CSPI03G04530 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G04530
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	serine/arginine-rich splicing factor RS40-like isoform X1
Location	Chr3: 3683150 .. 3688346 (-)
RNA-Seq Expression	CSPI03G04530
Synteny	CSPI03G04530

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTGTACTAAAAATACAAACAATAATAGGAAAAAATAAAATAATCACAAATCATATTTTTTATAAATTAAAATTAAGGATTAAAAAAAAAAGAATTAAGAAAAAAGAGACTACAAGCAACCCAGCGGTTCGCACTTGTCTCTTTCTCTTGCAATTCTCATTTCTCTCCGGCAGCGGCTACTACGACGGCGACGCGGCTTCTCTCGGGTCACGACCAGGTGACGGCGCAACCCACCTCAGATCTACAATACAACCCACCTCCAGCGTTTGATCGCCTACGCAACAACGTATCTCCGCCACACTCGGATCTGCAACGGCCTCACCTCGGGTCGCTGGATCTGGCTACACACACATCTCGACGGGTCCGATCTACGGTGGAAAGTCATTCGGACGACGATCGAGACTCGCGGTAAGTAACTCAGTGTCTCAGTTCTCCTTCGGTTACGATTTCGCAAGATCCAAGTCGGCAGCGACGGTTTCAGGAACTCGAACAATTAGCAATTGAAGCACATTAAGGAGGAACATAGTAAGTGTTTCTCATTTTAGGACTTTTTGATTCTATGACTTAAATTTTCTTGTATGCTTCTGGTTGCGCATCAAATTGTGTTGTGAATTGTATGTTTGGATATGTTTGGGAACGAACACTTTTCTTTTCTTATTTTTTTCTCTTTTCATTTTATCACAGTTGCTTATGTTAATGTCAAATTGTATATTTTTCTGTTAACTGTTAGGTTGATAGTTGAAATTATGGAGTTCCATTGGATGATTATGGTCGGCCATTTACAAGAATGATACCTCTGTAACCATATGATTGACCTACTGAAAAATGAAAACATGACCTAATTAGAAGAGATAGGTGATGCGTTAAATCTATGGTAGACCACATACTTGGTATTTATTATTTACGGGTTTTTTTTTAATTCAAATGTTGTGATTGTTAGACACATTGCTGTGAGATTAGTTGAGGTGCTTGTAAGCTTGTCTTATAGTTACAAATATATAAAAAAAAGGGAAAGGATGATACCTCTGTAGTGATGATCAATGAGACTAGATGAGCTTGTCTAAGAATGATACCTGGTGTTTTGCTCTAGGCTCCAGAAAGCATTTTTATAGCACTAAAAGTTGTGGTTGCAAGTGGTTAGAATTTGGAAATTAGAACCTCAAATGTTGGATATAGCTGGTCAAACTTGTAAAGCCTTTTATATGAACCAAAAGGTCATATATTTATTTCCTTTTCCCCTTCTCTCTTTGTCAATCATGGTTCCTCACTTATGATATCTACTTCAAATATTAAAACAGTTATTATTATTCAGATGAACAATGCCTGAAAGCGTTTTATGATGGTTTCAGTTTTGGACTCTGTTAACCACAAACTGCAAGTTTTTTTTTTAAAAAAATTTTCTTTTGGGGAATTAGTTAAATAGCAAATAAAAACATTACATGGGAAAACAATGTTAATTGATTAATTACGATTTTGTACACTGTACTTACAATTCAGATATCCAAATTTAGTCTCAACTCATAATACTTGAAATTTGTCCTCACTGTTTGTTTATTGTTTATTTTTTGTTTTATTATGTTAAGTCTTAATTAACCTTCCCTCTATCATTTTTGAAAACACATTCACAGTTGTCTTTTCTTGAATGGAATGAGATCACAAGTATAAGGATCAGAAGAGAATTATTTATAATTTTAAAAACCAAACGATAATGTATCACATTTAGAAGTGTTGCAGTACTATAAATATTATTTTTTTAAGAAGCAATTCTTTAGGAAAAACAATTTGACACAGGCTTGATCAACTTATTTGAAGCTTAAGTACTGCATACTTGTTGTTGATTCTTAAATACGTACTTCACTTTTTACAATTCATTTCAAATAACTTTCTTGTTGATGTGGTGAAACTAGGTTTCGGGAACTATGATGCCTTTGTATATCTTCATTTTTTATTTTTACAGAAGTAATAATAGGATATATATGCTGTATTATTTTTTATATAAATATAATATAAAAGTACCGATATATTTAAAAGTACAATATCTTGTATGTTATTTTGTAAATTTGGACACAGGCTTATTTGCAAAAGGCAAGTGCATCATGGTTATGATTTTTTTTTTTTCACTCGGGATTATTTTCAAATAGTTGATATCTGGTTCCCTTTTGCAGTTCACGTTTCTTTTATAACTCTCCCTCCTAGGTAGGTTATTCATTTTTATTTTCGTATATCAGTGAAAAGTTTGCTTGTTGTTGAAATAAAATGGTTGTCGGGTTGATGTGGTGAAATTAAGTTTCATGAACTTAATGCCATGTTGGTATGCTTTTCTGTTTTATAGTGCAAGGGATATGTTAAATGTTGCATTGTTTTTCCAATTTTTCTTCAGGTAGTATGAAGCCAATTTTTTGTGGAAACTTCGAGTATGATGCTCGACAGCCTGATCTGGAAAGACTTTTTAGTCGATATGGAAAAGTTGATAGAGTAGATATGAAATCTGGTGAGCTTCTAGCCGTAGAATGCATCTTTATTTTTAAATCCTTTTTTTATCTAATAAACTTATAAGACGTATACTAGAAACACAGAAGAGGGCATTTGTGTTCTTTTCCTGAATTTGTTTTGAAGTAGTGTGTAACTTTTTCACTCGGATCATACAAATTGCCAAAAGGAAAAACAGAAATTGTAATTTGCAGAGTCGCTGATAATATTTAATATATGAAAAATGCTGAACTGAAAAAGTAACTCTATCCACCAAGAAACTGTTGGATTCATTATCGGTAAGACAACCCAGCGGTTGGAAATTCCTCCAAAGCAGTTCTTGTTGCATATGGTGCCTTGCAATACGAATGGGCATCGTCCAGCATATGGAAATCAGAGAAGGCAACATTTGTCGAGTTTTCGGTGGAGGATTCTAAAAAAGTTTTGAGAAAAGAAGAGCGTATATTTTAAATCCTAAAACTCCTTGGCCAGAATTTTCTTTGGTGCAGGATTTCCTTCGCATATTCATAATCTCCTTGGATAAGGATTGGTCTACAGAATTGAGTTTTCCACCTCTGACAGGCTTCCTCTTCTTGTTTCCAAGAAGATCCATGATCCTCAATGGCACTACCACCTTACATTTTCCTCAGACACTTTGCTTTCCATTCCTCGTGACTTTTGCCTGCCTACAATTTCATACGTTGTTTCGAGGTTGAAACATTGTCAACCTTAGCTCCAAGGCTGCGGAATAATGGAGAAGGCACTTTCTATTTGTAGACCTACCATGAGACATCCTGTTTTTCATTGCTCCTTGACACCACTTAGTTCACAATACAAGGTCTGTTGCTAAATTCACTGGTAACTTAGTCTATAGATTTCACGGTGGTTGCAAATATTTCTTTCTTATGGTAAGAACTTTTTGTGGTTTGTTGAATATATGTTCTAGAAAGGTGATGTTGCATTTTGAGGAGTTCATCAGTGGGAAAATTCTCAGTCTTGTAACATTGTTAGTGTCTCATAGATCCACAGTTAGTTATTTAGTTTTGGTTGTTTGATTGGTTTCCAGGGTTTGCTTTTATCTACATGGAGGATGAGAGAGAGGCTGAGGATGCTATCCATGCACTCGATCGGAGAGAATTTGGCCGAAAGGGCCGCAGACTACGTGTTGAGTGGACCAAAGTAACGTACATTGATTTGGCACATTTTCCAACAAAGTCTTTCCTTTCATTGATCATTATTTACCATAGCTTCAACTGTAGTTTGTATTTTGATTGATCATTATTTTTTCTGTAGCAAGAGCGTGGCATTAGAAGACCTAGTGGAGGTGGAGGTGGAAGTGGAAGTGGAGGCGGTTCGAGGAGATCCTCTACTAACACAAGACCTTCAAAAACTTTATTTGTCATTAACTTTGATCCATATCATACAAGGATAAGAGATTTGGAGAGGCACTTCGATCCGTATGGTAAGATATTGAATGTCAGGATTCGAAGGAATTTTGCATTTGTCCAGTATGAACTGCAGGAGGATGCCACTAGAGCATTGGAGGTTACAAACATGAGGTGCGTTTTTCTTCTTTGAATTACATTTTAAGTGAGTAGAAGGTCACTATATTGTTATTGTTATTGTTATGTGCCTTAATTATTATTATTATTATATTGTGTACAGCAAATTGATGGATCGAGTGATTTCTGTGGAATATGCTGTTCGGGATGATGATGAGAAAAGAAATGGATATAGTCCAGATAGGAATCGTGATAGGTCTCCTGATAGAAAACGACGATCCCCAAGTCCTTATAGAAGGGAGCGAGGAAGCCCCGATTATGGCAATGGTATTAGCCGCAGTCCATATAGGAGGCAAAGGGCTAGTCCTGATTATGGAAGTCGCCGTAGTCCGAGTCCTTATCAGAGAGAGAGGGAGAGAGGATCTCCCGATTATAGCCGTGGTCGTAGTCCCAAGCATAGTCCTTATAGGAGGGAGAGAGAGAGATCAAGTGACCATATTAGGGCTCCCAGCCACAGTCCTCCCCATCAGAGGGAAAGACCAAATGATGACCGAATCCCCAACCGAAGTCCTAGTCCCTACAGGAGAGAGAGGGAGAGGGGGAGTCCTATTGGTGGACGTGGCACAAGCTTTAGTCCTCGTGATAGAGAAAGGTTGAACCCGGACAACGGTCATGATCACCAGGAGAATACAGTAGCTGAACCTGGTGAGTGCCCCAGTTATAGTGGCACTCAGAGCCCAAAGCATCGGGGTTATAACAGGTTTGTACTACGAGTTCATTTGATTGTTTTTAGTATTACTATTCTTGATTATTTTTCGAATTTTTTTGTCTTATGCCTGTGTTCGTGTTATGGTTTTGCAGCAGCCGTTCACCACAAGCAGAGGAATGATGAACTAGAAGGTGGGAAGTGATGTTGATGATCTCAATCTGCTTCAGAGTATGTTTAGTTGTATAACCAGCATTAGTGGTAAACACATGTACTTGCAAGGATAAAGTTTTGTGATTTCTTTACATTTGTGCTTCTGCAGTTTGTAGCGATTCTATGGATATGGTGTTACCAGATTTTAGTTAACAATCAAAATACATAGCACTCTGATCTTAGCTAAGAGTGAGTGACTGTTGCTTTTGGCAGTTTAAAAGCACTGTTTTGGGTTATATCATTATCAACAATGCTTCTAAAATCCTGATAGTGCTTTTGATATTTTTAAATGTATTTTTATGCCATC

mRNA sequence

GGTGTACTAAAAATACAAACAATAATAGGAAAAAATAAAATAATCACAAATCATATTTTTTATAAATTAAAATTAAGGATTAAAAAAAAAAGAATTAAGAAAAAAGAGACTACAAGCAACCCAGCGGTTCGCACTTGTCTCTTTCTCTTGCAATTCTCATTTCTCTCCGGCAGCGGCTACTACGACGGCGACGCGGCTTCTCTCGGGTCACGACCAGGTGACGGCGCAACCCACCTCAGATCTACAATACAACCCACCTCCAGCGTTTGATCGCCTACGCAACAACGTATCTCCGCCACACTCGGATCTGCAACGGCCTCACCTCGGGTCGCTGGATCTGGCTACACACACATCTCGACGGGTCCGATCTACGGTGGAAAGTCATTCGGACGACGATCGAGACTCGCGGTAAGTAACTCAGTGTCTCAGTTCTCCTTCGGTTACGATTTCGCAAGATCCAAGTCGGCAGCGACGGTTTCAGGAACTCGAACAATTAGCAATTGAAGCACATTAAGGAGGAACATAGTAGTATGAAGCCAATTTTTTGTGGAAACTTCGAGTATGATGCTCGACAGCCTGATCTGGAAAGACTTTTTAGTCGATATGGAAAAGTTGATAGAGTAGATATGAAATCTGGGTTTGCTTTTATCTACATGGAGGATGAGAGAGAGGCTGAGGATGCTATCCATGCACTCGATCGGAGAGAATTTGGCCGAAAGGGCCGCAGACTACGTGTTGAGTGGACCAAACAAGAGCGTGGCATTAGAAGACCTAGTGGAGGTGGAGGTGGAAGTGGAAGTGGAGGCGGTTCGAGGAGATCCTCTACTAACACAAGACCTTCAAAAACTTTATTTGTCATTAACTTTGATCCATATCATACAAGGATAAGAGATTTGGAGAGGCACTTCGATCCGTATGGTAAGATATTGAATGTCAGGATTCGAAGGAATTTTGCATTTGTCCAGTATGAACTGCAGGAGGATGCCACTAGAGCATTGGAGGTTACAAACATGAGCAAATTGATGGATCGAGTGATTTCTGTGGAATATGCTGTTCGGGATGATGATGAGAAAAGAAATGGATATAGTCCAGATAGGAATCGTGATAGGTCTCCTGATAGAAAACGACGATCCCCAAGTCCTTATAGAAGGGAGCGAGGAAGCCCCGATTATGGCAATGGTATTAGCCGCAGTCCATATAGGAGGCAAAGGGCTAGTCCTGATTATGGAAGTCGCCGTAGTCCGAGTCCTTATCAGAGAGAGAGGGAGAGAGGATCTCCCGATTATAGCCGTGGTCGTAGTCCCAAGCATAGTCCTTATAGGAGGGAGAGAGAGAGATCAAGTGACCATATTAGGGCTCCCAGCCACAGTCCTCCCCATCAGAGGGAAAGACCAAATGATGACCGAATCCCCAACCGAAGTCCTAGTCCCTACAGGAGAGAGAGGGAGAGGGGGAGTCCTATTGGTGGACGTGGCACAAGCTTTAGTCCTCGTGATAGAGAAAGGTTGAACCCGGACAACGGTCATGATCACCAGGAGAATACAGTAGCTGAACCTGGTGAGTGCCCCAGTTATAGTGGCACTCAGAGCCCAAAGCATCGGGGTTATAACAGCAGCCGTTCACCACAAGCAGAGGAATGATGAACTAGAAGGTGGGAAGTGATGTTGATGATCTCAATCTGCTTCAGAGTATGTTTAGTTGTATAACCAGCATTAGTGGTAAACACATGTACTTGCAAGGATAAAGTTTTGTGATTTCTTTACATTTGTGCTTCTGCAGTTTGTAGCGATTCTATGGATATGGTGTTACCAGATTTTAGTTAACAATCAAAATACATAGCACTCTGATCTTAGCTAAGAGTGAGTGACTGTTGCTTTTGGCAGTTTAAAAGCACTGTTTTGGGTTATATCATTATCAACAATGCTTCTAAAATCCTGATAGTGCTTTTGATATTTTTAAATGTATTTTTATGCCATC

Coding sequence (CDS)

ATGAAGCCAATTTTTTGTGGAAACTTCGAGTATGATGCTCGACAGCCTGATCTGGAAAGACTTTTTAGTCGATATGGAAAAGTTGATAGAGTAGATATGAAATCTGGGTTTGCTTTTATCTACATGGAGGATGAGAGAGAGGCTGAGGATGCTATCCATGCACTCGATCGGAGAGAATTTGGCCGAAAGGGCCGCAGACTACGTGTTGAGTGGACCAAACAAGAGCGTGGCATTAGAAGACCTAGTGGAGGTGGAGGTGGAAGTGGAAGTGGAGGCGGTTCGAGGAGATCCTCTACTAACACAAGACCTTCAAAAACTTTATTTGTCATTAACTTTGATCCATATCATACAAGGATAAGAGATTTGGAGAGGCACTTCGATCCGTATGGTAAGATATTGAATGTCAGGATTCGAAGGAATTTTGCATTTGTCCAGTATGAACTGCAGGAGGATGCCACTAGAGCATTGGAGGTTACAAACATGAGCAAATTGATGGATCGAGTGATTTCTGTGGAATATGCTGTTCGGGATGATGATGAGAAAAGAAATGGATATAGTCCAGATAGGAATCGTGATAGGTCTCCTGATAGAAAACGACGATCCCCAAGTCCTTATAGAAGGGAGCGAGGAAGCCCCGATTATGGCAATGGTATTAGCCGCAGTCCATATAGGAGGCAAAGGGCTAGTCCTGATTATGGAAGTCGCCGTAGTCCGAGTCCTTATCAGAGAGAGAGGGAGAGAGGATCTCCCGATTATAGCCGTGGTCGTAGTCCCAAGCATAGTCCTTATAGGAGGGAGAGAGAGAGATCAAGTGACCATATTAGGGCTCCCAGCCACAGTCCTCCCCATCAGAGGGAAAGACCAAATGATGACCGAATCCCCAACCGAAGTCCTAGTCCCTACAGGAGAGAGAGGGAGAGGGGGAGTCCTATTGGTGGACGTGGCACAAGCTTTAGTCCTCGTGATAGAGAAAGGTTGAACCCGGACAACGGTCATGATCACCAGGAGAATACAGTAGCTGAACCTGGTGAGTGCCCCAGTTATAGTGGCACTCAGAGCCCAAAGCATCGGGGTTATAACAGCAGCCGTTCACCACAAGCAGAGGAATGA

Protein sequence

MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTNTRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSPYRRERERGSPIGGRGTSFSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNSSRSPQAEE*

Homology

[Close]

BLAST of CSPI03G04530 vs. ExPASy Swiss-Prot
Match: P92965 (Serine/arginine-rich splicing factor RS40 OS=Arabidopsis thaliana OX=3702 GN=RS40 PE=1 SV=2)

HSP 1 Score: 389.8 bits (1000), Expect = 3.4e-107
Identity = 226/370 (61.08%), Postives = 269/370 (72.70%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDER+AEDAI ALDR EF
Sbjct: 1   MKPVFCGNFEYDAREGDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTNTRPSKTLFVINFDPYHTRIR 120
           GRKGRRLRVEWTK ER        GG   SGGGSRRSS++ RPSKTLFVINFD  +TR R
Sbjct: 61  GRKGRRLRVEWTKSER--------GGDKRSGGGSRRSSSSMRPSKTLFVINFDADNTRTR 120

Query: 121 DLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDE 180
           DLE+HF+PYGKI+NVRIRRNFAF+QYE QEDATRAL+ +N SKLMD+VISVEYAV+DDD 
Sbjct: 121 DLEKHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDKVISVEYAVKDDDA 180

Query: 181 KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISR-SPYRRQRASPDYGSRRSPS 240
           + NG+SP+R RDRSP+R+RRSPSPY+RERGSPDYG G S  + YR++R SPDYG RRSPS
Sbjct: 181 RGNGHSPERRRDRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPS 240

Query: 241 PYQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPS 300
           PY++ R RGSP+Y R R    SP RRER  S       S SP ++RER + +  P +  S
Sbjct: 241 PYKKSR-RGSPEYGRDRRGNDSPRRRERVASPTKY---SRSPNNKRERMSPNHSPFKKES 300

Query: 301 PYRRERERGSPIGGRGTSFSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGY 360
           P     E  SPI         R+R R +P+NG      ++        Y G +SP  +  
Sbjct: 301 PRNGVGEVESPI-------ERRERSRSSPENGQVESPGSIGRRDSDGGYDGAESPMQKS- 350

Query: 361 NSSRSPQAEE 370
            S RSP A+E
Sbjct: 361 RSPRSPPADE 350

[Close]

BLAST of CSPI03G04530 vs. ExPASy Swiss-Prot
Match: P92966 (Serine/arginine-rich splicing factor RS41 OS=Arabidopsis thaliana OX=3702 GN=RS41 PE=1 SV=2)

HSP 1 Score: 383.6 bits (984), Expect = 2.4e-105
Identity = 226/377 (59.95%), Postives = 261/377 (69.23%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDER+AEDAI ALDR E+
Sbjct: 1   MKPVFCGNFEYDARESDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEY 60

Query: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTNTRPSKTLFVINFDPYHTRIR 120
           GR GRRLRVEWTK +R         GG+G  GGSRRSS+  RPSKTLFVINFD  +TR R
Sbjct: 61  GRTGRRLRVEWTKNDR---------GGAGRSGGSRRSSSGLRPSKTLFVINFDAQNTRTR 120

Query: 121 DLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDE 180
           DLERHF+PYGKI+NVRIRRNFAF+QYE QEDATRAL+ TN SKLMD+VISVEYAV+DDD 
Sbjct: 121 DLERHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKLMDKVISVEYAVKDDDS 180

Query: 181 KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYG-SRRSPS 240
           + NGYSP+R RDRSPDR+RRSPSPYRRERGSPDYG G S   ++R+R SPDYG  RRSPS
Sbjct: 181 RGNGYSPERRRDRSPDRRRRSPSPYRRERGSPDYGRGASPVAHKRERTSPDYGRGRRSPS 240

Query: 241 PYQRERERGSPDYSRG-------RSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDR 300
           PY+R R   SPDY R         SP++   R    R     R  S SPP     P + R
Sbjct: 241 PYKRARL--SPDYKRDDRRRERVASPENGAVRNRSPRKG---RGESRSPP-----PYEKR 300

Query: 301 IPNRSPSPYRRERERGSPIGGRGTSFSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQ 360
             +RSP PY + RE  SP          R R + +P+NG       + E      Y G  
Sbjct: 301 RESRSPPPYEKRRESRSPPPYEKRRERSRSRSKSSPENGQVESPGQIMEVEAGRGYDGAD 356

Query: 361 SPKHRGYNSSRSPQAEE 370
           SP     + SRSP AEE
Sbjct: 361 SPIRE--SPSRSPPAEE 356

[Close]

BLAST of CSPI03G04530 vs. ExPASy Swiss-Prot
Match: P92964 (Serine/arginine-rich splicing factor RS31 OS=Arabidopsis thaliana OX=3702 GN=RS31 PE=1 SV=2)

HSP 1 Score: 261.5 bits (667), Expect = 1.4e-68
Identity = 162/303 (53.47%), Postives = 198/303 (65.35%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           M+P+F GNFEY+ RQ DLERLF +YG+VDRVDMKSG+AF+Y EDER+AEDAI  LD   F
Sbjct: 1   MRPVFVGNFEYETRQSDLERLFDKYGRVDRVDMKSGYAFVYFEDERDAEDAIRKLDNFPF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTNTRPSKTLFVINFDPYHTRIR 120
           G + RRL VEW K ERG  RP           G  ++ +N +P+KTLFVINFDP  T+  
Sbjct: 61  GYEKRRLSVEWAKGERG--RPR----------GDAKAPSNLKPTKTLFVINFDPIRTKEH 120

Query: 121 DLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDE 180
           D+E+HF+PYGK+ NVRIRRNF+FVQ+E QEDAT+ALE T  SK++DRV+SVEYA++DDDE
Sbjct: 121 DIEKHFEPYGKVTNVRIRRNFSFVQFETQEDATKALEATQRSKILDRVVSVEYALKDDDE 180

Query: 181 KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSP 240
           +      DRN  RSP   RRS SP  R R SPDYG     SP + +R SPDYG  RSP  
Sbjct: 181 R-----DDRNGGRSP---RRSLSPVYRRRPSPDYGR--RPSPGQGRRPSPDYGRARSP-- 240

Query: 241 YQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSP 300
            + +R +G   Y R RSP +        RSSD+ R  S         P  DR  +RSP P
Sbjct: 241 -EYDRYKGPAAYERRRSPDYG------RRSSDYGRQRS---------PGYDRYRSRSPVP 263

Query: 301 YRR 304
             R
Sbjct: 301 RGR 263

[Close]

BLAST of CSPI03G04530 vs. ExPASy Swiss-Prot
Match: Q9ZPX8 (Serine/arginine-rich splicing factor RS31A OS=Arabidopsis thaliana OX=3702 GN=RS31A PE=1 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 1.7e-61
Identity = 139/259 (53.67%), Postives = 174/259 (67.18%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           M+ ++ GNF+YD R  DLERLFS++G+V RVDMKSG+AF+Y EDER+AEDAI   D   F
Sbjct: 1   MRHVYVGNFDYDTRHSDLERLFSKFGRVKRVDMKSGYAFVYFEDERDAEDAIRRTDNTTF 60

Query: 61  GRKGRRLRVEWTKQERGIR-RPSGGGGGSGSGGGSRRSSTNTRPSKTLFVINFDPYHTRI 120
           G   R+L VEW K  +G R +P  G           ++ +N RP+KTLFVINFDP  TR 
Sbjct: 61  GYGRRKLSVEWAKDFQGERGKPRDG-----------KAVSNQRPTKTLFVINFDPIRTRE 120

Query: 121 RDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDD 180
           RD+ERHF+PYGK+LNVR+RRNFAFVQ+  QEDAT+AL+ T+ SKL+D+V+SVEYA+R+  
Sbjct: 121 RDMERHFEPYGKVLNVRMRRNFAFVQFATQEDATKALDSTHNSKLLDKVVSVEYALREAG 180

Query: 181 EKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPS 240
           E+ + Y+  R R       RR PSP    R SP+Y      +PY R R SPDYG  R  S
Sbjct: 181 EREDRYAGSRRRRSPSPVYRRRPSPDYTRRRSPEYDRYKGPAPYER-RKSPDYG--RRSS 240

Query: 241 PYQRERERGSPDYSRGRSP 259
            Y R R R SP Y R RSP
Sbjct: 241 DYGRARAR-SPGYDRSRSP 244

[Close]

BLAST of CSPI03G04530 vs. ExPASy Swiss-Prot
Match: O22315 (Serine/arginine-rich-splicing factor SR34 OS=Arabidopsis thaliana OX=3702 GN=SR34 PE=1 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.5e-14
Identity = 95/302 (31.46%), Postives = 137/302 (45.36%), Query Frame = 0


Query: 2   KPIFCGNFEYDARQPDLERLFSRYGKVDRVDMK-----SGFAFIYMEDEREAEDAIHALD 61
           + ++ GN   D R+ ++E LFS+YG V ++D+K      G+AF+  +D R+AEDAIH  D
Sbjct: 7   RTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRD 66

Query: 62  RREFGRKGRRLRVEWTKQERGIRRPS--------GGGGGSGSGGGSRRSSTNTRPSKTLF 121
             +F   G RLRVE      G RR S        GGG G G G G   S   +R S+   
Sbjct: 67  GYDF--DGHRLRVELA---HGGRRSSDDTRGSFNGGGRGGGRGRGDGGSRGPSRRSEFRV 126

Query: 122 VINFDPYHTRIRDLERHFDPYGKILNVRIRRN----FAFVQYELQEDATRALEVTNMSKL 181
           ++   P     +DL+ H    G +   ++ R+       V Y   ED   AL+  + ++ 
Sbjct: 127 LVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKLDDTEF 186

Query: 182 MDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSP-Y 241
            +   +    VR+ D +++  SP R R  S  R R       R R         SRSP  
Sbjct: 187 RNAFSNGYVRVREYDSRKDSRSPSRGRSYSKSRSRSRGRSVSRSRSR---SRSRSRSPKA 246

Query: 242 RRQRASPDYGSRRSPSPYQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPH 286
           +  R SP   + RSP P  + R   SP  SR RS    P  ++    S    +P+ SP H
Sbjct: 247 KSSRRSPAKSTSRSPGPRSKSRS-PSPRRSRSRSRSPLPSVQKEGSKSPSKPSPAKSPIH 299

[Close]

BLAST of CSPI03G04530 vs. ExPASy TrEMBL
Match: A0A0A0L7I3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G063660 PE=4 SV=1)

HSP 1 Score: 712.2 bits (1837), Expect = 1.1e-201
Identity = 365/369 (98.92%), Postives = 366/369 (99.19%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTNTRPSKTLFVINFDPYHTRIR 120
           GRKGRRLRVEWTKQERGIRRPSGGGG  GSGGGSRRSSTNTRPSKTLFVINFDPYHTRIR
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPSGGGG--GSGGGSRRSSTNTRPSKTLFVINFDPYHTRIR 120

Query: 121 DLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDE 180
           DLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDE
Sbjct: 121 DLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDE 180

Query: 181 KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSP 240
           KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSP
Sbjct: 181 KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSP 240

Query: 241 YQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSP 300
           YQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSP
Sbjct: 241 YQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSP 300

Query: 301 YRRERERGSPIGGRGTSFSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYN 360
           YRRERERGSPIGGRG S+SPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYN
Sbjct: 301 YRRERERGSPIGGRGRSYSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYN 360

Query: 361 SSRSPQAEE 370
           SSRSPQAEE
Sbjct: 361 SSRSPQAEE 367

[Close]

BLAST of CSPI03G04530 vs. ExPASy TrEMBL
Match: A0A1S3BL99 (serine/arginine-rich splicing factor RS40-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491066 PE=4 SV=1)

HSP 1 Score: 685.6 bits (1768), Expect = 1.1e-193
Identity = 356/370 (96.22%), Postives = 358/370 (96.76%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTNTRPSKTLFVINFDPYHTRIR 120
           GRKGRRLRVEWTKQERGIRRPSGGGG  GSGGGSRRSS+NTRPSKTLFVINFDPYHTRIR
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPSGGGG--GSGGGSRRSSSNTRPSKTLFVINFDPYHTRIR 120

Query: 121 DLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDE 180
           DLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDE
Sbjct: 121 DLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDE 180

Query: 181 KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSP 240
           KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQR SPDYGSRRSPSP
Sbjct: 181 KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRTSPDYGSRRSPSP 240

Query: 241 YQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSP 300
           YQRERERGSPDY RGRSPKHSPYRRERERSSDH RAPS SP HQRERPN DRIPNRSPSP
Sbjct: 241 YQRERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPSRSPLHQRERPNGDRIPNRSPSP 300

Query: 301 YRRERERGSPI-GGRGTSFSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGY 360
           YRRERER SPI  GRGTS+SPRDRER NPDNGHDHQENTVAEPGECPSYSGTQSPKHRGY
Sbjct: 301 YRRERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGY 360

Query: 361 NSSRSPQAEE 370
           NSSRSPQAEE
Sbjct: 361 NSSRSPQAEE 368

[Close]

BLAST of CSPI03G04530 vs. ExPASy TrEMBL
Match: A0A1S3BLX3 (serine/arginine-rich splicing factor RS40-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491066 PE=4 SV=1)

HSP 1 Score: 679.5 bits (1752), Expect = 8.0e-192
Identity = 355/370 (95.95%), Postives = 357/370 (96.49%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTNTRPSKTLFVINFDPYHTRIR 120
           GRKGRRLRVEWTKQERGIRRPSGGGG  GSGGGSRRSS+NTRPSKTLFVINFDPYHTRIR
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPSGGGG--GSGGGSRRSSSNTRPSKTLFVINFDPYHTRIR 120

Query: 121 DLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDE 180
           DLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDE
Sbjct: 121 DLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDE 180

Query: 181 KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSP 240
           KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQR SPDYGSRRSPSP
Sbjct: 181 KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRTSPDYGSRRSPSP 240

Query: 241 YQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSP 300
           YQRERERGSPDY RGRSPKHSPYRRERERSSDH RAPS SP HQRERPN DRIPNRSPSP
Sbjct: 241 YQRERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPSRSPLHQRERPNGDRIPNRSPSP 300

Query: 301 YRRERERGSPI-GGRGTSFSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGY 360
           YRRERER SPI  GRGTS+SPRDRER NPDNGHDHQENTVAEPGECPSYSGTQSPKHRGY
Sbjct: 301 YRRERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGY 360

Query: 361 NSSRSPQAEE 370
           N SRSPQAEE
Sbjct: 361 N-SRSPQAEE 367

[Close]

BLAST of CSPI03G04530 vs. ExPASy TrEMBL
Match: A0A1S4DXA1 (serine/arginine-rich splicing factor RS40-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491067 PE=4 SV=1)

HSP 1 Score: 642.5 bits (1656), Expect = 1.1e-180
Identity = 339/379 (89.45%), Postives = 350/379 (92.35%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDER+AEDAI ALDRREF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRP----SGGGGGSGSGGGSRRSSTNTRPSKTLFVINFDPYH 120
           GRKGRRLRVEWTKQERGIRRP     GGGGG G GGGSRRSSTNTRPSKTLFVINFDPYH
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPGGGGGGGGGGGGGGGGSRRSSTNTRPSKTLFVINFDPYH 120

Query: 121 TRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVR 180
           TR RDLERHFDPYGKIL+VRIRRNFAFVQYELQEDATRALE+TNMSKLMDRVISVEYAVR
Sbjct: 121 TRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVR 180

Query: 181 DDDEKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRR 240
           DDD+KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRR
Sbjct: 181 DDDDKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRR 240

Query: 241 SPSPYQRERERGSPDYSRGRSPKHSPYRRERERSSDHIR-APSHSPPHQRERPNDDRIPN 300
           SPSPYQRERERGSPDY RGRSP HSPYRRERERSSDH+R APS+ P HQRERPNDDR+PN
Sbjct: 241 SPSPYQRERERGSPDYGRGRSPNHSPYRRERERSSDHVRGAPSNRPTHQRERPNDDRVPN 300

Query: 301 RSPSPYRRERERGSPIGGRGTSFSPRDRER-LNPDNGHDH----QENTVAEPGECPSYSG 360
           RSPSPY RERE+GSP  GRGTS+SPRDRER  NPDNGHDH    Q+N V EPGE P+Y  
Sbjct: 301 RSPSPYGREREKGSPTDGRGTSYSPRDRERSSNPDNGHDHGHDQQQNMVPEPGESPNYGD 360

Query: 361 TQSPKHRGYNSSRSPQAEE 370
           TQSPKHRGY SSRSPQAEE
Sbjct: 361 TQSPKHRGY-SSRSPQAEE 378

[Close]

BLAST of CSPI03G04530 vs. ExPASy TrEMBL
Match: A0A5A7VJB8 (Serine/arginine-rich splicing factor RS40-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G002140 PE=4 SV=1)

HSP 1 Score: 642.5 bits (1656), Expect = 1.1e-180
Identity = 339/379 (89.45%), Postives = 350/379 (92.35%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDER+AEDAI ALDRREF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRP----SGGGGGSGSGGGSRRSSTNTRPSKTLFVINFDPYH 120
           GRKGRRLRVEWTKQERGIRRP     GGGGG G GGGSRRSSTNTRPSKTLFVINFDPYH
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPGGGGGGGGGGGGGGGGSRRSSTNTRPSKTLFVINFDPYH 120

Query: 121 TRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVR 180
           TR RDLERHFDPYGKIL+VRIRRNFAFVQYELQEDATRALE+TNMSKLMDRVISVEYAVR
Sbjct: 121 TRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVR 180

Query: 181 DDDEKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRR 240
           DDD+KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRR
Sbjct: 181 DDDDKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRR 240

Query: 241 SPSPYQRERERGSPDYSRGRSPKHSPYRRERERSSDHIR-APSHSPPHQRERPNDDRIPN 300
           SPSPYQRERERGSPDY RGRSP HSPYRRERERSSDH+R APS+ P HQRERPNDDR+PN
Sbjct: 241 SPSPYQRERERGSPDYGRGRSPNHSPYRRERERSSDHVRGAPSNRPTHQRERPNDDRVPN 300

Query: 301 RSPSPYRRERERGSPIGGRGTSFSPRDRER-LNPDNGHDH----QENTVAEPGECPSYSG 360
           RSPSPY RERE+GSP  GRGTS+SPRDRER  NPDNGHDH    Q+N V EPGE P+Y  
Sbjct: 301 RSPSPYGREREKGSPTDGRGTSYSPRDRERSSNPDNGHDHGHDQQQNMVPEPGESPNYGD 360

Query: 361 TQSPKHRGYNSSRSPQAEE 370
           TQSPKHRGY SSRSPQAEE
Sbjct: 361 TQSPKHRGY-SSRSPQAEE 378

[Close]

BLAST of CSPI03G04530 vs. NCBI nr
Match: XP_011650502.1 (serine/arginine-rich splicing factor RS40 isoform X1 [Cucumis sativus])

HSP 1 Score: 712.2 bits (1837), Expect = 2.3e-201
Identity = 365/369 (98.92%), Postives = 366/369 (99.19%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTNTRPSKTLFVINFDPYHTRIR 120
           GRKGRRLRVEWTKQERGIRRPSGGGG  GSGGGSRRSSTNTRPSKTLFVINFDPYHTRIR
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPSGGGG--GSGGGSRRSSTNTRPSKTLFVINFDPYHTRIR 120

Query: 121 DLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDE 180
           DLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDE
Sbjct: 121 DLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDE 180

Query: 181 KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSP 240
           KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSP
Sbjct: 181 KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSP 240

Query: 241 YQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSP 300
           YQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSP
Sbjct: 241 YQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSP 300

Query: 301 YRRERERGSPIGGRGTSFSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYN 360
           YRRERERGSPIGGRG S+SPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYN
Sbjct: 301 YRRERERGSPIGGRGRSYSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYN 360

Query: 361 SSRSPQAEE 370
           SSRSPQAEE
Sbjct: 361 SSRSPQAEE 367

[Close]

BLAST of CSPI03G04530 vs. NCBI nr
Match: KAE8650115.1 (hypothetical protein Csa_009778 [Cucumis sativus])

HSP 1 Score: 712.2 bits (1837), Expect = 2.3e-201
Identity = 365/369 (98.92%), Postives = 366/369 (99.19%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF
Sbjct: 13  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 72

Query: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTNTRPSKTLFVINFDPYHTRIR 120
           GRKGRRLRVEWTKQERGIRRPSGGGG  GSGGGSRRSSTNTRPSKTLFVINFDPYHTRIR
Sbjct: 73  GRKGRRLRVEWTKQERGIRRPSGGGG--GSGGGSRRSSTNTRPSKTLFVINFDPYHTRIR 132

Query: 121 DLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDE 180
           DLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDE
Sbjct: 133 DLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDE 192

Query: 181 KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSP 240
           KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSP
Sbjct: 193 KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSP 252

Query: 241 YQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSP 300
           YQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSP
Sbjct: 253 YQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSP 312

Query: 301 YRRERERGSPIGGRGTSFSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYN 360
           YRRERERGSPIGGRG S+SPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYN
Sbjct: 313 YRRERERGSPIGGRGRSYSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYN 372

Query: 361 SSRSPQAEE 370
           SSRSPQAEE
Sbjct: 373 SSRSPQAEE 379

[Close]

BLAST of CSPI03G04530 vs. NCBI nr
Match: XP_011650503.1 (serine/arginine-rich splicing factor RS40 isoform X2 [Cucumis sativus])

HSP 1 Score: 706.1 bits (1821), Expect = 1.6e-199
Identity = 364/369 (98.64%), Postives = 365/369 (98.92%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTNTRPSKTLFVINFDPYHTRIR 120
           GRKGRRLRVEWTKQERGIRRPSGGGG  GSGGGSRRSSTNTRPSKTLFVINFDPYHTRIR
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPSGGGG--GSGGGSRRSSTNTRPSKTLFVINFDPYHTRIR 120

Query: 121 DLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDE 180
           DLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDE
Sbjct: 121 DLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDE 180

Query: 181 KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSP 240
           KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSP
Sbjct: 181 KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSP 240

Query: 241 YQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSP 300
           YQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSP
Sbjct: 241 YQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSP 300

Query: 301 YRRERERGSPIGGRGTSFSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYN 360
           YRRERERGSPIGGRG S+SPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYN
Sbjct: 301 YRRERERGSPIGGRGRSYSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYN 360

Query: 361 SSRSPQAEE 370
            SRSPQAEE
Sbjct: 361 -SRSPQAEE 366

[Close]

BLAST of CSPI03G04530 vs. NCBI nr
Match: XP_008449096.1 (PREDICTED: serine/arginine-rich splicing factor RS40-like isoform X1 [Cucumis melo])

HSP 1 Score: 685.6 bits (1768), Expect = 2.3e-193
Identity = 356/370 (96.22%), Postives = 358/370 (96.76%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTNTRPSKTLFVINFDPYHTRIR 120
           GRKGRRLRVEWTKQERGIRRPSGGGG  GSGGGSRRSS+NTRPSKTLFVINFDPYHTRIR
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPSGGGG--GSGGGSRRSSSNTRPSKTLFVINFDPYHTRIR 120

Query: 121 DLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDE 180
           DLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDE
Sbjct: 121 DLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDE 180

Query: 181 KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSP 240
           KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQR SPDYGSRRSPSP
Sbjct: 181 KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRTSPDYGSRRSPSP 240

Query: 241 YQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSP 300
           YQRERERGSPDY RGRSPKHSPYRRERERSSDH RAPS SP HQRERPN DRIPNRSPSP
Sbjct: 241 YQRERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPSRSPLHQRERPNGDRIPNRSPSP 300

Query: 301 YRRERERGSPI-GGRGTSFSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGY 360
           YRRERER SPI  GRGTS+SPRDRER NPDNGHDHQENTVAEPGECPSYSGTQSPKHRGY
Sbjct: 301 YRRERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGY 360

Query: 361 NSSRSPQAEE 370
           NSSRSPQAEE
Sbjct: 361 NSSRSPQAEE 368

[Close]

BLAST of CSPI03G04530 vs. NCBI nr
Match: XP_008449098.1 (PREDICTED: serine/arginine-rich splicing factor RS40-like isoform X2 [Cucumis melo])

HSP 1 Score: 679.5 bits (1752), Expect = 1.6e-191
Identity = 355/370 (95.95%), Postives = 357/370 (96.49%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTNTRPSKTLFVINFDPYHTRIR 120
           GRKGRRLRVEWTKQERGIRRPSGGGG  GSGGGSRRSS+NTRPSKTLFVINFDPYHTRIR
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPSGGGG--GSGGGSRRSSSNTRPSKTLFVINFDPYHTRIR 120

Query: 121 DLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDE 180
           DLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDE
Sbjct: 121 DLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDE 180

Query: 181 KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSP 240
           KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQR SPDYGSRRSPSP
Sbjct: 181 KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRTSPDYGSRRSPSP 240

Query: 241 YQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSP 300
           YQRERERGSPDY RGRSPKHSPYRRERERSSDH RAPS SP HQRERPN DRIPNRSPSP
Sbjct: 241 YQRERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPSRSPLHQRERPNGDRIPNRSPSP 300

Query: 301 YRRERERGSPI-GGRGTSFSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGY 360
           YRRERER SPI  GRGTS+SPRDRER NPDNGHDHQENTVAEPGECPSYSGTQSPKHRGY
Sbjct: 301 YRRERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGY 360

Query: 361 NSSRSPQAEE 370
           N SRSPQAEE
Sbjct: 361 N-SRSPQAEE 367

[Close]

BLAST of CSPI03G04530 vs. TAIR 10
Match: AT4G25500.1 (arginine/serine-rich splicing factor 35 )

HSP 1 Score: 389.8 bits (1000), Expect = 2.4e-108
Identity = 226/370 (61.08%), Postives = 269/370 (72.70%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDER+AEDAI ALDR EF
Sbjct: 1   MKPVFCGNFEYDAREGDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTNTRPSKTLFVINFDPYHTRIR 120
           GRKGRRLRVEWTK ER        GG   SGGGSRRSS++ RPSKTLFVINFD  +TR R
Sbjct: 61  GRKGRRLRVEWTKSER--------GGDKRSGGGSRRSSSSMRPSKTLFVINFDADNTRTR 120

Query: 121 DLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDE 180
           DLE+HF+PYGKI+NVRIRRNFAF+QYE QEDATRAL+ +N SKLMD+VISVEYAV+DDD 
Sbjct: 121 DLEKHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDKVISVEYAVKDDDA 180

Query: 181 KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISR-SPYRRQRASPDYGSRRSPS 240
           + NG+SP+R RDRSP+R+RRSPSPY+RERGSPDYG G S  + YR++R SPDYG RRSPS
Sbjct: 181 RGNGHSPERRRDRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPS 240

Query: 241 PYQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPS 300
           PY++ R RGSP+Y R R    SP RRER  S       S SP ++RER + +  P +  S
Sbjct: 241 PYKKSR-RGSPEYGRDRRGNDSPRRRERVASPTKY---SRSPNNKRERMSPNHSPFKKES 300

Query: 301 PYRRERERGSPIGGRGTSFSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGY 360
           P     E  SPI         R+R R +P+NG      ++        Y G +SP  +  
Sbjct: 301 PRNGVGEVESPI-------ERRERSRSSPENGQVESPGSIGRRDSDGGYDGAESPMQKS- 350

Query: 361 NSSRSPQAEE 370
            S RSP A+E
Sbjct: 361 RSPRSPPADE 350

[Close]

BLAST of CSPI03G04530 vs. TAIR 10
Match: AT4G25500.4 (arginine/serine-rich splicing factor 35 )

HSP 1 Score: 389.8 bits (1000), Expect = 2.4e-108
Identity = 226/370 (61.08%), Postives = 269/370 (72.70%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDER+AEDAI ALDR EF
Sbjct: 1   MKPVFCGNFEYDAREGDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTNTRPSKTLFVINFDPYHTRIR 120
           GRKGRRLRVEWTK ER        GG   SGGGSRRSS++ RPSKTLFVINFD  +TR R
Sbjct: 61  GRKGRRLRVEWTKSER--------GGDKRSGGGSRRSSSSMRPSKTLFVINFDADNTRTR 120

Query: 121 DLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDE 180
           DLE+HF+PYGKI+NVRIRRNFAF+QYE QEDATRAL+ +N SKLMD+VISVEYAV+DDD 
Sbjct: 121 DLEKHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDKVISVEYAVKDDDA 180

Query: 181 KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISR-SPYRRQRASPDYGSRRSPS 240
           + NG+SP+R RDRSP+R+RRSPSPY+RERGSPDYG G S  + YR++R SPDYG RRSPS
Sbjct: 181 RGNGHSPERRRDRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPS 240

Query: 241 PYQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPS 300
           PY++ R RGSP+Y R R    SP RRER  S       S SP ++RER + +  P +  S
Sbjct: 241 PYKKSR-RGSPEYGRDRRGNDSPRRRERVASPTKY---SRSPNNKRERMSPNHSPFKKES 300

Query: 301 PYRRERERGSPIGGRGTSFSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGY 360
           P     E  SPI         R+R R +P+NG      ++        Y G +SP  +  
Sbjct: 301 PRNGVGEVESPI-------ERRERSRSSPENGQVESPGSIGRRDSDGGYDGAESPMQKS- 350

Query: 361 NSSRSPQAEE 370
            S RSP A+E
Sbjct: 361 RSPRSPPADE 350

[Close]

BLAST of CSPI03G04530 vs. TAIR 10
Match: AT5G52040.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 384.4 bits (986), Expect = 1.0e-106
Identity = 227/377 (60.21%), Postives = 262/377 (69.50%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDER+AEDAI ALDR E+
Sbjct: 1   MKPVFCGNFEYDARESDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEY 60

Query: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTNTRPSKTLFVINFDPYHTRIR 120
           GR GRRLRVEWTK +R         GG+G  GGSRRSS+  RPSKTLFVINFD  +TR R
Sbjct: 61  GRTGRRLRVEWTKNDR---------GGAGRSGGSRRSSSGLRPSKTLFVINFDAQNTRTR 120

Query: 121 DLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDE 180
           DLERHF+PYGKI+NVRIRRNFAF+QYE QEDATRAL+ TN SKLMD+VISVEYAV+DDD 
Sbjct: 121 DLERHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKLMDKVISVEYAVKDDDS 180

Query: 181 KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYG-SRRSPS 240
           + NGYSP+R RDRSPDR+RRSPSPYRRERGSPDYG G S   ++R+R SPDYG  RRSPS
Sbjct: 181 RGNGYSPERRRDRSPDRRRRSPSPYRRERGSPDYGRGASPVAHKRERTSPDYGRGRRSPS 240

Query: 241 PYQRERERGSPDYSRG-------RSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDR 300
           PY+R R   SPDY R         SP++   R    R     R  S SPP     P + R
Sbjct: 241 PYKRARL--SPDYKRDDRRRERVASPENGAVRNRSPRKG---RGESRSPP-----PYEKR 300

Query: 301 IPNRSPSPYRRERERGSPIGGRGTSFSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQ 360
             +RSP PY + RE  SP          R R + +P+NG       + E      Y G  
Sbjct: 301 RESRSPPPYEKRRESRSPPPYEKRRERSRSRSKSSPENGQVESPGQIMEVEAGRGYDGAD 357

Query: 361 SPKHRGYNSSRSPQAEE 370
           SP  R  + SRSP AEE
Sbjct: 361 SP-IRESSPSRSPPAEE 357

[Close]

BLAST of CSPI03G04530 vs. TAIR 10
Match: AT5G52040.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 383.6 bits (984), Expect = 1.7e-106
Identity = 226/377 (59.95%), Postives = 261/377 (69.23%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDER+AEDAI ALDR E+
Sbjct: 1   MKPVFCGNFEYDARESDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEY 60

Query: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTNTRPSKTLFVINFDPYHTRIR 120
           GR GRRLRVEWTK +R         GG+G  GGSRRSS+  RPSKTLFVINFD  +TR R
Sbjct: 61  GRTGRRLRVEWTKNDR---------GGAGRSGGSRRSSSGLRPSKTLFVINFDAQNTRTR 120

Query: 121 DLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDE 180
           DLERHF+PYGKI+NVRIRRNFAF+QYE QEDATRAL+ TN SKLMD+VISVEYAV+DDD 
Sbjct: 121 DLERHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKLMDKVISVEYAVKDDDS 180

Query: 181 KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYG-SRRSPS 240
           + NGYSP+R RDRSPDR+RRSPSPYRRERGSPDYG G S   ++R+R SPDYG  RRSPS
Sbjct: 181 RGNGYSPERRRDRSPDRRRRSPSPYRRERGSPDYGRGASPVAHKRERTSPDYGRGRRSPS 240

Query: 241 PYQRERERGSPDYSRG-------RSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDR 300
           PY+R R   SPDY R         SP++   R    R     R  S SPP     P + R
Sbjct: 241 PYKRARL--SPDYKRDDRRRERVASPENGAVRNRSPRKG---RGESRSPP-----PYEKR 300

Query: 301 IPNRSPSPYRRERERGSPIGGRGTSFSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQ 360
             +RSP PY + RE  SP          R R + +P+NG       + E      Y G  
Sbjct: 301 RESRSPPPYEKRRESRSPPPYEKRRERSRSRSKSSPENGQVESPGQIMEVEAGRGYDGAD 356

Query: 361 SPKHRGYNSSRSPQAEE 370
           SP     + SRSP AEE
Sbjct: 361 SPIRE--SPSRSPPAEE 356

[Close]

BLAST of CSPI03G04530 vs. TAIR 10
Match: AT4G25500.3 (arginine/serine-rich splicing factor 35 )

HSP 1 Score: 326.2 bits (835), Expect = 3.3e-89
Identity = 198/335 (59.10%), Postives = 236/335 (70.45%), Query Frame = 0


Query: 36  GFAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSR 95
           GFAF+YMEDER+AEDAI ALDR EFGRKGRRLRVEWTK ER        GG   SGGGSR
Sbjct: 3   GFAFVYMEDERDAEDAIRALDRFEFGRKGRRLRVEWTKSER--------GGDKRSGGGSR 62

Query: 96  RSSTNTRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRA 155
           RSS++ RPSKTLFVINFD  +TR RDLE+HF+PYGKI+NVRIRRNFAF+QYE QEDATRA
Sbjct: 63  RSSSSMRPSKTLFVINFDADNTRTRDLEKHFEPYGKIVNVRIRRNFAFIQYEAQEDATRA 122

Query: 156 LEVTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYG 215
           L+ +N SKLMD+VISVEYAV+DDD + NG+SP+R RDRSP+R+RRSPSPY+RERGSPDYG
Sbjct: 123 LDASNNSKLMDKVISVEYAVKDDDARGNGHSPERRRDRSPERRRRSPSPYKRERGSPDYG 182

Query: 216 NGISR-SPYRRQRASPDYGSRRSPSPYQRERERGSPDYSRGRSPKHSPYRRERERSSDHI 275
            G S  + YR++R SPDYG RRSPSPY++ R RGSP+Y R R    SP RRER  S    
Sbjct: 183 RGASPVAAYRKERTSPDYGRRRSPSPYKKSR-RGSPEYGRDRRGNDSPRRRERVASPTKY 242

Query: 276 RAPSHSPPHQRERPNDDRIPNRSPSPYRRERERGSPIGGRGTSFSPRDRERLNPDNGHDH 335
              S SP ++RER + +  P +  SP     E  SPI         R+R R +P+NG   
Sbjct: 243 ---SRSPNNKRERMSPNHSPFKKESPRNGVGEVESPI-------ERRERSRSSPENGQVE 302

Query: 336 QENTVAEPGECPSYSGTQSPKHRGYNSSRSPQAEE 370
              ++        Y G +SP  +   S RSP A+E
Sbjct: 303 SPGSIGRRDSDGGYDGAESPMQKS-RSPRSPPADE 317

The following BLAST results are available for this feature:

BLAST of CSPI03G04530 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P92965	3.4e-107	61.08	Serine/arginine-rich splicing factor RS40 OS=Arabidopsis thaliana OX=3702 GN=RS4...	[more]
P92966	2.4e-105	59.95	Serine/arginine-rich splicing factor RS41 OS=Arabidopsis thaliana OX=3702 GN=RS4...	[more]
P92964	1.4e-68	53.47	Serine/arginine-rich splicing factor RS31 OS=Arabidopsis thaliana OX=3702 GN=RS3...	[more]
Q9ZPX8	1.7e-61	53.67	Serine/arginine-rich splicing factor RS31A OS=Arabidopsis thaliana OX=3702 GN=RS...	[more]
O22315	1.5e-14	31.46	Serine/arginine-rich-splicing factor SR34 OS=Arabidopsis thaliana OX=3702 GN=SR3...	[more]

BLAST of CSPI03G04530 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7I3	1.1e-201	98.92	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G063660 PE=4 SV=1	[more]
A0A1S3BL99	1.1e-193	96.22	serine/arginine-rich splicing factor RS40-like isoform X1 OS=Cucumis melo OX=365...	[more]
A0A1S3BLX3	8.0e-192	95.95	serine/arginine-rich splicing factor RS40-like isoform X2 OS=Cucumis melo OX=365...	[more]
A0A1S4DXA1	1.1e-180	89.45	serine/arginine-rich splicing factor RS40-like isoform X1 OS=Cucumis melo OX=365...	[more]
A0A5A7VJB8	1.1e-180	89.45	Serine/arginine-rich splicing factor RS40-like isoform X1 OS=Cucumis melo var. m...	[more]

BLAST of CSPI03G04530 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011650502.1	2.3e-201	98.92	serine/arginine-rich splicing factor RS40 isoform X1 [Cucumis sativus]	[more]
KAE8650115.1	2.3e-201	98.92	hypothetical protein Csa_009778 [Cucumis sativus]	[more]
XP_011650503.1	1.6e-199	98.64	serine/arginine-rich splicing factor RS40 isoform X2 [Cucumis sativus]	[more]
XP_008449096.1	2.3e-193	96.22	PREDICTED: serine/arginine-rich splicing factor RS40-like isoform X1 [Cucumis me...	[more]
XP_008449098.1	1.6e-191	95.95	PREDICTED: serine/arginine-rich splicing factor RS40-like isoform X2 [Cucumis me...	[more]

BLAST of CSPI03G04530 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25500.1	2.4e-108	61.08	arginine/serine-rich splicing factor 35	[more]
AT4G25500.4	2.4e-108	61.08	arginine/serine-rich splicing factor 35	[more]
AT5G52040.2	1.0e-106	60.21	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G52040.1	1.7e-106	59.95	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G25500.3	3.3e-89	59.10	arginine/serine-rich splicing factor 35	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 65..131 e-value: 1.6E-15 score: 67.6
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 66..128 e-value: 1.6E-11 score: 43.8
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 64..135 score: 14.896925
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 58..147 e-value: 1.4E-19 score: 72.1
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 1..57 e-value: 7.2E-6 score: 28.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 301..328
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 138..166
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..64
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 197..269
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 277..298
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..64
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 138..328
None	No IPR available	PANTHER	PTHR23147:SF159	BNAC08G47240D PROTEIN	coord: 1..173
None	No IPR available	PANTHER	PTHR23147	SERINE/ARGININE RICH SPLICING FACTOR	coord: 1..173
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 44..140
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 1..57

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G04530.1	CSPI03G04530.1	mRNA
CSPI03G04530.2	CSPI03G04530.2	mRNA
CSPI03G04530.3	CSPI03G04530.3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0016607	nuclear speck
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding