CSPI03G04250 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI03G04250
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr3: 3471822 .. 3472052 (-)
RNA-Seq ExpressionCSPI03G04250
SyntenyCSPI03G04250
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTGGTTCAGCAAAGAAATCAGATGCTAGGATATTCCACCGGAATAAGGAGGACGGGGAGGATGGGGAAGAAGTCGACGATTACGGCGTGTACGTGAGGGCAAAGGTGAGATTTAGAAATGCGAGAGTGGAGAAAGAGAGGAAGAGAGGGGAAACGACAAAAACGACCTTACATTTGAAAAGCAGTGATTTTATACGCCAATCTCAGCCGGAATCCACCGCACCCTAA

mRNA sequence

ATGCTTGGTTCAGCAAAGAAATCAGATGCTAGGATATTCCACCGGAATAAGGAGGACGGGGAGGATGGGGAAGAAGTCGACGATTACGGCGTGTACGTGAGGGCAAAGGTGAGATTTAGAAATGCGAGAGTGGAGAAAGAGAGGAAGAGAGGGGAAACGACAAAAACGACCTTACATTTGAAAAGCAGTGATTTTATACGCCAATCTCAGCCGGAATCCACCGCACCCTAA

Coding sequence (CDS)

ATGCTTGGTTCAGCAAAGAAATCAGATGCTAGGATATTCCACCGGAATAAGGAGGACGGGGAGGATGGGGAAGAAGTCGACGATTACGGCGTGTACGTGAGGGCAAAGGTGAGATTTAGAAATGCGAGAGTGGAGAAAGAGAGGAAGAGAGGGGAAACGACAAAAACGACCTTACATTTGAAAAGCAGTGATTTTATACGCCAATCTCAGCCGGAATCCACCGCACCCTAA

Protein sequence

MLGSAKKSDARIFHRNKEDGEDGEEVDDYGVYVRAKVRFRNARVEKERKRGETTKTTLHLKSSDFIRQSQPESTAP*
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 45..76
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..76
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 8..25

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G04250.1CSPI03G04250.1mRNA