CSPI03G04550 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAAGATTTTTGCTTCCTTTCGCCTTCTATTCTACTTTGATTTTGGACTTCAATTTTCTGGAATTTGCCCGACATTGCATTGGATTGGGTTTCTCTGATCAGAATTGTAGATTATTTTGATTGATTTTTGTTCGGTTTTTCTTTTGGTAAGATGAATGAGAGAAGTAGAATTGTTCATCTGATTATGTCATATGGTTAGTTGTCATCATTTTCCGTTGTATTTTCTTCCCATTTTTATTTTTTAATATTTGTGGTCGATGGTTATTATAAATTGGCTATACTCATACTCATGTTGATATTATGAATTTTGAATATTTGATCATGTCATTTGGAAATTTTTAACTCACTCACCATTGGTTAGCTTAATGGTCAATAATGACTGATGTAACTTGTTAAGTAATAAAGAGCTTGATGAGATTGAGTTTAAATCAAGGCGTTCATCTGAAAAAATATCATAATGTGGACTAGGGTTTTAGGATTAGGTTGAGGACATGCAAACTCGCTTTGATTCTCTCTAATTTAAAGAAAAAATTTGTGAAAAAACATTTAGCTGCTTGTTTTTGGACAGATCATAGTTTATACCTTGTACATTGATTTTAGGTGTATTTGTTAGTCTAAATAATGGAGATGATAAGAGTTCATTTTACTGTTATTAATGTGTTTCTGCTTGTTAGGTTGATGATGGCACCTTCTGATTTATGGATAAAGGAATATAATGAAGCTTCTAAGCTTGGTGATGATATCAATGGCATGATTTCTGAAAGGAGTTCCTTTCCTGCAACTGGACCAGAATTCCAACGTCATGCTTCGGCCATTCGGAGGAAGATCACAATTTTGGGGACTAAAGTTGATGGCTTACAGTCCCTTTTGTTGAAACTTCCTGTAAAGCAGCCCCTGTATGTTGTATCTTAGATTGAATTTAGCGAAATTCTTATTTGCATAGTGCTATAATAATGTTATAGCGTGTTGGTTTGGCTTCTGTTTTTGTCATGCATATACTCCTTTGAATTAAACGTTGAGTATAATTATTCATATGAAGTCTAACCTTGGGATTTAGATGATTTTCCGTGTTCTAGAGGAATGAGTAGTTGAGAATGATATATACACAAATTAATTTCAGTTATAGTTTTTAGTTAGACTAGTTCATTATTAGACCAAGTACATTTTTGGTTTTGAGGTATGAGTTCAGTGTCTATCCCTGAGACATCAAAAGAAACATTGGTTTTGAGATTTGGAAGATGGAGCTATAAATGACGCAAAATAACATTATATCTTTGAGGGGAAATTTTTAAATGATGTGGTGGCTTTTATTTATATTTGTACTTTTTATTAGTTTTAGTTCACGTGCCTTTCTCTCTCTCTTCTCCTTCTCCATCTTCAGTGAATTTCCATTGCCAAACTCCCAGTTGCCTCCACAAGAAATACCATTGCTCTCCTTCCTCATCACTACTACATCATAGTATGAGAGTTACTAAGGGGAGGGGAGTAAGACGAGGGAGTTCTTTCCAGATTTGTCCTTTGACTTTGATTCATGCTTCAACAAAAACACGAAAACTATTTTTCGAACCTCAAGAGCGAAAGAAACACAAAGCCAAAATCTTTTGGGACCAAAATTGAATTTATTTTCTCTGAATTGTTATATAATTTTGAACCATAATTCTAATTCCTAAGTCCAAGTTTCGTCATTTCTTGTGGTATGCAGGTCTGAAAAGGAGATAAATCGACGTAAAGACATGCTTGTTCAGATGAGATCAAAAGTAAAGCAGATGGCCTCAACGTTGAACATGTCAAACTTTGCTAACCGAGACAGTTTACTTGGCCCAGAGATGAAATCGGCAGATGTAATGAGCAAGACAGCTGAACTAGACAATCAAGGACTTGTTGGTTTTCAAAGAAAAATCATGAAGGGTAAGTTTGTTGGACAACTCTAGTCTCACAATTTTTATATACTTCCCTTTTGGGTCGTCCCTGATATGATTTTGAAACAGAGCAAGATGAAGGTCTTGAAAAGCTGGAGGAGACTATTACAAGTACAAAACATATTGCATTAGCAGTCAATGAAGAACTCAGTCTTCACACTCGCCTAATTGTATGATTTCTTGTTTGCTTTATGCATTATGTAATACTTCATTTTGTGTCAGCTAGATTTGGTTTTACATGTCATCTAATTGTCCTTTTCTCTACAGGATGACTTGGATCAACATGTTGATGTTACAGACTCTCAATTAGCGGTAAAATCCTTATCTACTATTCTTTGTTGGCTATAGATCTCTTTAGGATGTAGAGGTAAATCCTCACTAGTCGAAGTTAAATGTAGTAATATTCATGTAAGTGATGCCTCTTTCACAACAATGACAAGAAAATTTGATTAATTGGTATGGGCATGCTACGTTGCACACGAAACTGACTGTTATAAAAGAATATTCAACTGAAGAAACCTGATGATCATTTGTGTCCGAGGATTTTGAGATAGTGTGAGATAAAAGGTAACCAAACTACAAGGTAAACCGGTATATAGACCCCTTCCCTTTCTTGAGATCTCCCTCAAGTCCTAAATCACTCACTGAAATGTTGTTTGCTTTCTTCCTTCTATTAACATTTGTTACATGTTGATCTCAAAGAAGCCAATATCTTGGAAGGATCTGTGCATTTCCATATTTCCATAATAACACGATATTATCTAACTTTATAAGCTCTCCTTACATGGTTTTACTTTAAGATGTTATCCCAAAGACTCAGTACCTACAGAGATTATTGTTCTTACTAGCTGTATATATACACATTTGTACACACACACATATCATCAAGGTTGTTCCAGACCTCTAGTGAACGCGAGACTATGTATGATTTCATAACAATCTTCACATCAAATCAAAGATAAACAAGCATTAAATTTATTCAAATTATCTGTGCAGAGGGTGCAGAAGAGGTTGGGTATAATGAACAAGCGAGCAAAGGGGAGCTGCTCTTGCTTTGGAATGCTTCTGTCTGTGGTTGGTATTGTGGTTCTTATCACTGTCATATGGCTGCTCGTCCAATACTTGTAAATGTTAAACAATCATATGGGTATATAAGATTTTTCACTTTATGATTAATATCAAATGCAG TAAGATTTTTGCTTCCTTTCGCCTTCTATTCTACTTTGATTTTGGACTTCAATTTTCTGGAATTTGCCCGACATTGCATTGGATTGGGTTTCTCTGATCAGAATTGTAGATTATTTTGATTGATTTTTGTTCGGTTTTTCTTTTGGTTGATGATGGCACCTTCTGATTTATGGATAAAGGAATATAATGAAGCTTCTAAGCTTGGTGATGATATCAATGGCATGATTTCTGAAAGGAGTTCCTTTCCTGCAACTGGACCAGAATTCCAACGTCATGCTTCGGCCATTCGGAGGAAGATCACAATTTTGGGGACTAAAGTTGATGGCTTACAGTCCCTTTTGTTGAAACTTCCTGTAAAGCAGCCCCTGTCTGAAAAGGAGATAAATCGACGTAAAGACATGCTTGTTCAGATGAGATCAAAAGTAAAGCAGATGGCCTCAACGTTGAACATGTCAAACTTTGCTAACCGAGACAGTTTACTTGGCCCAGAGATGAAATCGGCAGATGTAATGAGCAAGACAGCTGAACTAGACAATCAAGGACTTGTTGGTTTTCAAAGAAAAATCATGAAGGAGCAAGATGAAGGTCTTGAAAAGCTGGAGGAGACTATTACAAGTACAAAACATATTGCATTAGCAGTCAATGAAGAACTCAGTCTTCACACTCGCCTAATTGATGACTTGGATCAACATGTTGATGTTACAGACTCTCAATTAGCGAGGGTGCAGAAGAGGTTGGGTATAATGAACAAGCGAGCAAAGGGGAGCTGCTCTTGCTTTGGAATGCTTCTGTCTGTGGTTGGTATTGTGGTTCTTATCACTGTCATATGGCTGCTCGTCCAATACTTGTAAATGTTAAACAATCATATGGGTATATAAGATTTTTCACTTTATGATTAATATCAAATGCAG ATGATGGCACCTTCTGATTTATGGATAAAGGAATATAATGAAGCTTCTAAGCTTGGTGATGATATCAATGGCATGATTTCTGAAAGGAGTTCCTTTCCTGCAACTGGACCAGAATTCCAACGTCATGCTTCGGCCATTCGGAGGAAGATCACAATTTTGGGGACTAAAGTTGATGGCTTACAGTCCCTTTTGTTGAAACTTCCTGTAAAGCAGCCCCTGTCTGAAAAGGAGATAAATCGACGTAAAGACATGCTTGTTCAGATGAGATCAAAAGTAAAGCAGATGGCCTCAACGTTGAACATGTCAAACTTTGCTAACCGAGACAGTTTACTTGGCCCAGAGATGAAATCGGCAGATGTAATGAGCAAGACAGCTGAACTAGACAATCAAGGACTTGTTGGTTTTCAAAGAAAAATCATGAAGGAGCAAGATGAAGGTCTTGAAAAGCTGGAGGAGACTATTACAAGTACAAAACATATTGCATTAGCAGTCAATGAAGAACTCAGTCTTCACACTCGCCTAATTGATGACTTGGATCAACATGTTGATGTTACAGACTCTCAATTAGCGAGGGTGCAGAAGAGGTTGGGTATAATGAACAAGCGAGCAAAGGGGAGCTGCTCTTGCTTTGGAATGCTTCTGTCTGTGGTTGGTATTGTGGTTCTTATCACTGTCATATGGCTGCTCGTCCAATACTTGTAA MMAPSDLWIKEYNEASKLGDDINGMISERSSFPATGPEFQRHASAIRRKITILGTKVDGLQSLLLKLPVKQPLSEKEINRRKDMLVQMRSKVKQMASTLNMSNFANRDSLLGPEMKSADVMSKTAELDNQGLVGFQRKIMKEQDEGLEKLEETITSTKHIALAVNEELSLHTRLIDDLDQHVDVTDSQLARVQKRLGIMNKRAKGSCSCFGMLLSVVGIVVLITVIWLLVQYL* Homology
BLAST of CSPI03G04550 vs. ExPASy Swiss-Prot
Match: Q94KK7 (Syntaxin-52 OS=Arabidopsis thaliana OX=3702 GN=SYP52 PE=1 SV=1) HSP 1 Score: 299.7 bits (766), Expect = 2.9e-80 Identity = 156/233 (66.95%), Postives = 191/233 (81.97%), Query Frame = 0
BLAST of CSPI03G04550 vs. ExPASy Swiss-Prot
Match: Q9SA23 (Syntaxin-51 OS=Arabidopsis thaliana OX=3702 GN=SYP51 PE=1 SV=1) HSP 1 Score: 294.3 bits (752), Expect = 1.2e-78 Identity = 154/233 (66.09%), Postives = 187/233 (80.26%), Query Frame = 0
BLAST of CSPI03G04550 vs. ExPASy Swiss-Prot
Match: Q54IX6 (Probable syntaxin-8B OS=Dictyostelium discoideum OX=44689 GN=syn8B PE=3 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 1.5e-12 Identity = 62/233 (26.61%), Postives = 114/233 (48.93%), Query Frame = 0
BLAST of CSPI03G04550 vs. ExPASy Swiss-Prot
Match: Q9Z2Q7 (Syntaxin-8 OS=Rattus norvegicus OX=10116 GN=Stx8 PE=1 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 1.0e-11 Identity = 66/243 (27.16%), Postives = 124/243 (51.03%), Query Frame = 0
BLAST of CSPI03G04550 vs. ExPASy Swiss-Prot
Match: O88983 (Syntaxin-8 OS=Mus musculus OX=10090 GN=Stx8 PE=1 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 2.9e-11 Identity = 65/243 (26.75%), Postives = 124/243 (51.03%), Query Frame = 0
BLAST of CSPI03G04550 vs. ExPASy TrEMBL
Match: A0A0A0L4X9 (t-SNARE coiled-coil homology domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G064180 PE=4 SV=1) HSP 1 Score: 426.8 bits (1096), Expect = 5.9e-116 Identity = 229/233 (98.28%), Postives = 229/233 (98.28%), Query Frame = 0
BLAST of CSPI03G04550 vs. ExPASy TrEMBL
Match: A0A5D3BCA7 (Syntaxin-51-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G002180 PE=4 SV=1) HSP 1 Score: 415.6 bits (1067), Expect = 1.4e-112 Identity = 221/233 (94.85%), Postives = 226/233 (97.00%), Query Frame = 0
BLAST of CSPI03G04550 vs. ExPASy TrEMBL
Match: A0A1S3BLB5 (syntaxin-51-like OS=Cucumis melo OX=3656 GN=LOC103491069 PE=4 SV=1) HSP 1 Score: 415.2 bits (1066), Expect = 1.8e-112 Identity = 221/232 (95.26%), Postives = 225/232 (96.98%), Query Frame = 0
BLAST of CSPI03G04550 vs. ExPASy TrEMBL
Match: A0A5A7VFH6 (Syntaxin-51-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold37G001240 PE=4 SV=1) HSP 1 Score: 407.9 bits (1047), Expect = 2.8e-110 Identity = 220/235 (93.62%), Postives = 225/235 (95.74%), Query Frame = 0
BLAST of CSPI03G04550 vs. ExPASy TrEMBL
Match: A0A6J1EVS2 (syntaxin-52-like OS=Cucurbita moschata OX=3662 GN=LOC111438590 PE=4 SV=1) HSP 1 Score: 404.4 bits (1038), Expect = 3.1e-109 Identity = 213/232 (91.81%), Postives = 222/232 (95.69%), Query Frame = 0
BLAST of CSPI03G04550 vs. NCBI nr
Match: XP_004149588.1 (syntaxin-52 [Cucumis sativus] >XP_031737716.1 syntaxin-52 [Cucumis sativus] >XP_031737717.1 syntaxin-52 [Cucumis sativus] >KAE8650116.1 hypothetical protein Csa_011267 [Cucumis sativus]) HSP 1 Score: 437.6 bits (1124), Expect = 6.9e-119 Identity = 232/233 (99.57%), Postives = 232/233 (99.57%), Query Frame = 0
BLAST of CSPI03G04550 vs. NCBI nr
Match: TYJ96556.1 (syntaxin-51-like [Cucumis melo var. makuwa]) HSP 1 Score: 415.6 bits (1067), Expect = 2.8e-112 Identity = 221/233 (94.85%), Postives = 226/233 (97.00%), Query Frame = 0
BLAST of CSPI03G04550 vs. NCBI nr
Match: XP_008449105.1 (PREDICTED: syntaxin-51-like [Cucumis melo] >XP_008449106.1 PREDICTED: syntaxin-51-like [Cucumis melo] >XP_008449108.1 PREDICTED: syntaxin-51-like [Cucumis melo] >XP_008449109.1 PREDICTED: syntaxin-51-like [Cucumis melo]) HSP 1 Score: 415.2 bits (1066), Expect = 3.7e-112 Identity = 221/232 (95.26%), Postives = 225/232 (96.98%), Query Frame = 0
BLAST of CSPI03G04550 vs. NCBI nr
Match: XP_038903152.1 (syntaxin-52-like [Benincasa hispida] >XP_038903153.1 syntaxin-52-like [Benincasa hispida] >XP_038903154.1 syntaxin-52-like [Benincasa hispida] >XP_038903156.1 syntaxin-52-like [Benincasa hispida]) HSP 1 Score: 409.5 bits (1051), Expect = 2.0e-110 Identity = 215/232 (92.67%), Postives = 224/232 (96.55%), Query Frame = 0
BLAST of CSPI03G04550 vs. NCBI nr
Match: KAA0065817.1 (syntaxin-51-like [Cucumis melo var. makuwa]) HSP 1 Score: 407.9 bits (1047), Expect = 5.8e-110 Identity = 220/235 (93.62%), Postives = 225/235 (95.74%), Query Frame = 0
BLAST of CSPI03G04550 vs. TAIR 10
Match: AT1G79590.1 (syntaxin of plants 52 ) HSP 1 Score: 299.7 bits (766), Expect = 2.1e-81 Identity = 156/233 (66.95%), Postives = 191/233 (81.97%), Query Frame = 0
BLAST of CSPI03G04550 vs. TAIR 10
Match: AT1G79590.2 (syntaxin of plants 52 ) HSP 1 Score: 299.7 bits (766), Expect = 2.1e-81 Identity = 156/233 (66.95%), Postives = 191/233 (81.97%), Query Frame = 0
BLAST of CSPI03G04550 vs. TAIR 10
Match: AT1G16240.1 (syntaxin of plants 51 ) HSP 1 Score: 294.3 bits (752), Expect = 8.8e-80 Identity = 154/233 (66.09%), Postives = 187/233 (80.26%), Query Frame = 0
BLAST of CSPI03G04550 vs. TAIR 10
Match: AT1G16240.2 (syntaxin of plants 51 ) HSP 1 Score: 294.3 bits (752), Expect = 8.8e-80 Identity = 154/233 (66.09%), Postives = 187/233 (80.26%), Query Frame = 0
BLAST of CSPI03G04550 vs. TAIR 10
Match: AT1G16240.3 (syntaxin of plants 51 ) HSP 1 Score: 246.9 bits (629), Expect = 1.6e-65 Identity = 128/194 (65.98%), Postives = 157/194 (80.93%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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