CSPI03G03730 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G03730
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	C2H2-type domain-containing protein
Location	Chr3: 3067571 .. 3068281 (+)
RNA-Seq Expression	CSPI03G03730
Synteny	CSPI03G03730

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCACAATGGCAATTCACTCCGGATCAAGATCAAGATCAGAAGCACCAATGCTGCTCCCAAGGTGGACGACAACGATTGCAAGAACCAGTTTTCTTCCACTGAAACACCAATGGAGAAAGGCTTATTGTTCCAACCTTCAACTCCGGTCACTGCAGCTGCCACCCGACGAACCTCTCTCTCTCCCATCTTTGGCGTCGTTGATTGTTCTAAATTTTTACACTCTTGGCTTCTCACTGGTCGACGAGGGCGGAAGAGCACCTTCTCTCCTACCTCCTCCACTACCACCACCGATACTGTCGTTAATGTTATCCCTAGTGATCGTCTCAACACAAAAAGAGTGAAGACTGAGACTCATTCTGATTACGAGGAGTCATCGACAATTGGAAAAGTGCACGTTAAAGAAAATAAGAATAATGGGGCTTTGGAGAAGGAATATAAATGTAACATGTGCCGCAAAGTATTCACAAATCCAAAAGCATTGGGAGGACATAAGTCTGGCCATAACAAAGCCAATAAAACAGACGCTGCCATTAAAAAGGAAACTGCAAGTGCTACCATTGGAACGAGCTTTGAACCAAAGCCAACCATGTCGATGGCAGATTCGTCAACTGATCCAACGGATTGGAAGAGACCAGTGCTGGATTTTGATCTCAACAAGCTGCCACCGGAGGAAGCCAGTCTTGAATCTTGCTTTTTGCATCTTTAA

mRNA sequence

ATGGATCACAATGGCAATTCACTCCGGATCAAGATCAAGATCAGAAGCACCAATGCTGCTCCCAAGGTGGACGACAACGATTGCAAGAACCAGTTTTCTTCCACTGAAACACCAATGGAGAAAGGCTTATTGTTCCAACCTTCAACTCCGGTCACTGCAGCTGCCACCCGACGAACCTCTCTCTCTCCCATCTTTGGCGTCGTTGATTGTTCTAAATTTTTACACTCTTGGCTTCTCACTGGTCGACGAGGGCGGAAGAGCACCTTCTCTCCTACCTCCTCCACTACCACCACCGATACTGTCGTTAATGTTATCCCTAGTGATCGTCTCAACACAAAAAGAGTGAAGACTGAGACTCATTCTGATTACGAGGAGTCATCGACAATTGGAAAAGTGCACGTTAAAGAAAATAAGAATAATGGGGCTTTGGAGAAGGAATATAAATGTAACATGTGCCGCAAAGTATTCACAAATCCAAAAGCATTGGGAGGACATAAGTCTGGCCATAACAAAGCCAATAAAACAGACGCTGCCATTAAAAAGGAAACTGCAAGTGCTACCATTGGAACGAGCTTTGAACCAAAGCCAACCATGTCGATGGCAGATTCGTCAACTGATCCAACGGATTGGAAGAGACCAGTGCTGGATTTTGATCTCAACAAGCTGCCACCGGAGGAAGCCAGTCTTGAATCTTGCTTTTTGCATCTTTAA

Coding sequence (CDS)

ATGGATCACAATGGCAATTCACTCCGGATCAAGATCAAGATCAGAAGCACCAATGCTGCTCCCAAGGTGGACGACAACGATTGCAAGAACCAGTTTTCTTCCACTGAAACACCAATGGAGAAAGGCTTATTGTTCCAACCTTCAACTCCGGTCACTGCAGCTGCCACCCGACGAACCTCTCTCTCTCCCATCTTTGGCGTCGTTGATTGTTCTAAATTTTTACACTCTTGGCTTCTCACTGGTCGACGAGGGCGGAAGAGCACCTTCTCTCCTACCTCCTCCACTACCACCACCGATACTGTCGTTAATGTTATCCCTAGTGATCGTCTCAACACAAAAAGAGTGAAGACTGAGACTCATTCTGATTACGAGGAGTCATCGACAATTGGAAAAGTGCACGTTAAAGAAAATAAGAATAATGGGGCTTTGGAGAAGGAATATAAATGTAACATGTGCCGCAAAGTATTCACAAATCCAAAAGCATTGGGAGGACATAAGTCTGGCCATAACAAAGCCAATAAAACAGACGCTGCCATTAAAAAGGAAACTGCAAGTGCTACCATTGGAACGAGCTTTGAACCAAAGCCAACCATGTCGATGGCAGATTCGTCAACTGATCCAACGGATTGGAAGAGACCAGTGCTGGATTTTGATCTCAACAAGCTGCCACCGGAGGAAGCCAGTCTTGAATCTTGCTTTTTGCATCTTTAA

Protein sequence

MDHNGNSLRIKIKIRSTNAAPKVDDNDCKNQFSSTETPMEKGLLFQPSTPVTAAATRRTSLSPIFGVVDCSKFLHSWLLTGRRGRKSTFSPTSSTTTTDTVVNVIPSDRLNTKRVKTETHSDYEESSTIGKVHVKENKNNGALEKEYKCNMCRKVFTNPKALGGHKSGHNKANKTDAAIKKETASATIGTSFEPKPTMSMADSSTDPTDWKRPVLDFDLNKLPPEEASLESCFLHL*

Homology

[Close]

BLAST of CSPI03G03730 vs. ExPASy TrEMBL
Match: A0A0A0L1Z9 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G043960 PE=4 SV=1)

HSP 1 Score: 465.7 bits (1197), Expect = 1.2e-127
Identity = 234/236 (99.15%), Postives = 234/236 (99.15%), Query Frame = 0


Query: 1   MDHNGNSLRIKIKIRSTNAAPKVDDNDCKNQFSSTETPMEKGLLFQPSTPVTAAATRRTS 60
           MDHNGNSLRIKIKIRSTNAAPKVDDNDCKNQFSSTETPMEKGLLFQPSTPVTAAATRRTS
Sbjct: 1   MDHNGNSLRIKIKIRSTNAAPKVDDNDCKNQFSSTETPMEKGLLFQPSTPVTAAATRRTS 60

Query: 61  LSPIFGVVDCSKFLHSWLLTGRRGRKSTFSPTSSTTTTDTVVNVIPSDRLNTKRVKTETH 120
            SPIFGVVDCSKFLHSWLLTGRRGRKSTFSPTSSTTTTDTVVNVIPSDRLN KRVKTETH
Sbjct: 61  PSPIFGVVDCSKFLHSWLLTGRRGRKSTFSPTSSTTTTDTVVNVIPSDRLNKKRVKTETH 120

Query: 121 SDYEESSTIGKVHVKENKNNGALEKEYKCNMCRKVFTNPKALGGHKSGHNKANKTDAAIK 180
           SDYEESSTIGKVHVKENKNNGALEKEYKCNMCRKVFTNPKALGGHKSGHNKANKTDAAIK
Sbjct: 121 SDYEESSTIGKVHVKENKNNGALEKEYKCNMCRKVFTNPKALGGHKSGHNKANKTDAAIK 180

Query: 181 KETASATIGTSFEPKPTMSMADSSTDPTDWKRPVLDFDLNKLPPEEASLESCFLHL 237
           KETASATIGTSFEPKPTMSMADSSTDPTDWKRPVLDFDLNKLPPEEASLESCFLHL
Sbjct: 181 KETASATIGTSFEPKPTMSMADSSTDPTDWKRPVLDFDLNKLPPEEASLESCFLHL 236

[Close]

BLAST of CSPI03G03730 vs. ExPASy TrEMBL
Match: A0A5D3D748 (TPRXL protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold443G00310 PE=4 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 4.5e-79
Identity = 174/250 (69.60%), Postives = 194/250 (77.60%), Query Frame = 0


Query: 1   MDHNGNSLRIKIKIRSTNA-APKVD---DNDCKNQFSS-------TETPMEKGLLFQPST 60
           MDHNGNSLRIKIKIR+++  A KVD   DNDCK QF S       +ETPM+KGLLFQ ST
Sbjct: 1   MDHNGNSLRIKIKIRNSDVPAAKVDDCNDNDCKKQFCSIDHMGFDSETPMDKGLLFQAST 60

Query: 61  PVTAAATRRT--SLSPIFGVVDCSKFLHSWLLTGRRGRKSTFS-PTSSTTTTDTVVNVIP 120
           P+  AATR +  S SP   +VDCSKFLHSW LTGRRGRKS  S  TSSTTTTDTVV+VI 
Sbjct: 61  PMIIAATRGSSPSPSPTCDIVDCSKFLHSWPLTGRRGRKSISSATTSSTTTTDTVVDVIS 120

Query: 121 SDRLNTKRVKTETHSDYEESSTIGKVHVKENKNNGALEKEYKCNMCRKVFTNPKALGGHK 180
           SDRLNTKRVKTETHSD+E+S     V  KENKNNG LEK+YKCNMC KVF +PKALGGHK
Sbjct: 121 SDRLNTKRVKTETHSDHEKS-----VRAKENKNNGVLEKKYKCNMCSKVFASPKALGGHK 180

Query: 181 SGHNKANKTDAAIKKETASATIGTSFEPKPTMSMADSSTDPTDWKRPVLDFDLNKLPPEE 237
           SGH KANKT  AIKKE A+ATIGT+ EPK  +S   SSTD TD K  ++DFDLN+LPP+E
Sbjct: 181 SGHYKANKTVIAIKKENANATIGTTIEPKIMVSTVASSTDRTDQKSLMMDFDLNRLPPKE 240

[Close]

BLAST of CSPI03G03730 vs. ExPASy TrEMBL
Match: A0A0A0L4M3 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G043950 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 1.1e-32
Identity = 126/254 (49.61%), Postives = 143/254 (56.30%), Query Frame = 0


Query: 10  IKIKIRSTNAAPKVDDNDCKNQFSS--------TETPMEKGLLFQPSTPVTAAATRRTSL 69
           +KIK R  N    +D ND   Q  S         ET MEKGL  QP T  T  ++  +S 
Sbjct: 1   MKIKFRKRN-VDSMDKNDDNKQLCSIGDHMRFDCETTMEKGLSIQPPTATTTPSSSLSSC 60

Query: 70  -SPIFG---VVDCSKFL-HSWLLTGRRGRKST-FSPTSSTTTTDTVVNVIPSD-RLNT-- 129
            SP      VVDC K L  SW LTGRRGRK T  S TSSTTTTD   +VI SD RL+T  
Sbjct: 61  PSPAASNNIVVDCLKSLPTSWSLTGRRGRKGTSSSTTSSTTTTD---DVIASDQRLHTKS 120

Query: 130 ------------------KRVKTETHSDYEESSTIGKVHVKENKNNGALEKEYKCNMCRK 189
                             KRVK ETHSD+E      KVH  E K NGALEKEYKC++C K
Sbjct: 121 STSTSTSTATTVDDQHKMKRVKIETHSDHERLLK-KKVHSNE-KKNGALEKEYKCDVCSK 180

Query: 190 VFTNPKALGGHKSGHNKANKT-DAAIKKETASATIGTSFEPKPTMSMADSSTDPTDWKRP 227
           VFT  +ALGGHKS H K  KT DA IKKET      T+ EPK      DSSTD T+ KR 
Sbjct: 181 VFTTSRALGGHKSSHYKPKKTNDAPIKKET------TTSEPKIITMSLDSSTDQTNQKR- 240

[Close]

BLAST of CSPI03G03730 vs. ExPASy TrEMBL
Match: A0A1S3BLH2 (LOW QUALITY PROTEIN: uncharacterized protein LOC103491133 OS=Cucumis melo OX=3656 GN=LOC103491133 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 2.7e-15
Identity = 63/123 (51.22%), Postives = 72/123 (58.54%), Query Frame = 0


Query: 79  LTGRRGRKSTFSPTSSTTTTDTVVNVIPSDRLNTKRVKTETHSDYEESSTIGKVHVKENK 138
           L GRRGRK T  P     +T T + VI  D+LN KR K ETHSD++             K
Sbjct: 232 LEGRRGRKRT--PPPLPLSTATTIYVIARDQLNMKRSKIETHSDHKRPL---------KK 291

Query: 139 NNGALEKEYKCNMCRKVFTNPKALGGHKSGHNKANKT-DAAIKKETASATIGTSFEPKPT 198
           N G   KEY C+ C KVFTNP+ALGGHKS H K NKT D  IKKET      T+ EPK T
Sbjct: 292 NGGFGXKEYICDKCSKVFTNPRALGGHKSSHYKLNKTNDTPIKKETT-----TTSEPKIT 338

Query: 199 MSM 201
           MS+
Sbjct: 352 MSL 338

[Close]

BLAST of CSPI03G03730 vs. ExPASy TrEMBL
Match: A0A5D3D759 (TPRXL protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold443G00320 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 7.0e-08
Identity = 48/93 (51.61%), Postives = 55/93 (59.14%), Query Frame = 0


Query: 39  MEKGLLFQPSTPVTAAATR-----RTSLSPIFG--VVDCSKFLHSWLLTGRRGRKSTFSP 98
           MEKGLL QP    TA ATR      +S SP     VVDC KF+ SW L GRRGRK T  P
Sbjct: 1   MEKGLLVQPP---TATATRPPSPLSSSPSPAASNIVVDCLKFVSSWSLRGRRGRKRT--P 60

Query: 99  TSSTTTTDTVVNVIPSDRLNTKRVKTETHSDYE 125
                +T T + VI  D+LN KR K ETHSD++
Sbjct: 61  PPLPLSTATTIYVIARDQLNMKRSKIETHSDHK 88

[Close]

BLAST of CSPI03G03730 vs. NCBI nr
Match: KGN55980.1 (hypothetical protein Csa_011357 [Cucumis sativus])

HSP 1 Score: 465.7 bits (1197), Expect = 2.4e-127
Identity = 234/236 (99.15%), Postives = 234/236 (99.15%), Query Frame = 0


Query: 1   MDHNGNSLRIKIKIRSTNAAPKVDDNDCKNQFSSTETPMEKGLLFQPSTPVTAAATRRTS 60
           MDHNGNSLRIKIKIRSTNAAPKVDDNDCKNQFSSTETPMEKGLLFQPSTPVTAAATRRTS
Sbjct: 1   MDHNGNSLRIKIKIRSTNAAPKVDDNDCKNQFSSTETPMEKGLLFQPSTPVTAAATRRTS 60

Query: 61  LSPIFGVVDCSKFLHSWLLTGRRGRKSTFSPTSSTTTTDTVVNVIPSDRLNTKRVKTETH 120
            SPIFGVVDCSKFLHSWLLTGRRGRKSTFSPTSSTTTTDTVVNVIPSDRLN KRVKTETH
Sbjct: 61  PSPIFGVVDCSKFLHSWLLTGRRGRKSTFSPTSSTTTTDTVVNVIPSDRLNKKRVKTETH 120

Query: 121 SDYEESSTIGKVHVKENKNNGALEKEYKCNMCRKVFTNPKALGGHKSGHNKANKTDAAIK 180
           SDYEESSTIGKVHVKENKNNGALEKEYKCNMCRKVFTNPKALGGHKSGHNKANKTDAAIK
Sbjct: 121 SDYEESSTIGKVHVKENKNNGALEKEYKCNMCRKVFTNPKALGGHKSGHNKANKTDAAIK 180

Query: 181 KETASATIGTSFEPKPTMSMADSSTDPTDWKRPVLDFDLNKLPPEEASLESCFLHL 237
           KETASATIGTSFEPKPTMSMADSSTDPTDWKRPVLDFDLNKLPPEEASLESCFLHL
Sbjct: 181 KETASATIGTSFEPKPTMSMADSSTDPTDWKRPVLDFDLNKLPPEEASLESCFLHL 236

[Close]

BLAST of CSPI03G03730 vs. NCBI nr
Match: TYK19398.1 (TPRXL protein [Cucumis melo var. makuwa])

HSP 1 Score: 304.3 bits (778), Expect = 9.2e-79
Identity = 174/250 (69.60%), Postives = 194/250 (77.60%), Query Frame = 0


Query: 1   MDHNGNSLRIKIKIRSTNA-APKVD---DNDCKNQFSS-------TETPMEKGLLFQPST 60
           MDHNGNSLRIKIKIR+++  A KVD   DNDCK QF S       +ETPM+KGLLFQ ST
Sbjct: 1   MDHNGNSLRIKIKIRNSDVPAAKVDDCNDNDCKKQFCSIDHMGFDSETPMDKGLLFQAST 60

Query: 61  PVTAAATRRT--SLSPIFGVVDCSKFLHSWLLTGRRGRKSTFS-PTSSTTTTDTVVNVIP 120
           P+  AATR +  S SP   +VDCSKFLHSW LTGRRGRKS  S  TSSTTTTDTVV+VI 
Sbjct: 61  PMIIAATRGSSPSPSPTCDIVDCSKFLHSWPLTGRRGRKSISSATTSSTTTTDTVVDVIS 120

Query: 121 SDRLNTKRVKTETHSDYEESSTIGKVHVKENKNNGALEKEYKCNMCRKVFTNPKALGGHK 180
           SDRLNTKRVKTETHSD+E+S     V  KENKNNG LEK+YKCNMC KVF +PKALGGHK
Sbjct: 121 SDRLNTKRVKTETHSDHEKS-----VRAKENKNNGVLEKKYKCNMCSKVFASPKALGGHK 180

Query: 181 SGHNKANKTDAAIKKETASATIGTSFEPKPTMSMADSSTDPTDWKRPVLDFDLNKLPPEE 237
           SGH KANKT  AIKKE A+ATIGT+ EPK  +S   SSTD TD K  ++DFDLN+LPP+E
Sbjct: 181 SGHYKANKTVIAIKKENANATIGTTIEPKIMVSTVASSTDRTDQKSLMMDFDLNRLPPKE 240

[Close]

BLAST of CSPI03G03730 vs. NCBI nr
Match: XP_011652725.1 (putative protein TPRXL [Cucumis sativus])

HSP 1 Score: 148.7 bits (374), Expect = 6.5e-32
Identity = 124/252 (49.21%), Postives = 145/252 (57.54%), Query Frame = 0


Query: 9   RIKIKIRSTNAAPKVDDND--CK---NQFSSTETPMEKGLLFQPSTPVTAAATRRTSL-S 68
           +IK + R+ ++  K DDN   C    +     ET MEKGL  QP T  T  ++  +S  S
Sbjct: 120 QIKFRKRNVDSMDKNDDNKQLCSIGDHMRFDCETTMEKGLSIQPPTATTTPSSSLSSCPS 179

Query: 69  PIFG---VVDCSKFL-HSWLLTGRRGRKST-FSPTSSTTTTDTVVNVIPSD-RLNT---- 128
           P      VVDC K L  SW LTGRRGRK T  S TSSTTTTD   +VI SD RL+T    
Sbjct: 180 PAASNNIVVDCLKSLPTSWSLTGRRGRKGTSSSTTSSTTTTD---DVIASDQRLHTKSST 239

Query: 129 ----------------KRVKTETHSDYEESSTIGKVHVKENKNNGALEKEYKCNMCRKVF 188
                           KRVK ETHSD+E      KVH  E K NGALEKEYKC++C KVF
Sbjct: 240 STSTSTATTVDDQHKMKRVKIETHSDHERLLK-KKVHSNE-KKNGALEKEYKCDVCSKVF 299

Query: 189 TNPKALGGHKSGHNKANKT-DAAIKKETASATIGTSFEPKPTMSMADSSTDPTDWKRPVL 227
           T  +ALGGHKS H K  KT DA IKKET      T+ EPK      DSSTD T+ KR V+
Sbjct: 300 TTSRALGGHKSSHYKPKKTNDAPIKKET------TTSEPKIITMSLDSSTDQTNQKR-VM 359

[Close]

BLAST of CSPI03G03730 vs. NCBI nr
Match: KGN56002.2 (hypothetical protein Csa_011010 [Cucumis sativus])

HSP 1 Score: 105.5 bits (262), Expect = 6.3e-19
Identity = 69/116 (59.48%), Postives = 79/116 (68.10%), Query Frame = 0


Query: 113 KRVKTETHSDYEESSTIGKVHVKENKNNGALEKEYKCNMCRKVFTNPKALGGHKSGHNKA 172
           KRVK ETHSD+E      KVH  E K NGALEKEYKC++C KVFT  +ALGGHKS H K 
Sbjct: 2   KRVKIETHSDHERLLK-KKVHSNE-KKNGALEKEYKCDVCSKVFTTSRALGGHKSSHYKP 61

Query: 173 NKT-DAAIKKETASATIGTSFEPKPTMSMADSSTDPTDWKRPVLDFDLN-KLPPEE 227
            KT DA IKKET      T+ EPK      DSSTD T+ KR V+DFDLN +LPP++
Sbjct: 62  KKTNDAPIKKET------TTSEPKIITMSLDSSTDQTNQKR-VMDFDLNMQLPPDD 108

[Close]

BLAST of CSPI03G03730 vs. NCBI nr
Match: XP_008449183.1 (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103491133 [Cucumis melo])

HSP 1 Score: 92.4 bits (228), Expect = 5.5e-15
Identity = 63/123 (51.22%), Postives = 72/123 (58.54%), Query Frame = 0


Query: 79  LTGRRGRKSTFSPTSSTTTTDTVVNVIPSDRLNTKRVKTETHSDYEESSTIGKVHVKENK 138
           L GRRGRK T  P     +T T + VI  D+LN KR K ETHSD++             K
Sbjct: 232 LEGRRGRKRT--PPPLPLSTATTIYVIARDQLNMKRSKIETHSDHKRPL---------KK 291

Query: 139 NNGALEKEYKCNMCRKVFTNPKALGGHKSGHNKANKT-DAAIKKETASATIGTSFEPKPT 198
           N G   KEY C+ C KVFTNP+ALGGHKS H K NKT D  IKKET      T+ EPK T
Sbjct: 292 NGGFGXKEYICDKCSKVFTNPRALGGHKSSHYKLNKTNDTPIKKETT-----TTSEPKIT 338

Query: 199 MSM 201
           MS+
Sbjct: 352 MSL 338

[Close]

BLAST of CSPI03G03730 vs. TAIR 10
Match: AT5G56200.1 (C2H2 type zinc finger transcription factor family )

HSP 1 Score: 46.2 bits (108), Expect = 4.2e-05
Identity = 30/82 (36.59%), Postives = 45/82 (54.88%), Query Frame = 0


Query: 146 EYKCNMCRKVFTNPKALGGHKSGHNKAN-KTDAAIKKETASATIGTSFEPKPTMSMADSS 205
           ++ CN+C K F+  +ALGGHK  H  A   T A     TA+ T+  +     +  + ++ 
Sbjct: 410 DHVCNICHKSFSTGQALGGHKRCHWTAPVSTVAPTTVPTAAPTVPAT---ASSSQVTETV 469

Query: 206 TDPTDWKRPVLDFDLNKLPPEE 227
            +    KR VL+FDLN+LPP E
Sbjct: 470 QEVKKLKRRVLEFDLNELPPNE 488

The following BLAST results are available for this feature:

BLAST of CSPI03G03730 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI03G03730 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L1Z9	1.2e-127	99.15	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G043960 P...	[more]
A0A5D3D748	4.5e-79	69.60	TPRXL protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold443G00310 ...	[more]
A0A0A0L4M3	1.1e-32	49.61	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G043950 P...	[more]
A0A1S3BLH2	2.7e-15	51.22	LOW QUALITY PROTEIN: uncharacterized protein LOC103491133 OS=Cucumis melo OX=365...	[more]
A0A5D3D759	7.0e-08	51.61	TPRXL protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold443G00320 ...	[more]

BLAST of CSPI03G03730 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN55980.1	2.4e-127	99.15	hypothetical protein Csa_011357 [Cucumis sativus]	[more]
TYK19398.1	9.2e-79	69.60	TPRXL protein [Cucumis melo var. makuwa]	[more]
XP_011652725.1	6.5e-32	49.21	putative protein TPRXL [Cucumis sativus]	[more]
KGN56002.2	6.3e-19	59.48	hypothetical protein Csa_011010 [Cucumis sativus]	[more]
XP_008449183.1	5.5e-15	51.22	PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103491133 [Cucumis me...	[more]

BLAST of CSPI03G03730 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G56200.1	4.2e-05	36.59	C2H2 type zinc finger transcription factor family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 113..200 e-value: 1.4E-5 score: 26.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 184..206
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 163..210
None	No IPR available	PANTHER	PTHR45988:SF18	C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY	coord: 22..227
IPR044653	C2H2-type zinc-finger protein AZF1/2/3-like	PANTHER	PTHR45988	C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED	coord: 22..227
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 149..169
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 147..174 score: 9.868132
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 144..172

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G03730.1	CSPI03G03730.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0008233	peptidase activity