CSPI03G08190 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G08190
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Copper ion binding protein
Location	Chr3: 6966586 .. 6969125 (-)
RNA-Seq Expression	CSPI03G08190
Synteny	CSPI03G08190

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCGACTTAAGAACTCAATTATTAAAAAAAGAAATCGAACCCGTTGGCCGAAAGGGTGTTCATATGGGGCGCGGGGTGTGGTGAGGCTTCTTCAAGAAAAACCCTATTTGATGGTGAAGTTGGTGAGTAAGGGGTTTTAGCTTCCGAGCTTTGAGACATGATCCGTTTCACCAAATTCAAATCTCTCTCCCTATCTGCAGATTCCGGCGCCCACCAATTGCTTCAAAGATGCTGGGTGAGTCGTACTGCCAAAGGCAAATCCAAGATCAAAGCTGGCCAACCGCTGAAGCGCTCCAAAATCACCGTTAAAAAAGGCGGAGCCGCTTCCAAAGGTGGTGATGGTGGTGGAGGAAAGAAAATCCCTCCCGACCAGGAAAAGCTCTATGATCAATGCCTAAATGCTCCTACTCCTCTCCGGTTCTTGAAAGCTAAAGAAAGAGAACGCGAGGCCAAGCGAGAGAAGCTCGGCCTCATCAGCAAAGAGCGCCAACGTGAGATTGATATGATGAAGATGGATAAATCGAAATTGGGGATTTCTGATTCTCCCTCCATTATTGGCACTCCGGGTTTGGATTTGATTTCGCTAGGTTTAGTCGACGCGGATAAGATTCCCAAGTATGAGTTGACAGTGGAAGATGGGCAGCGACTTGCAAAGGAATACAGTCGGGTGTTGATGAAGCAACATCGTGCAAGACGGGCAGCTGAAACGATGCTGTTGAAGATGAAGAGCGAAGCTATTGAAGCATTACCAGATCATTTGAAAGCTGCTGCTTTGGTTCCAGATATGACCCCGTTCCCCGCAGACAGGTTCATGGCGACTTTGACGCCTCCAATCGAAGGGTATGTGGAAAAGATCGATGAAGCAGCGAAGAAGAGTACTGGGAAAGAGAAACTTAGATGATCAGAGAGGTCAGAAATTTCTTTTGCTTGTGTTCTAATTTAATTTCCCCAAACTTATCTAGTAGATTGGTATCTTTTATTCCAGTTGTAGTGATATTTTCAGAGACTGCATTGCTCAAGTATAGGCATATCAAAATGTTGAATCATAATTTGAAGGGTTGAGTCGAAAACTTATCTGTCCTTAGTGATGAGCTAGCTATGGGAAAGAAGATCGATATTTTACCCTTATTTTAAAGCAGTATTCATTTTGGTGGTTATCTTTTGAGTCTTTACCGGTTTAGGAAACAACTTCCAGGATTTAATATAGATTGGAGGAGAGGTTTCTACCTTCTCAACTGAGGAATTGCTGACTCGTGCTTTTCACATTCATATTGGTAAATTTAATGTGCAGTTTTCTCATTATTATAAGGATTTTTGGATTACCTGGCTAAGGAACCAGTTTATCTTCTGGATAAATCCAACCCTGTTTCCCAAGATCTTGGTTCCAAATAGCTGAAGTTGAAAGGGGTTCATCATTCGCAATAATTAGTCGAAAGACATGTTTTATGAATTACCTGGCTAAAGAACCAAATTGTCTTCTAAATAAATCCAACACTGTTCCGTCAAGATCTTGGTATGGAATAGCTCAAGGATTCATTGTAAGGAACGCAAAGTCATGTTTTATTAATTCCACTACTGTTCATGTTTTTGGGAACTCATGTAGAAGTATAATCTGACTCAGATCGTTTCCTTTGCTTCCTACCATTTGCTTCAAAGTTAAACAATTACTAAGGTCCGATTATGACGTTATCTCCTTAAGCTAAAGCAGGAGGCTCTGGCGGTTCAGAAGAATCTTCACTGTCTTCCTCACCGCTACTCGTTCAATTTTTGTTGGTTGTATTTGGTTAAATATCAGAAGACCACTCGAAAAGCAGGCACTTTGCTCAGCTCTGACTGAGACTTCCCAAGTTTTCCACGGTCATCACATCTAAAAGAATCATACAATTTGACATTTTATAGTGCCTTCGATTATCACCGTATGGAGAAAATATTCCCAATATATCCAATAGTCAAACTAAGAGAATATAGTACATTTTACCACGTTGTTCATAAAAATTCGAATGCTTTCTAGATTTCATGGTTATCCATTGTCGTGTTCATACTATATGATATACTAAACCTTTCTTGTCTGATGGTTTATCTTTATTTGCATTGGTTTCTTCTGTTCACTAATATTTCACTCTGGGAATCTAGAGATAGAGAATTATTTGCTCGTTAGGGGTTGATAACTGATGAGATTTCCTATGGTGCAATCACATTGATTATTATTGTTGTTTCTTTGTTTGCATTAGATTACAAGTAGATGAAGCTTGCAGGCTGGAAAAGAAGAGTTCGTAGCAGTTAGAATCTGAAAACCAAAGCTCGTGGTTGCATTTTTTTTAAAAGAAAAGAGCCACGAAGCATTGGATGTGTGGTAACAATAAGATCTCCTGAATTTTTCAAGATTGTAACTTCAAGGCTTTTTCAAGAAAATGCTTGGAGCAACATTATTCCTTTACTGTTATCATTATTATTTATCACTATTTTTGGGGGTTGGTTTTATGTTTTTGGATTGATTTCGATGGGTTTGTGATATTTTTAATTCCAGAGGTTTCTTTTG

mRNA sequence

ATTCGACTTAAGAACTCAATTATTAAAAAAAGAAATCGAACCCGTTGGCCGAAAGGGTGTTCATATGGGGCGCGGGGTGTGGTGAGGCTTCTTCAAGAAAAACCCTATTTGATGGTGAAGTTGGTGAGTAAGGGGTTTTAGCTTCCGAGCTTTGAGACATGATCCGTTTCACCAAATTCAAATCTCTCTCCCTATCTGCAGATTCCGGCGCCCACCAATTGCTTCAAAGATGCTGGGTGAGTCGTACTGCCAAAGGCAAATCCAAGATCAAAGCTGGCCAACCGCTGAAGCGCTCCAAAATCACCGTTAAAAAAGGCGGAGCCGCTTCCAAAGGTGGTGATGGTGGTGGAGGAAAGAAAATCCCTCCCGACCAGGAAAAGCTCTATGATCAATGCCTAAATGCTCCTACTCCTCTCCGGTTCTTGAAAGCTAAAGAAAGAGAACGCGAGGCCAAGCGAGAGAAGCTCGGCCTCATCAGCAAAGAGCGCCAACGTGAGATTGATATGATGAAGATGGATAAATCGAAATTGGGGATTTCTGATTCTCCCTCCATTATTGGCACTCCGGGTTTGGATTTGATTTCGCTAGGTTTAGTCGACGCGGATAAGATTCCCAAGTATGAGTTGACAGTGGAAGATGGGCAGCGACTTGCAAAGGAATACAGTCGGGTGTTGATGAAGCAACATCGTGCAAGACGGGCAGCTGAAACGATGCTGTTGAAGATGAAGAGCGAAGCTATTGAAGCATTACCAGATCATTTGAAAGCTGCTGCTTTGGTTCCAGATATGACCCCGTTCCCCGCAGACAGGTTCATGGCGACTTTGACGCCTCCAATCGAAGGGTATGTGGAAAAGATCGATGAAGCAGCGAAGAAGAGTACTGGGAAAGAGAAACTTAGATGATCAGAGAGATTACAAGTAGATGAAGCTTGCAGGCTGGAAAAGAAGAGTTCGTAGCAGTTAGAATCTGAAAACCAAAGCTCGTGGTTGCATTTTTTTTAAAAGAAAAGAGCCACGAAGCATTGGATGTGTGGTAACAATAAGATCTCCTGAATTTTTCAAGATTGTAACTTCAAGGCTTTTTCAAGAAAATGCTTGGAGCAACATTATTCCTTTACTGTTATCATTATTATTTATCACTATTTTTGGGGGTTGGTTTTATGTTTTTGGATTGATTTCGATGGGTTTGTGATATTTTTAATTCCAGAGGTTTCTTTTG

Coding sequence (CDS)

ATGATCCGTTTCACCAAATTCAAATCTCTCTCCCTATCTGCAGATTCCGGCGCCCACCAATTGCTTCAAAGATGCTGGGTGAGTCGTACTGCCAAAGGCAAATCCAAGATCAAAGCTGGCCAACCGCTGAAGCGCTCCAAAATCACCGTTAAAAAAGGCGGAGCCGCTTCCAAAGGTGGTGATGGTGGTGGAGGAAAGAAAATCCCTCCCGACCAGGAAAAGCTCTATGATCAATGCCTAAATGCTCCTACTCCTCTCCGGTTCTTGAAAGCTAAAGAAAGAGAACGCGAGGCCAAGCGAGAGAAGCTCGGCCTCATCAGCAAAGAGCGCCAACGTGAGATTGATATGATGAAGATGGATAAATCGAAATTGGGGATTTCTGATTCTCCCTCCATTATTGGCACTCCGGGTTTGGATTTGATTTCGCTAGGTTTAGTCGACGCGGATAAGATTCCCAAGTATGAGTTGACAGTGGAAGATGGGCAGCGACTTGCAAAGGAATACAGTCGGGTGTTGATGAAGCAACATCGTGCAAGACGGGCAGCTGAAACGATGCTGTTGAAGATGAAGAGCGAAGCTATTGAAGCATTACCAGATCATTTGAAAGCTGCTGCTTTGGTTCCAGATATGACCCCGTTCCCCGCAGACAGGTTCATGGCGACTTTGACGCCTCCAATCGAAGGGTATGTGGAAAAGATCGATGAAGCAGCGAAGAAGAGTACTGGGAAAGAGAAACTTAGATGA

Protein sequence

MIRFTKFKSLSLSADSGAHQLLQRCWVSRTAKGKSKIKAGQPLKRSKITVKKGGAASKGGDGGGGKKIPPDQEKLYDQCLNAPTPLRFLKAKEREREAKREKLGLISKERQREIDMMKMDKSKLGISDSPSIIGTPGLDLISLGLVDADKIPKYELTVEDGQRLAKEYSRVLMKQHRARRAAETMLLKMKSEAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGYVEKIDEAAKKSTGKEKLR*

Homology

[Close]

BLAST of CSPI03G08190 vs. ExPASy TrEMBL
Match: A0A0A0L3Z1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119830 PE=4 SV=1)

HSP 1 Score: 471.1 bits (1211), Expect = 2.9e-129
Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0


Query: 1   MIRFTKFKSLSLSADSGAHQLLQRCWVSRTAKGKSKIKAGQPLKRSKITVKKGGAASKGG 60
           MIRFTKFKSLSLSADSGAHQLLQRCWVSRTAKGKSKIKAGQPLKRSKITVKKGGAASKGG
Sbjct: 1   MIRFTKFKSLSLSADSGAHQLLQRCWVSRTAKGKSKIKAGQPLKRSKITVKKGGAASKGG 60

Query: 61  DGGGGKKIPPDQEKLYDQCLNAPTPLRFLKAKEREREAKREKLGLISKERQREIDMMKMD 120
           DGGGGKKIPPDQEKLYDQCLNAPTPLRFLKAKEREREAKREKLGLISKERQREIDMMKMD
Sbjct: 61  DGGGGKKIPPDQEKLYDQCLNAPTPLRFLKAKEREREAKREKLGLISKERQREIDMMKMD 120

Query: 121 KSKLGISDSPSIIGTPGLDLISLGLVDADKIPKYELTVEDGQRLAKEYSRVLMKQHRARR 180
           KSKLGISDSPSIIGTPGLDLISLGLVDADKIPKYELTVEDGQRLAKEYSRVLMKQHRARR
Sbjct: 121 KSKLGISDSPSIIGTPGLDLISLGLVDADKIPKYELTVEDGQRLAKEYSRVLMKQHRARR 180

Query: 181 AAETMLLKMKSEAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGYVEKIDEAAKKS 240
           AAETMLLKMKSEAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGYVEKIDEAAKKS
Sbjct: 181 AAETMLLKMKSEAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGYVEKIDEAAKKS 240

Query: 241 TGKEKLR 248
           TGKEKLR
Sbjct: 241 TGKEKLR 247

[Close]

BLAST of CSPI03G08190 vs. ExPASy TrEMBL
Match: A0A5D3D1D4 (Copper ion binding isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G005240 PE=4 SV=1)

HSP 1 Score: 436.0 bits (1120), Expect = 1.0e-118
Identity = 227/247 (91.90%), Postives = 239/247 (96.76%), Query Frame = 0


Query: 1   MIRFTKFKSLSLSADSGAHQLLQRCWVSRTAKGKSKIKAGQPLKRSKITVKKGGAASKGG 60
           MIRFTKFKSLSL ADS AHQLLQRCWVS TAKGKSKIKAGQPLKRSKITVKKGGAASKGG
Sbjct: 1   MIRFTKFKSLSLYADSSAHQLLQRCWVSGTAKGKSKIKAGQPLKRSKITVKKGGAASKGG 60

Query: 61  DGGGGKKIPPDQEKLYDQCLNAPTPLRFLKAKEREREAKREKLGLISKERQREIDMMKMD 120
           D GGGKKI P++EKLYDQCLNAPTPLRFLKAKEREREA+REKLGL+SKERQREI+MMKMD
Sbjct: 61  DSGGGKKISPEEEKLYDQCLNAPTPLRFLKAKEREREAEREKLGLMSKERQREIEMMKMD 120

Query: 121 KSKLGISDSPSIIGTPGLDLISLGLVDADKIPKYELTVEDGQRLAKEYSRVLMKQHRARR 180
           KSKLGISDSPSIIGTPGLDLISLG+VDADKIPKYELTVEDG+RLAKEYSRVLM+QHRARR
Sbjct: 121 KSKLGISDSPSIIGTPGLDLISLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRQHRARR 180

Query: 181 AAETMLLKMKSEAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGYVEKIDEAAKKS 240
           AAE+ LLKMK EAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGY+EKIDEAAK+S
Sbjct: 181 AAESTLLKMKKEAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGYMEKIDEAAKRS 240

Query: 241 TGKEKLR 248
           + KEKLR
Sbjct: 241 SAKEKLR 247

[Close]

BLAST of CSPI03G08190 vs. ExPASy TrEMBL
Match: E5GCH1 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 436.0 bits (1120), Expect = 1.0e-118
Identity = 227/247 (91.90%), Postives = 239/247 (96.76%), Query Frame = 0


Query: 1   MIRFTKFKSLSLSADSGAHQLLQRCWVSRTAKGKSKIKAGQPLKRSKITVKKGGAASKGG 60
           MIRFTKFKSLSL ADS AHQLLQRCWVS TAKGKSKIKAGQPLKRSKITVKKGGAASKGG
Sbjct: 1   MIRFTKFKSLSLYADSSAHQLLQRCWVSGTAKGKSKIKAGQPLKRSKITVKKGGAASKGG 60

Query: 61  DGGGGKKIPPDQEKLYDQCLNAPTPLRFLKAKEREREAKREKLGLISKERQREIDMMKMD 120
           D GGGKKI P++EKLYDQCLNAPTPLRFLKAKEREREA+REKLGL+SKERQREI+MMKMD
Sbjct: 61  DSGGGKKISPEEEKLYDQCLNAPTPLRFLKAKEREREAEREKLGLMSKERQREIEMMKMD 120

Query: 121 KSKLGISDSPSIIGTPGLDLISLGLVDADKIPKYELTVEDGQRLAKEYSRVLMKQHRARR 180
           KSKLGISDSPSIIGTPGLDLISLG+VDADKIPKYELTVEDG+RLAKEYSRVLM+QHRARR
Sbjct: 121 KSKLGISDSPSIIGTPGLDLISLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRQHRARR 180

Query: 181 AAETMLLKMKSEAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGYVEKIDEAAKKS 240
           AAE+ LLKMK EAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGY+EKIDEAAK+S
Sbjct: 181 AAESTLLKMKKEAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGYMEKIDEAAKRS 240

Query: 241 TGKEKLR 248
           + KEKLR
Sbjct: 241 SAKEKLR 247

[Close]

BLAST of CSPI03G08190 vs. ExPASy TrEMBL
Match: A0A1S3AVT5 (uncharacterized protein LOC103483214 OS=Cucumis melo OX=3656 GN=LOC103483214 PE=4 SV=1)

HSP 1 Score: 436.0 bits (1120), Expect = 1.0e-118
Identity = 227/247 (91.90%), Postives = 239/247 (96.76%), Query Frame = 0


Query: 1   MIRFTKFKSLSLSADSGAHQLLQRCWVSRTAKGKSKIKAGQPLKRSKITVKKGGAASKGG 60
           MIRFTKFKSLSL ADS AHQLLQRCWVS TAKGKSKIKAGQPLKRSKITVKKGGAASKGG
Sbjct: 1   MIRFTKFKSLSLYADSSAHQLLQRCWVSGTAKGKSKIKAGQPLKRSKITVKKGGAASKGG 60

Query: 61  DGGGGKKIPPDQEKLYDQCLNAPTPLRFLKAKEREREAKREKLGLISKERQREIDMMKMD 120
           D GGGKKI P++EKLYDQCLNAPTPLRFLKAKEREREA+REKLGL+SKERQREI+MMKMD
Sbjct: 61  DSGGGKKISPEEEKLYDQCLNAPTPLRFLKAKEREREAEREKLGLMSKERQREIEMMKMD 120

Query: 121 KSKLGISDSPSIIGTPGLDLISLGLVDADKIPKYELTVEDGQRLAKEYSRVLMKQHRARR 180
           KSKLGISDSPSIIGTPGLDLISLG+VDADKIPKYELTVEDG+RLAKEYSRVLM+QHRARR
Sbjct: 121 KSKLGISDSPSIIGTPGLDLISLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRQHRARR 180

Query: 181 AAETMLLKMKSEAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGYVEKIDEAAKKS 240
           AAE+ LLKMK EAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGY+EKIDEAAK+S
Sbjct: 181 AAESTLLKMKKEAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGYMEKIDEAAKRS 240

Query: 241 TGKEKLR 248
           + KEKLR
Sbjct: 241 SAKEKLR 247

[Close]

BLAST of CSPI03G08190 vs. ExPASy TrEMBL
Match: A0A6J1IYC8 (uncharacterized protein LOC111479606 OS=Cucurbita maxima OX=3661 GN=LOC111479606 PE=4 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 2.2e-108
Identity = 209/248 (84.27%), Postives = 232/248 (93.55%), Query Frame = 0


Query: 1   MIRFTKFKSLSLSADSGAHQLLQRCWVSRTAKGKSKIKAGQPLKRSKITVKKGGAA-SKG 60
           MIRF K KSL  SADSG+H LLQRCWVS TAKGKSKIKAGQ LKRSKIT+KKGGAA SKG
Sbjct: 1   MIRFAKLKSLVPSADSGSHHLLQRCWVSGTAKGKSKIKAGQQLKRSKITIKKGGAASSKG 60

Query: 61  GDGGGGKKIPPDQEKLYDQCLNAPTPLRFLKAKEREREAKREKLGLISKERQREIDMMKM 120
           G GGGG+KI P+QEKLYDQCLNAPTPLRFLK K+REREA+REKLGLISKERQREI+MMKM
Sbjct: 61  GGGGGGRKISPEQEKLYDQCLNAPTPLRFLKPKDREREAEREKLGLISKERQREIEMMKM 120

Query: 121 DKSKLGISDSPSIIGTPGLDLISLGLVDADKIPKYELTVEDGQRLAKEYSRVLMKQHRAR 180
           DKSKLG+SDSPSIIGT GLDLI+LG+VDADKIPKYELTVEDG+RLAKEYSRVLM++HRAR
Sbjct: 121 DKSKLGVSDSPSIIGTMGLDLITLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRRHRAR 180

Query: 181 RAAETMLLKMKSEAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGYVEKIDEAAKK 240
           +AAE+ LL+MK +AIEALP+HLKAAALVPD+TPFPA+RFMATLTPPIEGY+EK+ EAAK 
Sbjct: 181 QAAESTLLQMKKDAIEALPEHLKAAALVPDLTPFPANRFMATLTPPIEGYIEKVKEAAKS 240

Query: 241 STGKEKLR 248
           S+GKEKLR
Sbjct: 241 SSGKEKLR 248

[Close]

BLAST of CSPI03G08190 vs. NCBI nr
Match: XP_004133827.1 (uncharacterized protein LOC101213243 [Cucumis sativus] >KGN56453.1 hypothetical protein Csa_011059 [Cucumis sativus])

HSP 1 Score: 471.1 bits (1211), Expect = 6.0e-129
Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0


Query: 1   MIRFTKFKSLSLSADSGAHQLLQRCWVSRTAKGKSKIKAGQPLKRSKITVKKGGAASKGG 60
           MIRFTKFKSLSLSADSGAHQLLQRCWVSRTAKGKSKIKAGQPLKRSKITVKKGGAASKGG
Sbjct: 1   MIRFTKFKSLSLSADSGAHQLLQRCWVSRTAKGKSKIKAGQPLKRSKITVKKGGAASKGG 60

Query: 61  DGGGGKKIPPDQEKLYDQCLNAPTPLRFLKAKEREREAKREKLGLISKERQREIDMMKMD 120
           DGGGGKKIPPDQEKLYDQCLNAPTPLRFLKAKEREREAKREKLGLISKERQREIDMMKMD
Sbjct: 61  DGGGGKKIPPDQEKLYDQCLNAPTPLRFLKAKEREREAKREKLGLISKERQREIDMMKMD 120

Query: 121 KSKLGISDSPSIIGTPGLDLISLGLVDADKIPKYELTVEDGQRLAKEYSRVLMKQHRARR 180
           KSKLGISDSPSIIGTPGLDLISLGLVDADKIPKYELTVEDGQRLAKEYSRVLMKQHRARR
Sbjct: 121 KSKLGISDSPSIIGTPGLDLISLGLVDADKIPKYELTVEDGQRLAKEYSRVLMKQHRARR 180

Query: 181 AAETMLLKMKSEAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGYVEKIDEAAKKS 240
           AAETMLLKMKSEAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGYVEKIDEAAKKS
Sbjct: 181 AAETMLLKMKSEAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGYVEKIDEAAKKS 240

Query: 241 TGKEKLR 248
           TGKEKLR
Sbjct: 241 TGKEKLR 247

[Close]

BLAST of CSPI03G08190 vs. NCBI nr
Match: XP_008437945.1 (PREDICTED: uncharacterized protein LOC103483214 [Cucumis melo] >ADN34170.1 hypothetical protein [Cucumis melo subsp. melo] >KAA0048916.1 Copper ion binding isoform 2 [Cucumis melo var. makuwa] >TYK17652.1 Copper ion binding isoform 2 [Cucumis melo var. makuwa])

HSP 1 Score: 436.0 bits (1120), Expect = 2.1e-118
Identity = 227/247 (91.90%), Postives = 239/247 (96.76%), Query Frame = 0


Query: 1   MIRFTKFKSLSLSADSGAHQLLQRCWVSRTAKGKSKIKAGQPLKRSKITVKKGGAASKGG 60
           MIRFTKFKSLSL ADS AHQLLQRCWVS TAKGKSKIKAGQPLKRSKITVKKGGAASKGG
Sbjct: 1   MIRFTKFKSLSLYADSSAHQLLQRCWVSGTAKGKSKIKAGQPLKRSKITVKKGGAASKGG 60

Query: 61  DGGGGKKIPPDQEKLYDQCLNAPTPLRFLKAKEREREAKREKLGLISKERQREIDMMKMD 120
           D GGGKKI P++EKLYDQCLNAPTPLRFLKAKEREREA+REKLGL+SKERQREI+MMKMD
Sbjct: 61  DSGGGKKISPEEEKLYDQCLNAPTPLRFLKAKEREREAEREKLGLMSKERQREIEMMKMD 120

Query: 121 KSKLGISDSPSIIGTPGLDLISLGLVDADKIPKYELTVEDGQRLAKEYSRVLMKQHRARR 180
           KSKLGISDSPSIIGTPGLDLISLG+VDADKIPKYELTVEDG+RLAKEYSRVLM+QHRARR
Sbjct: 121 KSKLGISDSPSIIGTPGLDLISLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRQHRARR 180

Query: 181 AAETMLLKMKSEAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGYVEKIDEAAKKS 240
           AAE+ LLKMK EAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGY+EKIDEAAK+S
Sbjct: 181 AAESTLLKMKKEAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGYMEKIDEAAKRS 240

Query: 241 TGKEKLR 248
           + KEKLR
Sbjct: 241 SAKEKLR 247

[Close]

BLAST of CSPI03G08190 vs. NCBI nr
Match: XP_038906439.1 (uncharacterized protein LOC120092349 [Benincasa hispida])

HSP 1 Score: 420.6 bits (1080), Expect = 9.2e-114
Identity = 216/247 (87.45%), Postives = 237/247 (95.95%), Query Frame = 0


Query: 1   MIRFTKFKSLSLSADSGAHQLLQRCWVSRTAKGKSKIKAGQPLKRSKITVKKGGAASKGG 60
           MIRFTKFKSL+LSADSG HQLLQRCWVS TAKGKSKIKAGQPLKRSKITVKKGGA SKGG
Sbjct: 1   MIRFTKFKSLALSADSGGHQLLQRCWVSGTAKGKSKIKAGQPLKRSKITVKKGGATSKGG 60

Query: 61  DGGGGKKIPPDQEKLYDQCLNAPTPLRFLKAKEREREAKREKLGLISKERQREIDMMKMD 120
            GGGG+KIPP+QEKLYDQCLNAPTPLRFLK K+REREA+REKLGLISKERQREI+MMKMD
Sbjct: 61  GGGGGRKIPPEQEKLYDQCLNAPTPLRFLKPKDREREAEREKLGLISKERQREIEMMKMD 120

Query: 121 KSKLGISDSPSIIGTPGLDLISLGLVDADKIPKYELTVEDGQRLAKEYSRVLMKQHRARR 180
           KSKLG+SD+PSIIGT GLDLISLGLVDADKIPKYELTVEDG+RLAKEYSRVLM++HRARR
Sbjct: 121 KSKLGVSDTPSIIGTVGLDLISLGLVDADKIPKYELTVEDGRRLAKEYSRVLMRRHRARR 180

Query: 181 AAETMLLKMKSEAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGYVEKIDEAAKKS 240
           AAE+ LL+MK EAIEALP+HLKAAALVPD+T FPA+RFMATLTPPIEGY+EK+ EAA++S
Sbjct: 181 AAESTLLQMKKEAIEALPEHLKAAALVPDLTLFPANRFMATLTPPIEGYIEKVKEAARRS 240

Query: 241 TGKEKLR 248
           +GKEKLR
Sbjct: 241 SGKEKLR 247

[Close]

BLAST of CSPI03G08190 vs. NCBI nr
Match: XP_022980123.1 (uncharacterized protein LOC111479606 [Cucurbita maxima])

HSP 1 Score: 401.7 bits (1031), Expect = 4.4e-108
Identity = 209/248 (84.27%), Postives = 232/248 (93.55%), Query Frame = 0


Query: 1   MIRFTKFKSLSLSADSGAHQLLQRCWVSRTAKGKSKIKAGQPLKRSKITVKKGGAA-SKG 60
           MIRF K KSL  SADSG+H LLQRCWVS TAKGKSKIKAGQ LKRSKIT+KKGGAA SKG
Sbjct: 1   MIRFAKLKSLVPSADSGSHHLLQRCWVSGTAKGKSKIKAGQQLKRSKITIKKGGAASSKG 60

Query: 61  GDGGGGKKIPPDQEKLYDQCLNAPTPLRFLKAKEREREAKREKLGLISKERQREIDMMKM 120
           G GGGG+KI P+QEKLYDQCLNAPTPLRFLK K+REREA+REKLGLISKERQREI+MMKM
Sbjct: 61  GGGGGGRKISPEQEKLYDQCLNAPTPLRFLKPKDREREAEREKLGLISKERQREIEMMKM 120

Query: 121 DKSKLGISDSPSIIGTPGLDLISLGLVDADKIPKYELTVEDGQRLAKEYSRVLMKQHRAR 180
           DKSKLG+SDSPSIIGT GLDLI+LG+VDADKIPKYELTVEDG+RLAKEYSRVLM++HRAR
Sbjct: 121 DKSKLGVSDSPSIIGTMGLDLITLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRRHRAR 180

Query: 181 RAAETMLLKMKSEAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGYVEKIDEAAKK 240
           +AAE+ LL+MK +AIEALP+HLKAAALVPD+TPFPA+RFMATLTPPIEGY+EK+ EAAK 
Sbjct: 181 QAAESTLLQMKKDAIEALPEHLKAAALVPDLTPFPANRFMATLTPPIEGYIEKVKEAAKS 240

Query: 241 STGKEKLR 248
           S+GKEKLR
Sbjct: 241 SSGKEKLR 248

[Close]

BLAST of CSPI03G08190 vs. NCBI nr
Match: XP_023527048.1 (uncharacterized protein LOC111790399 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 398.7 bits (1023), Expect = 3.8e-107
Identity = 208/248 (83.87%), Postives = 232/248 (93.55%), Query Frame = 0


Query: 1   MIRFTKFKSLSLSADSGAHQLLQRCWVSRTAKGKSKIKAGQPLKRSKITVKKGGAA-SKG 60
           MIRF K KSL  SADSG+H LLQRCWVS TAKGKSKIKAGQ LKRSKIT+KKGGAA SKG
Sbjct: 1   MIRFAKLKSLVPSADSGSHHLLQRCWVSGTAKGKSKIKAGQQLKRSKITIKKGGAASSKG 60

Query: 61  GDGGGGKKIPPDQEKLYDQCLNAPTPLRFLKAKEREREAKREKLGLISKERQREIDMMKM 120
           G GGGG+KI  +QEKLYDQCLNAPTPLRFLK K+REREA+REKLGLISKERQREI+MMKM
Sbjct: 61  GGGGGGRKISLEQEKLYDQCLNAPTPLRFLKPKDREREAEREKLGLISKERQREIEMMKM 120

Query: 121 DKSKLGISDSPSIIGTPGLDLISLGLVDADKIPKYELTVEDGQRLAKEYSRVLMKQHRAR 180
           DKSKLG+SDSPSIIGT GLDLI+LG+VDADKIPKYELTVEDG+RLAKEYSRVLM++HRAR
Sbjct: 121 DKSKLGVSDSPSIIGTMGLDLITLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRRHRAR 180

Query: 181 RAAETMLLKMKSEAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGYVEKIDEAAKK 240
           +AAE+ LL+MK +AIEALP+HLKAAALVPD+TPFPA+RFMATLTPPIEGY+EKI+E AK+
Sbjct: 181 QAAESTLLRMKKDAIEALPEHLKAAALVPDLTPFPANRFMATLTPPIEGYIEKINEVAKR 240

Query: 241 STGKEKLR 248
           S+GKEKLR
Sbjct: 241 SSGKEKLR 248

[Close]

BLAST of CSPI03G08190 vs. TAIR 10
Match: AT4G05400.1 (copper ion binding )

HSP 1 Score: 276.2 bits (705), Expect = 2.6e-74
Identity = 150/253 (59.29%), Postives = 201/253 (79.45%), Query Frame = 0


Query: 1   MIRFTKFKSLSLSADSGAHQLLQRCWVSRTAKGKSKIKAGQPLKRSKITVKK----GGAA 60
           MIR TK K++    +S ++ L+QRC  S T KGK+K+K GQPLKR+K+++KK    GGA 
Sbjct: 1   MIRVTKPKAI---IESLSYHLIQRCSASGTPKGKAKLKTGQPLKRNKLSIKKGGGGGGAP 60

Query: 61  SKGGDGGGGK-KIPPDQEKLYDQCLNAPTPLRFLKAKEREREAKREKLGLISKERQREID 120
            +G +   GK +I  +++KLY+QCLNAP P+R+L  +E EREA+REKLGLISKE+QR+++
Sbjct: 61  VEGEEAVKGKGRISDEKQKLYEQCLNAPCPVRYLTPQEIEREAQREKLGLISKEKQRDME 120

Query: 121 MMKM-DKSKLGISDSPSIIGTPGLDLISLGLVDADKIPKYELTVEDGQRLAKEYSRVLMK 180
           + K    + +G++D P  IGTPGLD ISLG+ +A+++PKY+LT EDG+RLAKEYS+VLM+
Sbjct: 121 IQKKGGAASMGVTDEPMRIGTPGLDYISLGIFEAEELPKYKLTEEDGERLAKEYSKVLMR 180

Query: 181 QHRARRAAETMLLKMKSEAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGYVEKID 240
           +HR RRAAET LL +K  AIEALP++LK AAL PD+TPFPA+R MATLTPPIEGY+EK+ 
Sbjct: 181 EHRERRAAETALLNLKKSAIEALPENLKKAALEPDLTPFPANRGMATLTPPIEGYLEKVM 240

Query: 241 EAAKKSTGKEKLR 248
           +AAKKS+ KEKLR
Sbjct: 241 DAAKKSSSKEKLR 250

[Close]

BLAST of CSPI03G08190 vs. TAIR 10
Match: AT4G05400.2 (copper ion binding )

HSP 1 Score: 276.2 bits (705), Expect = 2.6e-74
Identity = 150/253 (59.29%), Postives = 201/253 (79.45%), Query Frame = 0


Query: 1   MIRFTKFKSLSLSADSGAHQLLQRCWVSRTAKGKSKIKAGQPLKRSKITVKK----GGAA 60
           MIR TK K++    +S ++ L+QRC  S T KGK+K+K GQPLKR+K+++KK    GGA 
Sbjct: 1   MIRVTKPKAI---IESLSYHLIQRCSASGTPKGKAKLKTGQPLKRNKLSIKKGGGGGGAP 60

Query: 61  SKGGDGGGGK-KIPPDQEKLYDQCLNAPTPLRFLKAKEREREAKREKLGLISKERQREID 120
            +G +   GK +I  +++KLY+QCLNAP P+R+L  +E EREA+REKLGLISKE+QR+++
Sbjct: 61  VEGEEAVKGKGRISDEKQKLYEQCLNAPCPVRYLTPQEIEREAQREKLGLISKEKQRDME 120

Query: 121 MMKM-DKSKLGISDSPSIIGTPGLDLISLGLVDADKIPKYELTVEDGQRLAKEYSRVLMK 180
           + K    + +G++D P  IGTPGLD ISLG+ +A+++PKY+LT EDG+RLAKEYS+VLM+
Sbjct: 121 IQKKGGAASMGVTDEPMRIGTPGLDYISLGIFEAEELPKYKLTEEDGERLAKEYSKVLMR 180

Query: 181 QHRARRAAETMLLKMKSEAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGYVEKID 240
           +HR RRAAET LL +K  AIEALP++LK AAL PD+TPFPA+R MATLTPPIEGY+EK+ 
Sbjct: 181 EHRERRAAETALLNLKKSAIEALPENLKKAALEPDLTPFPANRGMATLTPPIEGYLEKVM 240

Query: 241 EAAKKSTGKEKLR 248
           +AAKKS+ KEKLR
Sbjct: 241 DAAKKSSSKEKLR 250

[Close]

BLAST of CSPI03G08190 vs. TAIR 10
Match: AT4G21140.1 (BEST Arabidopsis thaliana protein match is: copper ion binding (TAIR:AT4G05400.2); Has 41 Blast hits to 41 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 271.6 bits (693), Expect = 6.5e-73
Identity = 148/249 (59.44%), Postives = 192/249 (77.11%), Query Frame = 0


Query: 1   MIRFTKFKSLSLSADSGAHQLLQRCWVSRTAKGKSKIKAGQPLKRSKITVKKGGAASKGG 60
           MIRF + K +    DS ++ LLQ+C+ S T KGKSK+K GQ LKR+K+T+KKGG     G
Sbjct: 1   MIRFARPKPI---IDSVSYNLLQKCYASGTPKGKSKLKTGQSLKRNKLTIKKGGG---NG 60

Query: 61  DGGGGKKIPPDQEKLYDQCLNAPTPLRFLKAKEREREAKREKLGLISKERQREIDMMKMD 120
            G GG ++   + ++ DQC+NAP P+R+L+ KEREREA+REKLGLISK RQ+EID  K  
Sbjct: 61  GGRGGDEVDKGKGRISDQCINAPCPVRYLRPKEREREARREKLGLISKARQKEIDFQKKG 120

Query: 121 KS-KLGISDSPSIIGTPGLDLISLGLVDADKIPKYELTVEDGQRLAKEYSRVLMKQHRAR 180
            S  +G++ +P  IGTPGLD ISLG+   D++PKY++TVEDG RLAKEYSRVLM++HRAR
Sbjct: 121 GSFTMGVTTAPMRIGTPGLDYISLGIFTEDELPKYKVTVEDGIRLAKEYSRVLMREHRAR 180

Query: 181 RAAETMLLKMKSEAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGYVEKI-DEAAK 240
           R AE  L+KM++ A+EALP++LK AALV D+TPFP  R  ATLTPPIEGY+E+I + AA+
Sbjct: 181 RVAEISLMKMRNAAVEALPENLKKAALVRDLTPFPVSRGTATLTPPIEGYLERIMNAAAR 240

Query: 241 KSTGKEKLR 248
           KS+GKEKLR
Sbjct: 241 KSSGKEKLR 243

The following BLAST results are available for this feature:

BLAST of CSPI03G08190 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI03G08190 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L3Z1	2.9e-129	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119830 PE=4 SV=1	[more]
A0A5D3D1D4	1.0e-118	91.90	Copper ion binding isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
E5GCH1	1.0e-118	91.90	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A1S3AVT5	1.0e-118	91.90	uncharacterized protein LOC103483214 OS=Cucumis melo OX=3656 GN=LOC103483214 PE=...	[more]
A0A6J1IYC8	2.2e-108	84.27	uncharacterized protein LOC111479606 OS=Cucurbita maxima OX=3661 GN=LOC111479606...	[more]

BLAST of CSPI03G08190 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004133827.1	6.0e-129	100.00	uncharacterized protein LOC101213243 [Cucumis sativus] >KGN56453.1 hypothetical ...	[more]
XP_008437945.1	2.1e-118	91.90	PREDICTED: uncharacterized protein LOC103483214 [Cucumis melo] >ADN34170.1 hypot...	[more]
XP_038906439.1	9.2e-114	87.45	uncharacterized protein LOC120092349 [Benincasa hispida]	[more]
XP_022980123.1	4.4e-108	84.27	uncharacterized protein LOC111479606 [Cucurbita maxima]	[more]
XP_023527048.1	3.8e-107	83.87	uncharacterized protein LOC111790399 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CSPI03G08190 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G05400.1	2.6e-74	59.29	copper ion binding	[more]
AT4G05400.2	2.6e-74	59.29	copper ion binding	[more]
AT4G21140.1	6.5e-73	59.44	BEST Arabidopsis thaliana protein match is: copper ion binding (TAIR:AT4G05400.2...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 89..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..72
IPR039145	39S ribosomal protein L40, mitochondrial	PANTHER	PTHR13359	39S RIBOSOMAL PROTEIN L40, MITOCHONDRIAL	coord: 1..247

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G08190.1	CSPI03G08190.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005762	mitochondrial large ribosomal subunit