CSPI03G11410 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI03G11410
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr3: 8917644 .. 8917854 (+)
RNA-Seq ExpressionCSPI03G11410
SyntenyCSPI03G11410
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAATGGGAATGGGAACGGGAATGAGAATGAGGGAGGGGGTGAAAGAAAGGTGTGGTGGGGTTGACGGAAATGGTGGTGGTCCGGCGAGTGGTGTGGGAATGGTAGAGAAGGTTTTGGGGAGAAGAAAAGAGAAGAGAAGAGAATTGAGAATAGAGAATTGTTCCGGCGGGTAGGAAGCGGGTGGGCGTTGAGGATTTGGTTGAATAA

mRNA sequence

ATGGGAATGGGAATGGGAACGGGAATGAGAATGAGGGAGGGGGTGAAAGAAAGGTGTGGTGGGGTTGACGGAAATGGTGGTGGTCCGGCGAGTGGTGTGGGAATGGTAGAGAAGAGAATTGTTCCGGCGGGTAGGAAGCGGGTGGGCGTTGAGGATTTGGTTGAATAA

Coding sequence (CDS)

ATGGGAATGGGAATGGGAACGGGAATGAGAATGAGGGAGGGGGTGAAAGAAAGGTGTGGTGGGGTTGACGGAAATGGTGGTGGTCCGGCGAGTGGTGTGGGAATGGTAGAGAAGAGAATTGTTCCGGCGGGTAGGAAGCGGGTGGGCGTTGAGGATTTGGTTGAATAA

Protein sequence

MGMGMGTGMRMREGVKERCGGVDGNGGGPASGVGMVEKRIVPAGRKRVGVEDLVE*
Homology
[Close]
BLAST of CSPI03G11410 vs. ExPASy TrEMBL
Match: A0A0A0L6X4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G133940 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 9.4e-12
Identity = 40/47 (85.11%), Postives = 41/47 (87.23%), Query Frame = 0 

Query: 1  MGMGMGTGMRMREGVKERCGGVDGNGGGPASGVGMVEKRIVPAGRKR 48
          MGMGMGTGMRMREGVKERCGGVDGNGGGPASGVGMVEK +     KR
Sbjct: 1  MGMGMGTGMRMREGVKERCGGVDGNGGGPASGVGMVEKVLGRRKEKR 47

[Close]
BLAST of CSPI03G11410 vs. NCBI nr
Match: KGN56794.1 (hypothetical protein Csa_010918 [Cucumis sativus])

HSP 1 Score: 78.6 bits (192), Expect = 1.9e-11
Identity = 40/47 (85.11%), Postives = 41/47 (87.23%), Query Frame = 0 

Query: 1  MGMGMGTGMRMREGVKERCGGVDGNGGGPASGVGMVEKRIVPAGRKR 48
          MGMGMGTGMRMREGVKERCGGVDGNGGGPASGVGMVEK +     KR
Sbjct: 1  MGMGMGTGMRMREGVKERCGGVDGNGGGPASGVGMVEKVLGRRKEKR 47

The following BLAST results are available for this feature:
BLAST of CSPI03G11410 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI03G11410 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L6X49.4e-1285.11Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G133940 PE=4 SV=1[more]
BLAST of CSPI03G11410 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN56794.11.9e-1185.11hypothetical protein Csa_010918 [Cucumis sativus][more]
BLAST of CSPI03G11410 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G11410.1CSPI03G11410.1mRNA