTACTCAAAAAACTATCTTTTACCCATTTAAAAAGGATTTTTGTTTCTATTTCTTTTGTCAAATATTTTTAGTTAATTTTTCTTAATAATTTTGACTTTTTAACCTTTTTAAAATCTAAGTATTTTTTGTCTATAATTGTCAAAAATAATATTTATTCATTATTTTCTAAAGTGTGCCTTGCTTCAATCGGGAACGCTTTTTTTGTTGCATCTTACCTTAAGGTGATTATAGAGCGTGTCGCCTTAAAGTGCGCCTTGTGCTTTGAAAACACTGTTTTCTCCTATCGTACCAAAGCAATAAGAAAAGTTTATCATGTAATTCTTTCTAACTAGGCATAAAAAATTGAGAAAGAAAATAAGAAAGCCACTCACATTAATGAAATCTGGTACTATTTATTTTATTTAAAAAAATTTCTCTAATATGCTGTTAATCTATGCATTTCCAGAAATCTTACACATACACATGTGACAATTATGTATTTTTAGTTCTAAGTTTGAATCTTAATAGATGGTCAAAACTGATCCACTTAGAACAATTTTGGGTTTAATTGTAATATAACCCCCAAAGTTCAGCGGTATAATTTAATTTTTTTCCAAAAATTTATCAAATGAAAAGGTTTCAAACTTGCCTTTGTTGCACTTGAGGATTAATATATATGTGGATCTGGGTCTTGATTGTGTATCATGTGATTGCTGTTGCATTCCAGAGTATGAGAACCCTAGGTGCGTTAATGATGAATTTAGGATTGGCTGAACTTTTTGTAGGAATGGAATTTCAGCTACTTCAACGTTTCTGTTTAAATCTCTTCTTTCAGTATTGTAACTCAATCCAAAGAAACATTTTAATAAAGTTTCATGGAATCCGGCATACTTTTTAGTCTCTGTCCTTGGAGTATGAACGTAAGAGAAGACAGAAGTAGAAGGCAACTTTTGCTCAGCTTCCAAAAAAAGAACGTCAATATATCCGCACTGCAATTAGACTTCTGTAATTTGTTTCAATGTTTTTAACCTTTGAGAAAAGGGTTAATTGAGCAATTGCCAGGGTTAATTGCACTTCACTACACTAATGTGTAAGAACTTAGCTCTCTAAGCCAAGTGGCTGTCACTCTCTAGCTTAAAGGCAGATACTTCATGGTACAAATCAAACACCTTTTTCACATTTTAGGCTTTTGAGTCTCATTTCCACACACATTGCAGTCAAATGCCGGTTTCCAAATCCCTTAGTTCCTAAATCTAGACTTTCACGTTCCCGTTCCCTATTACCAAATGCTTCTCTAAACATTTTTACCTACCTATGAGTTCAAATACAATATCTACTCTCAAAAATGAATTTGATTCCTGATGTATCTTAGCTAAATCTAAGACTATTTAAATTAGGTATTGCCTTTACTTTCTCATATTTTTTGACTAGTGTGACATGAAAATCATCTCACTTTTTTTAACAGGTACATTTTAGAGGTTATCCAAGACAATTGTTAATTCCTTGTGAAGGTGAAGATAGTATAAAGTGGAGCTTTATTAACTCATTAAAAGAGGTCAGTCGACGGTACTTTTTACTTTCTTGGTTGAATTATAAGTTTAGTCTTTGAACTTTGAGATTTCTAGGAAAGTTTAGGTTGCCATTAAATATAAAATTATAGATCTAATAGATCAGTTCATTCTAAAAAATAATAATTTTTCAAAGACCTGTTAGACACGAGATTAAAAGTTTAAGGACCTATTAACCACAAATTGAGAGTTTTGGGACCTACTAAACTCCTTATATCTTCTTTTTGAATAAATCAGGTCCTTTGAGACACTTTTGAAAGTTAGGGTCTAAATGACACAACCTAAAAATTCTAAGACTAAACTTTTAATTTAACCTATCTTCTTTAAATCCAGTCGAAATCGTTATGATTTCTTCAGGAATACAACTTTGTTTTAAGGCACCAAATGGAGGTAGAAAATAAAAGGTTAAATACCAAGCTTAGTTTTATAACTTCCATGTTTGTGTCTATAGGTCCCTAGACTCTTTAGTTGGTGTTTAATAAATCCCTAAAATTTAAAAATATTAGATAGGCCCTTAAACTTTTAATTTTGTGCTTTAGTAGATTTTTTAATTTTATGTTTGATAGAACATTAAACTTCTAATTGTGTGACCCTACATTTATCAAACCAGAGAGCTATGAGACTTTTGTTATAAGACTCACCAACCAGTCCAGTTAGATATTTACCATCATATATACCGTCGGACCCAATAGATGTTCAATTCTGTCCAACTAGAAGTGCCTTTTACAAAGGCAGAGATCTGGAAGGCAGTCACAAATCTGGCACGAATAAGCTTTTGGGACAATACAGTTTTACAGTGGAGTTCTTCTAGAATGCCTAGATCAACATCCTTAGAGTGTTCCATTTTTTTCCAGAATTCTATCATCAATGTTGGGCTTAAGAGGAGACTCATATTTACCTCACTCTCAAGAAATTGGATCCCAAATAAGTGGGGGACTATAGGCATATAAGTCTTGCATCTTGTTGATACAAATCATTACAGGGGTTCTCACTGATAAACTGAAATGTGTGCTGCCATGTTCTTTTTGCAAAAGTCAATTGGCCTTGTGGTCGGTTGACAAATCCCTGATGCTTCCTTCATTGCAAACAAGCTCATTGAGCATCCTTGTAAATCCTTGTAAGAGCAAAAAGGACAATTTTATCATTTAATCAGATTTGGAGAAACTGAAAGCTTTGGTGAGTTTGTTTGGGCATTTGTGTATGAGGTTCTAAAGGCCAAGGGGGTTTGAAACAGAAAGGAGTGGATGGACAAAGAGCTGTATGTCTTCTACAAACCTCGCTATCATCAAAAGTAGCAAACCTAGAGGCAAAATCTTAGCATCTCTTTGAAAATTCAATTATTATTCATTGTTATGATTGTTATTTATACGATCGTGATCTTGCTCTTGTTGTATAATTTTAATTTGGCTTTTAGCAATTTAATGATATTTGGTCAAAGAGAGATTTTTGACAAGTTGACCTAGGGATGTTCATTATGGTTAGGCGGATTACATTATCAATGGGAACACCAAGAATGTCATGAGCATGTCGGAACCTGATCTGTTGGAGTTATGGCGTTCTGTATCCAATGGTATGCTAGCAAGTGCAGTAGTACCTTGGTTTTACAAATTAAATCAATAGTTTATCAATGTGAAATGATGATGACTTGATTGCACCTTAGTTTAGCTTCCATAATTTTGCACTTCTAAGTTACTATTGCAATATTATTTTGTAATTTGCAGTTCAATTATTTTTGTGATATAATTAATTTTGCAGCCTTCAATTAA

mRNA sequence

ATGGCGAATATACCAACTGGTGTACTCTTTGACCTTCTATGTGCAGAACCAGAAAGACCATGGAATCTAACGGTACATTTTAGAGGTTATCCAAGACAATTGTTAATTCCTTGTGAAGGTGAAGATAGTATAAAGTGGAGCTTTATTAACTCATTAAAAGAGGCGGATTACATTATCAATGGGAACACCAAGAATGTCATGAGCATGTCGGAACCTGATCTGTTGGAGTTATGGCGTTCTGTATCCAATGCCTTCAATTAA

Coding sequence (CDS)

ATGGCGAATATACCAACTGGTGTACTCTTTGACCTTCTATGTGCAGAACCAGAAAGACCATGGAATCTAACGGTACATTTTAGAGGTTATCCAAGACAATTGTTAATTCCTTGTGAAGGTGAAGATAGTATAAAGTGGAGCTTTATTAACTCATTAAAAGAGGCGGATTACATTATCAATGGGAACACCAAGAATGTCATGAGCATGTCGGAACCTGATCTGTTGGAGTTATGGCGTTCTGTATCCAATGCCTTCAATTAA

Protein sequence

MANIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGNTKNVMSMSEPDLLELWRSVSNAFN*
Homology
[Close]
BLAST of CSPI03G17940 vs. ExPASy Swiss-Prot
Match: Q9FFI2 (Autophagy protein 5 OS=Arabidopsis thaliana OX=3702 GN=ATG5 PE=2 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 4.1e-35
Identity = 63/80 (78.75%), Postives = 71/80 (88.75%), Query Frame = 0 

Query: 4   IPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGNT 63
           IPTGVLFDLLCAEPERPWNLT+HFRGYP  +LIPCEGEDS+KW+F+NSLKEA YIINGN 
Sbjct: 79  IPTGVLFDLLCAEPERPWNLTIHFRGYPCNILIPCEGEDSVKWNFVNSLKEAQYIINGNC 138

Query: 64  KNVMSMSEPDLLELWRSVSN 84
           KNVM+MS+ D  +LW SV N
Sbjct: 139 KNVMNMSQSDQEDLWTSVMN 158

[Close]
BLAST of CSPI03G17940 vs. ExPASy Swiss-Prot
Match: A2X052 (Autophagy protein 5 OS=Oryza sativa subsp. indica OX=39946 GN=ATG5 PE=3 SV=2)

HSP 1 Score: 135.6 bits (340), Expect = 2.7e-31
Identity = 56/78 (71.79%), Postives = 69/78 (88.46%), Query Frame = 0 

Query: 4   IPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGNT 63
           IP GVL+DLLCA+PERPWNLTVHFRGYP ++L PC+GEDS+KWS++NSLKEA +II GN+
Sbjct: 89  IPIGVLYDLLCADPERPWNLTVHFRGYPSEILTPCDGEDSVKWSYMNSLKEAAFIITGNS 148

Query: 64  KNVMSMSEPDLLELWRSV 82
           KNVM+MS+ D   LW+SV
Sbjct: 149 KNVMNMSQADQGALWQSV 166

[Close]
BLAST of CSPI03G17940 vs. ExPASy Swiss-Prot
Match: Q6ZGL4 (Autophagy protein 5 OS=Oryza sativa subsp. japonica OX=39947 GN=ATG5 PE=2 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 3.9e-30
Identity = 55/78 (70.51%), Postives = 68/78 (87.18%), Query Frame = 0 

Query: 4   IPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGNT 63
           IP GVL+DLLCA+PERPWNLTVHFRGYP ++L  C+GEDS+KWS++NSLKEA +II GN+
Sbjct: 89  IPIGVLYDLLCADPERPWNLTVHFRGYPSEILTLCDGEDSVKWSYMNSLKEAAFIITGNS 148

Query: 64  KNVMSMSEPDLLELWRSV 82
           KNVM+MS+ D   LW+SV
Sbjct: 149 KNVMNMSQADQGALWQSV 166

[Close]
BLAST of CSPI03G17940 vs. ExPASy Swiss-Prot
Match: Q9H1Y0 (Autophagy protein 5 OS=Homo sapiens OX=9606 GN=ATG5 PE=1 SV=2)

HSP 1 Score: 70.9 bits (172), Expect = 8.3e-12
Identity = 29/79 (36.71%), Postives = 49/79 (62.03%), Query Frame = 0 

Query: 5   PTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGNTK 64
           P G+LFDLL +    PWN+TVHF+ +P + L+ C  +D+I+  F++ +KEAD  +   ++
Sbjct: 82  PIGLLFDLLASSSALPWNITVHFKSFPEKDLLHCPSKDAIEAHFMSCMKEAD-ALKHKSQ 141

Query: 65  NVMSMSEPDLLELWRSVSN 84
            +  M + D  +LW  + N
Sbjct: 142 VINEMQKKDHKQLWMGLQN 159

[Close]
BLAST of CSPI03G17940 vs. ExPASy Swiss-Prot
Match: Q5R792 (Autophagy protein 5 OS=Pongo abelii OX=9601 GN=ATG5 PE=2 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 8.3e-12
Identity = 29/79 (36.71%), Postives = 49/79 (62.03%), Query Frame = 0 

Query: 5   PTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGNTK 64
           P G+LFDLL +    PWN+TVHF+ +P + L+ C  +D+I+  F++ +KEAD  +   ++
Sbjct: 82  PIGLLFDLLASSSALPWNITVHFKSFPEKDLLHCPSKDAIEAHFMSCMKEAD-ALKHKSQ 141

Query: 65  NVMSMSEPDLLELWRSVSN 84
            +  M + D  +LW  + N
Sbjct: 142 VINEMQKKDHKQLWMGLQN 159

[Close]
BLAST of CSPI03G17940 vs. ExPASy TrEMBL
Match: A0A5A7T773 (Autophagy protein 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold379G001340 PE=3 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 8.0e-42
Identity = 80/81 (98.77%), Postives = 81/81 (100.00%), Query Frame = 0 

Query: 3   NIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGN 62
           NIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYI+NGN
Sbjct: 76  NIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIVNGN 135

Query: 63  TKNVMSMSEPDLLELWRSVSN 84
           TKNVMSMSEPDLLELWRSVSN
Sbjct: 136 TKNVMSMSEPDLLELWRSVSN 156

[Close]
BLAST of CSPI03G17940 vs. ExPASy TrEMBL
Match: A0A1S3C294 (Autophagy protein 5 OS=Cucumis melo OX=3656 GN=LOC103496203 PE=3 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 8.0e-42
Identity = 80/81 (98.77%), Postives = 81/81 (100.00%), Query Frame = 0 

Query: 3   NIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGN 62
           NIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYI+NGN
Sbjct: 76  NIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIVNGN 135

Query: 63  TKNVMSMSEPDLLELWRSVSN 84
           TKNVMSMSEPDLLELWRSVSN
Sbjct: 136 TKNVMSMSEPDLLELWRSVSN 156

[Close]
BLAST of CSPI03G17940 vs. ExPASy TrEMBL
Match: A0A6J1IXC8 (Autophagy protein 5 OS=Cucurbita maxima OX=3661 GN=LOC111481509 PE=3 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 2.0e-40
Identity = 77/82 (93.90%), Postives = 81/82 (98.78%), Query Frame = 0 

Query: 3   NIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGN 62
           +IPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYI+NGN
Sbjct: 76  HIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIVNGN 135

Query: 63  TKNVMSMSEPDLLELWRSVSNA 85
           TKNVMSMS+PDL+ELWRSV NA
Sbjct: 136 TKNVMSMSQPDLVELWRSVLNA 157

[Close]
BLAST of CSPI03G17940 vs. ExPASy TrEMBL
Match: A0A6J1J5M0 (Autophagy protein 5 OS=Cucurbita maxima OX=3661 GN=LOC111481509 PE=3 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 7.4e-40
Identity = 76/81 (93.83%), Postives = 80/81 (98.77%), Query Frame = 0 

Query: 3   NIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGN 62
           +IPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYI+NGN
Sbjct: 76  HIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIVNGN 135

Query: 63  TKNVMSMSEPDLLELWRSVSN 84
           TKNVMSMS+PDL+ELWRSV N
Sbjct: 136 TKNVMSMSQPDLVELWRSVLN 156

[Close]
BLAST of CSPI03G17940 vs. ExPASy TrEMBL
Match: A0A6J1F9G3 (Autophagy protein 5 OS=Cucurbita moschata OX=3662 GN=LOC111442026 PE=3 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.3e-39
Identity = 76/82 (92.68%), Postives = 80/82 (97.56%), Query Frame = 0 

Query: 3   NIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGN 62
           +IPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYI+NGN
Sbjct: 76  HIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIVNGN 135

Query: 63  TKNVMSMSEPDLLELWRSVSNA 85
           TKNVMSMS+PDL+ LWRSV NA
Sbjct: 136 TKNVMSMSQPDLVVLWRSVLNA 157

[Close]
BLAST of CSPI03G17940 vs. NCBI nr
Match: XP_004140815.1 (autophagy protein 5 isoform X2 [Cucumis sativus])

HSP 1 Score: 179.5 bits (454), Expect = 1.3e-41
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0 

Query: 3   NIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGN 62
           NIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGN
Sbjct: 76  NIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGN 135

Query: 63  TKNVMSMSEPDLLELWRSVSN 84
           TKNVMSMSEPDLLELWRSVSN
Sbjct: 136 TKNVMSMSEPDLLELWRSVSN 156

[Close]
BLAST of CSPI03G17940 vs. NCBI nr
Match: XP_031739164.1 (autophagy protein 5 isoform X1 [Cucumis sativus] >KAE8650491.1 hypothetical protein Csa_009525 [Cucumis sativus])

HSP 1 Score: 179.5 bits (454), Expect = 1.3e-41
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0 

Query: 3   NIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGN 62
           NIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGN
Sbjct: 76  NIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGN 135

Query: 63  TKNVMSMSEPDLLELWRSVSN 84
           TKNVMSMSEPDLLELWRSVSN
Sbjct: 136 TKNVMSMSEPDLLELWRSVSN 156

[Close]
BLAST of CSPI03G17940 vs. NCBI nr
Match: XP_008456193.1 (PREDICTED: autophagy protein 5 isoform X1 [Cucumis melo] >KAA0037219.1 autophagy protein 5 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 179.1 bits (453), Expect = 1.6e-41
Identity = 80/81 (98.77%), Postives = 81/81 (100.00%), Query Frame = 0 

Query: 3   NIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGN 62
           NIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYI+NGN
Sbjct: 76  NIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIVNGN 135

Query: 63  TKNVMSMSEPDLLELWRSVSN 84
           TKNVMSMSEPDLLELWRSVSN
Sbjct: 136 TKNVMSMSEPDLLELWRSVSN 156

[Close]
BLAST of CSPI03G17940 vs. NCBI nr
Match: XP_038906792.1 (autophagy protein 5 isoform X1 [Benincasa hispida])

HSP 1 Score: 176.0 bits (445), Expect = 1.4e-40
Identity = 78/82 (95.12%), Postives = 81/82 (98.78%), Query Frame = 0 

Query: 3   NIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGN 62
           NIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKW FINSLKEA+YI+NGN
Sbjct: 76  NIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWCFINSLKEANYIVNGN 135

Query: 63  TKNVMSMSEPDLLELWRSVSNA 85
           TKNVMSMSEPDL+ELWRSVSNA
Sbjct: 136 TKNVMSMSEPDLVELWRSVSNA 157

[Close]
BLAST of CSPI03G17940 vs. NCBI nr
Match: XP_022982727.1 (autophagy protein 5 isoform X1 [Cucurbita maxima])

HSP 1 Score: 174.5 bits (441), Expect = 4.0e-40
Identity = 77/82 (93.90%), Postives = 81/82 (98.78%), Query Frame = 0 

Query: 3   NIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGN 62
           +IPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYI+NGN
Sbjct: 76  HIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIVNGN 135

Query: 63  TKNVMSMSEPDLLELWRSVSNA 85
           TKNVMSMS+PDL+ELWRSV NA
Sbjct: 136 TKNVMSMSQPDLVELWRSVLNA 157

[Close]
BLAST of CSPI03G17940 vs. TAIR 10
Match: AT5G17290.1 (autophagy protein Apg5 family )

HSP 1 Score: 148.3 bits (373), Expect = 2.9e-36
Identity = 63/80 (78.75%), Postives = 71/80 (88.75%), Query Frame = 0 

Query: 4   IPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGNT 63
           IPTGVLFDLLCAEPERPWNLT+HFRGYP  +LIPCEGEDS+KW+F+NSLKEA YIINGN 
Sbjct: 79  IPTGVLFDLLCAEPERPWNLTIHFRGYPCNILIPCEGEDSVKWNFVNSLKEAQYIINGNC 138

Query: 64  KNVMSMSEPDLLELWRSVSN 84
           KNVM+MS+ D  +LW SV N
Sbjct: 139 KNVMNMSQSDQEDLWTSVMN 158

The following BLAST results are available for this feature:
BLAST of CSPI03G17940 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FFI24.1e-3578.75Autophagy protein 5 OS=Arabidopsis thaliana OX=3702 GN=ATG5 PE=2 SV=1[more]
A2X0522.7e-3171.79Autophagy protein 5 OS=Oryza sativa subsp. indica OX=39946 GN=ATG5 PE=3 SV=2[more]
Q6ZGL43.9e-3070.51Autophagy protein 5 OS=Oryza sativa subsp. japonica OX=39947 GN=ATG5 PE=2 SV=1[more]
Q9H1Y08.3e-1236.71Autophagy protein 5 OS=Homo sapiens OX=9606 GN=ATG5 PE=1 SV=2[more]
Q5R7928.3e-1236.71Autophagy protein 5 OS=Pongo abelii OX=9601 GN=ATG5 PE=2 SV=1[more]
BLAST of CSPI03G17940 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7T7738.0e-4298.77Autophagy protein 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold379G... [more]
A0A1S3C2948.0e-4298.77Autophagy protein 5 OS=Cucumis melo OX=3656 GN=LOC103496203 PE=3 SV=1[more]
A0A6J1IXC82.0e-4093.90Autophagy protein 5 OS=Cucurbita maxima OX=3661 GN=LOC111481509 PE=3 SV=1[more]
A0A6J1J5M07.4e-4093.83Autophagy protein 5 OS=Cucurbita maxima OX=3661 GN=LOC111481509 PE=3 SV=1[more]
A0A6J1F9G31.3e-3992.68Autophagy protein 5 OS=Cucurbita moschata OX=3662 GN=LOC111442026 PE=3 SV=1[more]
BLAST of CSPI03G17940 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004140815.11.3e-41100.00autophagy protein 5 isoform X2 [Cucumis sativus][more]
XP_031739164.11.3e-41100.00autophagy protein 5 isoform X1 [Cucumis sativus] >KAE8650491.1 hypothetical prot... [more]
XP_008456193.11.6e-4198.77PREDICTED: autophagy protein 5 isoform X1 [Cucumis melo] >KAA0037219.1 autophagy... [more]
XP_038906792.11.4e-4095.12autophagy protein 5 isoform X1 [Benincasa hispida][more]
XP_022982727.14.0e-4093.90autophagy protein 5 isoform X1 [Cucurbita maxima][more]
BLAST of CSPI03G17940 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G17290.12.9e-3678.75autophagy protein Apg5 family [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007239Autophagy-related protein 5PFAMPF04106APG5coord: 3..83
e-value: 3.6E-30
score: 105.2
IPR007239Autophagy-related protein 5PANTHERPTHR13040AUTOPHAGY PROTEIN 5coord: 3..83
IPR042527Autophagy protein Atg5, UblA domainGENE3D3.10.20.620coord: 1..35
e-value: 3.5E-9
score: 38.8
IPR042526Autophagy protein Atg5, helix rich domainGENE3D1.10.246.190Autophagy protein Apg5, helix rich domaincoord: 36..86
e-value: 1.1E-24
score: 87.8

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G17940.1CSPI03G17940.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006914 autophagy
biological_process GO:0006749 glutathione metabolic process
cellular_component GO:0005737 cytoplasm
molecular_function GO:0004364 glutathione transferase activity