CSPI03G05110 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G05110
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	protein translation factor SUI1 homolog
Location	Chr3: 4149351 .. 4150930 (-)
RNA-Seq Expression	CSPI03G05110
Synteny	CSPI03G05110

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGAATTCATCCTCATCGTCCATCTTTTCCAACCAAAGACTCCATACCCCACCTGGCCACCTCTCTATATATTCTCCTCACCCTCTCCCTTCTCCCCCAACCTTTCCACACTCCCCGTTCTCCTTCCCCTTCACCTTCAGGTACAACTCTCTTCTTCTTTTTCTTCTTCTTTTTCTCCTTCCTTTTGAATTTTCATCTCATACCACTCTGTTCTGCGATGCTTTTGAGTGGGAATTCATCTCGATCACAAATTTAACTGTTGTTTTCTAAGTGTTCTAAATCTTATAAGAAACATCCTTGGTGTTGTGTTCAACTCTTATTTGTCTTCTTTGTTAAGGTGTTGCTTCTTATTAAATTTACCATTTTTAAGCTTTTGGGTTGATTAGTGATTTAGTATGGTTTTGTGTTCAGTTGGAAGAATTTAATTTTCTCTCAGTTAATACTCATTTGATTTCTACTTATTCGCCTTGTACAATTTTTCAAGATCAAAGTCAAGGATTTGATATAAGCCCATTAAGCTTTTAGTGATTTAACAAATCTTTCCTTCATCTTTTCTATATCTATGTTTATCTTCATACACATTTATTGATGAGGTAAGTCAATAAAAAAATGTGTTTATTTTATCTTGAATATAGCTTACTGGTTCACTAGTTTTCATTAGGAACACTGCATTGACGATGCTTACCACATTCTTTTTTACTTGTGTGTTTTAAAATATATCTTCTCTATCAAAAACAATTATCTGCTGATAGCCAATCTGGCTGGTTAAGCTTTCAAGGGTGAATGTTAAATAGTTTTTTTCTTTATGTGGGTTTTGGAAACAGTTTCTTGGGTGCCTTTAGTTACCACAAGCAAATTACATGGTTGATCTAGACGTCCAGATTCCAAGCGCTTTCGATCCCTTCGCTGACGCCAAAGACTCGGATGCCCCCGGAACCAAAGAATACGTCCATATAAGGGTCCAACAGAGGAATGGAAAGAAGTGTCTAACAACAGTTCAAGGGCTTAAGAAAGAGTTCAGCTATGATAAGATCCTCAAGGACCTGAAGAAGGACTTCTGTTGCAATGGGAATGTTGTGCAGGACAAAGAGCTGGGGAAGATAATCCAGCTCCAAGGCGATCAGCGGAAGAACGTCTCTCAGTTCCTTGTTCAGGCCGGGCTTGTCAAGAAGGATCAAATCAAGATACATGGTTTTTAAGCAGGATCCTTAAATTGGTCTGCTGTTTATGCTGTTTGTGTGTGAATTAAGTTTTTAATCAAAGGGTCGTGGGGAGAAGGAGAGATTATATTGATGAATTGTCTTTATATATAGTGCAAGCTAAGTCTGTCTGTTTCTGTTATGGTTTGTTTTTACATTGCATTAACAATAAGAGGATTGCAATGGAATATTATGGCTTCGTTTTATTAATTAGTAAAAAGAATGTTGACAAGAATCTCCCTCACCCTTGGGCCACTTTGAAAAATAGAGATCACAATATAAGTAATCTATTACATAGGCTTACATATAACCATCTCCTAGTGTTATAAAATGCGTTTGAGAATGAAGCCTGTTTTTACCTTTATTATAATTTTAGCAGTG

mRNA sequence

CCGAATTCATCCTCATCGTCCATCTTTTCCAACCAAAGACTCCATACCCCACCTGGCCACCTCTCTATATATTCTCCTCACCCTCTCCCTTCTCCCCCAACCTTTCCACACTCCCCGTTCTCCTTCCCCTTCACCTTCAGTTTCTTGGGTGCCTTTAGTTACCACAAGCAAATTACATGGTTGATCTAGACGTCCAGATTCCAAGCGCTTTCGATCCCTTCGCTGACGCCAAAGACTCGGATGCCCCCGGAACCAAAGAATACGTCCATATAAGGGTCCAACAGAGGAATGGAAAGAAGTGTCTAACAACAGTTCAAGGGCTTAAGAAAGAGTTCAGCTATGATAAGATCCTCAAGGACCTGAAGAAGGACTTCTGTTGCAATGGGAATGTTGTGCAGGACAAAGAGCTGGGGAAGATAATCCAGCTCCAAGGCGATCAGCGGAAGAACGTCTCTCAGTTCCTTGTTCAGGCCGGGCTTGTCAAGAAGGATCAAATCAAGATACATGGTTTTTAAGCAGGATCCTTAAATTGGTCTGCTGTTTATGCTGTTTGTGTGTGAATTAAGTTTTTAATCAAAGGGTCGTGGGGAGAAGGAGAGATTATATTGATGAATTGTCTTTATATATAGTGCAAGCTAAGTCTGTCTGTTTCTGTTATGGTTTGTTTTTACATTGCATTAACAATAAGAGGATTGCAATGGAATATTATGGCTTCGTTTTATTAATTAGTAAAAAGAATGTTGACAAGAATCTCCCTCACCCTTGGGCCACTTTGAAAAATAGAGATCACAATATAAGTAATCTATTACATAGGCTTACATATAACCATCTCCTAGTGTTATAAAATGCGTTTGAGAATGAAGCCTGTTTTTACCTTTATTATAATTTTAGCAGTG

Coding sequence (CDS)

ATGGTTGATCTAGACGTCCAGATTCCAAGCGCTTTCGATCCCTTCGCTGACGCCAAAGACTCGGATGCCCCCGGAACCAAAGAATACGTCCATATAAGGGTCCAACAGAGGAATGGAAAGAAGTGTCTAACAACAGTTCAAGGGCTTAAGAAAGAGTTCAGCTATGATAAGATCCTCAAGGACCTGAAGAAGGACTTCTGTTGCAATGGGAATGTTGTGCAGGACAAAGAGCTGGGGAAGATAATCCAGCTCCAAGGCGATCAGCGGAAGAACGTCTCTCAGTTCCTTGTTCAGGCCGGGCTTGTCAAGAAGGATCAAATCAAGATACATGGTTTTTAA

Protein sequence

MVDLDVQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF*

Homology

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BLAST of CSPI03G05110 vs. ExPASy Swiss-Prot
Match: Q94JV4 (Protein translation factor SUI1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g54290 PE=3 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 6.0e-47
Identity = 92/113 (81.42%), Postives = 101/113 (89.38%), Query Frame = 0


Query: 1   MVDLDVQIPSAFDPFADAKDSDA-PGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKIL 60
           M DL+VQ+P+AFDPFADA   D+  GTKEYVHIRVQQRNG+K LTTVQGLKKE+SY KIL
Sbjct: 1   MSDLEVQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYSKIL 60

Query: 61  KDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           KDLKK+FCCNG VVQD ELG++IQLQGDQRKNVS FLVQAGLVKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

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BLAST of CSPI03G05110 vs. ExPASy Swiss-Prot
Match: P41568 (Protein translation factor SUI1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At4g27130 PE=1 SV=2)

HSP 1 Score: 185.3 bits (469), Expect = 3.9e-46
Identity = 91/113 (80.53%), Postives = 100/113 (88.50%), Query Frame = 0


Query: 1   MVDLDVQIPSAFDPFADAKDSDA-PGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKIL 60
           M +LD Q+P+AFDPFADA   D+  GTKEYVHIRVQQRNG+K LTTVQGLKKE+SY KIL
Sbjct: 1   MSELDSQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKIL 60

Query: 61  KDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           KDLKK+FCCNG VVQD ELG++IQLQGDQRKNVS FLVQAGLVKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

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BLAST of CSPI03G05110 vs. ExPASy Swiss-Prot
Match: O82569 (Protein translation factor SUI1 homolog OS=Pimpinella brachycarpa OX=45043 PE=3 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 6.7e-46
Identity = 89/113 (78.76%), Postives = 101/113 (89.38%), Query Frame = 0


Query: 1   MVDLDVQIPSAFDPFADAKDSDAPG-TKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKIL 60
           MVD D+QIP++FDPFA+A+ +DA G TKEYVHIR+QQRNG+K LTTVQGLKKE SYDKIL
Sbjct: 1   MVDSDIQIPTSFDPFAEAEITDATGSTKEYVHIRIQQRNGRKSLTTVQGLKKELSYDKIL 60

Query: 61  KDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           KDLKK  CCNG VV DKELGK+IQLQGDQRKNVS F+VQAG+VKKDQIK+H F
Sbjct: 61  KDLKKALCCNGTVVNDKELGKVIQLQGDQRKNVSTFIVQAGIVKKDQIKVHNF 113

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BLAST of CSPI03G05110 vs. ExPASy Swiss-Prot
Match: A6MZM2 (Protein translation factor SUI1 homolog OS=Oryza sativa subsp. indica OX=39946 GN=GOS2 PE=2 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 8.7e-46
Identity = 88/115 (76.52%), Postives = 102/115 (88.70%), Query Frame = 0


Query: 1   MVDLDVQIPSAFDPFADAKDSD---APGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDK 60
           M DLD+QIP+AFDPFA+A   D   A G+K+YVH+R+QQRNG+K LTTVQGLKKEFSY+K
Sbjct: 1   MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNK 60

Query: 61  ILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           ILKDLKK+FCCNG VVQD ELG++IQLQGDQRKNVS FLVQAG+VKK+ IKIHGF
Sbjct: 61  ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115

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BLAST of CSPI03G05110 vs. ExPASy Swiss-Prot
Match: Q0D5W6 (Protein translation factor SUI1 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=GOS2 PE=3 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 8.7e-46
Identity = 88/115 (76.52%), Postives = 102/115 (88.70%), Query Frame = 0


Query: 1   MVDLDVQIPSAFDPFADAKDSD---APGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDK 60
           M DLD+QIP+AFDPFA+A   D   A G+K+YVH+R+QQRNG+K LTTVQGLKKEFSY+K
Sbjct: 1   MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNK 60

Query: 61  ILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           ILKDLKK+FCCNG VVQD ELG++IQLQGDQRKNVS FLVQAG+VKK+ IKIHGF
Sbjct: 61  ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115

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BLAST of CSPI03G05110 vs. ExPASy TrEMBL
Match: A0A5D3BUS5 (SUI1 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold925G00240 PE=3 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 8.7e-57
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MVDLDVQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 60
           MVDLDVQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK
Sbjct: 1   MVDLDVQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 60

Query: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

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BLAST of CSPI03G05110 vs. ExPASy TrEMBL
Match: A0A0A0L7M8 (SUI1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G077610 PE=3 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 8.7e-57
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MVDLDVQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 60
           MVDLDVQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK
Sbjct: 1   MVDLDVQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 60

Query: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

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BLAST of CSPI03G05110 vs. ExPASy TrEMBL
Match: A0A1S4E468 (protein translation factor SUI1 homolog 2 OS=Cucumis melo OX=3656 GN=LOC103501585 PE=3 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 8.7e-57
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MVDLDVQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 60
           MVDLDVQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK
Sbjct: 1   MVDLDVQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 60

Query: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

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BLAST of CSPI03G05110 vs. ExPASy TrEMBL
Match: A0A5D3DHR8 (SUI1 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G001030 PE=3 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 1.8e-54
Identity = 107/112 (95.54%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 1   MVDLDVQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 60
           MV+LD QIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSY+KILK
Sbjct: 39  MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 98

Query: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           D+KK+FCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 99  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 150

[Close]

BLAST of CSPI03G05110 vs. ExPASy TrEMBL
Match: A0A0A0K771 (SUI1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G209580 PE=3 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 1.8e-54
Identity = 107/112 (95.54%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 1   MVDLDVQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 60
           MV+LD QIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSY+KILK
Sbjct: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60

Query: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           D+KK+FCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

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BLAST of CSPI03G05110 vs. NCBI nr
Match: XP_016903023.1 (PREDICTED: protein translation factor SUI1 homolog 2 [Cucumis melo] >XP_031739416.1 protein translation factor SUI1 homolog 2 [Cucumis sativus] >KAA0033974.1 SUI1 domain-containing protein [Cucumis melo var. makuwa] >KGN56126.1 hypothetical protein Csa_011317 [Cucumis sativus] >TYK02572.1 SUI1 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 229.2 bits (583), Expect = 1.8e-56
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MVDLDVQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 60
           MVDLDVQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK
Sbjct: 1   MVDLDVQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 60

Query: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

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BLAST of CSPI03G05110 vs. NCBI nr
Match: XP_038903171.1 (protein translation factor SUI1 homolog 2-like [Benincasa hispida])

HSP 1 Score: 228.0 bits (580), Expect = 4.0e-56
Identity = 111/112 (99.11%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MVDLDVQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 60
           MVDLDVQIP+AFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK
Sbjct: 1   MVDLDVQIPTAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 60

Query: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

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BLAST of CSPI03G05110 vs. NCBI nr
Match: XP_004139787.1 (protein translation factor SUI1 homolog 1 [Cucumis sativus] >XP_008447738.1 PREDICTED: protein translation factor SUI1 homolog 1-like [Cucumis melo] >XP_038899382.1 protein translation factor SUI1 homolog 1-like [Benincasa hispida] >KGN44162.1 hypothetical protein Csa_015864 [Cucumis sativus])

HSP 1 Score: 221.5 bits (563), Expect = 3.7e-54
Identity = 107/112 (95.54%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 1   MVDLDVQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 60
           MV+LD QIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSY+KILK
Sbjct: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60

Query: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           D+KK+FCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]

BLAST of CSPI03G05110 vs. NCBI nr
Match: XP_022150982.1 (protein translation factor SUI1 homolog 2-like [Momordica charantia])

HSP 1 Score: 221.5 bits (563), Expect = 3.7e-54
Identity = 106/112 (94.64%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 1   MVDLDVQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 60
           MVDLDV+IP+AF+PFADAKDSDAPG KEYVH+RVQQRNGKKCLTTVQGLKK+FSYDKILK
Sbjct: 1   MVDLDVEIPTAFNPFADAKDSDAPGNKEYVHVRVQQRNGKKCLTTVQGLKKDFSYDKILK 60

Query: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]

BLAST of CSPI03G05110 vs. NCBI nr
Match: KAA0025154.1 (SUI1 domain-containing protein [Cucumis melo var. makuwa] >TYK23112.1 SUI1 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 221.5 bits (563), Expect = 3.7e-54
Identity = 107/112 (95.54%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 1   MVDLDVQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 60
           MV+LD QIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSY+KILK
Sbjct: 39  MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 98

Query: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           D+KK+FCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 99  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 150

[Close]

BLAST of CSPI03G05110 vs. TAIR 10
Match: AT5G54940.1 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 204.5 bits (519), Expect = 4.4e-53
Identity = 96/112 (85.71%), Postives = 106/112 (94.64%), Query Frame = 0


Query: 1   MVDLDVQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 60
           MV+LD+QIPSA+DPFA+AKDSDAPG KE +HIR+QQRNGKK LTTVQGLKKE+SY++ILK
Sbjct: 1   MVELDIQIPSAYDPFAEAKDSDAPGAKENIHIRIQQRNGKKSLTTVQGLKKEYSYERILK 60

Query: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           DLKKDFCCNGNVVQDKELGKIIQLQGDQRK VSQFLVQ G+ KKDQIKIHGF
Sbjct: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKKVSQFLVQTGIAKKDQIKIHGF 112

[Close]

BLAST of CSPI03G05110 vs. TAIR 10
Match: AT5G54940.2 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 204.5 bits (519), Expect = 4.4e-53
Identity = 96/112 (85.71%), Postives = 106/112 (94.64%), Query Frame = 0


Query: 1   MVDLDVQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 60
           MV+LD+QIPSA+DPFA+AKDSDAPG KE +HIR+QQRNGKK LTTVQGLKKE+SY++ILK
Sbjct: 1   MVELDIQIPSAYDPFAEAKDSDAPGAKENIHIRIQQRNGKKSLTTVQGLKKEYSYERILK 60

Query: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           DLKKDFCCNGNVVQDKELGKIIQLQGDQRK VSQFLVQ G+ KKDQIKIHGF
Sbjct: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKKVSQFLVQTGIAKKDQIKIHGF 112

[Close]

BLAST of CSPI03G05110 vs. TAIR 10
Match: AT1G54290.1 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 188.0 bits (476), Expect = 4.3e-48
Identity = 92/113 (81.42%), Postives = 101/113 (89.38%), Query Frame = 0


Query: 1   MVDLDVQIPSAFDPFADAKDSDA-PGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKIL 60
           M DL+VQ+P+AFDPFADA   D+  GTKEYVHIRVQQRNG+K LTTVQGLKKE+SY KIL
Sbjct: 1   MSDLEVQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYSKIL 60

Query: 61  KDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           KDLKK+FCCNG VVQD ELG++IQLQGDQRKNVS FLVQAGLVKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

[Close]

BLAST of CSPI03G05110 vs. TAIR 10
Match: AT4G27130.1 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 185.3 bits (469), Expect = 2.8e-47
Identity = 91/113 (80.53%), Postives = 100/113 (88.50%), Query Frame = 0


Query: 1   MVDLDVQIPSAFDPFADAKDSDA-PGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKIL 60
           M +LD Q+P+AFDPFADA   D+  GTKEYVHIRVQQRNG+K LTTVQGLKKE+SY KIL
Sbjct: 1   MSELDSQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKIL 60

Query: 61  KDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           KDLKK+FCCNG VVQD ELG++IQLQGDQRKNVS FLVQAGLVKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

[Close]

BLAST of CSPI03G05110 vs. TAIR 10
Match: AT5G54760.1 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 184.9 bits (468), Expect = 3.6e-47
Identity = 91/113 (80.53%), Postives = 100/113 (88.50%), Query Frame = 0


Query: 1   MVDLDVQIPSAFDPFADAKDSDA-PGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKIL 60
           M +LD Q+P+AFDPFADA   D+  GTKEYVHIRVQQRNG+K LTTVQGLKKE+SY KIL
Sbjct: 1   MSELDSQVPTAFDPFADANVEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKIL 60

Query: 61  KDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 113
           KDLKK+FCCNG VVQD ELG++IQLQGDQRKNVS FLVQAGLVKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

The following BLAST results are available for this feature:

BLAST of CSPI03G05110 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94JV4	6.0e-47	81.42	Protein translation factor SUI1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1...	[more]
P41568	3.9e-46	80.53	Protein translation factor SUI1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At4...	[more]
O82569	6.7e-46	78.76	Protein translation factor SUI1 homolog OS=Pimpinella brachycarpa OX=45043 PE=3 ...	[more]
A6MZM2	8.7e-46	76.52	Protein translation factor SUI1 homolog OS=Oryza sativa subsp. indica OX=39946 G...	[more]
Q0D5W6	8.7e-46	76.52	Protein translation factor SUI1 homolog OS=Oryza sativa subsp. japonica OX=39947...	[more]

BLAST of CSPI03G05110 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BUS5	8.7e-57	100.00	SUI1 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A0A0L7M8	8.7e-57	100.00	SUI1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G077610 PE=3 S...	[more]
A0A1S4E468	8.7e-57	100.00	protein translation factor SUI1 homolog 2 OS=Cucumis melo OX=3656 GN=LOC10350158...	[more]
A0A5D3DHR8	1.8e-54	95.54	SUI1 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A0A0K771	1.8e-54	95.54	SUI1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G209580 PE=3 S...	[more]

BLAST of CSPI03G05110 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016903023.1	1.8e-56	100.00	PREDICTED: protein translation factor SUI1 homolog 2 [Cucumis melo] >XP_03173941...	[more]
XP_038903171.1	4.0e-56	99.11	protein translation factor SUI1 homolog 2-like [Benincasa hispida]	[more]
XP_004139787.1	3.7e-54	95.54	protein translation factor SUI1 homolog 1 [Cucumis sativus] >XP_008447738.1 PRED...	[more]
XP_022150982.1	3.7e-54	94.64	protein translation factor SUI1 homolog 2-like [Momordica charantia]	[more]
KAA0025154.1	3.7e-54	95.54	SUI1 domain-containing protein [Cucumis melo var. makuwa] >TYK23112.1 SUI1 domai...	[more]

BLAST of CSPI03G05110 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G54940.1	4.4e-53	85.71	Translation initiation factor SUI1 family protein	[more]
AT5G54940.2	4.4e-53	85.71	Translation initiation factor SUI1 family protein	[more]
AT1G54290.1	4.3e-48	81.42	Translation initiation factor SUI1 family protein	[more]
AT4G27130.1	2.8e-47	80.53	Translation initiation factor SUI1 family protein	[more]
AT5G54760.1	3.6e-47	80.53	Translation initiation factor SUI1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005874	Eukaryotic translation initiation factor SUI1	TIGRFAM	TIGR01160	TIGR01160	coord: 5..112 e-value: 3.2E-53 score: 176.9
IPR005874	Eukaryotic translation initiation factor SUI1	PIRSF	PIRSF004499	Transl_init_SUI1_Euk	coord: 1..112 e-value: 3.4E-47 score: 157.3
IPR005874	Eukaryotic translation initiation factor SUI1	CDD	cd11566	eIF1_SUI1	coord: 28..111 e-value: 5.94194E-48 score: 146.141
IPR001950	SUI1 domain	PFAM	PF01253	SUI1	coord: 27..101 e-value: 1.0E-24 score: 86.8
IPR001950	SUI1 domain	PROSITE	PS50296	SUI1	coord: 30..100 score: 23.002235
None	No IPR available	GENE3D	3.30.780.10		coord: 2..112 e-value: 9.0E-46 score: 157.2
None	No IPR available	PANTHER	PTHR10388:SF56	BNAA10G09260D PROTEIN	coord: 1..112
None	No IPR available	PANTHER	PTHR10388	EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1	coord: 1..112
IPR036877	SUI1 domain superfamily	SUPERFAMILY	55159	eIF1-like	coord: 3..112

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G05110.1	CSPI03G05110.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006413	translational initiation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003743	translation initiation factor activity