CSPI03G04200 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G04200
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	RPM1-interacting protein 4-like
Location	Chr3: 3429178 .. 3432447 (-)
RNA-Seq Expression	CSPI03G04200
Synteny	CSPI03G04200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAACAAAAATCTCATCTTTTTCTTCTTCTTCTTCTTCTTCTTCTTGTCTCTCTCTCTCTCGCTCTTCTCCTTCTTCTGGTGTGGCCATCCTCTTTCTTCCCTTCTTCGATTCTTCGTTTACTGGCAAAACCAACTTCTCCCTTCTTCCAGCTTTCTCGTATTCATGTCGGTATGTCATTCTTCTTTCTTCATTCCTATTTCTCTATTTCCCCCCCCCCCCCCCTCTCAATTTATCGCGATCCCTTCTTCTTCTTCTTTTTTTTCTTGATTCGATTTGCTTCCTATCCTAATTTTCCCTTCCTCAATTGTTCTTTTTCCTTCTATTTGTTGATTGTTGATTTTCCCATTTCATGATACCCTTTTTCTTTGTTTCCCTTAGATTCACTGTCCTGATTGTTTCTTCCCCCCTTTTTGGAGATTTGCTGATGCTTGTCATTTCTGGATTTTTCTTTCCTTTTTTTTTTTTAAATTTTTTTTTTGTGAATCCCACGTCTTTGATTTATTTGGAATGTTTCCTCTTCACTCTGATCTTATCATCTGGTGGGATTATCCACTGGGACTCACCACTTTTGTTTGTTTGAATTGAGTTTTCATTATATGATTCATGGGGGCAATTTATTTATTTATTTATTTTTATGGAACTGGAACATGATCGACCAAGTATTGTACTTTTGACAGAGTTCTGATAGATAAAGGATGATTTAAATTTAAATCAGTTGTAAACAAATATTGCTAGTTTTTCTTATCTTTTTATATTTCACTTATTTTTCCTATTTCTGATGTCTGCTATCAATCATGGATTATCTTGTTTTTAGGTCATTAATGGAAGAAAGAGGAGTTAGTCCTTCAGTTTTGTACTTTGAAATTCATGATCTATATATTTTAGGAGACCAAAGGTTCAAAAATTGAATCCTTATTTTCATTATTCAGTGTATGACTGCGTTTGATTGACACGACAATGACTTGTAGCGAGGAAGATGGTTTCGTTGGGTTGAATTATAAATTTAGTTTATGTATATTAGCTCTGTTCACTGCTTTGATCTTCTAAAATTTTCTTTTTGGTATGTAACTTTGGACTATGCTTTTGTCTAATCCATGCCATGACATTAGTAATAGATGCTGAATGGGTATGCTATCTAAGCATTCCTGTAATAGTGTTAATTGTTAATGGTTGGAACTTGATAGAGCATAATCAAAGTTTAGACATAATTATTTTAATGTTTAGAATCAGATATGCCTTGAATTCCAAGTATGGGGACTGAATGTGTATTCTAACAGGAGAAGGGTCAGCCATTGCCGAAGTTCGGTGAATGGGATGTTAATAATCCTGCTTCTGCAGAGGGCTTCACCGTGATATTTAATAAGGCAAGAGATGAGAAGAAAACCGGTGGCCAACCTGAATCACCTGGAAAGGCACCTCGGGCTAAAAATGTAGCAGATCCTGGCAAGCCTCAGGCTGTAAGATGCTATGGACATAATTTTTTTCCTTGCCTTGTTTATCATGCTTGATATATAATTCTTCTTGTTCATTGTGATATTTACTGCTCATCTATGCCTATTCCAAATACCATCAGGTTAAAAGGGGTTGGTCATAAATAGAGAGAATTTTGAGAGAATGGATGTTAAGAAAAGGGGGATTGGTTATAAATAAAGAGAATGGATAGAGATGAATGTAAACGATAGTTTAATTTGTTTAGGATGAATTGGAATATTCTTGTGGGATGTTAAAGTGTTGATACAATATTAAATTTACCTTCGCCCATCAACTTAAGCTTTTGGATTAAGCATTCTTTTAAGCTTTTAAGTCTTTTGTATCTTCTCTCGCATTGACATTATTTTCTATAATCACCTTTTGGTGTTTTTGGCTCCAGTCTTTATTTCATTCTATCAGTGAAATGTTTCTATTTAAAAAAATAATAATTACGCTTTTGGGTTAATCAATGATTTAACTTAGTATCATTTATAGCTCTACAATGTTAGTTCCTCCCCAACTTATATTGATGTCTACTTTTAGGGTCTCGTTGCGTCTTATACAAGTCTATAACACCATAAGTGAGGACAGAGTTAAAATTTTAATGCAATATTAAATTTACCTTCTTCCATCAATCTATGCTTTTGGGTCGATTAATGATTTATTAACAAGAGATGGTCTCTGAAAAGTACCTTGAATATTTATAAAGCCATTGTATTTCTCTACCTTTTATATTTCAATATCATTTCAGTTCTTTGGTTTCTCTCAAAATACAAATGTTCCTTCTAAGAGTTATCTGATAACCAACTGCTCCAATTAACTAGACTTCAGTATTTGTCTGTTCTTGAAAATTCATCAGTATCGAAATGCATTCATTTGTCATTGAAATGCAATAGTGCTTTTGGACTTTGGCATTTCTTTATGAGCTGTTACACCTTTCCCTCATGTAGATTTTTTTTCTGCTGTTTTCCAGAAGAAATGGTTCTGCTGCATTCAGAGCCCGCCTACACAATCTTGATGGTATTACCTTTCTGTAGATAACCACCGTATTGTGCTAAGATCGTCATCACTGGTTTTCGATAGAATATGAGATTTTTAAAGCTGTGATCAGCTTGCTATACTATTTGCTTCATAGTCTGAGTCATGGAGGAGAAAAGTAGAAGAATTTTACGTTCTTTATTTGTGGTGCTGATGTGATGAATTAGCTGAGCTATGCCATCCCTGCTCCCTTTTGGTCCCTTTTTTGTTGTCTTTTTAAATGCATTTTGTTCCCTATATCTGATATTGAATCTATATTATTGTTTGTGAAATGTTTTCTTCTCTACTTTTTACATTCATTTTCCTCTGCAGATGATGTGTTGCAACTCCAAGATAACCCTTTATAGAACTCTTAGACACTGTTGTACAACTGTATAGAACAGTGGTTGTTCAAGTAAGCTCGTCCAAAATAATAACCCTTCATAGAAATACATGCCTCAGTTTGGATCTTTGGGTTGCCAATAAGACTACTTTTTTCTAAAGCTTGAAGTATAGTATGTAGGTTAAATCTAAAAATTGAGAGGTTTAAATTGGGTGTGTAAATTGATATCTGATCTTTGATTTAATATTTGCAGAACACAACATTTCTTTGGATAGGCCCAAAGTTGTTTTGTTGGTACCTTTGCCCTCTTGTTCTGTCTAACAATGTCTCTGTAGTTGCTCCCAACAAAAGACTCAAGTTTTCTGGGAACTAAGGAGAGATTGTGAAAATTATACCATGTCTTTGAATTGCTTTATTTTTCCATTGCATATATATATA

mRNA sequence

CAAACAAAAATCTCATCTTTTTCTTCTTCTTCTTCTTCTTCTTCTTGTCTCTCTCTCTCTCGCTCTTCTCCTTCTTCTGGTGTGGCCATCCTCTTTCTTCCCTTCTTCGATTCTTCGTTTACTGGCAAAACCAACTTCTCCCTTCTTCCAGCTTTCTCGTATTCATGTCGGAGAAGGGTCAGCCATTGCCGAAGTTCGGTGAATGGGATGTTAATAATCCTGCTTCTGCAGAGGGCTTCACCGTGATATTTAATAAGGCAAGAGATGAGAAGAAAACCGGTGGCCAACCTGAATCACCTGGAAAGGCACCTCGGGCTAAAAATGTAGCAGATCCTGGCAAGCCTCAGGCTAAGAAATGGTTCTGCTGCATTCAGAGCCCGCCTACACAATCTTGATGGTATTACCTTTCTGTAGATAACCACCGTATTGTGCTAAGATCGTCATCACTGGTTTTCGATAGAATATGAGATTTTTAAAGCTGTGATCAGCTTGCTATACTATTTGCTTCATAGTCTGAGTCATGGAGGAGAAAAGTAGAAGAATTTTACGTTCTTTATTTGTGGTGCTGATGTGATGAATTAGCTGAGCTATGCCATCCCTGCTCCCTTTTGGTCCCTTTTTTGTTGTCTTTTTAAATGCATTTTGTTCCCTATATCTGATATTGAATCTATATTATTGTTTGTGAAATGTTTTCTTCTCTACTTTTTACATTCATTTTCCTCTGCAGATGATGTGTTGCAACTCCAAGATAACCCTTTATAGAACTCTTAGACACTGTTGTACAACTGTATAGAACAGTGGTTGTTCAAGTAAGCTCGTCCAAAATAATAACCCTTCATAGAAATACATGCCTCAGTTTGGATCTTTGGGTTGCCAATAAGACTACTTTTTTCTAAAGCTTGAAGTATAGTATGTAGGTTAAATCTAAAAATTGAGAGGTTTAAATTGGGTGTGTAAATTGATATCTGATCTTTGATTTAATATTTGCAGAACACAACATTTCTTTGGATAGGCCCAAAGTTGTTTTGTTGGTACCTTTGCCCTCTTGTTCTGTCTAACAATGTCTCTGTAGTTGCTCCCAACAAAAGACTCAAGTTTTCTGGGAACTAAGGAGAGATTGTGAAAATTATACCATGTCTTTGAATTGCTTTATTTTTCCATTGCATATATATATA

Coding sequence (CDS)

ATGTCGGAGAAGGGTCAGCCATTGCCGAAGTTCGGTGAATGGGATGTTAATAATCCTGCTTCTGCAGAGGGCTTCACCGTGATATTTAATAAGGCAAGAGATGAGAAGAAAACCGGTGGCCAACCTGAATCACCTGGAAAGGCACCTCGGGCTAAAAATGTAGCAGATCCTGGCAAGCCTCAGGCTAAGAAATGGTTCTGCTGCATTCAGAGCCCGCCTACACAATCTTGA

Protein sequence

MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKAPRAKNVADPGKPQAKKWFCCIQSPPTQS*

Homology

[Close]

BLAST of CSPI03G04200 vs. ExPASy Swiss-Prot
Match: O22633 (Protein NOI4 OS=Arabidopsis thaliana OX=3702 GN=NOI4 PE=1 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 4.0e-26
Identity = 55/79 (69.62%), Postives = 62/79 (78.48%), Query Frame = 0


Query: 1  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKAPRA---KNVADP 60
          MS+KG+PLPKFGEWDVN+PASAEGFTVIFNKARDEKKTGG+P SPGK+          DP
Sbjct: 1  MSDKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGKSSEGHVKSGGGDP 60

Query: 61 GKPQAKKWFCCIQSPPTQS 77
           KPQ KKW CC+Q+P   S
Sbjct: 61 SKPQPKKWLCCMQAPAVDS 79

[Close]

BLAST of CSPI03G04200 vs. ExPASy Swiss-Prot
Match: Q8GYN5 (RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.9e-07
Identity = 26/66 (39.39%), Postives = 39/66 (59.09%), Query Frame = 0


Query: 3   EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKAPRAKNVADPGKPQA 62
           EK   +PKFG+WD NNP+SA+G+T IFNK R+E+ +G       + P  ++  +P    +
Sbjct: 143 EKVTVVPKFGDWDENNPSSADGYTHIFNKVREERSSGANVSGSSRTPTHQSSRNPNNTSS 202

Query: 63  KKWFCC 69
               CC
Sbjct: 203 ----CC 204

[Close]

BLAST of CSPI03G04200 vs. ExPASy TrEMBL
Match: A0A0A0L7F7 (AvrRpt-cleavage domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G047910 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.8e-37
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0


Query: 1  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKAPRAKNVADPGKP 60
          MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKAPRAKNVADPGKP
Sbjct: 1  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKAPRAKNVADPGKP 60

Query: 61 QAKKWFCCIQSPPTQS 77
          QAKKWFCCIQSPPTQS
Sbjct: 61 QAKKWFCCIQSPPTQS 76

[Close]

BLAST of CSPI03G04200 vs. ExPASy TrEMBL
Match: A0A1S3BL66 (RPM1-interacting protein 4-like OS=Cucumis melo OX=3656 GN=LOC103491035 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 5.2e-37
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 0


Query: 1  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKAPRAKNVADPGKP 60
          MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKAP+AKNVADPGKP
Sbjct: 1  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKAPQAKNVADPGKP 60

Query: 61 QAKKWFCCIQSPPTQS 77
          QAKKWFCCIQSPPTQS
Sbjct: 61 QAKKWFCCIQSPPTQS 76

[Close]

BLAST of CSPI03G04200 vs. ExPASy TrEMBL
Match: A0A6J1GG65 (RPM1-interacting protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111453626 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.9e-31
Identity = 66/72 (91.67%), Postives = 68/72 (94.44%), Query Frame = 0


Query: 1  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKAPRAKNVADPGKP 60
          MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKK+GGQPESPG AP+AK  ADP KP
Sbjct: 24 MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKSGGQPESPGNAPKAKPAADPAKP 83

Query: 61 QAKKWFCCIQSP 73
          QAKKWFCCIQSP
Sbjct: 84 QAKKWFCCIQSP 95

[Close]

BLAST of CSPI03G04200 vs. ExPASy TrEMBL
Match: A0A6J1CR09 (RPM1-interacting protein 4-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111013789 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 3.6e-30
Identity = 66/76 (86.84%), Postives = 68/76 (89.47%), Query Frame = 0


Query: 1  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKAPRAKNVADPGKP 60
          MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQ ES  K  + K VAD GKP
Sbjct: 1  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQSESSPKNAQGKRVADSGKP 60

Query: 61 QAKKWFCCIQSPPTQS 77
          Q+KKWFCCIQSPPTQS
Sbjct: 61 QSKKWFCCIQSPPTQS 76

[Close]

BLAST of CSPI03G04200 vs. ExPASy TrEMBL
Match: E9RJK2 (Putative nitrate-induced NOI protein OS=Vicia faba OX=3906 GN=NOI PE=2 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.2e-28
Identity = 62/79 (78.48%), Postives = 70/79 (88.61%), Query Frame = 0


Query: 1  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKA---PRAKNVADP 60
          MSEKG+PLPKFGEWDVN+PASAEGFTVIFNKARDEKKTGG  ESPGK    P++K  +DP
Sbjct: 1  MSEKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGNTESPGKTATEPQSKPASDP 60

Query: 61 GKPQAKKWFCCIQSPPTQS 77
          GKPQ+KKWFCCIQ+PP +S
Sbjct: 61 GKPQSKKWFCCIQNPPAES 79

[Close]

BLAST of CSPI03G04200 vs. NCBI nr
Match: XP_004148258.1 (protein NOI4 [Cucumis sativus] >KGN56031.1 hypothetical protein Csa_009963 [Cucumis sativus])

HSP 1 Score: 164.5 bits (415), Expect = 3.7e-37
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0


Query: 1  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKAPRAKNVADPGKP 60
          MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKAPRAKNVADPGKP
Sbjct: 1  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKAPRAKNVADPGKP 60

Query: 61 QAKKWFCCIQSPPTQS 77
          QAKKWFCCIQSPPTQS
Sbjct: 61 QAKKWFCCIQSPPTQS 76

[Close]

BLAST of CSPI03G04200 vs. NCBI nr
Match: XP_008449047.1 (PREDICTED: RPM1-interacting protein 4-like [Cucumis melo])

HSP 1 Score: 162.9 bits (411), Expect = 1.1e-36
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 0


Query: 1  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKAPRAKNVADPGKP 60
          MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKAP+AKNVADPGKP
Sbjct: 1  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKAPQAKNVADPGKP 60

Query: 61 QAKKWFCCIQSPPTQS 77
          QAKKWFCCIQSPPTQS
Sbjct: 61 QAKKWFCCIQSPPTQS 76

[Close]

BLAST of CSPI03G04200 vs. NCBI nr
Match: XP_038905925.1 (protein NOI4-like [Benincasa hispida])

HSP 1 Score: 150.2 bits (378), Expect = 7.2e-33
Identity = 70/76 (92.11%), Postives = 74/76 (97.37%), Query Frame = 0


Query: 1  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKAPRAKNVADPGKP 60
          MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKAP+AK+ ADPGKP
Sbjct: 1  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKAPQAKHAADPGKP 60

Query: 61 QAKKWFCCIQSPPTQS 77
          QAKKWFCCI+ PPT+S
Sbjct: 61 QAKKWFCCIR-PPTES 75

[Close]

BLAST of CSPI03G04200 vs. NCBI nr
Match: KAG6596757.1 (Protein NOI4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 144.4 bits (363), Expect = 4.0e-31
Identity = 66/72 (91.67%), Postives = 68/72 (94.44%), Query Frame = 0


Query: 1  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKAPRAKNVADPGKP 60
          MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKK+GGQPESPG AP+AK  ADP KP
Sbjct: 1  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKSGGQPESPGNAPKAKPAADPAKP 60

Query: 61 QAKKWFCCIQSP 73
          QAKKWFCCIQSP
Sbjct: 61 QAKKWFCCIQSP 72

[Close]

BLAST of CSPI03G04200 vs. NCBI nr
Match: XP_022950564.1 (RPM1-interacting protein 4-like [Cucurbita moschata])

HSP 1 Score: 144.4 bits (363), Expect = 4.0e-31
Identity = 66/72 (91.67%), Postives = 68/72 (94.44%), Query Frame = 0


Query: 1  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKAPRAKNVADPGKP 60
          MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKK+GGQPESPG AP+AK  ADP KP
Sbjct: 24 MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKSGGQPESPGNAPKAKPAADPAKP 83

Query: 61 QAKKWFCCIQSP 73
          QAKKWFCCIQSP
Sbjct: 84 QAKKWFCCIQSP 95

[Close]

BLAST of CSPI03G04200 vs. TAIR 10
Match: AT5G55850.3 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 114.4 bits (285), Expect = 4.1e-26
Identity = 53/77 (68.83%), Postives = 60/77 (77.92%), Query Frame = 0


Query: 3  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKAPRA---KNVADPGK 62
          +KG+PLPKFGEWDVN+PASAEGFTVIFNKARDEKKTGG+P SPGK+          DP K
Sbjct: 19 DKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGKSSEGHVKSGGGDPSK 78

Query: 63 PQAKKWFCCIQSPPTQS 77
          PQ KKW CC+Q+P   S
Sbjct: 79 PQPKKWLCCMQAPAVDS 95

[Close]

BLAST of CSPI03G04200 vs. TAIR 10
Match: AT2G04410.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 97.8 bits (242), Expect = 4.0e-21
Identity = 46/72 (63.89%), Postives = 58/72 (80.56%), Query Frame = 0


Query: 1  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGK-APRAKNVADPGK 60
          M++KG+PLPKFGEWDVN+P+SAEGFTVIFNKAR+EKK GG+ +SPGK  P      +  +
Sbjct: 1  MADKGRPLPKFGEWDVNDPSSAEGFTVIFNKARNEKKGGGKSDSPGKDEPGYNKNGEVLE 60

Query: 61 PQAKKWFCCIQS 72
            AKKWFCCI++
Sbjct: 61 KPAKKWFCCIRA 72

[Close]

BLAST of CSPI03G04200 vs. TAIR 10
Match: AT5G55850.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 96.7 bits (239), Expect = 8.8e-21
Identity = 48/67 (71.64%), Postives = 53/67 (79.10%), Query Frame = 0


Query: 1  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKAPRA---KNVADP 60
          MS+KG+PLPKFGEWDVN+PASAEGFTVIFNKARDEKKTGG+P SPGK+          DP
Sbjct: 1  MSDKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGKSSEGHVKSGGGDP 60

Query: 61 GKPQAKK 65
           KPQ  K
Sbjct: 61 SKPQPVK 67

[Close]

BLAST of CSPI03G04200 vs. TAIR 10
Match: AT5G55850.2 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 93.2 bits (230), Expect = 9.8e-20
Identity = 46/65 (70.77%), Postives = 51/65 (78.46%), Query Frame = 0


Query: 3  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKAPRA---KNVADPGK 62
          +KG+PLPKFGEWDVN+PASAEGFTVIFNKARDEKKTGG+P SPGK+          DP K
Sbjct: 19 DKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGKSSEGHVKSGGGDPSK 78

Query: 63 PQAKK 65
          PQ  K
Sbjct: 79 PQPVK 83

[Close]

BLAST of CSPI03G04200 vs. TAIR 10
Match: AT5G63270.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 75.9 bits (185), Expect = 1.6e-14
Identity = 44/74 (59.46%), Postives = 48/74 (64.86%), Query Frame = 0


Query: 4  KGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKT----GGQPESPGKAPRAKNVADPG- 63
          KG+PLPKFGEWDVNNPASAEGFTVIF+KA DEKKT    G  P S     R +N      
Sbjct: 5  KGKPLPKFGEWDVNNPASAEGFTVIFSKASDEKKTKKASGAGPNSLVSPQRNQNSDQNNN 64

Query: 64 ----KPQAK-KWFC 68
               P+AK KWFC
Sbjct: 65 HSSQNPKAKNKWFC 78

The following BLAST results are available for this feature:

BLAST of CSPI03G04200 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22633	4.0e-26	69.62	Protein NOI4 OS=Arabidopsis thaliana OX=3702 GN=NOI4 PE=1 SV=1	[more]
Q8GYN5	1.9e-07	39.39	RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1	[more]

BLAST of CSPI03G04200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7F7	1.8e-37	100.00	AvrRpt-cleavage domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G04...	[more]
A0A1S3BL66	5.2e-37	98.68	RPM1-interacting protein 4-like OS=Cucumis melo OX=3656 GN=LOC103491035 PE=4 SV=...	[more]
A0A6J1GG65	1.9e-31	91.67	RPM1-interacting protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111453626 PE...	[more]
A0A6J1CR09	3.6e-30	86.84	RPM1-interacting protein 4-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC...	[more]
E9RJK2	1.2e-28	78.48	Putative nitrate-induced NOI protein OS=Vicia faba OX=3906 GN=NOI PE=2 SV=1	[more]

BLAST of CSPI03G04200 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148258.1	3.7e-37	100.00	protein NOI4 [Cucumis sativus] >KGN56031.1 hypothetical protein Csa_009963 [Cucu...	[more]
XP_008449047.1	1.1e-36	98.68	PREDICTED: RPM1-interacting protein 4-like [Cucumis melo]	[more]
XP_038905925.1	7.2e-33	92.11	protein NOI4-like [Benincasa hispida]	[more]
KAG6596757.1	4.0e-31	91.67	Protein NOI4, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022950564.1	4.0e-31	91.67	RPM1-interacting protein 4-like [Cucurbita moschata]	[more]

BLAST of CSPI03G04200 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G55850.3	4.1e-26	68.83	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT2G04410.1	4.0e-21	63.89	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G55850.1	8.8e-21	71.64	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G55850.2	9.8e-20	70.77	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G63270.1	1.6e-14	59.46	RPM1-interacting protein 4 (RIN4) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008700	RIN4, pathogenic type III effector avirulence factor Avr cleavage site	PFAM	PF05627	AvrRpt-cleavage	coord: 3..38 e-value: 1.1E-23 score: 82.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..63
None	No IPR available	PANTHER	PTHR33159:SF64	RPM1-INTERACTING PROTEIN 4-LIKE	coord: 1..72
IPR040387	RPM1-interacting protein 4/NOI4	PANTHER	PTHR33159	RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN	coord: 1..72

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G04200.1	CSPI03G04200.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005886	plasma membrane