CSPI03G03790 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G03790
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	4-hydroxy-4-methyl-2-oxoglutarate aldolase
Location	Chr3: 3124866 .. 3127364 (-)
RNA-Seq Expression	CSPI03G03790
Synteny	CSPI03G03790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATTTATGCAATGCAACCATTTCGTTTTCCATTGTATGAAAATGGAATGTCATACTGCCACTTCCAATACTCATTTGATTTTTGGGGCTGACACTCAATCCAGCCCATAACAATGGGCTGTTTGATCCTTTCAAAATTGAAGTTTTTTTTTTGCAAAATCAAACGCCAAGCCATTGATTTCTTGAAGCCCAACAACGACGATCATCGCTATCAGGACTCAGGGCACAAGAACCAACGCTATGCTCTATTTGATCACCTTTTCTTGATAAGCTTGACGCCATTTCTAAAATTCTACGCCATGGGGTCGCTTAAATTGACTCACCCTCCTTGTTCGGTTCTACAATTATTGGATGGTTTTGTGCCTTAGCTTTCCACAGAGGAGGTAACCCCTTCTCCCTTTCAATTGGGTGAGTTTCCTTCCTCGTTTTTATCTTCTTTTATTTCTTCTACATGGGAATACTGTTTACATGAGTTTCAAATAGTTCTTAGATGTGTTGAGAACTTTGATAATCCAATTTTTTCTTTGTCCTGCTCTGGAAAACCATCCTTGGAAAATTTGTTACATCTGTGTACTTTGAACACTTGACCTTCCTCAATTGGCTGGGGGTGGTGTCTTTTTATGTCTTTATGCAAAGTTGTTTTTCATGGGGGAAGTATTTTAAACCATCTTCCATTAAATTTGAGAAGATATTGTTAATGTGAACAGAGAGGGAAGATGAAGAAGCTTGTTTGACCTTGACAATTAGAGTTTAAGCCATGATTTTACTTGTACCATCCATTTACATTGATGCAATGATGCTGAGGCATTTTTGTGTTTGTCCATCAAGGGATTAATCACAACTAAGTGCATGTTTGAGAATGACAGTTGAAGTAGTAATTTAAACAAAAAAGAGGTTTAGGTAACACTCATTCTCTAAATTTGGTTTCTATACCTTCGTATTGTTTGGTTTCAAACTCTAAAAAGTGACTTTGAATTATTATGTTTGGTTGATTTTATAGTTATCAAATTACTTAGCGGAGGAAAAAAGATTCTTAATTATAGGGGCAAAGTTAGTATTTCGATGGAAAGTGATTTTGACCTGGGAAAAAGTGATTTAAAATCACGTCCAAACATATCATTATAAAGCCTGGACTTTTGATATGAAACCAACTGAGTTTCTTATCTCTTGTTGATACCAATACCATATCACAACACTATCAAACAACTCCAACTTTTGAGTCATTAAGAGACCAACTTTAGTTTATTAAATAGATTAAATCTTAGTTTGAGTCATCAACTTCCACAGTTATTTTCCGTTGATCCATTAGTTTTCAGATATCATATATATTAGTACCTCAACTTTAAAATGTTTTGTTTAGTCTCTAAACTAGGTGGAGAATAATTTAGTCTATTAACCCGTTTGGATTAACTTTCTAAGTATTTATAAACTTTTTTTTTTTTTTGCACTTTTAAAGACTTGTTTAAACGCATTAGAAAGTCAATCAAAACGGAACACATATCATTAAATTTTTATGTACTAGTCAACAAATGTTAGATTTACATGTAAACTCGCCTAGTTTATATAGTAATAAACGTAAAACAACACGTTTGACGGTTCAAAACCAAAATAGAATGAAGTGTATTATGATTTAGAACATTTGAAAATTCATTCTTCTAACAACAATGACTATTCTCGTCTCCAATCTTCTTTTGTTTGGAGAAGGAAATATAACATTTACATTTTTCTGATCTTTCTGTGAAAGTTACTTCAAAACTATATCTTAACTGATGACATATCCTTGCCAGCAGTGGAAGGCATGGCAGCTCCAGCAACAGCAGATGTTTGTGATGCAAATGCAGCACACGTCACAAACGGAGATCTCCGAGTACTGCAACCGAAATTCGAAATTTACGGGCAACGACGAGCGTTTTCAGGACAGATAGTGACGGTCAAGGTATTTGAAGACAATGTTTTGGTAAGACAGCTTCTTGAAACGAAAGGTGAGGGGAGGGTTCTGGTGATAGATGGAAATGGAAGCAGGAGATGTGCATTATTGGGAGGCAATCTAGGGCAATTGGCTCAAAACAATGGGTGGGCTGGGATTGTTGTAAATGGTTGCATAAGAGATGTTGATGAGATCAATAATTGTGATGTTGGTGTAAGAGCATTAGGGGCTAATCCACTGAAGTCAAACAAGAAAGGGATGGGAGAAAAACATGTGGTTCTTCAAATTGGTGGCACTTTGATTCATGAAGGAGAGTGGTTGTATGCTGATAGTGATGGGATTTTGGTGTCCAAATTTGAGTTGTCTGTTTGAATAGATAGCCTGATTTGAGGAGGAGATCACAGGAAGAAAAAAAACACTTTCTATTGCTTGTTTCTTAGGCTTTGTTATTGAGTTCCTTCCAAGTGTATTGGATTAAGTTATGCTATCTCTTTCATTATACACTTTGTATTTGTGATTCTAAATGAAAGGGTGATTTGAAAGTCTAGTGTTGGATTCTTTGTTTTGGAAGCT

mRNA sequence

CATTTATGCAATGCAACCATTTCGTTTTCCATTGTATGAAAATGGAATGTCATACTGCCACTTCCAATACTCATTTGATTTTTGGGGCTGACACTCAATCCAGCCCATAACAATGGGCTGTTTGATCCTTTCAAAATTGAAGTTTTTTTTTTGCAAAATCAAACGCCAAGCCATTGATTTCTTGAAGCCCAACAACGACGATCATCGCTATCAGGACTCAGGGCACAAGAACCAACGCTATGCTCTATTTGATCACCTTTTCTTGATAAGCTTGACGCCATTTCTAAAATTCTACGCCATGGGGTCGCTTAAATTGACTCACCCTCCTTGTTCGGTTCTACAATTATTGGATGGTTTTGTGCCTTAGCTTTCCACAGAGGAGGTAACCCCTTCTCCCTTTCAATTGGTGGAAGGCATGGCAGCTCCAGCAACAGCAGATGTTTGTGATGCAAATGCAGCACACGTCACAAACGGAGATCTCCGAGTACTGCAACCGAAATTCGAAATTTACGGGCAACGACGAGCGTTTTCAGGACAGATAGTGACGGTCAAGGTATTTGAAGACAATGTTTTGGTAAGACAGCTTCTTGAAACGAAAGGTGAGGGGAGGGTTCTGGTGATAGATGGAAATGGAAGCAGGAGATGTGCATTATTGGGAGGCAATCTAGGGCAATTGGCTCAAAACAATGGGTGGGCTGGGATTGTTGTAAATGGTTGCATAAGAGATGTTGATGAGATCAATAATTGTGATGTTGGTGTAAGAGCATTAGGGGCTAATCCACTGAAGTCAAACAAGAAAGGGATGGGAGAAAAACATGTGGTTCTTCAAATTGGTGGCACTTTGATTCATGAAGGAGAGTGGTTGTATGCTGATAGTGATGGGATTTTGGTGTCCAAATTTGAGTTGTCTGTTTGAATAGATAGCCTGATTTGAGGAGGAGATCACAGGAAGAAAAAAAACACTTTCTATTGCTTGTTTCTTAGGCTTTGTTATTGAGTTCCTTCCAAGTGTATTGGATTAAGTTATGCTATCTCTTTCATTATACACTTTGTATTTGTGATTCTAAATGAAAGGGTGATTTGAAAGTCTAGTGTTGGATTCTTTGTTTTGGAAGCT

Coding sequence (CDS)

ATGGCAGCTCCAGCAACAGCAGATGTTTGTGATGCAAATGCAGCACACGTCACAAACGGAGATCTCCGAGTACTGCAACCGAAATTCGAAATTTACGGGCAACGACGAGCGTTTTCAGGACAGATAGTGACGGTCAAGGTATTTGAAGACAATGTTTTGGTAAGACAGCTTCTTGAAACGAAAGGTGAGGGGAGGGTTCTGGTGATAGATGGAAATGGAAGCAGGAGATGTGCATTATTGGGAGGCAATCTAGGGCAATTGGCTCAAAACAATGGGTGGGCTGGGATTGTTGTAAATGGTTGCATAAGAGATGTTGATGAGATCAATAATTGTGATGTTGGTGTAAGAGCATTAGGGGCTAATCCACTGAAGTCAAACAAGAAAGGGATGGGAGAAAAACATGTGGTTCTTCAAATTGGTGGCACTTTGATTCATGAAGGAGAGTGGTTGTATGCTGATAGTGATGGGATTTTGGTGTCCAAATTTGAGTTGTCTGTTTGA

Protein sequence

MAAPATADVCDANAAHVTNGDLRVLQPKFEIYGQRRAFSGQIVTVKVFEDNVLVRQLLETKGEGRVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCDVGVRALGANPLKSNKKGMGEKHVVLQIGGTLIHEGEWLYADSDGILVSKFELSV*

Homology

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BLAST of CSPI03G03790 vs. ExPASy Swiss-Prot
Match: Q9FH13 (Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 OS=Arabidopsis thaliana OX=3702 GN=At5g56260 PE=1 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 1.8e-71
Identity = 131/166 (78.92%), Postives = 146/166 (87.95%), Query Frame = 0


Query: 1   MAAPATADVCDANAAHVTNGDLRVLQPKFEIYGQRRAFSGQIVTVKVFEDNVLVRQLLET 60
           MAA ATA+ CD+NA  ++NGDLR L P F+IYGQRR FSG IVT+KVFEDNVLVR  LET
Sbjct: 1   MAAFATAEACDSNAELISNGDLRALHPIFKIYGQRRCFSGPIVTLKVFEDNVLVRNQLET 60

Query: 61  KGEGRVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCDVGVRALGA 120
           KGEG VLVIDG GS RCAL+GGNLGQLAQNNGW+GIVVNGC+RDVDEIN+CDVGVRALG+
Sbjct: 61  KGEGGVLVIDGGGSMRCALVGGNLGQLAQNNGWSGIVVNGCVRDVDEINDCDVGVRALGS 120

Query: 121 NPLKSNKKGMGEKHVVLQIGGTLIHEGEWLYADSDGILVSKFELSV 167
           NPLKS KKG GEK+V + IGGTLI +GEWLYADSDGIL+SK ELSV
Sbjct: 121 NPLKSTKKGHGEKNVPVHIGGTLIRDGEWLYADSDGILISKTELSV 166

[Close]

BLAST of CSPI03G03790 vs. ExPASy Swiss-Prot
Match: Q9FFE0 (Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 OS=Arabidopsis thaliana OX=3702 GN=At5g16450 PE=1 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 2.2e-61
Identity = 112/166 (67.47%), Postives = 136/166 (81.93%), Query Frame = 0


Query: 1   MAAPATADVCDANAAHVTNGDLRVLQPKFEIYGQRRAFSGQIVTVKVFEDNVLVRQLLET 60
           MA   TA+VCDAN   + +G LR LQP F+IYG+R+ FSG +VTVKVFEDN L+RQ +E 
Sbjct: 1   MAFVTTAEVCDANQELIRSGQLRALQPIFQIYGRRQIFSGPVVTVKVFEDNGLIRQFIEE 60

Query: 61  KGEGRVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCDVGVRALGA 120
           KG GRVLV+DG GS+RCA+LGGN    AQNNGWAGIVVNGCIRDVDEIN CD+GVRAL +
Sbjct: 61  KGNGRVLVVDGGGSQRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120

Query: 121 NPLKSNKKGMGEKHVVLQIGGTLIHEGEWLYADSDGILVSKFELSV 167
           +P+K++KKG+GE+ V + I GT I +GEWLYAD+DGILVS+ ELSV
Sbjct: 121 HPIKASKKGLGEQRVPVNIAGTRICDGEWLYADTDGILVSQIELSV 166

[Close]

BLAST of CSPI03G03790 vs. ExPASy Swiss-Prot
Match: Q9M8R9 (Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 1 OS=Arabidopsis thaliana OX=3702 GN=At3g02770 PE=2 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 3.7e-61
Identity = 112/166 (67.47%), Postives = 134/166 (80.72%), Query Frame = 0


Query: 1   MAAPATADVCDANAAHVTNGDLRVLQPKFEIYGQRRAFSGQIVTVKVFEDNVLVRQLLET 60
           MA   TA+VCDAN   + +G LR LQP F+IYG+R+ FSG +VTVKVFEDN L+R  LE 
Sbjct: 1   MAFVTTAEVCDANQEMIRSGQLRALQPVFQIYGRRQIFSGPVVTVKVFEDNGLIRHFLEE 60

Query: 61  KGEGRVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCDVGVRALGA 120
           KG GRVLV+DG GS RCA+LGGN    AQNNGWAGI+VNGCIRDVDEIN CD+GVRAL +
Sbjct: 61  KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIIVNGCIRDVDEINGCDIGVRALAS 120

Query: 121 NPLKSNKKGMGEKHVVLQIGGTLIHEGEWLYADSDGILVSKFELSV 167
           +P+K++KKG+GE+ V L I GT I +GEWLYAD+DGILVS+ ELSV
Sbjct: 121 HPIKASKKGLGEQRVSLNIAGTRICDGEWLYADTDGILVSQIELSV 166

[Close]

BLAST of CSPI03G03790 vs. ExPASy Swiss-Prot
Match: Q46ZV6 (Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) OX=264198 GN=Reut_A1963 PE=3 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 4.6e-51
Identity = 87/159 (54.72%), Postives = 122/159 (76.73%), Query Frame = 0


Query: 6   TADVCDANAAHVTNGDLRVLQPKFEIYGQRRAFSGQIVTVKVFEDNVLVRQLLETKGEGR 65
           T D+CDAN   + +G LRV+ P F  +G+++AF+G   T+K+FEDN LVR+ LE+ G+GR
Sbjct: 5   TTDLCDANEPRLADGTLRVMAPVFRAFGKQQAFAGPAATLKIFEDNSLVREALESPGQGR 64

Query: 66  VLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCDVGVRALGANPLKS 125
           VLV+DG GS RCAL+GGNLG LA+ NGW GI+VNGC+RD  E++ CD+G+RAL A+P KS
Sbjct: 65  VLVVDGGGSLRCALVGGNLGLLAEKNGWVGIIVNGCVRDTGELDVCDIGIRALAAHPQKS 124

Query: 126 NKKGMGEKHVVLQIGGTLIHEGEWLYADSDGILVSKFEL 165
            K+G GE+ V +Q+ G ++  G W+Y D+DG+LVS+ +L
Sbjct: 125 QKRGAGERDVAVQMPGAVVRPGNWIYVDADGVLVSEEKL 163

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BLAST of CSPI03G03790 vs. ExPASy Swiss-Prot
Match: Q13X79 (Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Paraburkholderia xenovorans (strain LB400) OX=266265 GN=Bxeno_A2772 PE=3 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 2.5e-49
Identity = 91/160 (56.88%), Postives = 117/160 (73.12%), Query Frame = 0


Query: 5   ATADVCDANAAHVTNGDLRVLQPKFEIYGQRRAFSGQIVTVKVFEDNVLVRQLLETKGEG 64
           ATAD+CDA+   +  G LRVL+P F ++ +   FSG+ VT+KVFEDN LVR  LE KG G
Sbjct: 4   ATADLCDAHEDQLALGTLRVLEPVFHLFSRAGCFSGEAVTLKVFEDNALVRATLEEKGAG 63

Query: 65  RVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCDVGVRALGANPLK 124
           RVLV+DG GS+RCAL+GGNL Q+AQ NGWAGIV+NGC+RD  E+N  +VG+ AL   P +
Sbjct: 64  RVLVVDGGGSQRCALVGGNLAQIAQQNGWAGIVLNGCVRDTLELNEVNVGIAALATCPRR 123

Query: 125 SNKKGMGEKHVVLQIGGTLIHEGEWLYADSDGILVSKFEL 165
             K G GE+ V +Q+ G L+  GEW+YADSDG+LV+   L
Sbjct: 124 GQKLGTGERGVAVQLPGALVRPGEWIYADSDGVLVASAAL 163

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BLAST of CSPI03G03790 vs. ExPASy TrEMBL
Match: A0A0A0L5X9 (4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cucumis sativus OX=3659 GN=Csa_3G044520 PE=3 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 2.6e-89
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 1   MAAPATADVCDANAAHVTNGDLRVLQPKFEIYGQRRAFSGQIVTVKVFEDNVLVRQLLET 60
           MAAPATADVCDANAAHVTNGDLRVLQPKFEIYGQRRAFSGQIVTVKVFEDNVLVRQLLET
Sbjct: 1   MAAPATADVCDANAAHVTNGDLRVLQPKFEIYGQRRAFSGQIVTVKVFEDNVLVRQLLET 60

Query: 61  KGEGRVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCDVGVRALGA 120
           KGEGRVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCDVGVRALGA
Sbjct: 61  KGEGRVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCDVGVRALGA 120

Query: 121 NPLKSNKKGMGEKHVVLQIGGTLIHEGEWLYADSDGILVSKFELSV 167
           NPLKSNKKGMGEKHVVLQIGGTLIHEGEWLYADSDGILVSKFELSV
Sbjct: 121 NPLKSNKKGMGEKHVVLQIGGTLIHEGEWLYADSDGILVSKFELSV 166

[Close]

BLAST of CSPI03G03790 vs. ExPASy TrEMBL
Match: A0A1S3BKF1 (4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cucumis melo OX=3656 GN=LOC103490998 PE=3 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 6.3e-88
Identity = 162/166 (97.59%), Postives = 164/166 (98.80%), Query Frame = 0


Query: 1   MAAPATADVCDANAAHVTNGDLRVLQPKFEIYGQRRAFSGQIVTVKVFEDNVLVRQLLET 60
           MAAPATADVCDANAAHVTNGDLRVLQPKFEIYGQRRAFSGQIVTVKVFEDNVLVRQLLET
Sbjct: 1   MAAPATADVCDANAAHVTNGDLRVLQPKFEIYGQRRAFSGQIVTVKVFEDNVLVRQLLET 60

Query: 61  KGEGRVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCDVGVRALGA 120
           KGEGRVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCD+GVRALG 
Sbjct: 61  KGEGRVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCDIGVRALGT 120

Query: 121 NPLKSNKKGMGEKHVVLQIGGTLIHEGEWLYADSDGILVSKFELSV 167
           NPLKSNKKGMG+KHVVLQIGGTLIHEGEWLYAD DGILVSKFELSV
Sbjct: 121 NPLKSNKKGMGDKHVVLQIGGTLIHEGEWLYADGDGILVSKFELSV 166

[Close]

BLAST of CSPI03G03790 vs. ExPASy TrEMBL
Match: A0A5D3D743 (4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold443G00240 PE=3 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 6.3e-88
Identity = 162/166 (97.59%), Postives = 164/166 (98.80%), Query Frame = 0


Query: 1   MAAPATADVCDANAAHVTNGDLRVLQPKFEIYGQRRAFSGQIVTVKVFEDNVLVRQLLET 60
           MAAPATADVCDANAAHVTNGDLRVLQPKFEIYGQRRAFSGQIVTVKVFEDNVLVRQLLET
Sbjct: 1   MAAPATADVCDANAAHVTNGDLRVLQPKFEIYGQRRAFSGQIVTVKVFEDNVLVRQLLET 60

Query: 61  KGEGRVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCDVGVRALGA 120
           KGEGRVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCD+GVRALG 
Sbjct: 61  KGEGRVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCDIGVRALGT 120

Query: 121 NPLKSNKKGMGEKHVVLQIGGTLIHEGEWLYADSDGILVSKFELSV 167
           NPLKSNKKGMG+KHVVLQIGGTLIHEGEWLYAD DGILVSKFELSV
Sbjct: 121 NPLKSNKKGMGDKHVVLQIGGTLIHEGEWLYADGDGILVSKFELSV 166

[Close]

BLAST of CSPI03G03790 vs. ExPASy TrEMBL
Match: A0A6J1GE55 (4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cucurbita moschata OX=3662 GN=LOC111453129 PE=3 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 4.4e-81
Identity = 149/166 (89.76%), Postives = 160/166 (96.39%), Query Frame = 0


Query: 1   MAAPATADVCDANAAHVTNGDLRVLQPKFEIYGQRRAFSGQIVTVKVFEDNVLVRQLLET 60
           MAAPATAD+CDANAAHVT+GDLRVLQ KF++YGQRRAFSG IVTVKVFEDNVLVRQLLE+
Sbjct: 1   MAAPATADICDANAAHVTSGDLRVLQQKFKVYGQRRAFSGPIVTVKVFEDNVLVRQLLES 60

Query: 61  KGEGRVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCDVGVRALGA 120
           +GEGRVLVIDGNGSRRCALLGGNLGQ+AQ+ GWAG+VVNGCIRDVDEINNCDVGVRALG 
Sbjct: 61  QGEGRVLVIDGNGSRRCALLGGNLGQVAQSMGWAGVVVNGCIRDVDEINNCDVGVRALGT 120

Query: 121 NPLKSNKKGMGEKHVVLQIGGTLIHEGEWLYADSDGILVSKFELSV 167
           NPLKSNKKG+GEKHV + IGGTLIHEGEWLYADSDGILVSKFELSV
Sbjct: 121 NPLKSNKKGLGEKHVPVHIGGTLIHEGEWLYADSDGILVSKFELSV 166

[Close]

BLAST of CSPI03G03790 vs. ExPASy TrEMBL
Match: A0A6J1CPD0 (4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Momordica charantia OX=3673 GN=LOC111013332 PE=3 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 7.5e-81
Identity = 150/166 (90.36%), Postives = 158/166 (95.18%), Query Frame = 0


Query: 1   MAAPATADVCDANAAHVTNGDLRVLQPKFEIYGQRRAFSGQIVTVKVFEDNVLVRQLLET 60
           MA+PATAD+CDANAAHV +GDLRVLQ  FEIYGQRRAFSG + TVKVFEDNVLVRQLLE+
Sbjct: 1   MASPATADICDANAAHVASGDLRVLQSVFEIYGQRRAFSGPVATVKVFEDNVLVRQLLES 60

Query: 61  KGEGRVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCDVGVRALGA 120
           +GEGRVLV+DGNGSRRCALLGGNLGQLAQN GWAGIVVNGCIRDVDEIN CDVGVRALGA
Sbjct: 61  QGEGRVLVVDGNGSRRCALLGGNLGQLAQNMGWAGIVVNGCIRDVDEINVCDVGVRALGA 120

Query: 121 NPLKSNKKGMGEKHVVLQIGGTLIHEGEWLYADSDGILVSKFELSV 167
           NPLKSNKKGMGEKHV +QIGGTLIHEGEWLYADSDGILVSKFELSV
Sbjct: 121 NPLKSNKKGMGEKHVAVQIGGTLIHEGEWLYADSDGILVSKFELSV 166

[Close]

BLAST of CSPI03G03790 vs. NCBI nr
Match: XP_004148273.1 (putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 [Cucumis sativus] >XP_004148274.1 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 [Cucumis sativus] >XP_011650460.1 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 [Cucumis sativus] >XP_031739443.1 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 [Cucumis sativus] >KGN55987.1 hypothetical protein Csa_009602 [Cucumis sativus])

HSP 1 Score: 337.8 bits (865), Expect = 5.3e-89
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 1   MAAPATADVCDANAAHVTNGDLRVLQPKFEIYGQRRAFSGQIVTVKVFEDNVLVRQLLET 60
           MAAPATADVCDANAAHVTNGDLRVLQPKFEIYGQRRAFSGQIVTVKVFEDNVLVRQLLET
Sbjct: 1   MAAPATADVCDANAAHVTNGDLRVLQPKFEIYGQRRAFSGQIVTVKVFEDNVLVRQLLET 60

Query: 61  KGEGRVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCDVGVRALGA 120
           KGEGRVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCDVGVRALGA
Sbjct: 61  KGEGRVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCDVGVRALGA 120

Query: 121 NPLKSNKKGMGEKHVVLQIGGTLIHEGEWLYADSDGILVSKFELSV 167
           NPLKSNKKGMGEKHVVLQIGGTLIHEGEWLYADSDGILVSKFELSV
Sbjct: 121 NPLKSNKKGMGEKHVVLQIGGTLIHEGEWLYADSDGILVSKFELSV 166

[Close]

BLAST of CSPI03G03790 vs. NCBI nr
Match: XP_008448991.1 (PREDICTED: putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 [Cucumis melo] >XP_008448992.1 PREDICTED: putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 [Cucumis melo] >TYK19391.1 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 [Cucumis melo var. makuwa])

HSP 1 Score: 333.2 bits (853), Expect = 1.3e-87
Identity = 162/166 (97.59%), Postives = 164/166 (98.80%), Query Frame = 0


Query: 1   MAAPATADVCDANAAHVTNGDLRVLQPKFEIYGQRRAFSGQIVTVKVFEDNVLVRQLLET 60
           MAAPATADVCDANAAHVTNGDLRVLQPKFEIYGQRRAFSGQIVTVKVFEDNVLVRQLLET
Sbjct: 1   MAAPATADVCDANAAHVTNGDLRVLQPKFEIYGQRRAFSGQIVTVKVFEDNVLVRQLLET 60

Query: 61  KGEGRVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCDVGVRALGA 120
           KGEGRVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCD+GVRALG 
Sbjct: 61  KGEGRVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCDIGVRALGT 120

Query: 121 NPLKSNKKGMGEKHVVLQIGGTLIHEGEWLYADSDGILVSKFELSV 167
           NPLKSNKKGMG+KHVVLQIGGTLIHEGEWLYAD DGILVSKFELSV
Sbjct: 121 NPLKSNKKGMGDKHVVLQIGGTLIHEGEWLYADGDGILVSKFELSV 166

[Close]

BLAST of CSPI03G03790 vs. NCBI nr
Match: XP_038903077.1 (putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 [Benincasa hispida] >XP_038903078.1 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 [Benincasa hispida])

HSP 1 Score: 330.5 bits (846), Expect = 8.5e-87
Identity = 160/166 (96.39%), Postives = 164/166 (98.80%), Query Frame = 0


Query: 1   MAAPATADVCDANAAHVTNGDLRVLQPKFEIYGQRRAFSGQIVTVKVFEDNVLVRQLLET 60
           MAAPATADVCDANAAHVTNGDLRVLQPKF+IYGQRRAFSGQIVTVKVFEDNVLVRQLLET
Sbjct: 1   MAAPATADVCDANAAHVTNGDLRVLQPKFDIYGQRRAFSGQIVTVKVFEDNVLVRQLLET 60

Query: 61  KGEGRVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCDVGVRALGA 120
           KGEGRVLVIDGNGSRRCALLGGNLGQL+ NNGWAGIVVNGCIRDVDEINNCD+GVRALG 
Sbjct: 61  KGEGRVLVIDGNGSRRCALLGGNLGQLSHNNGWAGIVVNGCIRDVDEINNCDIGVRALGT 120

Query: 121 NPLKSNKKGMGEKHVVLQIGGTLIHEGEWLYADSDGILVSKFELSV 167
           NPLKSNKKGMGEKHVVL+IGGTLIHEGEWLYADSDGILVSKFELSV
Sbjct: 121 NPLKSNKKGMGEKHVVLEIGGTLIHEGEWLYADSDGILVSKFELSV 166

[Close]

BLAST of CSPI03G03790 vs. NCBI nr
Match: XP_023540534.1 (putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 [Cucurbita pepo subsp. pepo] >XP_023540535.1 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 [Cucurbita pepo subsp. pepo] >KAG7028314.1 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 310.8 bits (795), Expect = 6.9e-81
Identity = 150/166 (90.36%), Postives = 160/166 (96.39%), Query Frame = 0


Query: 1   MAAPATADVCDANAAHVTNGDLRVLQPKFEIYGQRRAFSGQIVTVKVFEDNVLVRQLLET 60
           MAAPATAD+CDANAAHVT+GDLRVLQ KF+IYGQRRAFSG IVTVKVFEDNVLVRQLLE+
Sbjct: 1   MAAPATADICDANAAHVTSGDLRVLQQKFKIYGQRRAFSGPIVTVKVFEDNVLVRQLLES 60

Query: 61  KGEGRVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCDVGVRALGA 120
           +GEGRVLVIDGNGSRRCALLGGNLGQ+AQ+ GWAG+VVNGCIRDVDEINNCDVGVRALG 
Sbjct: 61  QGEGRVLVIDGNGSRRCALLGGNLGQVAQSMGWAGVVVNGCIRDVDEINNCDVGVRALGT 120

Query: 121 NPLKSNKKGMGEKHVVLQIGGTLIHEGEWLYADSDGILVSKFELSV 167
           NPLKSNKKG+GEKHV + IGGTLIHEGEWLYADSDGILVSKFELSV
Sbjct: 121 NPLKSNKKGLGEKHVPVHIGGTLIHEGEWLYADSDGILVSKFELSV 166

[Close]

BLAST of CSPI03G03790 vs. NCBI nr
Match: KAG6596786.1 (putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 310.8 bits (795), Expect = 6.9e-81
Identity = 150/166 (90.36%), Postives = 160/166 (96.39%), Query Frame = 0


Query: 1   MAAPATADVCDANAAHVTNGDLRVLQPKFEIYGQRRAFSGQIVTVKVFEDNVLVRQLLET 60
           MAAPATAD+CDANAAHVT+GDLRVLQ KF+IYGQRRAFSG IVTVKVFEDNVLVRQLLE+
Sbjct: 14  MAAPATADICDANAAHVTSGDLRVLQQKFKIYGQRRAFSGPIVTVKVFEDNVLVRQLLES 73

Query: 61  KGEGRVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCDVGVRALGA 120
           +GEGRVLVIDGNGSRRCALLGGNLGQ+AQ+ GWAG+VVNGCIRDVDEINNCDVGVRALG 
Sbjct: 74  QGEGRVLVIDGNGSRRCALLGGNLGQVAQSMGWAGVVVNGCIRDVDEINNCDVGVRALGT 133

Query: 121 NPLKSNKKGMGEKHVVLQIGGTLIHEGEWLYADSDGILVSKFELSV 167
           NPLKSNKKG+GEKHV + IGGTLIHEGEWLYADSDGILVSKFELSV
Sbjct: 134 NPLKSNKKGLGEKHVPVHIGGTLIHEGEWLYADSDGILVSKFELSV 179

[Close]

BLAST of CSPI03G03790 vs. TAIR 10
Match: AT5G56260.1 (Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase )

HSP 1 Score: 270.0 bits (689), Expect = 1.3e-72
Identity = 131/166 (78.92%), Postives = 146/166 (87.95%), Query Frame = 0


Query: 1   MAAPATADVCDANAAHVTNGDLRVLQPKFEIYGQRRAFSGQIVTVKVFEDNVLVRQLLET 60
           MAA ATA+ CD+NA  ++NGDLR L P F+IYGQRR FSG IVT+KVFEDNVLVR  LET
Sbjct: 1   MAAFATAEACDSNAELISNGDLRALHPIFKIYGQRRCFSGPIVTLKVFEDNVLVRNQLET 60

Query: 61  KGEGRVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCDVGVRALGA 120
           KGEG VLVIDG GS RCAL+GGNLGQLAQNNGW+GIVVNGC+RDVDEIN+CDVGVRALG+
Sbjct: 61  KGEGGVLVIDGGGSMRCALVGGNLGQLAQNNGWSGIVVNGCVRDVDEINDCDVGVRALGS 120

Query: 121 NPLKSNKKGMGEKHVVLQIGGTLIHEGEWLYADSDGILVSKFELSV 167
           NPLKS KKG GEK+V + IGGTLI +GEWLYADSDGIL+SK ELSV
Sbjct: 121 NPLKSTKKGHGEKNVPVHIGGTLIRDGEWLYADSDGILISKTELSV 166

[Close]

BLAST of CSPI03G03790 vs. TAIR 10
Match: AT5G16450.1 (Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase )

HSP 1 Score: 236.5 bits (602), Expect = 1.6e-62
Identity = 112/166 (67.47%), Postives = 136/166 (81.93%), Query Frame = 0


Query: 1   MAAPATADVCDANAAHVTNGDLRVLQPKFEIYGQRRAFSGQIVTVKVFEDNVLVRQLLET 60
           MA   TA+VCDAN   + +G LR LQP F+IYG+R+ FSG +VTVKVFEDN L+RQ +E 
Sbjct: 1   MAFVTTAEVCDANQELIRSGQLRALQPIFQIYGRRQIFSGPVVTVKVFEDNGLIRQFIEE 60

Query: 61  KGEGRVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCDVGVRALGA 120
           KG GRVLV+DG GS+RCA+LGGN    AQNNGWAGIVVNGCIRDVDEIN CD+GVRAL +
Sbjct: 61  KGNGRVLVVDGGGSQRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120

Query: 121 NPLKSNKKGMGEKHVVLQIGGTLIHEGEWLYADSDGILVSKFELSV 167
           +P+K++KKG+GE+ V + I GT I +GEWLYAD+DGILVS+ ELSV
Sbjct: 121 HPIKASKKGLGEQRVPVNIAGTRICDGEWLYADTDGILVSQIELSV 166

[Close]

BLAST of CSPI03G03790 vs. TAIR 10
Match: AT5G16450.2 (Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase )

HSP 1 Score: 236.5 bits (602), Expect = 1.6e-62
Identity = 112/166 (67.47%), Postives = 136/166 (81.93%), Query Frame = 0


Query: 1   MAAPATADVCDANAAHVTNGDLRVLQPKFEIYGQRRAFSGQIVTVKVFEDNVLVRQLLET 60
           MA   TA+VCDAN   + +G LR LQP F+IYG+R+ FSG +VTVKVFEDN L+RQ +E 
Sbjct: 1   MAFVTTAEVCDANQELIRSGQLRALQPIFQIYGRRQIFSGPVVTVKVFEDNGLIRQFIEE 60

Query: 61  KGEGRVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCDVGVRALGA 120
           KG GRVLV+DG GS+RCA+LGGN    AQNNGWAGIVVNGCIRDVDEIN CD+GVRAL +
Sbjct: 61  KGNGRVLVVDGGGSQRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120

Query: 121 NPLKSNKKGMGEKHVVLQIGGTLIHEGEWLYADSDGILVSKFELSV 167
           +P+K++KKG+GE+ V + I GT I +GEWLYAD+DGILVS+ ELSV
Sbjct: 121 HPIKASKKGLGEQRVPVNIAGTRICDGEWLYADTDGILVSQIELSV 166

[Close]

BLAST of CSPI03G03790 vs. TAIR 10
Match: AT3G02770.1 (Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase )

HSP 1 Score: 235.7 bits (600), Expect = 2.6e-62
Identity = 112/166 (67.47%), Postives = 134/166 (80.72%), Query Frame = 0


Query: 1   MAAPATADVCDANAAHVTNGDLRVLQPKFEIYGQRRAFSGQIVTVKVFEDNVLVRQLLET 60
           MA   TA+VCDAN   + +G LR LQP F+IYG+R+ FSG +VTVKVFEDN L+R  LE 
Sbjct: 1   MAFVTTAEVCDANQEMIRSGQLRALQPVFQIYGRRQIFSGPVVTVKVFEDNGLIRHFLEE 60

Query: 61  KGEGRVLVIDGNGSRRCALLGGNLGQLAQNNGWAGIVVNGCIRDVDEINNCDVGVRALGA 120
           KG GRVLV+DG GS RCA+LGGN    AQNNGWAGI+VNGCIRDVDEIN CD+GVRAL +
Sbjct: 61  KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIIVNGCIRDVDEINGCDIGVRALAS 120

Query: 121 NPLKSNKKGMGEKHVVLQIGGTLIHEGEWLYADSDGILVSKFELSV 167
           +P+K++KKG+GE+ V L I GT I +GEWLYAD+DGILVS+ ELSV
Sbjct: 121 HPIKASKKGLGEQRVSLNIAGTRICDGEWLYADTDGILVSQIELSV 166

The following BLAST results are available for this feature:

BLAST of CSPI03G03790 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FH13	1.8e-71	78.92	Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 OS=Arabidopsis thaliana OX...	[more]
Q9FFE0	2.2e-61	67.47	Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 OS=Arabidopsis thaliana OX...	[more]
Q9M8R9	3.7e-61	67.47	Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 1 OS=Arabidopsis thaliana OX...	[more]
Q46ZV6	4.6e-51	54.72	Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cupriavidus pinatubonensi...	[more]
Q13X79	2.5e-49	56.88	Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Paraburkholderia xenovora...	[more]

BLAST of CSPI03G03790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5X9	2.6e-89	100.00	4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cucumis sativus OX=3659 GN=Csa_3G0...	[more]
A0A1S3BKF1	6.3e-88	97.59	4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cucumis melo OX=3656 GN=LOC1034909...	[more]
A0A5D3D743	6.3e-88	97.59	4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A6J1GE55	4.4e-81	89.76	4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1CPD0	7.5e-81	90.36	4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Momordica charantia OX=3673 GN=LOC...	[more]

BLAST of CSPI03G03790 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148273.1	5.3e-89	100.00	putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 [Cucumis sativus] >XP_0041...	[more]
XP_008448991.1	1.3e-87	97.59	PREDICTED: putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 [Cucumis melo] ...	[more]
XP_038903077.1	8.5e-87	96.39	putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 [Benincasa hispida] >XP_03...	[more]
XP_023540534.1	6.9e-81	90.36	putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 [Cucurbita pepo subsp. pep...	[more]
KAG6596786.1	6.9e-81	90.36	putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3, partial [Cucurbita argyro...	[more]

BLAST of CSPI03G03790 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G56260.1	1.3e-72	78.92	Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase	[more]
AT5G16450.1	1.6e-62	67.47	Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase	[more]
AT5G16450.2	1.6e-62	67.47	Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase	[more]
AT3G02770.1	2.6e-62	67.47	Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010203	Regulator of ribonuclease activity A	TIGRFAM	TIGR01935	TIGR01935	coord: 6..160 e-value: 6.0E-64 score: 212.4
IPR005493	Ribonuclease E inhibitor RraA/RraA-like protein	PFAM	PF03737	RraA-like	coord: 6..159 e-value: 1.0E-45 score: 155.5
IPR005493	Ribonuclease E inhibitor RraA/RraA-like protein	CDD	cd16841	RraA_family	coord: 7..160 e-value: 8.34398E-58 score: 175.726
None	No IPR available	GENE3D	3.50.30.40		coord: 2..166 e-value: 1.2E-50 score: 173.4
None	No IPR available	PANTHER	PTHR33254:SF22	4-HYDROXY-4-METHYL-2-OXOGLUTARATE ALDOLASE	coord: 1..166
None	No IPR available	PANTHER	PTHR33254	4-HYDROXY-4-METHYL-2-OXOGLUTARATE ALDOLASE 3-RELATED	coord: 1..166
IPR036704	Ribonuclease E inhibitor RraA/RraA-like superfamily	SUPERFAMILY	89562	RraA-like	coord: 5..164

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G03790.2	CSPI03G03790.2	mRNA
CSPI03G03790.1	CSPI03G03790.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043086	negative regulation of catalytic activity
biological_process	GO:0051252	regulation of RNA metabolic process
molecular_function	GO:0047443	4-hydroxy-4-methyl-2-oxoglutarate aldolase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0008948	oxaloacetate decarboxylase activity
molecular_function	GO:0008428	ribonuclease inhibitor activity