CSPI03G14010 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G14010
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	DNA ligase 1-like
Location	Chr3: 10538121 .. 10539904 (+)
RNA-Seq Expression	CSPI03G14010
Synteny	CSPI03G14010

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAAATCCGCCATTATCTCGAGCTTGAAACAAAAGGCAGCGAGAAAGACGGGTGTGTAATGGCTATGGAGAGTCATCCCCTAACCAACCTATTTTCCCTCATTGTAAACTATAAAACAAATCAACCAACTACCAGCATTCCTTCCAACGAATCAACTTTTCGCTTCTTCGCTGTCGCCTCTCATTCGATCTCTCCCCTCCCTGTTCTTAAACCGGGAGAGATCTATTCCATTTTCCATCCAATTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCCTCCTCCTCCCTCCATTTTCCTCTATCAATGGGTTGCGGAGAGTCCAAGCTTGCTATCGACACCGCCGACGGCATTCTCCACCGCAAGAAATCATCCGCTAGTCGATCTAAGAGCGGACGAAGAGCAGGTGATGAATCCAAGACCAGTACTGCCCATTCCTCTAGTGCTGATTTGAAGGTTCCGTCTCTGAACAAAATCGATAGCTCTGTCAAGGTTGAATCCTCCGAGAATAAGGTAGAGCAGCGAGATGAGAAGAAGATCGATGATGTTGCGAAGATTGAACCGGAGGTTAAGACAGAGCAGAAGATCGATGCCGCTGTGAAGATTGAATCGGAGGAGAAGAGCGATAGCATTGTGGTGACGGAAGGAGTGAAAACAGAGGAGAGAAAGGAGAAGGAGGTTGCCGGCGACAGTGAGAAGAAGGAGAAGGAGGTCGCCAGCAGCAGTGAGAAGAAGGAGAATGAGGACGGAGGGAATGGCGGTTCTGTTGAAAAACAGGTGGCTGGAGAAACGAAAGCAGAGGAGAAGAAGGAGGGCAGTGAAGTTAAGGTAGAACAGGGAGTTAAAGGTGTTGAGGAAAAACTGCTGGCTGGAGAAGTTGAAAAGGAAGGAATTAAAGCTGTAGAGAAAAAGGAGGTGGCCGGAGAAACGAAAACGGAGAAGAAGGAAGGTGGCGCTGTTGAAGAAGGAATCAAAGCTGCAGAGGAAAAAAAATTGGCTGAAGAACCCAAAGTAGAGAAGCAAAATGGTCAGTAAAACTTTGACACTCACAACTAATTTATTACATAAAATTTGGAATGAAAATGACAAAACGATTGAAAATAATTACAACAAAATGGCAACATATTTGATTTCACAAGCATAACTCAAGTTACAAAATTATTACTTTCAAAGTTCAGAGTTTTGATTCTTCCAACAGAAAATCAAACTTATTTTATCTGTAAATAGTTTGAATGAACTAAAAAAAATTGACATATGATTTAAAAGTTGTAAAAGTCTAAAAAAAGTAGTTTGTGTGGACAGGAGAGGCAGTGAAATTGAAGGAAGAAAGTGAAGGTAAGAAGGAAGAAACCCAAATCTCAGCACCCACTCCACTACAAGACAAGAATCTCAAAGATCCCAAGGTTTGCTATTCACAAAACTCTTATAAAATCTTCTTAGCATTCTTCTCACATTATTACCTATTTCTTTCTTATATATATAGAATAATAAGAAGAAGAAGAAAAGTAACTAAAGAATGCTATTGATGAATTGATGCAGGAAAATGGAGGTGATTTGGAAGTGAAGAACTCAACAACAGAGGAAAAGAAAATAGCACCAACCAACTAAGTGATAAAATGATTTTGTGGCCAAATTGAAAGATGATTGGAGAAATAGTTATATATATTTACACAAACACACACATATGATACAAAAGAAATGTTAATGATTTTTATTGTCTAAATAAGAACTCAATAACAAGTTCAAATGATTTATACTTACTAACAAGAGAG

mRNA sequence

ATGGAAGAAATCCGCCATTATCTCGAGCTTGAAACAAAAGGCAGCGAGAAAGACGGGTGTGTAATGGCTATGGAGAGTCATCCCCTAACCAACCTATTTTCCCTCATTGTAAACTATAAAACAAATCAACCAACTACCAGCATTCCTTCCAACGAATCAACTTTTCGCTTCTTCGCTGTCGCCTCTCATTCGATCTCTCCCCTCCCTGTTCTTAAACCGGGAGAGATCTATTCCATTTTCCATCCAATTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCCTCCTCCTCCCTCCATTTTCCTCTATCAATGGGTTGCGGAGAGTCCAAGCTTGCTATCGACACCGCCGACGGCATTCTCCACCGCAAGAAATCATCCGCTAGTCGATCTAAGAGCGGACGAAGAGCAGGTGATGAATCCAAGACCAGTACTGCCCATTCCTCTAGTGCTGATTTGAAGGTTCCGTCTCTGAACAAAATCGATAGCTCTGTCAAGGTTGAATCCTCCGAGAATAAGGTAGAGCAGCGAGATGAGAAGAAGATCGATGATGTTGCGAAGATTGAACCGGAGGTTAAGACAGAGCAGAAGATCGATGCCGCTGTGAAGATTGAATCGGAGGAGAAGAGCGATAGCATTGTGGTGACGGAAGGAGTGAAAACAGAGGAGAGAAAGGAGAAGGAGGTTGCCGGCGACAGTGAGAAGAAGGAGAAGGAGGTCGCCAGCAGCAGTGAGAAGAAGGAGAATGAGGACGGAGGGAATGGCGGTTCTGTTGAAAAACAGGTGGCTGGAGAAACGAAAGCAGAGGAGAAGAAGGAGGGCAGTGAAGTTAAGGTAGAACAGGGAGTTAAAGGTGTTGAGGAAAAACTGCTGGCTGGAGAAGTTGAAAAGGAAGGAATTAAAGCTGTAGAGAAAAAGGAGGTGGCCGGAGAAACGAAAACGGAGAAGAAGGAAGGTGGCGCTGTTGAAGAAGGAATCAAAGCTGCAGAGGAAAAAAAATTGGCTGAAGAACCCAAAGTAGAGAAGCAAAATGGAGAGGCAGTGAAATTGAAGGAAGAAAGTGAAGGTAAGAAGGAAGAAACCCAAATCTCAGCACCCACTCCACTACAAGACAAGAATCTCAAAGATCCCAAGGAAAATGGAGGTGATTTGGAAGTGAAGAACTCAACAACAGAGGAAAAGAAAATAGCACCAACCAACTAAGTGATAAAATGATTTTGTGGCCAAATTGAAAGATGATTGGAGAAATAGTTATATATATTTACACAAACACACACATATGATACAAAAGAAATGTTAATGATTTTTATTGTCTAAATAAGAACTCAATAACAAGTTCAAATGATTTATACTTACTAACAAGAGAG

Coding sequence (CDS)

ATGGAAGAAATCCGCCATTATCTCGAGCTTGAAACAAAAGGCAGCGAGAAAGACGGGTGTGTAATGGCTATGGAGAGTCATCCCCTAACCAACCTATTTTCCCTCATTGTAAACTATAAAACAAATCAACCAACTACCAGCATTCCTTCCAACGAATCAACTTTTCGCTTCTTCGCTGTCGCCTCTCATTCGATCTCTCCCCTCCCTGTTCTTAAACCGGGAGAGATCTATTCCATTTTCCATCCAATTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCCTCCTCCTCCCTCCATTTTCCTCTATCAATGGGTTGCGGAGAGTCCAAGCTTGCTATCGACACCGCCGACGGCATTCTCCACCGCAAGAAATCATCCGCTAGTCGATCTAAGAGCGGACGAAGAGCAGGTGATGAATCCAAGACCAGTACTGCCCATTCCTCTAGTGCTGATTTGAAGGTTCCGTCTCTGAACAAAATCGATAGCTCTGTCAAGGTTGAATCCTCCGAGAATAAGGTAGAGCAGCGAGATGAGAAGAAGATCGATGATGTTGCGAAGATTGAACCGGAGGTTAAGACAGAGCAGAAGATCGATGCCGCTGTGAAGATTGAATCGGAGGAGAAGAGCGATAGCATTGTGGTGACGGAAGGAGTGAAAACAGAGGAGAGAAAGGAGAAGGAGGTTGCCGGCGACAGTGAGAAGAAGGAGAAGGAGGTCGCCAGCAGCAGTGAGAAGAAGGAGAATGAGGACGGAGGGAATGGCGGTTCTGTTGAAAAACAGGTGGCTGGAGAAACGAAAGCAGAGGAGAAGAAGGAGGGCAGTGAAGTTAAGGTAGAACAGGGAGTTAAAGGTGTTGAGGAAAAACTGCTGGCTGGAGAAGTTGAAAAGGAAGGAATTAAAGCTGTAGAGAAAAAGGAGGTGGCCGGAGAAACGAAAACGGAGAAGAAGGAAGGTGGCGCTGTTGAAGAAGGAATCAAAGCTGCAGAGGAAAAAAAATTGGCTGAAGAACCCAAAGTAGAGAAGCAAAATGGAGAGGCAGTGAAATTGAAGGAAGAAAGTGAAGGTAAGAAGGAAGAAACCCAAATCTCAGCACCCACTCCACTACAAGACAAGAATCTCAAAGATCCCAAGGAAAATGGAGGTGATTTGGAAGTGAAGAACTCAACAACAGAGGAAAAGAAAATAGCACCAACCAACTAA

Protein sequence

MEEIRHYLELETKGSEKDGCVMAMESHPLTNLFSLIVNYKTNQPTTSIPSNESTFRFFAVASHSISPLPVLKPGEIYSIFHPISSSSSSSSSSSSSSSSSLHFPLSMGCGESKLAIDTADGILHRKKSSASRSKSGRRAGDESKTSTAHSSSADLKVPSLNKIDSSVKVESSENKVEQRDEKKIDDVAKIEPEVKTEQKIDAAVKIESEEKSDSIVVTEGVKTEERKEKEVAGDSEKKEKEVASSSEKKENEDGGNGGSVEKQVAGETKAEEKKEGSEVKVEQGVKGVEEKLLAGEVEKEGIKAVEKKEVAGETKTEKKEGGAVEEGIKAAEEKKLAEEPKVEKQNGEAVKLKEESEGKKEETQISAPTPLQDKNLKDPKENGGDLEVKNSTTEEKKIAPTN*

Homology

[Close]

BLAST of CSPI03G14010 vs. ExPASy TrEMBL
Match: A0A0A0L8Y3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G152040 PE=4 SV=1)

HSP 1 Score: 674.5 bits (1739), Expect = 2.8e-190
Identity = 395/413 (95.64%), Postives = 395/413 (95.64%), Query Frame = 0


Query: 1   MEEIRHYLELETKGSEKDGCVMAMESHPLTNLFSLIVNYKTNQPTTSIPSNESTFRFFAV 60
           MEEIRHYLELETKGSEKDGCVMAMESHPLTNLFSLIVNYKTNQPTTSIPSNESTFRFFAV
Sbjct: 1   MEEIRHYLELETKGSEKDGCVMAMESHPLTNLFSLIVNYKTNQPTTSIPSNESTFRFFAV 60

Query: 61  ASHSISPLPVLKPGEIYSIFHPISSSSSSSSSSSSSSSSSLHFPLSMGCGESKLAIDTAD 120
           ASHSISPLPVLKPGEIYSIFHPI      SSSSSSSSSSSLHFPLSMGCGESKLAIDTAD
Sbjct: 61  ASHSISPLPVLKPGEIYSIFHPI------SSSSSSSSSSSLHFPLSMGCGESKLAIDTAD 120

Query: 121 GILHRKKSSASRSKSGRRAGDESKTSTAHSSSADLKVPSLNKIDSSVKVESSENKVEQRD 180
           GILHRKKSSASRSKSGRRAGD SKTSTAHSSSADLKVPSLNKIDSSVKVESSENKVEQRD
Sbjct: 121 GILHRKKSSASRSKSGRRAGDGSKTSTAHSSSADLKVPSLNKIDSSVKVESSENKVEQRD 180

Query: 181 EKKIDDVAKIEPEVKTEQKIDAAVKIESEEKSDSIVVTEGVKTEERKEKEVAGD------ 240
           EKKIDDVAKIEPEVKTEQKIDAAVKIESEEKSDSIVVTEGVKTEERKEKEVAGD      
Sbjct: 181 EKKIDDVAKIEPEVKTEQKIDAAVKIESEEKSDSIVVTEGVKTEERKEKEVAGDSEKKEK 240

Query: 241 -----SEKKEKEVASSSEKKENEDGGNGGSVEKQVAGETKAEEKKEGSEVKVEQGVKGVE 300
                SEKKEKEVASSSEKKENEDGGNGGSVEKQVAGETKAEEKKEGSEVKVEQGVKGVE
Sbjct: 241 EVASSSEKKEKEVASSSEKKENEDGGNGGSVEKQVAGETKAEEKKEGSEVKVEQGVKGVE 300

Query: 301 EKLLAGEVEKEGIKAVEKKEVAGETKTEKKEGGAVEEGIKAAEEKKLAEEPKVEKQNGEA 360
           EKLLAGEVEKEGIKAVEKKEVAGETKTEKKEGGAVEEGIKAAEEKKLAEEPKVEKQNGEA
Sbjct: 301 EKLLAGEVEKEGIKAVEKKEVAGETKTEKKEGGAVEEGIKAAEEKKLAEEPKVEKQNGEA 360

Query: 361 VKLKEESEGKKEETQISAPTPLQDKNLKDPKENGGDLEVKNSTTEEKKIAPTN 403
           VKLKEESEGKKEETQISAPTPLQDKNLKDPKENGGDLEVKNSTTEEKKIAPTN
Sbjct: 361 VKLKEESEGKKEETQISAPTPLQDKNLKDPKENGGDLEVKNSTTEEKKIAPTN 407

[Close]

BLAST of CSPI03G14010 vs. ExPASy TrEMBL
Match: A0A1S3AXZ0 (DNA ligase 1-like OS=Cucumis melo OX=3656 GN=LOC103483804 PE=4 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 2.6e-103
Identity = 252/312 (80.77%), Postives = 263/312 (84.29%), Query Frame = 0


Query: 107 MGCGESKLAIDTADGILHRKKSSASRSKSGRRAGDESKTSTAHSSSADLKVPSLNKIDSS 166
           MGCGESKLAI TADGILHRKKSSASRSKSG RA D SKT  A SS ADLKVPSLNKIDSS
Sbjct: 1   MGCGESKLAISTADGILHRKKSSASRSKSGSRAADGSKTGAADSSVADLKVPSLNKIDSS 60

Query: 167 VK-VESSENKVEQRDEKKIDDVAKIEPEVKTEQKIDAAVK---IESEEKSDSIVVTEGVK 226
           +K VESSENKVEQRDEKKIDDVAK EPEVK EQKIDAAVK   +++EEK +  V  +  K
Sbjct: 61  LKVVESSENKVEQRDEKKIDDVAKTEPEVKIEQKIDAAVKTEGVKTEEKREKEVAGDNEK 120

Query: 227 TE-------ERKEKEVAGDSEKKEKEVASSSEKKENEDGGNGGSVEKQVAGETKAEEKKE 286
            E       + KEKEV+G SEKKEKEV++  EKKE EDGGNGGSVEKQVAGETKAEEKKE
Sbjct: 121 KEVAGDSEKKEKEKEVSGGSEKKEKEVSAGGEKKEKEDGGNGGSVEKQVAGETKAEEKKE 180

Query: 287 ----GSEVK-VEQGVKGVEEKLLAGEVEKEGIKAVEKKEVAGET-KTEKKEGGAVEEGIK 346
               GSEVK VEQGVK VEEK L GEVEK GIKA +KKEVAGET KTEKKEGGAVEEGIK
Sbjct: 181 DGVKGSEVKVVEQGVKAVEEKPLGGEVEKAGIKAADKKEVAGETIKTEKKEGGAVEEGIK 240

Query: 347 AAEEKKLAEEPKVEKQNGEAVKLKEESEGKKEETQISAPTPLQDKNLKDPKENGGDLEVK 402
           AAEEKKLAEEPKVEKQNGEAVKLKEESE KKEETQ SAPTPLQDKNLKDPKENGGDL VK
Sbjct: 241 AAEEKKLAEEPKVEKQNGEAVKLKEESEAKKEETQSSAPTPLQDKNLKDPKENGGDLGVK 300

[Close]

BLAST of CSPI03G14010 vs. ExPASy TrEMBL
Match: A0A5A7U7H3 (DNA ligase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00520 PE=4 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 8.3e-102
Identity = 252/323 (78.02%), Postives = 262/323 (81.11%), Query Frame = 0


Query: 107 MGCGESKLAIDTADGILHRKKSSASRSKSGRRAGDESKTSTAHSSSADLKVPSLNKIDSS 166
           MGCGESKLAI TADGILHRKKSSASRSKSG RA D SKT  A SS ADLKVPSLNKIDSS
Sbjct: 1   MGCGESKLAISTADGILHRKKSSASRSKSGSRAADGSKTGAADSSVADLKVPSLNKIDSS 60

Query: 167 VK-VESSENKVEQRDEKKIDDVAKIEPEVKTEQKIDAAVK---IESEEKSDSIVVTEGVK 226
           +K VESSENKVEQ DEKKIDDVAK EPEVK EQKIDAAVK   +++EEK +  V  +  K
Sbjct: 61  LKVVESSENKVEQLDEKKIDDVAKTEPEVKIEQKIDAAVKTEGVKTEEKREKEVAGDNEK 120

Query: 227 TE------------------ERKEKEVAGDSEKKEKEVASSSEKKENEDGGNGGSVEKQV 286
            E                  E+KEKEV+G SEKKEKEV+   EKKE EDGGNGGSVEKQV
Sbjct: 121 KEVAGDSEKKEKEKEVAGDSEKKEKEVSGGSEKKEKEVSGGGEKKEKEDGGNGGSVEKQV 180

Query: 287 AGETKAEEKKE----GSEVK-VEQGVKGVEEKLLAGEVEKEGIKAVEKKEVAGET-KTEK 346
           AGETKAEEKKE    GSEVK VEQGVK VEEK L GEVEK GIKA +KKEVAGET KTEK
Sbjct: 181 AGETKAEEKKEDGVKGSEVKVVEQGVKAVEEKPLGGEVEKAGIKAADKKEVAGETIKTEK 240

Query: 347 KEGGAVEEGIKAAEEKKLAEEPKVEKQNGEAVKLKEESEGKKEETQISAPTPLQDKNLKD 402
           KEGGAVEEGIKAAEEKKLAEEPKVEKQNGEAVKLKEESE KKEETQ SAPTPLQDKNLKD
Sbjct: 241 KEGGAVEEGIKAAEEKKLAEEPKVEKQNGEAVKLKEESEAKKEETQSSAPTPLQDKNLKD 300

[Close]

BLAST of CSPI03G14010 vs. ExPASy TrEMBL
Match: A0A6J1IS09 (enolase-phosphatase E1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111479436 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 2.2e-38
Identity = 164/346 (47.40%), Postives = 196/346 (56.65%), Query Frame = 0


Query: 107 MGCGESKLAIDTADGILHRKKSSASRSKSGRRAG----DESKTSTAHSSSADLKVPSLNK 166
           MGCGESKLA+ T DG+L RKKSSA RSK+G +A     D+ K ++   +    K+ +  K
Sbjct: 1   MGCGESKLAVSTTDGVLLRKKSSA-RSKNGSKAAVAVVDDVKVASVKKTE---KMINEEK 60

Query: 167 IDSSVKVESSENKVEQRDEKKIDDVAKIEPEVKTEQKIDAAVKIESEEKSDSIV------ 226
           ID SVK+ES +N  E+R+EKK D            +KI   VK ESEEKSD +V      
Sbjct: 61  IDGSVKIESEKN-TEKREEKKSD-----------AEKIVGTVKFESEEKSDGVVAEVQNP 120

Query: 227 VTEGVKTEERKEKEVAGDSEKKEKEVASSSEKKENEDGGNGGSVEKQVAGETKAEEKKE- 286
            TE  KTEE KEKEV  D EKKEK           EDG NGG++EKQVAGETKAE++KE 
Sbjct: 121 ATEVAKTEEIKEKEVTCDGEKKEK-----------EDGNNGGAIEKQVAGETKAEKEKEK 180

Query: 287 -----GSEVKVEQGVKGVEEKLLAGEVEKEGIKAVEKKEVAG------------------ 346
                GS ++V QG K VEE+ LAGEVE +G K VEKK+V G                  
Sbjct: 181 EAIVSGSPIEVAQGTKPVEEQQLAGEVE-QGNKPVEKKQVVGEVEQVIKPVEEKPLIGQV 240

Query: 347 --------------ETKTEKKEGG------AVEEGIKAAEEKKLAEEPKVEKQNGEAVKL 392
                         ETKTEK E G       +E+ IK  EEK+LAEEPKVEKQ GEAVKL
Sbjct: 241 EQIIKTVDEKQLPIETKTEKNESGDNGGSAIIEQVIKPVEEKQLAEEPKVEKQTGEAVKL 300

[Close]

BLAST of CSPI03G14010 vs. ExPASy TrEMBL
Match: A0A6J1IUL2 (enolase-phosphatase E1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111479436 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 4.2e-37
Identity = 155/322 (48.14%), Postives = 185/322 (57.45%), Query Frame = 0


Query: 107 MGCGESKLAIDTADGILHRKKSSASRSKSGRRAG----DESKTSTAHSSSADLKVPSLNK 166
           MGCGESKLA+ T DG+L RKKSSA RSK+G +A     D+ K ++   +    K+ +  K
Sbjct: 1   MGCGESKLAVSTTDGVLLRKKSSA-RSKNGSKAAVAVVDDVKVASVKKTE---KMINEEK 60

Query: 167 IDSSVKVESSENKVEQRDEKKIDDVAKIEPEVKTEQKIDAAVKIESEEKSDSIV------ 226
           ID SVK+ES +N  E+R+EKK D            +KI   VK ESEEKSD +V      
Sbjct: 61  IDGSVKIESEKN-TEKREEKKSD-----------AEKIVGTVKFESEEKSDGVVAEVQNP 120

Query: 227 VTEGVKTEERKEKEVAGDSEKKEKEVASSSEKKENEDGGNGGSVEKQVAGETKAEEKKE- 286
            TE  KTEE KEKEV  D EKKEK           EDG NGG++EKQVAGETKAE++KE 
Sbjct: 121 ATEVAKTEEIKEKEVTCDGEKKEK-----------EDGNNGGAIEKQVAGETKAEKEKEK 180

Query: 287 -----GSEVKVEQGVKGVEEKLLAGEVEKEGIKAVEKKEVAG------------------ 346
                GS ++V QG K VEE+ LAGEVE +G K VEKK+V G                  
Sbjct: 181 EAIVSGSPIEVAQGTKPVEEQQLAGEVE-QGNKPVEKKQVVGEVEQVIKPVEEKPLIGQV 240

Query: 347 --------------ETKTEKKEGG------AVEEGIKAAEEKKLAEEPKVEKQNGEAVKL 368
                         ETKTEK E G       +E+ IK  EEK+LAEEPKVEKQ GEAVKL
Sbjct: 241 EQIIKTVDEKQLPIETKTEKNESGDNGGSAIIEQVIKPVEEKQLAEEPKVEKQTGEAVKL 294

[Close]

BLAST of CSPI03G14010 vs. NCBI nr
Match: XP_004134472.3 (histone-lysine N-methyltransferase, H3 lysine-79 specific [Cucumis sativus])

HSP 1 Score: 630.6 bits (1625), Expect = 9.6e-177
Identity = 377/403 (93.55%), Postives = 377/403 (93.55%), Query Frame = 0


Query: 22  MAMESHPLTNLFSLIVNYKTNQPTTSIPSNESTFRFFAVASHSISPLPVLKPGEIYSIFH 81
           MAMESHPLTNLFSLIVNYKTNQPTTSIPSNESTFRFFAVASHSISPLPVLKPGEIYSIFH
Sbjct: 1   MAMESHPLTNLFSLIVNYKTNQPTTSIPSNESTFRFFAVASHSISPLPVLKPGEIYSIFH 60

Query: 82  PISSSSSSSSSSSSSSSSSLHFPLSMGCGESKLAIDTADGILHRKKSSASRSKSGRRAGD 141
           PI   SSSSSSSSSSSSSSLHFPLSMGCGESKLAIDTADGILHRKKSSASRSKSGRRAGD
Sbjct: 61  PI---SSSSSSSSSSSSSSLHFPLSMGCGESKLAIDTADGILHRKKSSASRSKSGRRAGD 120

Query: 142 ESKTSTAHSSSADLKVPSLNKIDSSVKVESSENKVEQRDEKKIDDVAKIEPEVKTEQKID 201
            SKTSTAHSSSADLKVPSLNKIDSSVKVESSENKVEQRDEKKIDDVAKIEPEVKTEQKID
Sbjct: 121 GSKTSTAHSSSADLKVPSLNKIDSSVKVESSENKVEQRDEKKIDDVAKIEPEVKTEQKID 180

Query: 202 AAVKIESEEKSDSIVVTEGVKTEERKEKEVAGD----------------------SEKKE 261
           AAVKIESEEKSDSIVVTEGVKTEERKEKEVAGD                      SEKKE
Sbjct: 181 AAVKIESEEKSDSIVVTEGVKTEERKEKEVAGDSEKKEKEVASSSEKKEKEVASSSEKKE 240

Query: 262 KEVASSSEKKENEDGGNGGSVEKQVAGETKAEEKKEGSEVKVEQGVKGVEEKLLAGEVEK 321
           KEVASSSEKKENEDGGNGGSVEKQVAGETKAEEKKEGSEVKVEQGVKGVEEKLLAGEVEK
Sbjct: 241 KEVASSSEKKENEDGGNGGSVEKQVAGETKAEEKKEGSEVKVEQGVKGVEEKLLAGEVEK 300

Query: 322 EGIKAVEKKEVAGETKTEKKEGGAVEEGIKAAEEKKLAEEPKVEKQNGEAVKLKEESEGK 381
           EGIKAVEKKEVAGETKTEKKEGGAVEEGIKAAEEKKLAEEPKVEKQNGEAVKLKEESEGK
Sbjct: 301 EGIKAVEKKEVAGETKTEKKEGGAVEEGIKAAEEKKLAEEPKVEKQNGEAVKLKEESEGK 360

Query: 382 KEETQISAPTPLQDKNLKDPKENGGDLEVKNSTTEEKKIAPTN 403
           KEETQISAPTPLQDKNLKDPKENGGDLEVKNSTTEEKKIAPTN
Sbjct: 361 KEETQISAPTPLQDKNLKDPKENGGDLEVKNSTTEEKKIAPTN 400

[Close]

BLAST of CSPI03G14010 vs. NCBI nr
Match: KAE8650378.1 (hypothetical protein Csa_009605 [Cucumis sativus])

HSP 1 Score: 487.3 bits (1253), Expect = 1.3e-133
Identity = 295/318 (92.77%), Postives = 295/318 (92.77%), Query Frame = 0


Query: 107 MGCGESKLAIDTADGILHRKKSSASRSKSGRRAGDESKTSTAHSSSADLKVPSLNKIDSS 166
           MGCGESKLAIDTADGILHRKKSSASRSKSGRRAGD SKTSTAHSSSADLKVPSLNKIDSS
Sbjct: 1   MGCGESKLAIDTADGILHRKKSSASRSKSGRRAGDGSKTSTAHSSSADLKVPSLNKIDSS 60

Query: 167 VKVESSENKVEQRDEKKIDDVAKIEPEVKTEQKIDAAVKIESEEKSDSIVVTEGVKTEER 226
           VKVESSENKVEQRDEKKIDDVAKIEPEVKTEQKIDAAVKIESEEKSDSIVVTEGVKTEER
Sbjct: 61  VKVESSENKVEQRDEKKIDDVAKIEPEVKTEQKIDAAVKIESEEKSDSIVVTEGVKTEER 120

Query: 227 KEKEVAGD----------------------SEKKEKEVASSSEKKENEDGGNGGSVEKQV 286
           KEKEVAGD                      SEKKEKEVASSSEKKENEDGGNGGSVEKQV
Sbjct: 121 KEKEVAGDSEKKEKEVASSSEKKEKEVASSSEKKEKEVASSSEKKENEDGGNGGSVEKQV 180

Query: 287 AGETKAEEKKEGSEVKVEQGVKGVEEKLLAGEVEKEGIKAVEKKEVAGETKTEKKEGGAV 346
           AGETKAEEKKEGSEVKVEQGVKGVEEKLLAGEVEKEGIKAVEKKEVAGETKTEKKEGGAV
Sbjct: 181 AGETKAEEKKEGSEVKVEQGVKGVEEKLLAGEVEKEGIKAVEKKEVAGETKTEKKEGGAV 240

Query: 347 EEGIKAAEEKKLAEEPKVEKQNGEAVKLKEESEGKKEETQISAPTPLQDKNLKDPKENGG 403
           EEGIKAAEEKKLAEEPKVEKQNGEAVKLKEESEGKKEETQISAPTPLQDKNLKDPKENGG
Sbjct: 241 EEGIKAAEEKKLAEEPKVEKQNGEAVKLKEESEGKKEETQISAPTPLQDKNLKDPKENGG 300

[Close]

BLAST of CSPI03G14010 vs. NCBI nr
Match: XP_008438814.1 (PREDICTED: DNA ligase 1-like [Cucumis melo])

HSP 1 Score: 385.6 bits (989), Expect = 5.4e-103
Identity = 252/312 (80.77%), Postives = 263/312 (84.29%), Query Frame = 0


Query: 107 MGCGESKLAIDTADGILHRKKSSASRSKSGRRAGDESKTSTAHSSSADLKVPSLNKIDSS 166
           MGCGESKLAI TADGILHRKKSSASRSKSG RA D SKT  A SS ADLKVPSLNKIDSS
Sbjct: 1   MGCGESKLAISTADGILHRKKSSASRSKSGSRAADGSKTGAADSSVADLKVPSLNKIDSS 60

Query: 167 VK-VESSENKVEQRDEKKIDDVAKIEPEVKTEQKIDAAVK---IESEEKSDSIVVTEGVK 226
           +K VESSENKVEQRDEKKIDDVAK EPEVK EQKIDAAVK   +++EEK +  V  +  K
Sbjct: 61  LKVVESSENKVEQRDEKKIDDVAKTEPEVKIEQKIDAAVKTEGVKTEEKREKEVAGDNEK 120

Query: 227 TE-------ERKEKEVAGDSEKKEKEVASSSEKKENEDGGNGGSVEKQVAGETKAEEKKE 286
            E       + KEKEV+G SEKKEKEV++  EKKE EDGGNGGSVEKQVAGETKAEEKKE
Sbjct: 121 KEVAGDSEKKEKEKEVSGGSEKKEKEVSAGGEKKEKEDGGNGGSVEKQVAGETKAEEKKE 180

Query: 287 ----GSEVK-VEQGVKGVEEKLLAGEVEKEGIKAVEKKEVAGET-KTEKKEGGAVEEGIK 346
               GSEVK VEQGVK VEEK L GEVEK GIKA +KKEVAGET KTEKKEGGAVEEGIK
Sbjct: 181 DGVKGSEVKVVEQGVKAVEEKPLGGEVEKAGIKAADKKEVAGETIKTEKKEGGAVEEGIK 240

Query: 347 AAEEKKLAEEPKVEKQNGEAVKLKEESEGKKEETQISAPTPLQDKNLKDPKENGGDLEVK 402
           AAEEKKLAEEPKVEKQNGEAVKLKEESE KKEETQ SAPTPLQDKNLKDPKENGGDL VK
Sbjct: 241 AAEEKKLAEEPKVEKQNGEAVKLKEESEAKKEETQSSAPTPLQDKNLKDPKENGGDLGVK 300

[Close]

BLAST of CSPI03G14010 vs. NCBI nr
Match: KAA0049449.1 (DNA ligase 1-like [Cucumis melo var. makuwa] >TYK16128.1 DNA ligase 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 380.6 bits (976), Expect = 1.7e-101
Identity = 252/323 (78.02%), Postives = 262/323 (81.11%), Query Frame = 0


Query: 107 MGCGESKLAIDTADGILHRKKSSASRSKSGRRAGDESKTSTAHSSSADLKVPSLNKIDSS 166
           MGCGESKLAI TADGILHRKKSSASRSKSG RA D SKT  A SS ADLKVPSLNKIDSS
Sbjct: 1   MGCGESKLAISTADGILHRKKSSASRSKSGSRAADGSKTGAADSSVADLKVPSLNKIDSS 60

Query: 167 VK-VESSENKVEQRDEKKIDDVAKIEPEVKTEQKIDAAVK---IESEEKSDSIVVTEGVK 226
           +K VESSENKVEQ DEKKIDDVAK EPEVK EQKIDAAVK   +++EEK +  V  +  K
Sbjct: 61  LKVVESSENKVEQLDEKKIDDVAKTEPEVKIEQKIDAAVKTEGVKTEEKREKEVAGDNEK 120

Query: 227 TE------------------ERKEKEVAGDSEKKEKEVASSSEKKENEDGGNGGSVEKQV 286
            E                  E+KEKEV+G SEKKEKEV+   EKKE EDGGNGGSVEKQV
Sbjct: 121 KEVAGDSEKKEKEKEVAGDSEKKEKEVSGGSEKKEKEVSGGGEKKEKEDGGNGGSVEKQV 180

Query: 287 AGETKAEEKKE----GSEVK-VEQGVKGVEEKLLAGEVEKEGIKAVEKKEVAGET-KTEK 346
           AGETKAEEKKE    GSEVK VEQGVK VEEK L GEVEK GIKA +KKEVAGET KTEK
Sbjct: 181 AGETKAEEKKEDGVKGSEVKVVEQGVKAVEEKPLGGEVEKAGIKAADKKEVAGETIKTEK 240

Query: 347 KEGGAVEEGIKAAEEKKLAEEPKVEKQNGEAVKLKEESEGKKEETQISAPTPLQDKNLKD 402
           KEGGAVEEGIKAAEEKKLAEEPKVEKQNGEAVKLKEESE KKEETQ SAPTPLQDKNLKD
Sbjct: 241 KEGGAVEEGIKAAEEKKLAEEPKVEKQNGEAVKLKEESEAKKEETQSSAPTPLQDKNLKD 300

[Close]

BLAST of CSPI03G14010 vs. NCBI nr
Match: XP_038902432.1 (histone-lysine N-methyltransferase, H3 lysine-79 specific-like [Benincasa hispida])

HSP 1 Score: 307.4 bits (786), Expect = 1.9e-79
Identity = 217/324 (66.98%), Postives = 249/324 (76.85%), Query Frame = 0


Query: 107 MGCGESKLAIDTADGILHRKKSSASRSKSGRRAGDESKTSTAHSSSADLKVPSLNKI--- 166
           MGCGESKLA+ TADGILHRKKS A RSKSGR++ D SK S+A ++ ADLKVPS NKI   
Sbjct: 1   MGCGESKLAVATADGILHRKKSIAGRSKSGRKSADGSK-SSADAAVADLKVPSQNKIDEE 60

Query: 167 --DSSVKVESSENKVEQRDEKKI-DDVAKIEPE--------VKTEQKIDAAVKIESEEKS 226
             DS+VK+E SENK+EQR+EKKI DD AKI+ E        +++E+KID AVK ESEEK 
Sbjct: 61  KVDSAVKIE-SENKIEQREEKKIDDDAAKIKSEKKIHDAVKIESEKKIDGAVKSESEEKI 120

Query: 227 DSI------VVTEGVKTEERKEKEVAGDSEKKEKEVASSSEKKENEDGGNGGSVEKQVAG 286
           DS+      V TEG KTEERKEKEV GDSEKKEKE    SEKKE E G NGGSVEKQVAG
Sbjct: 121 DSVVAEVQNVATEGGKTEERKEKEVTGDSEKKEKEATGDSEKKEKEGGDNGGSVEKQVAG 180

Query: 287 ETKA--EEKKEGSEVKVEQGVKGVEEKLLAGEVEKEGIKAVEKKEVAGETKTEKKEGGAV 346
           ETKA  E++KE  E+ VEQ +K VEEK L GEVE +GIK VE+K++ GETKTEKK+GGAV
Sbjct: 181 ETKAEKEKEKEAGEIVVEQKIKPVEEKPLTGEVE-QGIKLVEEKQLVGETKTEKKDGGAV 240

Query: 347 EEGIKAAEEKKLAEEPKVEKQNGEAVKLKEESEGKK--------EETQISAPTPLQDKNL 401
           E+  K AEEK+LAEEPKVEKQNGEAVKLKEE++ KK        EETQ SA TPL+DKN+
Sbjct: 241 EQANKPAEEKQLAEEPKVEKQNGEAVKLKEETQAKKEEAAAPKVEETQSSA-TPLEDKNV 300

The following BLAST results are available for this feature:

BLAST of CSPI03G14010 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI03G14010 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L8Y3	2.8e-190	95.64	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G152040 PE=4 SV=1	[more]
A0A1S3AXZ0	2.6e-103	80.77	DNA ligase 1-like OS=Cucumis melo OX=3656 GN=LOC103483804 PE=4 SV=1	[more]
A0A5A7U7H3	8.3e-102	78.02	DNA ligase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00...	[more]
A0A6J1IS09	2.2e-38	47.40	enolase-phosphatase E1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1114794...	[more]
A0A6J1IUL2	4.2e-37	48.14	enolase-phosphatase E1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1114794...	[more]

BLAST of CSPI03G14010 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134472.3	9.6e-177	93.55	histone-lysine N-methyltransferase, H3 lysine-79 specific [Cucumis sativus]	[more]
KAE8650378.1	1.3e-133	92.77	hypothetical protein Csa_009605 [Cucumis sativus]	[more]
XP_008438814.1	5.4e-103	80.77	PREDICTED: DNA ligase 1-like [Cucumis melo]	[more]
KAA0049449.1	1.7e-101	78.02	DNA ligase 1-like [Cucumis melo var. makuwa] >TYK16128.1 DNA ligase 1-like [Cucu...	[more]
XP_038902432.1	1.9e-79	66.98	histone-lysine N-methyltransferase, H3 lysine-79 specific-like [Benincasa hispid...	[more]

BLAST of CSPI03G14010 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 342..362
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 168..256
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 301..362
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 374..394
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 145..167
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 125..287
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 265..287
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 301..402

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G14010.1	CSPI03G14010.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016874	ligase activity