CSPI03G17660 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI03G17660
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionDYW_deaminase domain-containing protein
LocationChr3: 13240395 .. 13241017 (-)
RNA-Seq ExpressionCSPI03G17660
SyntenyCSPI03G17660
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGTCGTTTTCCGCTTTACCTCGACACAGCTTCGCCTCGACCTCAGCGTTGTCATCGGTACGCCTCTTTCTCGCCGATCTCACCTTTGCTGCCTCGCCGCCGTGGCTTCCGTCTTCAGCGTCCGGGTTCTAATCTTCGAGTGCAAGTCGTCTAATCTGATAGAAGAGTGTTTTTTCTATTTCCAGTTTTTGTATGTTGAACTCGGTAAAGGAAACCATTGGTGTCTTATCTTTCATTTTTTATTTAAAAGTACAATTTCTATGAAGATTTTGTTGGGTGAATGTAAGTGTTGGACTTGGAATTCAGTGGATATTTAAACTAGTGTGCTAAAACATGTTTATATATGTGTTACAGATTGCTGAAGCTCATGGCCCCGTCAAGAAAGTCCAGAAGTGTTAATAAGGGTTTTCTTCTGCTAATGAGGTATCCTCAAGCAAACACGTGGAAGATGCCAGCAAAAGCAAGCAGAAGGTATGTGTGTTTGTGGTGGAAGATGGCTTTTCCAAGATTTGTTCAGTCTGTCGACTTTCCATTTGCTTCAATATGAAAAATATTATATTTCGTCGTTTTAATTTAGAATTTGGGTTACTATTTTCATCGTGTTACAGGCTATCTTGAAG

mRNA sequence

ATGACGTCGTTTTCCGCTTTACCTCGACACAGCTTCGCCTCGACCTCAGCGTTGTCATCGGTACGCCTCTTTCTCGCCGATCTCACCTTTGCTGCCTCGCCGCCGTGGCTTCCGTCTTCAGCGTCCGGATTGCTGAAGCTCATGGCCCCGTCAAGAAAGTCCAGAAGTGTTAATAAGGGTTTTCTTCTGCTAATGAGGTATCCTCAAGCAAACACGTGGAAGATGCCAGCAAAAGCAAGCAGAAGAATTTGGGTTACTATTTTCATCGTGTTACAGGCTATCTTGAAG

Coding sequence (CDS)

ATGACGTCGTTTTCCGCTTTACCTCGACACAGCTTCGCCTCGACCTCAGCGTTGTCATCGGTACGCCTCTTTCTCGCCGATCTCACCTTTGCTGCCTCGCCGCCGTGGCTTCCGTCTTCAGCGTCCGGATTGCTGAAGCTCATGGCCCCGTCAAGAAAGTCCAGAAGTGTTAATAAGGGTTTTCTTCTGCTAATGAGGTATCCTCAAGCAAACACGTGGAAGATGCCAGCAAAAGCAAGCAGAAGAATTTGGGTTACTATTTTCATCGTGTTACAGGCTATCTTGAAG

Protein sequence

MTSFSALPRHSFASTSALSSVRLFLADLTFAASPPWLPSSASGLLKLMAPSRKSRSVNKGFLLLMRYPQANTWKMPAKASRRIWVTIFIVLQAILK
Homology
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BLAST of CSPI03G17660 vs. ExPASy TrEMBL
Match: A0A0A0L8Y7 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G187240 PE=3 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 8.0e-35
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0 

Query: 1  MTSFSALPRHSFASTSALSSVRLFLADLTFAASPPWLPSSASGLLKLMAPSRKSRSVNKG 60
          MTSFSALPRHSFASTSALSSVRLFLADLTFAASPPWLPSSASGLLKLMAPSRKSRSVNKG
Sbjct: 1  MTSFSALPRHSFASTSALSSVRLFLADLTFAASPPWLPSSASGLLKLMAPSRKSRSVNKG 60

Query: 61 FLLLMRYPQANTWKMPAKASR 82
          FLLLMRYPQANTWKMPAKASR
Sbjct: 61 FLLLMRYPQANTWKMPAKASR 81

The following BLAST results are available for this feature:
BLAST of CSPI03G17660 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI03G17660 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L8Y78.0e-35100.00DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G1872... [more]
BLAST of CSPI03G17660 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
BLAST of CSPI03G17660 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G17660.1CSPI03G17660.1mRNA