CSPI03G02610 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G02610
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Pentatricopeptide repeat superfamily protein, putative
Location	Chr3: 2001109 .. 2002976 (-)
RNA-Seq Expression	CSPI03G02610
Synteny	CSPI03G02610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTAAGACTCTTATTAGTATCACAAAGAGGGGAAGGGGAAAAAGAGATAATTTTGGCCATGGGAAATTGATTTGCAAAATTATGCAAAGACCCTTCTCTACCAAATTAGTATTAAAGCCACTGCTTCAGAAACCTTCAGCCATAATCTCAATTCACAATGCCTCCAATTTTCAGCCATGTTTCTCAATCGATGACCAAGCTCCATCCACCGCCATCCGAACGGCTCTTGCCGGCGGCGGCCACACCGCCGACTTGGCTCTAGCCGAGGCCTTTCGGGCGCTCAAATGCAACCCAAATGGCTACGCTTTGGTTCAACTGGTTCGAGCCTGCACGAGCCATGCCTTGGATTCCTGTGGCCACCAGCTTCACAGCTACATTCTGCGATCTGGGTTTGCTTCTAACGTCTTCGTGGGCACAGCCATGGTCAATTTCTACATCAAAACTGAGTCCTTTGATAGTGCCCATAAGCTGTTTGATGAAATGCCTCAACCAAGTTTGGTTACTTGGAACTCCTTGATTTCTGGTTATGTTCATTGTGGCCAGTTTCGCAAGGCTTTGTGTTTGTTTATTCAGCTTGATGGGTCTGGAAATCTTGTGGATTCATATTCTTCGTCTATAGCTTTGAGTGCCTCTGGTCATCTGGGTTGGCTGATATTGGGGCAGTCGATTCATTCAAAAGTTGTAAAGCTTGGTTTGGAAGACAGTACGGTTGTTGCTAATTGTTTGATTGACATGTATGGAAAATGTGAGTCTTTTGAAGGGGCAGTTGAAGTGTTTAATGACATGATAGGTAAGGATACAATTTCATGGAATTCAGTTATTGCAGCCAGTGCTAGAAACGGAAGGCTAGAACAGGCGTCGAGATATTTGCAACAAATGCCTCGACCCGACACTATATCATTTAATGAACTGATAAATGGTTATGCTCAATTTGGAGATATTGAATATGCTGTAGAAATTCTATCAAAGATGGATAGTCCAAACTCTTCGTCTTGGAATGCAGTGCTAACAGGATATGTCGATAGGGATGAAACATGGGAAGCTCTGAGTTTCTTCACTAAAATGCACTCGTGCGATGTCCGGATGGATCAATTCACATTTTCAAGCATTTTGAGTGGCGTTGCAGGGCTCTCAGCATTGAAATGGGGTTTGGCAATCCATTGTTGCATTACTAAATGTGGTTTAGATACATCGACTGTTGTTGGCAGCGCCCTAATTAGTATGTACTCGAAATGTGGGCATGTGAACTATGCGGAAATGATATTTCAGTCATTGCCCAAGAAGAACTTGGTATCTTGGAATGCAATGATCTCAGGTTTGGCTCACAATGGCAAAACAATGGAAGTGATCCATCTTTTTGAGAAGCTAAAAAAGACGAAAGATGTCAAACCTGATAACATCACATTTCTCAACATTCTGCTATCATGTTCAGATAATCAGGTTCCATTGGAAGCCACAATGCAGTACTACAAATCAATGGTTGAGGATTATGGTATCAAACCAACTATCGAGCATTGTTGTACTATGGTTAGGCTAATGGGACAGAGAGGGGATGTATATGGAAGCAAGAGGCTAATACATGAATTAGGGTTTGATTCGAGCGGACCAGTTTGGCGAGCACTTCTGGGTGCTTGTGGCGTTTTGAGGGATTTAAAACTAGCAAAGGTAGCAGCAGCAAAAGTAATAGTGTTTGGGGCTGCTGATGATTATGTATATGTTATGATGTCTAACATTTTTGCATCCCATGGAAAATGGAGAGACGTGAAATTAGTTAGGGAGTTGATGAGAAATAAAGGGGTTAGAAAAGAAACTGGATATAGCTGGTTGATTGAGATGGAAAACGAATTTGTTTTATCATACTAGTTCAT

mRNA sequence

CTTAAGACTCTTATTAGTATCACAAAGAGGGGAAGGGGAAAAAGAGATAATTTTGGCCATGGGAAATTGATTTGCAAAATTATGCAAAGACCCTTCTCTACCAAATTAGTATTAAAGCCACTGCTTCAGAAACCTTCAGCCATAATCTCAATTCACAATGCCTCCAATTTTCAGCCATGTTTCTCAATCGATGACCAAGCTCCATCCACCGCCATCCGAACGGCTCTTGCCGGCGGCGGCCACACCGCCGACTTGGCTCTAGCCGAGGCCTTTCGGGCGCTCAAATGCAACCCAAATGGCTACGCTTTGGTTCAACTGGTTCGAGCCTGCACGAGCCATGCCTTGGATTCCTGTGGCCACCAGCTTCACAGCTACATTCTGCGATCTGGGTTTGCTTCTAACGTCTTCGTGGGCACAGCCATGGTCAATTTCTACATCAAAACTGAGTCCTTTGATAGTGCCCATAAGCTGTTTGATGAAATGCCTCAACCAAGTTTGGTTACTTGGAACTCCTTGATTTCTGGTTATGTTCATTGTGGCCAGTTTCGCAAGGCTTTGTGTTTGTTTATTCAGCTTGATGGGTCTGGAAATCTTGTGGATTCATATTCTTCGTCTATAGCTTTGAGTGCCTCTGGTCATCTGGGTTGGCTGATATTGGGGCAGTCGATTCATTCAAAAGTTGTAAAGCTTGGTTTGGAAGACAGTACGGTTGTTGCTAATTGTTTGATTGACATGTATGGAAAATGTGAGTCTTTTGAAGGGGCAGTTGAAGTGTTTAATGACATGATAGGTAAGGATACAATTTCATGGAATTCAGTTATTGCAGCCAGTGCTAGAAACGGAAGGCTAGAACAGGCGTCGAGATATTTGCAACAAATGCCTCGACCCGACACTATATCATTTAATGAACTGATAAATGGTTATGCTCAATTTGGAGATATTGAATATGCTGTAGAAATTCTATCAAAGATGGATAGTCCAAACTCTTCGTCTTGGAATGCAGTGCTAACAGGATATGTCGATAGGGATGAAACATGGGAAGCTCTGAGTTTCTTCACTAAAATGCACTCGTGCGATGTCCGGATGGATCAATTCACATTTTCAAGCATTTTGAGTGGCGTTGCAGGGCTCTCAGCATTGAAATGGGGTTTGGCAATCCATTGTTGCATTACTAAATGTGGTTTAGATACATCGACTGTTGTTGGCAGCGCCCTAATTAGTATGTACTCGAAATGTGGGCATGTGAACTATGCGGAAATGATATTTCAGTCATTGCCCAAGAAGAACTTGGTATCTTGGAATGCAATGATCTCAGGTTTGGCTCACAATGGCAAAACAATGGAAGTGATCCATCTTTTTGAGAAGCTAAAAAAGACGAAAGATGTCAAACCTGATAACATCACATTTCTCAACATTCTGCTATCATGTTCAGATAATCAGGTTCCATTGGAAGCCACAATGCAGTACTACAAATCAATGGTTGAGGATTATGGTATCAAACCAACTATCGAGCATTGTTGTACTATGGTTAGGCTAATGGGACAGAGAGGGGATGTATATGGAAGCAAGAGGCTAATACATGAATTAGGGTTTGATTCGAGCGGACCAGTTTGGCGAGCACTTCTGGGTGCTTGTGGCGTTTTGAGGGATTTAAAACTAGCAAAGGTAGCAGCAGCAAAAGTAATAGTGTTTGGGGCTGCTGATGATTATGTATATGTTATGATGTCTAACATTTTTGCATCCCATGGAAAATGGAGAGACGTGAAATTAGTTAGGGAGTTGATGAGAAATAAAGGGGTTAGAAAAGAAACTGGATATAGCTGGTTGATTGAGATGGAAAACGAATTTGTTTTATCATACTAGTTCAT

Coding sequence (CDS)

ATGCAAAGACCCTTCTCTACCAAATTAGTATTAAAGCCACTGCTTCAGAAACCTTCAGCCATAATCTCAATTCACAATGCCTCCAATTTTCAGCCATGTTTCTCAATCGATGACCAAGCTCCATCCACCGCCATCCGAACGGCTCTTGCCGGCGGCGGCCACACCGCCGACTTGGCTCTAGCCGAGGCCTTTCGGGCGCTCAAATGCAACCCAAATGGCTACGCTTTGGTTCAACTGGTTCGAGCCTGCACGAGCCATGCCTTGGATTCCTGTGGCCACCAGCTTCACAGCTACATTCTGCGATCTGGGTTTGCTTCTAACGTCTTCGTGGGCACAGCCATGGTCAATTTCTACATCAAAACTGAGTCCTTTGATAGTGCCCATAAGCTGTTTGATGAAATGCCTCAACCAAGTTTGGTTACTTGGAACTCCTTGATTTCTGGTTATGTTCATTGTGGCCAGTTTCGCAAGGCTTTGTGTTTGTTTATTCAGCTTGATGGGTCTGGAAATCTTGTGGATTCATATTCTTCGTCTATAGCTTTGAGTGCCTCTGGTCATCTGGGTTGGCTGATATTGGGGCAGTCGATTCATTCAAAAGTTGTAAAGCTTGGTTTGGAAGACAGTACGGTTGTTGCTAATTGTTTGATTGACATGTATGGAAAATGTGAGTCTTTTGAAGGGGCAGTTGAAGTGTTTAATGACATGATAGGTAAGGATACAATTTCATGGAATTCAGTTATTGCAGCCAGTGCTAGAAACGGAAGGCTAGAACAGGCGTCGAGATATTTGCAACAAATGCCTCGACCCGACACTATATCATTTAATGAACTGATAAATGGTTATGCTCAATTTGGAGATATTGAATATGCTGTAGAAATTCTATCAAAGATGGATAGTCCAAACTCTTCGTCTTGGAATGCAGTGCTAACAGGATATGTCGATAGGGATGAAACATGGGAAGCTCTGAGTTTCTTCACTAAAATGCACTCGTGCGATGTCCGGATGGATCAATTCACATTTTCAAGCATTTTGAGTGGCGTTGCAGGGCTCTCAGCATTGAAATGGGGTTTGGCAATCCATTGTTGCATTACTAAATGTGGTTTAGATACATCGACTGTTGTTGGCAGCGCCCTAATTAGTATGTACTCGAAATGTGGGCATGTGAACTATGCGGAAATGATATTTCAGTCATTGCCCAAGAAGAACTTGGTATCTTGGAATGCAATGATCTCAGGTTTGGCTCACAATGGCAAAACAATGGAAGTGATCCATCTTTTTGAGAAGCTAAAAAAGACGAAAGATGTCAAACCTGATAACATCACATTTCTCAACATTCTGCTATCATGTTCAGATAATCAGGTTCCATTGGAAGCCACAATGCAGTACTACAAATCAATGGTTGAGGATTATGGTATCAAACCAACTATCGAGCATTGTTGTACTATGGTTAGGCTAATGGGACAGAGAGGGGATGTATATGGAAGCAAGAGGCTAATACATGAATTAGGGTTTGATTCGAGCGGACCAGTTTGGCGAGCACTTCTGGGTGCTTGTGGCGTTTTGAGGGATTTAAAACTAGCAAAGGTAGCAGCAGCAAAAGTAATAGTGTTTGGGGCTGCTGATGATTATGTATATGTTATGATGTCTAACATTTTTGCATCCCATGGAAAATGGAGAGACGTGAAATTAGTTAGGGAGTTGATGAGAAATAAAGGGGTTAGAAAAGAAACTGGATATAGCTGGTTGATTGAGATGGAAAACGAATTTGTTTTATCATACTAG

Protein sequence

MQRPFSTKLVLKPLLQKPSAIISIHNASNFQPCFSIDDQAPSTAIRTALAGGGHTADLALAEAFRALKCNPNGYALVQLVRACTSHALDSCGHQLHSYILRSGFASNVFVGTAMVNFYIKTESFDSAHKLFDEMPQPSLVTWNSLISGYVHCGQFRKALCLFIQLDGSGNLVDSYSSSIALSASGHLGWLILGQSIHSKVVKLGLEDSTVVANCLIDMYGKCESFEGAVEVFNDMIGKDTISWNSVIAASARNGRLEQASRYLQQMPRPDTISFNELINGYAQFGDIEYAVEILSKMDSPNSSSWNAVLTGYVDRDETWEALSFFTKMHSCDVRMDQFTFSSILSGVAGLSALKWGLAIHCCITKCGLDTSTVVGSALISMYSKCGHVNYAEMIFQSLPKKNLVSWNAMISGLAHNGKTMEVIHLFEKLKKTKDVKPDNITFLNILLSCSDNQVPLEATMQYYKSMVEDYGIKPTIEHCCTMVRLMGQRGDVYGSKRLIHELGFDSSGPVWRALLGACGVLRDLKLAKVAAAKVIVFGAADDYVYVMMSNIFASHGKWRDVKLVRELMRNKGVRKETGYSWLIEMENEFVLSY*

Homology

[Close]

BLAST of CSPI03G02610 vs. ExPASy Swiss-Prot
Match: Q9FGL1 (Putative pentatricopeptide repeat-containing protein At5g47460 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E103 PE=3 SV=1)

HSP 1 Score: 538.1 bits (1385), Expect = 1.2e-151
Identity = 251/515 (48.74%), Postives = 358/515 (69.51%), Query Frame = 0


Query: 71  PNGYALVQLVRACTSHALDSCGHQLHSYILRSGFASNVFVGTAMVNFYIKTESFDSAHKL 130
           P+   LV L+R   ++   S   QLH Y+ + GF SN  +  +++ FY  ++S + AHK+
Sbjct: 53  PDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKV 112

Query: 131 FDEMPQPSLVTWNSLISGYVHCGQFRKALCLFIQLDGSGNLVDSYSSSIALSASGHLGWL 190
           FDEMP P +++WNSL+SGYV  G+F++ +CLF++L  S    + +S + AL+A   L   
Sbjct: 113 FDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLS 172

Query: 191 ILGQSIHSKVVKLGLE-DSTVVANCLIDMYGKCESFEGAVEVFNDMIGKDTISWNSVIAA 250
            LG  IHSK+VKLGLE  + VV NCLIDMYGKC   + AV VF  M  KDT+SWN+++A+
Sbjct: 173 PLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVAS 232

Query: 251 SARNGRLEQASRYLQQMPRPDTISFNELINGYAQFGDIEYAVEILSKMDSPNSSSWNAVL 310
            +RNG+LE    +  QMP PDT+++NELI+ + + GD   A ++LS M +PNSSSWN +L
Sbjct: 233 CSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTIL 292

Query: 311 TGYVDRDETWEALSFFTKMHSCDVRMDQFTFSSILSGVAGLSALKWGLAIHCCITKCGLD 370
           TGYV+ +++ EA  FFTKMHS  VR D+++ S +L+ VA L+ + WG  IH C  K GLD
Sbjct: 293 TGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLD 352

Query: 371 TSTVVGSALISMYSKCGHVNYAEMIFQSLPKKNLVSWNAMISGLAHNGKTMEVIHLFEKL 430
           +  VV SALI MYSKCG + +AE++F ++P+KNL+ WN MISG A NG ++E I LF +L
Sbjct: 353 SRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQL 412

Query: 431 KKTKDVKPDNITFLNILLSCSDNQVPLEATMQYYKSMVEDYGIKPTIEHCCTMVRLMGQR 490
           K+ + +KPD  TFLN+L  CS  +VP+E  + Y++ M+ +Y IKP++EHCC+++R MGQR
Sbjct: 413 KQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQR 472

Query: 491 GDVYGSKRLIHELGFDSSGPVWRALLGACGVLRDLKLAKVAAAKVIVFGAA--DDYVYVM 550
           G+V+ +K++I E GF   G  WRALLGAC   +DLK AK  AAK+I  G A  D+Y+Y++
Sbjct: 473 GEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIV 532

Query: 551 MSNIFASHGKWRDVKLVRELMRNKGVRKETGYSWL 583
           MSN++A H +WR+V  +R++MR  GV KE G SW+
Sbjct: 533 MSNLYAYHERWREVGQIRKIMRESGVLKEVGSSWI 567

[Close]

BLAST of CSPI03G02610 vs. ExPASy Swiss-Prot
Match: Q9FWA6 (Pentatricopeptide repeat-containing protein At3g02330, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E90 PE=2 SV=2)

HSP 1 Score: 285.8 bits (730), Expect = 1.1e-75
Identity = 176/569 (30.93%), Postives = 297/569 (52.20%), Query Frame = 0


Query: 79  LVRACTSHALDSCGHQLHSYILRSGFASNVFVGTAMVNFYIKTESFDSAHKLFDEMPQPS 138
           ++R+C + +    G QLH++ L+S FA++  V TA ++ Y K ++   A  LFD     +
Sbjct: 287 VLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLN 346

Query: 139 LVTWNSLISGYVHCGQFRKALCLFIQLDGSGNLVDSYSSSIALSASGHLGWLILGQSIHS 198
             ++N++I+GY       KAL LF +L  SG   D  S S    A   +  L  G  I+ 
Sbjct: 347 RQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYG 406

Query: 199 KVVKLGLEDSTVVANCLIDMYGKCESFEGAVEVFNDMIGKDTISWNSVIAASARNGRLEQ 258
             +K  L     VAN  IDMYGKC++   A  VF++M  +D +SWN++IAA  +NG+  +
Sbjct: 407 LAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYE 466

Query: 259 ASRYLQQMPR----PDTISFN----------------------------------ELING 318
                  M R    PD  +F                                    LI+ 
Sbjct: 467 TLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDM 526

Query: 319 YAQFGDIEYA----------------VEILSKMDSPNSS----SWNAVLTGYVDRDETWE 378
           Y++ G IE A                +E L KM +        SWN++++GYV ++++ +
Sbjct: 527 YSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSED 586

Query: 379 ALSFFTKMHSCDVRMDQFTFSSILSGVAGLSALKWGLAIHCCITKCGLDTSTVVGSALIS 438
           A   FT+M    +  D+FT++++L   A L++   G  IH  + K  L +   + S L+ 
Sbjct: 587 AQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVD 646

Query: 439 MYSKCGHVNYAEMIFQSLPKKNLVSWNAMISGLAHNGKTMEVIHLFEKLKKTKDVKPDNI 498
           MYSKCG ++ + ++F+   +++ V+WNAMI G AH+GK  E I LFE++   +++KP+++
Sbjct: 647 MYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERM-ILENIKPNHV 706

Query: 499 TFLNILLSCSDNQVPLEATMQYYKSMVEDYGIKPTIEHCCTMVRLMGQRGDVYGSKRLIH 558
           TF++IL +C+   + ++  ++Y+  M  DYG+ P + H   MV ++G+ G V  +  LI 
Sbjct: 707 TFISILRACAHMGL-IDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIR 766

Query: 559 ELGFDSSGPVWRALLGACGVLR-DLKLAKVAAAKVIVFGAADDYVYVMMSNIFASHGKWR 589
           E+ F++   +WR LLG C + R ++++A+ A A ++     D   Y ++SN++A  G W 
Sbjct: 767 EMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWE 826

[Close]

BLAST of CSPI03G02610 vs. ExPASy Swiss-Prot
Match: O04659 (Pentatricopeptide repeat-containing protein At5g27110 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E14 PE=2 SV=2)

HSP 1 Score: 282.3 bits (721), Expect = 1.2e-74
Identity = 168/560 (30.00%), Postives = 289/560 (51.61%), Query Frame = 0


Query: 69  CNPNGYALVQLVRACTSHALDSCGHQLHSYILRSGFASNVFVGTAMVNFYIKTESFDSAH 128
           C P+ +    +++A  +   +  G  +H+ +++SG+  +V V +++V  Y K   F+++ 
Sbjct: 103 CVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSL 162

Query: 129 KLFDEMPQPSLVTWNSLISGYVHCGQFRKALCLFIQLDGSGNLVDSYSSSIALSASGHLG 188
           ++FDEMP+  + +WN++IS +   G+  KAL LF +++ SG   +S S ++A+SA   L 
Sbjct: 163 QVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLL 222

Query: 189 WLILGQSIHSKVVKLGLEDSTVVANCLIDMYGKCESFEGAVEVFNDMIGKDTISWNSVIA 248
           WL  G+ IH K VK G E    V + L+DMYGKC+  E A EVF  M  K  ++WNS+I 
Sbjct: 223 WLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIK 282

Query: 249 ASARNGRLEQASRYLQQM----PRPDTISFN----------------------------- 308
                G  +     L +M     RP   +                               
Sbjct: 283 GYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNA 342

Query: 309 ------ELINGYAQFGDIEYAVEILSKMDSPNSSSWNAVLTGYVDRDETWEALSFFTKMH 368
                  LI+ Y + G+   A  + SK     + SWN +++ Y+     ++A+  + +M 
Sbjct: 343 DIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMV 402

Query: 369 SCDVRMDQFTFSSILSGVAGLSALKWGLAIHCCITKCGLDTSTVVGSALISMYSKCGHVN 428
           S  V+ D  TF+S+L   + L+AL+ G  IH  I++  L+T  ++ SAL+ MYSKCG+  
Sbjct: 403 SVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEK 462

Query: 429 YAEMIFQSLPKKNLVSWNAMISGLAHNGKTMEVIHLFEKLKKTKDVKPDNITFLNILLSC 488
            A  IF S+PKK++VSW  MIS    +G+  E ++ F++++K   +KPD +T L +L +C
Sbjct: 463 EAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKF-GLKPDGVTLLAVLSAC 522

Query: 489 SDNQVPLEATMQYYKSMVEDYGIKPTIEHCCTMVRLMGQRGDVYGSKRLIHELGFDS-SG 548
               + ++  ++++  M   YGI+P IEH   M+ ++G+ G +  +  +I +    S + 
Sbjct: 523 GHAGL-IDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNA 582

Query: 549 PVWRALLGACGVLRDLKLAKVAAAKVIVFGAADDYVYVMMSNIFASHGKWRDVKLVRELM 589
            +   L  AC +  +  L    A  ++     D   Y+++ N++AS   W   + VR  M
Sbjct: 583 ELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKM 642

[Close]

BLAST of CSPI03G02610 vs. ExPASy Swiss-Prot
Match: Q9SIT7 (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E76 PE=3 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 6.1e-74
Identity = 166/518 (32.05%), Postives = 270/518 (52.12%), Query Frame = 0


Query: 72  NGYALVQLVRACTSHALDSCGHQLHSYILRSGFASNVFVGTAMVNFYIKTESFDSAHKLF 131
           N Y+   ++ AC+     + G Q+HS I +S F S+V++G+A+V+ Y K  + + A ++F
Sbjct: 151 NEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVF 210

Query: 132 DEMPQPSLVTWNSLISGYVHCGQFRKALCLFIQLDGSGNLVDSYSSSIALSASGHLGWLI 191
           DEM   ++V+WNSLI+ +   G   +AL +F  +  S    D  + +  +SA   L  + 
Sbjct: 211 DEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIK 270

Query: 192 LGQSIHSKVVKLG-LEDSTVVANCLIDMYGKCESFEGAVEVFNDMIGKDTISWNSVIAAS 251
           +GQ +H +VVK   L +  +++N  +DMY KC                            
Sbjct: 271 VGQEVHGRVVKNDKLRNDIILSNAFVDMYAKC---------------------------- 330

Query: 252 ARNGRLEQASRYLQQMPRPDTISFNELINGYAQFGDIEYAVEILSKMDSPNSSSWNAVLT 311
               R+++A      MP  + I+   +I+GYA     + A  + +KM   N  SWNA++ 
Sbjct: 331 ---SRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIA 390

Query: 312 GYVDRDETWEALSFFTKMHSCDVRMDQFTFSSILSGVAGLSALKWGLAIHCCITKCGL-- 371
           GY    E  EALS F  +    V    ++F++IL   A L+ L  G+  H  + K G   
Sbjct: 391 GYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKF 450

Query: 372 ----DTSTVVGSALISMYSKCGHVNYAEMIFQSLPKKNLVSWNAMISGLAHNGKTMEVIH 431
               +    VG++LI MY KCG V    ++F+ + +++ VSWNAMI G A NG   E + 
Sbjct: 451 QSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALE 510

Query: 432 LFEKLKKTKDVKPDNITFLNILLSCSDNQVPLEATMQYYKSMVEDYGIKPTIEHCCTMVR 491
           LF ++ ++ + KPD+IT + +L +C      +E    Y+ SM  D+G+ P  +H   MV 
Sbjct: 511 LFREMLESGE-KPDHITMIGVLSACGHAGF-VEEGRHYFSSMTRDFGVAPLRDHYTCMVD 570

Query: 492 LMGQRGDVYGSKRLIHELGFDSSGPVWRALLGACGVLRDLKLAKVAAAKVIVFGAADDYV 551
           L+G+ G +  +K +I E+       +W +LL AC V R++ L K  A K++    ++   
Sbjct: 571 LLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGP 630

Query: 552 YVMMSNIFASHGKWRDVKLVRELMRNKGVRKETGYSWL 583
           YV++SN++A  GKW DV  VR+ MR +GV K+ G SW+
Sbjct: 631 YVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWI 635

[Close]

BLAST of CSPI03G02610 vs. ExPASy Swiss-Prot
Match: Q9FIB2 (Putative pentatricopeptide repeat-containing protein At5g09950 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H35 PE=3 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 2.3e-73
Identity = 164/535 (30.65%), Postives = 284/535 (53.08%), Query Frame = 0


Query: 92  GHQLHSYILRSGFAS-NVFVGTAMVNFYIKTESFDSAHKLFDEMPQPSLVTWNSLISGYV 151
           G ++H +++ +G     V +G  +VN Y K  S   A ++F  M     V+WNS+I+G  
Sbjct: 332 GREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLD 391

Query: 152 HCGQFRKALCLFIQLDGSGNLVDSYSSSIALSASGHLGWLILGQSIHSKVVKLGLEDSTV 211
             G F +A+  +  +     L  S++   +LS+   L W  LGQ IH + +KLG++ +  
Sbjct: 392 QNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVS 451

Query: 212 VANCLIDMYGKCESFEGAVEVFNDMIGKDTISWNSVIAASARNGR--------LEQASRY 271
           V+N L+ +Y +        ++F+ M   D +SWNS+I A AR+ R           A R 
Sbjct: 452 VSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRA 511

Query: 272 LQQMPR---------PDTISFNEL---ING--------------------YAQFGDIEYA 331
            Q++ R           ++SF EL   I+G                    Y + G+++  
Sbjct: 512 GQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGC 571

Query: 332 VEILSKM-DSPNSSSWNAVLTGYVDRDETWEALSFFTKMHSCDVRMDQFTFSSILSGVAG 391
            +I S+M +  ++ +WN++++GY+  +   +AL     M     R+D F ++++LS  A 
Sbjct: 572 EKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFAS 631

Query: 392 LSALKWGLAIHCCITKCGLDTSTVVGSALISMYSKCGHVNYAEMIFQSLPKKNLVSWNAM 451
           ++ L+ G+ +H C  +  L++  VVGSAL+ MYSKCG ++YA   F ++P +N  SWN+M
Sbjct: 632 VATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSM 691

Query: 452 ISGLAHNGKTMEVIHLFEKLKKTKDVKPDNITFLNILLSCSDNQVPLEATMQYYKSMVED 511
           ISG A +G+  E + LFE +K      PD++TF+ +L +CS   + LE   ++++SM + 
Sbjct: 692 ISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGL-LEEGFKHFESMSDS 751

Query: 512 YGIKPTIEHCCTMVRLMGQRGDVYGSKRLIHELGFDSSGPVWRALLGAC--GVLRDLKLA 571
           YG+ P IEH   M  ++G+ G++   +  I ++    +  +WR +LGAC     R  +L 
Sbjct: 752 YGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELG 811

Query: 572 KVAAAKVIVFGAADDYVYVMMSNIFASHGKWRDVKLVRELMRNKGVRKETGYSWL 583
           K AA  +      +   YV++ N++A+ G+W D+   R+ M++  V+KE GYSW+
Sbjct: 812 KKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWV 865

[Close]

BLAST of CSPI03G02610 vs. ExPASy TrEMBL
Match: A0A0A0L6U8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G019960 PE=4 SV=1)

HSP 1 Score: 1192.6 bits (3084), Expect = 0.0e+00
Identity = 589/593 (99.33%), Postives = 590/593 (99.49%), Query Frame = 0


Query: 1   MQRPFSTKLVLKPLLQKPSAIISIHNASNFQPCFSIDDQAPSTAIRTALAGGGHTADLAL 60
           MQRPFSTKLVLKPLLQKPSAIISIHNASNFQPCFSIDDQAPSTAIRTALAGGGHTADLAL
Sbjct: 1   MQRPFSTKLVLKPLLQKPSAIISIHNASNFQPCFSIDDQAPSTAIRTALAGGGHTADLAL 60

Query: 61  AEAFRALKCNPNGYALVQLVRACTSHALDSCGHQLHSYILRSGFASNVFVGTAMVNFYIK 120
           AEAFRALKCNPNGYALVQLVRACTSHALDSCGHQLHSYILRSGFASNVFVGTAMVNFYIK
Sbjct: 61  AEAFRALKCNPNGYALVQLVRACTSHALDSCGHQLHSYILRSGFASNVFVGTAMVNFYIK 120

Query: 121 TESFDSAHKLFDEMPQPSLVTWNSLISGYVHCGQFRKALCLFIQLDGSGNLVDSYSSSIA 180
           TESFDSAHKLFDEMPQPSLVTWNSLISGYVHCGQFRKALCLFIQLDGSGNLVDSYS SIA
Sbjct: 121 TESFDSAHKLFDEMPQPSLVTWNSLISGYVHCGQFRKALCLFIQLDGSGNLVDSYSLSIA 180

Query: 181 LSASGHLGWLILGQSIHSKVVKLGLEDSTVVANCLIDMYGKCESFEGAVEVFNDMIGKDT 240
           LSASGHLGWLILGQSIHSKV+KLGLEDSTVVANCLIDMYGKCESFEGAVEVFNDMIGKDT
Sbjct: 181 LSASGHLGWLILGQSIHSKVIKLGLEDSTVVANCLIDMYGKCESFEGAVEVFNDMIGKDT 240

Query: 241 ISWNSVIAASARNGRLEQASRYLQQMPRPDTISFNELINGYAQFGDIEYAVEILSKMDSP 300
           ISWNSVIAASARNGRLEQASRYLQQMPRPDTISFNELINGYAQFGDIEYAVEILSKMDSP
Sbjct: 241 ISWNSVIAASARNGRLEQASRYLQQMPRPDTISFNELINGYAQFGDIEYAVEILSKMDSP 300

Query: 301 NSSSWNAVLTGYVDRDETWEALSFFTKMHSCDVRMDQFTFSSILSGVAGLSALKWGLAIH 360
           NSSSWNAVLTGYVDRDETWEALSFFTKMHSCDVRMDQFTFSSILSGVAGLSALKWGLAIH
Sbjct: 301 NSSSWNAVLTGYVDRDETWEALSFFTKMHSCDVRMDQFTFSSILSGVAGLSALKWGLAIH 360

Query: 361 CCITKCGLDTSTVVGSALISMYSKCGHVNYAEMIFQSLPKKNLVSWNAMISGLAHNGKTM 420
           CCITKCGLDTSTVVGSALISMYSKCGHVNYAEMIFQSLPKKNLVSWNAMISGLAHNGKTM
Sbjct: 361 CCITKCGLDTSTVVGSALISMYSKCGHVNYAEMIFQSLPKKNLVSWNAMISGLAHNGKTM 420

Query: 421 EVIHLFEKLKKTKDVKPDNITFLNILLSCSDNQVPLEATMQYYKSMVEDYGIKPTIEHCC 480
           EVIHLFEKLK TKDVKPDNITFLNILLSCSDNQVPLEATMQYYKSMVEDYGIKPTIEHCC
Sbjct: 421 EVIHLFEKLKMTKDVKPDNITFLNILLSCSDNQVPLEATMQYYKSMVEDYGIKPTIEHCC 480

Query: 481 TMVRLMGQRGDVYGSKRLIHELGFDSSGPVWRALLGACGVLRDLKLAKVAAAKVIVFGAA 540
           TMVRLMGQRGDVYGSKRLIHELGFDSSGPVWRALLGACGVLRDLKLAKVAAAKVIV GAA
Sbjct: 481 TMVRLMGQRGDVYGSKRLIHELGFDSSGPVWRALLGACGVLRDLKLAKVAAAKVIVLGAA 540

Query: 541 DDYVYVMMSNIFASHGKWRDVKLVRELMRNKGVRKETGYSWLIEMENEFVLSY 594
           DDYVYVMMSNIFASHGKWRDVKLVRELMRNKGVRKETGYSWLIEMENEFVLSY
Sbjct: 541 DDYVYVMMSNIFASHGKWRDVKLVRELMRNKGVRKETGYSWLIEMENEFVLSY 593

[Close]

BLAST of CSPI03G02610 vs. ExPASy TrEMBL
Match: A0A5D3CKT8 (Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00420 PE=4 SV=1)

HSP 1 Score: 1134.0 bits (2932), Expect = 0.0e+00
Identity = 563/592 (95.10%), Postives = 574/592 (96.96%), Query Frame = 0


Query: 1   MQRPFSTKLVLKPLLQKPSAIISIHNASNFQPCFSIDDQAPSTAIRTALAGGGHTADLAL 60
           MQRPFSTKLVLKPLLQKPSAIISIHNASNFQPCFS+DDQAPSTA+RTALAGGGHTA+LAL
Sbjct: 1   MQRPFSTKLVLKPLLQKPSAIISIHNASNFQPCFSVDDQAPSTALRTALAGGGHTAELAL 60

Query: 61  AEAFRALKCNPNGYALVQLVRACTSHALDSCGHQLHSYILRSGFASNVFVGTAMVNFYIK 120
           AEAFRALKCNPNGYALVQLVRACTSHA DSCGHQLHSYILRSGFASNVFVGTAMVNFYIK
Sbjct: 61  AEAFRALKCNPNGYALVQLVRACTSHAWDSCGHQLHSYILRSGFASNVFVGTAMVNFYIK 120

Query: 121 TESFDSAHKLFDEMPQPSLVTWNSLISGYVHCGQFRKALCLFIQLDGSGNLVDSYSSSIA 180
           TESFDSAHKLFDEMPQPSLVTWNSLISGYV CGQFRKALCLFIQLDGS NLVDSYS SIA
Sbjct: 121 TESFDSAHKLFDEMPQPSLVTWNSLISGYVRCGQFRKALCLFIQLDGSENLVDSYSLSIA 180

Query: 181 LSASGHLGWLILGQSIHSKVVKLGLEDSTVVANCLIDMYGKCESFEGAVEVFNDMIGKDT 240
           LSASGHLGWLILGQSIHSKVVKLGLED+TVVANCLIDMYGKCESFEGAVEVFNDMIGKDT
Sbjct: 181 LSASGHLGWLILGQSIHSKVVKLGLEDNTVVANCLIDMYGKCESFEGAVEVFNDMIGKDT 240

Query: 241 ISWNSVIAASARNGRLEQASRYLQQMPRPDTISFNELINGYAQFGDIEYAVEILSKMDSP 300
           ISWNSVIAASARN RLEQASRYLQ+MPRPDTISFNELINGYAQFGDIEYAVEILSKMDSP
Sbjct: 241 ISWNSVIAASARNRRLEQASRYLQRMPRPDTISFNELINGYAQFGDIEYAVEILSKMDSP 300

Query: 301 NSSSWNAVLTGYVDRDETWEALSFFTKMHSCDVRMDQFTFSSILSGVAGLSALKWGLAIH 360
           NSSSWNAVLTGYVDRDETW+ALSFFTKMHSCDV MDQFTFSSILSGVAGLSAL+WGLAIH
Sbjct: 301 NSSSWNAVLTGYVDRDETWKALSFFTKMHSCDVGMDQFTFSSILSGVAGLSALEWGLAIH 360

Query: 361 CCITKCGLDTSTVVGSALISMYSKCGHVNYAEMIFQSLPKKNLVSWNAMISGLAHNGKTM 420
           CCITKCGLDTSTVVGSALI+MYSKCGHVN AE+IFQSLPKKNLVSWNAMISGLAHNGKTM
Sbjct: 361 CCITKCGLDTSTVVGSALINMYSKCGHVNSAEIIFQSLPKKNLVSWNAMISGLAHNGKTM 420

Query: 421 EVIHLFEKLKKTKDVKPDNITFLNILLSCSDNQVPLEATMQYYKSMVEDYGIKPTIEHCC 480
           EVI LFEKLKKTKDVKPDNITFL IL SCSDNQVPLEATMQ +KSMVEDYGIKPTIEHCC
Sbjct: 421 EVIRLFEKLKKTKDVKPDNITFLYILPSCSDNQVPLEATMQCFKSMVEDYGIKPTIEHCC 480

Query: 481 TMVRLMGQRGDVYGSKRLIHELGFDSSGPVWRALLGACGVLRDLKLAKVAAAKVIVFGAA 540
           TMVRLMGQRGDV+GSKRLIHELGFDSSG VWRALLGACGVLRDLKLAKVAAAKVIV GAA
Sbjct: 481 TMVRLMGQRGDVHGSKRLIHELGFDSSGSVWRALLGACGVLRDLKLAKVAAAKVIVLGAA 540

Query: 541 DDYVYVMMSNIFASHGKWRDVKLVRELMRNKGVRKETGYSWLIEMENEFVLS 593
           DDYVYVMMSNIFASHGKWRDVKLVRELM  KG RKETGYSWLIEMENE  LS
Sbjct: 541 DDYVYVMMSNIFASHGKWRDVKLVRELMSKKGFRKETGYSWLIEMENEIFLS 592

[Close]

BLAST of CSPI03G02610 vs. ExPASy TrEMBL
Match: A0A1S3BK19 (putative pentatricopeptide repeat-containing protein At5g47460 OS=Cucumis melo OX=3656 GN=LOC103490879 PE=4 SV=1)

HSP 1 Score: 1131.7 bits (2926), Expect = 0.0e+00
Identity = 562/592 (94.93%), Postives = 573/592 (96.79%), Query Frame = 0


Query: 1   MQRPFSTKLVLKPLLQKPSAIISIHNASNFQPCFSIDDQAPSTAIRTALAGGGHTADLAL 60
           MQRPFSTKLVLKPLLQKPSAIISIHNASNFQPCFS+DDQAPSTA+RTALAGGGHTA+LAL
Sbjct: 1   MQRPFSTKLVLKPLLQKPSAIISIHNASNFQPCFSVDDQAPSTALRTALAGGGHTAELAL 60

Query: 61  AEAFRALKCNPNGYALVQLVRACTSHALDSCGHQLHSYILRSGFASNVFVGTAMVNFYIK 120
           AEAFRALKCNPNGYALVQLVRACTSHA DSCGHQLHSYILRSGFASNVFVGTAMVNFYIK
Sbjct: 61  AEAFRALKCNPNGYALVQLVRACTSHAWDSCGHQLHSYILRSGFASNVFVGTAMVNFYIK 120

Query: 121 TESFDSAHKLFDEMPQPSLVTWNSLISGYVHCGQFRKALCLFIQLDGSGNLVDSYSSSIA 180
           TESFDSAHKLFDEMPQPSLVTWNSLISGYV CGQFRKALCLFIQLDGS NLVDSYS SIA
Sbjct: 121 TESFDSAHKLFDEMPQPSLVTWNSLISGYVRCGQFRKALCLFIQLDGSENLVDSYSLSIA 180

Query: 181 LSASGHLGWLILGQSIHSKVVKLGLEDSTVVANCLIDMYGKCESFEGAVEVFNDMIGKDT 240
           LSASGHLGWLILGQSIHSKVVKLGLED+TVVANCLIDMYGKCESFEGAVEVFNDMIGKDT
Sbjct: 181 LSASGHLGWLILGQSIHSKVVKLGLEDNTVVANCLIDMYGKCESFEGAVEVFNDMIGKDT 240

Query: 241 ISWNSVIAASARNGRLEQASRYLQQMPRPDTISFNELINGYAQFGDIEYAVEILSKMDSP 300
           ISWNSVIAASARN RLEQASRYLQ MPRPDTISFNELINGYAQFGDIEYAVEILSKMDSP
Sbjct: 241 ISWNSVIAASARNRRLEQASRYLQLMPRPDTISFNELINGYAQFGDIEYAVEILSKMDSP 300

Query: 301 NSSSWNAVLTGYVDRDETWEALSFFTKMHSCDVRMDQFTFSSILSGVAGLSALKWGLAIH 360
           NSSSWNAVLTGYVDRDETW+ALSFFTKMHSCDV MDQFTFSSILSGVAGLSAL+WGLAIH
Sbjct: 301 NSSSWNAVLTGYVDRDETWKALSFFTKMHSCDVGMDQFTFSSILSGVAGLSALEWGLAIH 360

Query: 361 CCITKCGLDTSTVVGSALISMYSKCGHVNYAEMIFQSLPKKNLVSWNAMISGLAHNGKTM 420
           CCITKCGLDTSTVVGSALI+MYSKCGHVN AE+IFQSLPKKNLVSWNAMISGLAHNGKTM
Sbjct: 361 CCITKCGLDTSTVVGSALINMYSKCGHVNSAEIIFQSLPKKNLVSWNAMISGLAHNGKTM 420

Query: 421 EVIHLFEKLKKTKDVKPDNITFLNILLSCSDNQVPLEATMQYYKSMVEDYGIKPTIEHCC 480
           EVI LFEKLKKTKDVKPDNITFL IL SCSDNQVPLEATMQ +KSMVEDYGIKPTIEHCC
Sbjct: 421 EVIRLFEKLKKTKDVKPDNITFLYILPSCSDNQVPLEATMQCFKSMVEDYGIKPTIEHCC 480

Query: 481 TMVRLMGQRGDVYGSKRLIHELGFDSSGPVWRALLGACGVLRDLKLAKVAAAKVIVFGAA 540
           TMVRLMGQRGDV+GSKRLIHELGFDSSG VWRALLGACGVLRDLKLAKVAAAKVIV GAA
Sbjct: 481 TMVRLMGQRGDVHGSKRLIHELGFDSSGSVWRALLGACGVLRDLKLAKVAAAKVIVLGAA 540

Query: 541 DDYVYVMMSNIFASHGKWRDVKLVRELMRNKGVRKETGYSWLIEMENEFVLS 593
           DDYVYVM+SNIFASHGKWRDVKLVRELM  KG RKETGYSWLIEMENE  LS
Sbjct: 541 DDYVYVMLSNIFASHGKWRDVKLVRELMSKKGFRKETGYSWLIEMENEIFLS 592

[Close]

BLAST of CSPI03G02610 vs. ExPASy TrEMBL
Match: A0A6J1L1J5 (putative pentatricopeptide repeat-containing protein At5g47460 OS=Cucurbita maxima OX=3661 GN=LOC111500270 PE=4 SV=1)

HSP 1 Score: 1013.8 bits (2620), Expect = 2.9e-292
Identity = 503/593 (84.82%), Postives = 539/593 (90.89%), Query Frame = 0


Query: 1   MQRPFSTKLVL-----KPLLQKPSAIISIHNASNFQPCFSIDDQAPSTAIRTALAGGGHT 60
           MQ+PF TKL L     KPLLQK +A ISI NA NFQPCFS + Q P T+ R  LAGGG T
Sbjct: 1   MQKPFYTKLQLYLQTQKPLLQKSAATISIQNACNFQPCFSTNYQDPWTSFRMVLAGGGRT 60

Query: 61  ADLALAEAFRALKCNPNGYALVQLVRACTSHALDSCGHQLHSYILRSGFASNVFVGTAMV 120
           A+LALAEAF+ALKCNPNGYALVQLVRACT+HA DSCGHQLHSYILRSGFASNVFVGTAMV
Sbjct: 61  AELALAEAFQALKCNPNGYALVQLVRACTTHAWDSCGHQLHSYILRSGFASNVFVGTAMV 120

Query: 121 NFYIKTESFDSAHKLFDEMPQPSLVTWNSLISGYVHCGQFRKALCLFIQLDGSGNLVDSY 180
           NFY+K+ESFDSAHK+FDEMPQP+LV+WNSLISGYVHCGQFR AL  FI LDGS NLVDSY
Sbjct: 121 NFYVKSESFDSAHKVFDEMPQPNLVSWNSLISGYVHCGQFRNALSSFIALDGSENLVDSY 180

Query: 181 SSSIALSASGHLGWLILGQSIHSKVVKLGLEDSTVVANCLIDMYGKCESFEGAVEVFNDM 240
           S S AL+ASG LGWLILGQSIHSKVVKLGLE++T+VANCLID YGKCESFE AV+VFNDM
Sbjct: 181 SLSAALNASGQLGWLILGQSIHSKVVKLGLENNTIVANCLIDTYGKCESFEEAVKVFNDM 240

Query: 241 IGKDTISWNSVIAASARNGRLEQASRYLQQMPRPDTISFNELINGYAQFGDIEYAVEILS 300
           I KDTISWNSVIAASARNGRLEQASRYL+QMPRPDTIS+NELING AQFGDIE AVEILS
Sbjct: 241 IDKDTISWNSVIAASARNGRLEQASRYLRQMPRPDTISYNELINGCAQFGDIEEAVEILS 300

Query: 301 KMDSPNSSSWNAVLTGYVDRDETWEALSFFTKMHSCDVRMDQFTFSSILSGVAGLSALKW 360
            MDSPNSSSWNAVLTGYVDRDE W+ALSFFTKMHSC++ MDQFTFSSILSGVAGLSAL W
Sbjct: 301 TMDSPNSSSWNAVLTGYVDRDEAWKALSFFTKMHSCNIGMDQFTFSSILSGVAGLSALTW 360

Query: 361 GLAIHCCITKCGLDTSTVVGSALISMYSKCGHVNYAEMIFQSLPKKNLVSWNAMISGLAH 420
           G +IHCCITK GLDTSTVVGSALI MYSKCGHVNYAEMIFQSLPKKNLVSWNAMISGLA 
Sbjct: 361 GSSIHCCITKRGLDTSTVVGSALIDMYSKCGHVNYAEMIFQSLPKKNLVSWNAMISGLAR 420

Query: 421 NGKTMEVIHLFEKLKKTKDVKPDNITFLNILLSCSDNQVPLEATMQYYKSMVEDYGIKPT 480
           NGKTMEVIHLFEKLK  KDV PD+ITFL+ILLSCSDNQVPLE TMQY+KSM+ED+GI+PT
Sbjct: 421 NGKTMEVIHLFEKLKTMKDVTPDSITFLSILLSCSDNQVPLETTMQYFKSMIEDFGIEPT 480

Query: 481 IEHCCTMVRLMGQRGDVYGSKRLIHELGFDSSGPVWRALLGACGVLRDLKLAKVAAAKVI 540
           +EHCCTMVRLMGQRGDVY SK+LIHELGFDS+G VWRALLGAC + +DLKLAKVAAAKVI
Sbjct: 481 VEHCCTMVRLMGQRGDVYRSKKLIHELGFDSNGSVWRALLGACALWKDLKLAKVAAAKVI 540

Query: 541 VFGAADDYVYVMMSNIFASHGKWRDVKLVRELMRNKGVRKETGYSWLIEMENE 589
             GAADDYV+VMMSNI ASHGKWRDV+ VRELMR KGVRKETGYSWLIEMENE
Sbjct: 541 ELGAADDYVHVMMSNILASHGKWRDVREVRELMRKKGVRKETGYSWLIEMENE 593

[Close]

BLAST of CSPI03G02610 vs. ExPASy TrEMBL
Match: A0A6J1E9S2 (putative pentatricopeptide repeat-containing protein At5g47460 OS=Cucurbita moschata OX=3662 GN=LOC111431163 PE=4 SV=1)

HSP 1 Score: 998.8 bits (2581), Expect = 9.5e-288
Identity = 499/593 (84.15%), Postives = 534/593 (90.05%), Query Frame = 0


Query: 1   MQRPFSTKLVL-----KPLLQKPSAIISIHNASNFQPCFSIDDQAPSTAIRTALAGGGHT 60
           MQR F+TKL L      PLLQK +A ISI NA NFQPCFS + Q P T+ R  LAGGG T
Sbjct: 1   MQRSFATKLQLYLQTQNPLLQKFAATISIQNACNFQPCFSTNYQDPWTSFRMVLAGGGRT 60

Query: 61  ADLALAEAFRALKCNPNGYALVQLVRACTSHALDSCGHQLHSYILRSGFASNVFVGTAMV 120
           A+LALAEAF+ALKCNPNGYALVQLVRACT+HA DSCG QLHSYILRSGFASNVFVGTAMV
Sbjct: 61  AELALAEAFQALKCNPNGYALVQLVRACTTHAWDSCGRQLHSYILRSGFASNVFVGTAMV 120

Query: 121 NFYIKTESFDSAHKLFDEMPQPSLVTWNSLISGYVHCGQFRKALCLFIQLDGSGNLVDSY 180
           NFY+K+ESFDSAHK+FDEMPQP+LV+WNSLISGYVHCGQFR AL  FI LDGS NLVDSY
Sbjct: 121 NFYVKSESFDSAHKVFDEMPQPNLVSWNSLISGYVHCGQFRNALSSFIALDGSENLVDSY 180

Query: 181 SSSIALSASGHLGWLILGQSIHSKVVKLGLEDSTVVANCLIDMYGKCESFEGAVEVFNDM 240
           S S ALSASG LG LILGQSIHSK VKLGLE++T+VANCLIDMYGKCESFE AV+VFNDM
Sbjct: 181 SLSAALSASGQLGLLILGQSIHSKAVKLGLENNTIVANCLIDMYGKCESFEEAVKVFNDM 240

Query: 241 IGKDTISWNSVIAASARNGRLEQASRYLQQMPRPDTISFNELINGYAQFGDIEYAVEILS 300
           I KDTISWNSVIAASARNGRLEQAS YL+QMPRPDTIS+NELING AQFGDIE AVEILS
Sbjct: 241 IDKDTISWNSVIAASARNGRLEQASSYLRQMPRPDTISYNELINGCAQFGDIEEAVEILS 300

Query: 301 KMDSPNSSSWNAVLTGYVDRDETWEALSFFTKMHSCDVRMDQFTFSSILSGVAGLSALKW 360
            MDSPNSSSWNAVLTGYVDRDE W+ALSFFTKMHSC+V MDQFTFSSILSGVAGLSAL W
Sbjct: 301 TMDSPNSSSWNAVLTGYVDRDEAWKALSFFTKMHSCNVDMDQFTFSSILSGVAGLSALTW 360

Query: 361 GLAIHCCITKCGLDTSTVVGSALISMYSKCGHVNYAEMIFQSLPKKNLVSWNAMISGLAH 420
           G +IHCCITK GLDTSTVVGSALI MYSKCGHVNYAEMIFQSLPKKNLVSWNAMISGLA 
Sbjct: 361 GSSIHCCITKRGLDTSTVVGSALIDMYSKCGHVNYAEMIFQSLPKKNLVSWNAMISGLAQ 420

Query: 421 NGKTMEVIHLFEKLKKTKDVKPDNITFLNILLSCSDNQVPLEATMQYYKSMVEDYGIKPT 480
           NGKTMEVIHLFEKLK  KDV PD+ITFL++LLSCSDNQVPLE TMQY+KSM+ED+GIKPT
Sbjct: 421 NGKTMEVIHLFEKLKTMKDVTPDSITFLSLLLSCSDNQVPLETTMQYFKSMIEDFGIKPT 480

Query: 481 IEHCCTMVRLMGQRGDVYGSKRLIHELGFDSSGPVWRALLGACGVLRDLKLAKVAAAKVI 540
           +EHCCTMVRL+GQRGDVY SKRLIHELGFDS+G VWRA+LGAC V +DLKLAKVAAAKVI
Sbjct: 481 VEHCCTMVRLIGQRGDVYRSKRLIHELGFDSNGSVWRAVLGACAVWKDLKLAKVAAAKVI 540

Query: 541 VFGAADDYVYVMMSNIFASHGKWRDVKLVRELMRNKGVRKETGYSWLIEMENE 589
             GAADDYV+VMMSNI ASHGKWRDV+ VRE+MR KGVRKETGYSWLIEM NE
Sbjct: 541 ELGAADDYVHVMMSNILASHGKWRDVREVREVMRKKGVRKETGYSWLIEMANE 593

[Close]

BLAST of CSPI03G02610 vs. NCBI nr
Match: XP_004147255.2 (putative pentatricopeptide repeat-containing protein At5g47460 [Cucumis sativus])

HSP 1 Score: 1192.6 bits (3084), Expect = 0.0e+00
Identity = 589/593 (99.33%), Postives = 590/593 (99.49%), Query Frame = 0


Query: 1   MQRPFSTKLVLKPLLQKPSAIISIHNASNFQPCFSIDDQAPSTAIRTALAGGGHTADLAL 60
           MQRPFSTKLVLKPLLQKPSAIISIHNASNFQPCFSIDDQAPSTAIRTALAGGGHTADLAL
Sbjct: 1   MQRPFSTKLVLKPLLQKPSAIISIHNASNFQPCFSIDDQAPSTAIRTALAGGGHTADLAL 60

Query: 61  AEAFRALKCNPNGYALVQLVRACTSHALDSCGHQLHSYILRSGFASNVFVGTAMVNFYIK 120
           AEAFRALKCNPNGYALVQLVRACTSHALDSCGHQLHSYILRSGFASNVFVGTAMVNFYIK
Sbjct: 61  AEAFRALKCNPNGYALVQLVRACTSHALDSCGHQLHSYILRSGFASNVFVGTAMVNFYIK 120

Query: 121 TESFDSAHKLFDEMPQPSLVTWNSLISGYVHCGQFRKALCLFIQLDGSGNLVDSYSSSIA 180
           TESFDSAHKLFDEMPQPSLVTWNSLISGYVHCGQFRKALCLFIQLDGSGNLVDSYS SIA
Sbjct: 121 TESFDSAHKLFDEMPQPSLVTWNSLISGYVHCGQFRKALCLFIQLDGSGNLVDSYSLSIA 180

Query: 181 LSASGHLGWLILGQSIHSKVVKLGLEDSTVVANCLIDMYGKCESFEGAVEVFNDMIGKDT 240
           LSASGHLGWLILGQSIHSKV+KLGLEDSTVVANCLIDMYGKCESFEGAVEVFNDMIGKDT
Sbjct: 181 LSASGHLGWLILGQSIHSKVIKLGLEDSTVVANCLIDMYGKCESFEGAVEVFNDMIGKDT 240

Query: 241 ISWNSVIAASARNGRLEQASRYLQQMPRPDTISFNELINGYAQFGDIEYAVEILSKMDSP 300
           ISWNSVIAASARNGRLEQASRYLQQMPRPDTISFNELINGYAQFGDIEYAVEILSKMDSP
Sbjct: 241 ISWNSVIAASARNGRLEQASRYLQQMPRPDTISFNELINGYAQFGDIEYAVEILSKMDSP 300

Query: 301 NSSSWNAVLTGYVDRDETWEALSFFTKMHSCDVRMDQFTFSSILSGVAGLSALKWGLAIH 360
           NSSSWNAVLTGYVDRDETWEALSFFTKMHSCDVRMDQFTFSSILSGVAGLSALKWGLAIH
Sbjct: 301 NSSSWNAVLTGYVDRDETWEALSFFTKMHSCDVRMDQFTFSSILSGVAGLSALKWGLAIH 360

Query: 361 CCITKCGLDTSTVVGSALISMYSKCGHVNYAEMIFQSLPKKNLVSWNAMISGLAHNGKTM 420
           CCITKCGLDTSTVVGSALISMYSKCGHVNYAEMIFQSLPKKNLVSWNAMISGLAHNGKTM
Sbjct: 361 CCITKCGLDTSTVVGSALISMYSKCGHVNYAEMIFQSLPKKNLVSWNAMISGLAHNGKTM 420

Query: 421 EVIHLFEKLKKTKDVKPDNITFLNILLSCSDNQVPLEATMQYYKSMVEDYGIKPTIEHCC 480
           EVIHLFEKLK TKDVKPDNITFLNILLSCSDNQVPLEATMQYYKSMVEDYGIKPTIEHCC
Sbjct: 421 EVIHLFEKLKMTKDVKPDNITFLNILLSCSDNQVPLEATMQYYKSMVEDYGIKPTIEHCC 480

Query: 481 TMVRLMGQRGDVYGSKRLIHELGFDSSGPVWRALLGACGVLRDLKLAKVAAAKVIVFGAA 540
           TMVRLMGQRGDVYGSKRLIHELGFDSSGPVWRALLGACGVLRDLKLAKVAAAKVIV GAA
Sbjct: 481 TMVRLMGQRGDVYGSKRLIHELGFDSSGPVWRALLGACGVLRDLKLAKVAAAKVIVLGAA 540

Query: 541 DDYVYVMMSNIFASHGKWRDVKLVRELMRNKGVRKETGYSWLIEMENEFVLSY 594
           DDYVYVMMSNIFASHGKWRDVKLVRELMRNKGVRKETGYSWLIEMENEFVLSY
Sbjct: 541 DDYVYVMMSNIFASHGKWRDVKLVRELMRNKGVRKETGYSWLIEMENEFVLSY 593

[Close]

BLAST of CSPI03G02610 vs. NCBI nr
Match: KAA0041078.1 (putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK12030.1 putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1134.0 bits (2932), Expect = 0.0e+00
Identity = 563/592 (95.10%), Postives = 574/592 (96.96%), Query Frame = 0


Query: 1   MQRPFSTKLVLKPLLQKPSAIISIHNASNFQPCFSIDDQAPSTAIRTALAGGGHTADLAL 60
           MQRPFSTKLVLKPLLQKPSAIISIHNASNFQPCFS+DDQAPSTA+RTALAGGGHTA+LAL
Sbjct: 1   MQRPFSTKLVLKPLLQKPSAIISIHNASNFQPCFSVDDQAPSTALRTALAGGGHTAELAL 60

Query: 61  AEAFRALKCNPNGYALVQLVRACTSHALDSCGHQLHSYILRSGFASNVFVGTAMVNFYIK 120
           AEAFRALKCNPNGYALVQLVRACTSHA DSCGHQLHSYILRSGFASNVFVGTAMVNFYIK
Sbjct: 61  AEAFRALKCNPNGYALVQLVRACTSHAWDSCGHQLHSYILRSGFASNVFVGTAMVNFYIK 120

Query: 121 TESFDSAHKLFDEMPQPSLVTWNSLISGYVHCGQFRKALCLFIQLDGSGNLVDSYSSSIA 180
           TESFDSAHKLFDEMPQPSLVTWNSLISGYV CGQFRKALCLFIQLDGS NLVDSYS SIA
Sbjct: 121 TESFDSAHKLFDEMPQPSLVTWNSLISGYVRCGQFRKALCLFIQLDGSENLVDSYSLSIA 180

Query: 181 LSASGHLGWLILGQSIHSKVVKLGLEDSTVVANCLIDMYGKCESFEGAVEVFNDMIGKDT 240
           LSASGHLGWLILGQSIHSKVVKLGLED+TVVANCLIDMYGKCESFEGAVEVFNDMIGKDT
Sbjct: 181 LSASGHLGWLILGQSIHSKVVKLGLEDNTVVANCLIDMYGKCESFEGAVEVFNDMIGKDT 240

Query: 241 ISWNSVIAASARNGRLEQASRYLQQMPRPDTISFNELINGYAQFGDIEYAVEILSKMDSP 300
           ISWNSVIAASARN RLEQASRYLQ+MPRPDTISFNELINGYAQFGDIEYAVEILSKMDSP
Sbjct: 241 ISWNSVIAASARNRRLEQASRYLQRMPRPDTISFNELINGYAQFGDIEYAVEILSKMDSP 300

Query: 301 NSSSWNAVLTGYVDRDETWEALSFFTKMHSCDVRMDQFTFSSILSGVAGLSALKWGLAIH 360
           NSSSWNAVLTGYVDRDETW+ALSFFTKMHSCDV MDQFTFSSILSGVAGLSAL+WGLAIH
Sbjct: 301 NSSSWNAVLTGYVDRDETWKALSFFTKMHSCDVGMDQFTFSSILSGVAGLSALEWGLAIH 360

Query: 361 CCITKCGLDTSTVVGSALISMYSKCGHVNYAEMIFQSLPKKNLVSWNAMISGLAHNGKTM 420
           CCITKCGLDTSTVVGSALI+MYSKCGHVN AE+IFQSLPKKNLVSWNAMISGLAHNGKTM
Sbjct: 361 CCITKCGLDTSTVVGSALINMYSKCGHVNSAEIIFQSLPKKNLVSWNAMISGLAHNGKTM 420

Query: 421 EVIHLFEKLKKTKDVKPDNITFLNILLSCSDNQVPLEATMQYYKSMVEDYGIKPTIEHCC 480
           EVI LFEKLKKTKDVKPDNITFL IL SCSDNQVPLEATMQ +KSMVEDYGIKPTIEHCC
Sbjct: 421 EVIRLFEKLKKTKDVKPDNITFLYILPSCSDNQVPLEATMQCFKSMVEDYGIKPTIEHCC 480

Query: 481 TMVRLMGQRGDVYGSKRLIHELGFDSSGPVWRALLGACGVLRDLKLAKVAAAKVIVFGAA 540
           TMVRLMGQRGDV+GSKRLIHELGFDSSG VWRALLGACGVLRDLKLAKVAAAKVIV GAA
Sbjct: 481 TMVRLMGQRGDVHGSKRLIHELGFDSSGSVWRALLGACGVLRDLKLAKVAAAKVIVLGAA 540

Query: 541 DDYVYVMMSNIFASHGKWRDVKLVRELMRNKGVRKETGYSWLIEMENEFVLS 593
           DDYVYVMMSNIFASHGKWRDVKLVRELM  KG RKETGYSWLIEMENE  LS
Sbjct: 541 DDYVYVMMSNIFASHGKWRDVKLVRELMSKKGFRKETGYSWLIEMENEIFLS 592

[Close]

BLAST of CSPI03G02610 vs. NCBI nr
Match: XP_008448839.1 (PREDICTED: putative pentatricopeptide repeat-containing protein At5g47460 [Cucumis melo])

HSP 1 Score: 1131.7 bits (2926), Expect = 0.0e+00
Identity = 562/592 (94.93%), Postives = 573/592 (96.79%), Query Frame = 0


Query: 1   MQRPFSTKLVLKPLLQKPSAIISIHNASNFQPCFSIDDQAPSTAIRTALAGGGHTADLAL 60
           MQRPFSTKLVLKPLLQKPSAIISIHNASNFQPCFS+DDQAPSTA+RTALAGGGHTA+LAL
Sbjct: 1   MQRPFSTKLVLKPLLQKPSAIISIHNASNFQPCFSVDDQAPSTALRTALAGGGHTAELAL 60

Query: 61  AEAFRALKCNPNGYALVQLVRACTSHALDSCGHQLHSYILRSGFASNVFVGTAMVNFYIK 120
           AEAFRALKCNPNGYALVQLVRACTSHA DSCGHQLHSYILRSGFASNVFVGTAMVNFYIK
Sbjct: 61  AEAFRALKCNPNGYALVQLVRACTSHAWDSCGHQLHSYILRSGFASNVFVGTAMVNFYIK 120

Query: 121 TESFDSAHKLFDEMPQPSLVTWNSLISGYVHCGQFRKALCLFIQLDGSGNLVDSYSSSIA 180
           TESFDSAHKLFDEMPQPSLVTWNSLISGYV CGQFRKALCLFIQLDGS NLVDSYS SIA
Sbjct: 121 TESFDSAHKLFDEMPQPSLVTWNSLISGYVRCGQFRKALCLFIQLDGSENLVDSYSLSIA 180

Query: 181 LSASGHLGWLILGQSIHSKVVKLGLEDSTVVANCLIDMYGKCESFEGAVEVFNDMIGKDT 240
           LSASGHLGWLILGQSIHSKVVKLGLED+TVVANCLIDMYGKCESFEGAVEVFNDMIGKDT
Sbjct: 181 LSASGHLGWLILGQSIHSKVVKLGLEDNTVVANCLIDMYGKCESFEGAVEVFNDMIGKDT 240

Query: 241 ISWNSVIAASARNGRLEQASRYLQQMPRPDTISFNELINGYAQFGDIEYAVEILSKMDSP 300
           ISWNSVIAASARN RLEQASRYLQ MPRPDTISFNELINGYAQFGDIEYAVEILSKMDSP
Sbjct: 241 ISWNSVIAASARNRRLEQASRYLQLMPRPDTISFNELINGYAQFGDIEYAVEILSKMDSP 300

Query: 301 NSSSWNAVLTGYVDRDETWEALSFFTKMHSCDVRMDQFTFSSILSGVAGLSALKWGLAIH 360
           NSSSWNAVLTGYVDRDETW+ALSFFTKMHSCDV MDQFTFSSILSGVAGLSAL+WGLAIH
Sbjct: 301 NSSSWNAVLTGYVDRDETWKALSFFTKMHSCDVGMDQFTFSSILSGVAGLSALEWGLAIH 360

Query: 361 CCITKCGLDTSTVVGSALISMYSKCGHVNYAEMIFQSLPKKNLVSWNAMISGLAHNGKTM 420
           CCITKCGLDTSTVVGSALI+MYSKCGHVN AE+IFQSLPKKNLVSWNAMISGLAHNGKTM
Sbjct: 361 CCITKCGLDTSTVVGSALINMYSKCGHVNSAEIIFQSLPKKNLVSWNAMISGLAHNGKTM 420

Query: 421 EVIHLFEKLKKTKDVKPDNITFLNILLSCSDNQVPLEATMQYYKSMVEDYGIKPTIEHCC 480
           EVI LFEKLKKTKDVKPDNITFL IL SCSDNQVPLEATMQ +KSMVEDYGIKPTIEHCC
Sbjct: 421 EVIRLFEKLKKTKDVKPDNITFLYILPSCSDNQVPLEATMQCFKSMVEDYGIKPTIEHCC 480

Query: 481 TMVRLMGQRGDVYGSKRLIHELGFDSSGPVWRALLGACGVLRDLKLAKVAAAKVIVFGAA 540
           TMVRLMGQRGDV+GSKRLIHELGFDSSG VWRALLGACGVLRDLKLAKVAAAKVIV GAA
Sbjct: 481 TMVRLMGQRGDVHGSKRLIHELGFDSSGSVWRALLGACGVLRDLKLAKVAAAKVIVLGAA 540

Query: 541 DDYVYVMMSNIFASHGKWRDVKLVRELMRNKGVRKETGYSWLIEMENEFVLS 593
           DDYVYVM+SNIFASHGKWRDVKLVRELM  KG RKETGYSWLIEMENE  LS
Sbjct: 541 DDYVYVMLSNIFASHGKWRDVKLVRELMSKKGFRKETGYSWLIEMENEIFLS 592

[Close]

BLAST of CSPI03G02610 vs. NCBI nr
Match: XP_038905285.1 (putative pentatricopeptide repeat-containing protein At5g47460 [Benincasa hispida])

HSP 1 Score: 1041.6 bits (2692), Expect = 2.6e-300
Identity = 517/593 (87.18%), Postives = 545/593 (91.91%), Query Frame = 0


Query: 1   MQRPFSTKLVL-----KPLLQKPSAIISIHNASNFQPCFSIDDQAPSTAIRTALAGGGHT 60
           MQRPFS+KL+L      PLLQK    ISIH+ASNFQPCFSID QAP T++RTALAGGG T
Sbjct: 1   MQRPFSSKLLLYLQTQNPLLQKSVTTISIHDASNFQPCFSIDYQAPWTSLRTALAGGGRT 60

Query: 61  ADLALAEAFRALKCNPNGYALVQLVRACTSHALDSCGHQLHSYILRSGFASNVFVGTAMV 120
           A+LAL +AF+ALKCNPNGY LVQLVRACTSHA DSCGHQLH YILRSGFASNVFVGTAMV
Sbjct: 61  AELALTKAFQALKCNPNGYVLVQLVRACTSHAWDSCGHQLHCYILRSGFASNVFVGTAMV 120

Query: 121 NFYIKTESFDSAHKLFDEMPQPSLVTWNSLISGYVHCGQFRKALCLFIQLDGSGNLVDSY 180
           NFYIK+ESFDSAHK+FDEMPQPSLV+WNSLISG+VHCGQFRKAL LFIQLDGS NLVDSY
Sbjct: 121 NFYIKSESFDSAHKVFDEMPQPSLVSWNSLISGFVHCGQFRKALSLFIQLDGSENLVDSY 180

Query: 181 SSSIALSASGHLGWLILGQSIHSKVVKLGLEDSTVVANCLIDMYGKCESFEGAVEVFNDM 240
           S S ALSAS  LGWL LGQSIHSKVVKLG+ D+T+VANCLIDMYGKCESFE AV+VFN++
Sbjct: 181 SLSTALSASSQLGWLKLGQSIHSKVVKLGVADNTIVANCLIDMYGKCESFEEAVKVFNEI 240

Query: 241 IGKDTISWNSVIAASARNGRLEQASRYLQQMPRPDTISFNELINGYAQFGDIEYAVEILS 300
           I KD ISWNSVIAASARNGRLEQASRYL+QMP+PDTIS+NELINGYAQFG+IE AVEILS
Sbjct: 241 IDKDVISWNSVIAASARNGRLEQASRYLRQMPQPDTISYNELINGYAQFGEIEVAVEILS 300

Query: 301 KMDSPNSSSWNAVLTGYVDRDETWEALSFFTKMHSCDVRMDQFTFSSILSGVAGLSALKW 360
           KMDSPNSSSWNAVLTGYVDRDE W+ALSFFTKMH  DV MDQFTFSSILSGVAGLSALKW
Sbjct: 301 KMDSPNSSSWNAVLTGYVDRDEAWKALSFFTKMHLWDVGMDQFTFSSILSGVAGLSALKW 360

Query: 361 GLAIHCCITKCGLDTSTVVGSALISMYSKCGHVNYAEMIFQSLPKKNLVSWNAMISGLAH 420
           GLAIHCCITKCGL  STVVGSALI MYSKCGHVNYAEMIFQSLPKKNLVSWNAMISGLAH
Sbjct: 361 GLAIHCCITKCGLGKSTVVGSALIDMYSKCGHVNYAEMIFQSLPKKNLVSWNAMISGLAH 420

Query: 421 NGKTMEVIHLFEKLKKTKDVKPDNITFLNILLSCSDNQVPLEATMQYYKSMVEDYGIKPT 480
           NGKTMEVIHLFEKLKK KDVKPDNITFLNILLSCSDNQ+PLEATMQY+KSMVEDYGIKPT
Sbjct: 421 NGKTMEVIHLFEKLKKMKDVKPDNITFLNILLSCSDNQLPLEATMQYFKSMVEDYGIKPT 480

Query: 481 IEHCCTMVRLMGQRGDVYGSKRLIHELGFDSSGPVWRALLGACGVLRDLKLAKVAAAKVI 540
           IEHCCTMVRLMGQRGDVY SKRLIHELGFD+SG VWRA LG CG  RDLKLAKVAAAKV 
Sbjct: 481 IEHCCTMVRLMGQRGDVYRSKRLIHELGFDTSGSVWRAFLGVCGASRDLKLAKVAAAKVT 540

Query: 541 VFGAADDYVYVMMSNIFASHGKWRDVKLVRELMRNKGVRKETGYSWLIEMENE 589
           V GAADDYV+VMMSNI ASHGKWRDVKL+RELMR  GVRKETGYSWLIEMENE
Sbjct: 541 VLGAADDYVHVMMSNICASHGKWRDVKLIRELMRKNGVRKETGYSWLIEMENE 593

[Close]

BLAST of CSPI03G02610 vs. NCBI nr
Match: XP_023007751.1 (putative pentatricopeptide repeat-containing protein At5g47460 [Cucurbita maxima])

HSP 1 Score: 1013.8 bits (2620), Expect = 5.9e-292
Identity = 503/593 (84.82%), Postives = 539/593 (90.89%), Query Frame = 0


Query: 1   MQRPFSTKLVL-----KPLLQKPSAIISIHNASNFQPCFSIDDQAPSTAIRTALAGGGHT 60
           MQ+PF TKL L     KPLLQK +A ISI NA NFQPCFS + Q P T+ R  LAGGG T
Sbjct: 1   MQKPFYTKLQLYLQTQKPLLQKSAATISIQNACNFQPCFSTNYQDPWTSFRMVLAGGGRT 60

Query: 61  ADLALAEAFRALKCNPNGYALVQLVRACTSHALDSCGHQLHSYILRSGFASNVFVGTAMV 120
           A+LALAEAF+ALKCNPNGYALVQLVRACT+HA DSCGHQLHSYILRSGFASNVFVGTAMV
Sbjct: 61  AELALAEAFQALKCNPNGYALVQLVRACTTHAWDSCGHQLHSYILRSGFASNVFVGTAMV 120

Query: 121 NFYIKTESFDSAHKLFDEMPQPSLVTWNSLISGYVHCGQFRKALCLFIQLDGSGNLVDSY 180
           NFY+K+ESFDSAHK+FDEMPQP+LV+WNSLISGYVHCGQFR AL  FI LDGS NLVDSY
Sbjct: 121 NFYVKSESFDSAHKVFDEMPQPNLVSWNSLISGYVHCGQFRNALSSFIALDGSENLVDSY 180

Query: 181 SSSIALSASGHLGWLILGQSIHSKVVKLGLEDSTVVANCLIDMYGKCESFEGAVEVFNDM 240
           S S AL+ASG LGWLILGQSIHSKVVKLGLE++T+VANCLID YGKCESFE AV+VFNDM
Sbjct: 181 SLSAALNASGQLGWLILGQSIHSKVVKLGLENNTIVANCLIDTYGKCESFEEAVKVFNDM 240

Query: 241 IGKDTISWNSVIAASARNGRLEQASRYLQQMPRPDTISFNELINGYAQFGDIEYAVEILS 300
           I KDTISWNSVIAASARNGRLEQASRYL+QMPRPDTIS+NELING AQFGDIE AVEILS
Sbjct: 241 IDKDTISWNSVIAASARNGRLEQASRYLRQMPRPDTISYNELINGCAQFGDIEEAVEILS 300

Query: 301 KMDSPNSSSWNAVLTGYVDRDETWEALSFFTKMHSCDVRMDQFTFSSILSGVAGLSALKW 360
            MDSPNSSSWNAVLTGYVDRDE W+ALSFFTKMHSC++ MDQFTFSSILSGVAGLSAL W
Sbjct: 301 TMDSPNSSSWNAVLTGYVDRDEAWKALSFFTKMHSCNIGMDQFTFSSILSGVAGLSALTW 360

Query: 361 GLAIHCCITKCGLDTSTVVGSALISMYSKCGHVNYAEMIFQSLPKKNLVSWNAMISGLAH 420
           G +IHCCITK GLDTSTVVGSALI MYSKCGHVNYAEMIFQSLPKKNLVSWNAMISGLA 
Sbjct: 361 GSSIHCCITKRGLDTSTVVGSALIDMYSKCGHVNYAEMIFQSLPKKNLVSWNAMISGLAR 420

Query: 421 NGKTMEVIHLFEKLKKTKDVKPDNITFLNILLSCSDNQVPLEATMQYYKSMVEDYGIKPT 480
           NGKTMEVIHLFEKLK  KDV PD+ITFL+ILLSCSDNQVPLE TMQY+KSM+ED+GI+PT
Sbjct: 421 NGKTMEVIHLFEKLKTMKDVTPDSITFLSILLSCSDNQVPLETTMQYFKSMIEDFGIEPT 480

Query: 481 IEHCCTMVRLMGQRGDVYGSKRLIHELGFDSSGPVWRALLGACGVLRDLKLAKVAAAKVI 540
           +EHCCTMVRLMGQRGDVY SK+LIHELGFDS+G VWRALLGAC + +DLKLAKVAAAKVI
Sbjct: 481 VEHCCTMVRLMGQRGDVYRSKKLIHELGFDSNGSVWRALLGACALWKDLKLAKVAAAKVI 540

Query: 541 VFGAADDYVYVMMSNIFASHGKWRDVKLVRELMRNKGVRKETGYSWLIEMENE 589
             GAADDYV+VMMSNI ASHGKWRDV+ VRELMR KGVRKETGYSWLIEMENE
Sbjct: 541 ELGAADDYVHVMMSNILASHGKWRDVREVRELMRKKGVRKETGYSWLIEMENE 593

[Close]

BLAST of CSPI03G02610 vs. TAIR 10
Match: AT5G47460.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 538.1 bits (1385), Expect = 8.9e-153
Identity = 251/515 (48.74%), Postives = 358/515 (69.51%), Query Frame = 0


Query: 71  PNGYALVQLVRACTSHALDSCGHQLHSYILRSGFASNVFVGTAMVNFYIKTESFDSAHKL 130
           P+   LV L+R   ++   S   QLH Y+ + GF SN  +  +++ FY  ++S + AHK+
Sbjct: 53  PDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKV 112

Query: 131 FDEMPQPSLVTWNSLISGYVHCGQFRKALCLFIQLDGSGNLVDSYSSSIALSASGHLGWL 190
           FDEMP P +++WNSL+SGYV  G+F++ +CLF++L  S    + +S + AL+A   L   
Sbjct: 113 FDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLS 172

Query: 191 ILGQSIHSKVVKLGLE-DSTVVANCLIDMYGKCESFEGAVEVFNDMIGKDTISWNSVIAA 250
            LG  IHSK+VKLGLE  + VV NCLIDMYGKC   + AV VF  M  KDT+SWN+++A+
Sbjct: 173 PLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVAS 232

Query: 251 SARNGRLEQASRYLQQMPRPDTISFNELINGYAQFGDIEYAVEILSKMDSPNSSSWNAVL 310
            +RNG+LE    +  QMP PDT+++NELI+ + + GD   A ++LS M +PNSSSWN +L
Sbjct: 233 CSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTIL 292

Query: 311 TGYVDRDETWEALSFFTKMHSCDVRMDQFTFSSILSGVAGLSALKWGLAIHCCITKCGLD 370
           TGYV+ +++ EA  FFTKMHS  VR D+++ S +L+ VA L+ + WG  IH C  K GLD
Sbjct: 293 TGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLD 352

Query: 371 TSTVVGSALISMYSKCGHVNYAEMIFQSLPKKNLVSWNAMISGLAHNGKTMEVIHLFEKL 430
           +  VV SALI MYSKCG + +AE++F ++P+KNL+ WN MISG A NG ++E I LF +L
Sbjct: 353 SRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQL 412

Query: 431 KKTKDVKPDNITFLNILLSCSDNQVPLEATMQYYKSMVEDYGIKPTIEHCCTMVRLMGQR 490
           K+ + +KPD  TFLN+L  CS  +VP+E  + Y++ M+ +Y IKP++EHCC+++R MGQR
Sbjct: 413 KQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQR 472

Query: 491 GDVYGSKRLIHELGFDSSGPVWRALLGACGVLRDLKLAKVAAAKVIVFGAA--DDYVYVM 550
           G+V+ +K++I E GF   G  WRALLGAC   +DLK AK  AAK+I  G A  D+Y+Y++
Sbjct: 473 GEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIV 532

Query: 551 MSNIFASHGKWRDVKLVRELMRNKGVRKETGYSWL 583
           MSN++A H +WR+V  +R++MR  GV KE G SW+
Sbjct: 533 MSNLYAYHERWREVGQIRKIMRESGVLKEVGSSWI 567

[Close]

BLAST of CSPI03G02610 vs. TAIR 10
Match: AT3G02330.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 285.8 bits (730), Expect = 7.9e-77
Identity = 176/569 (30.93%), Postives = 297/569 (52.20%), Query Frame = 0


Query: 79  LVRACTSHALDSCGHQLHSYILRSGFASNVFVGTAMVNFYIKTESFDSAHKLFDEMPQPS 138
           ++R+C + +    G QLH++ L+S FA++  V TA ++ Y K ++   A  LFD     +
Sbjct: 287 VLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLN 346

Query: 139 LVTWNSLISGYVHCGQFRKALCLFIQLDGSGNLVDSYSSSIALSASGHLGWLILGQSIHS 198
             ++N++I+GY       KAL LF +L  SG   D  S S    A   +  L  G  I+ 
Sbjct: 347 RQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYG 406

Query: 199 KVVKLGLEDSTVVANCLIDMYGKCESFEGAVEVFNDMIGKDTISWNSVIAASARNGRLEQ 258
             +K  L     VAN  IDMYGKC++   A  VF++M  +D +SWN++IAA  +NG+  +
Sbjct: 407 LAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYE 466

Query: 259 ASRYLQQMPR----PDTISFN----------------------------------ELING 318
                  M R    PD  +F                                    LI+ 
Sbjct: 467 TLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDM 526

Query: 319 YAQFGDIEYA----------------VEILSKMDSPNSS----SWNAVLTGYVDRDETWE 378
           Y++ G IE A                +E L KM +        SWN++++GYV ++++ +
Sbjct: 527 YSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSED 586

Query: 379 ALSFFTKMHSCDVRMDQFTFSSILSGVAGLSALKWGLAIHCCITKCGLDTSTVVGSALIS 438
           A   FT+M    +  D+FT++++L   A L++   G  IH  + K  L +   + S L+ 
Sbjct: 587 AQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVD 646

Query: 439 MYSKCGHVNYAEMIFQSLPKKNLVSWNAMISGLAHNGKTMEVIHLFEKLKKTKDVKPDNI 498
           MYSKCG ++ + ++F+   +++ V+WNAMI G AH+GK  E I LFE++   +++KP+++
Sbjct: 647 MYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERM-ILENIKPNHV 706

Query: 499 TFLNILLSCSDNQVPLEATMQYYKSMVEDYGIKPTIEHCCTMVRLMGQRGDVYGSKRLIH 558
           TF++IL +C+   + ++  ++Y+  M  DYG+ P + H   MV ++G+ G V  +  LI 
Sbjct: 707 TFISILRACAHMGL-IDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIR 766

Query: 559 ELGFDSSGPVWRALLGACGVLR-DLKLAKVAAAKVIVFGAADDYVYVMMSNIFASHGKWR 589
           E+ F++   +WR LLG C + R ++++A+ A A ++     D   Y ++SN++A  G W 
Sbjct: 767 EMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWE 826

[Close]

BLAST of CSPI03G02610 vs. TAIR 10
Match: AT5G27110.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 282.3 bits (721), Expect = 8.8e-76
Identity = 168/560 (30.00%), Postives = 289/560 (51.61%), Query Frame = 0


Query: 69  CNPNGYALVQLVRACTSHALDSCGHQLHSYILRSGFASNVFVGTAMVNFYIKTESFDSAH 128
           C P+ +    +++A  +   +  G  +H+ +++SG+  +V V +++V  Y K   F+++ 
Sbjct: 103 CVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSL 162

Query: 129 KLFDEMPQPSLVTWNSLISGYVHCGQFRKALCLFIQLDGSGNLVDSYSSSIALSASGHLG 188
           ++FDEMP+  + +WN++IS +   G+  KAL LF +++ SG   +S S ++A+SA   L 
Sbjct: 163 QVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLL 222

Query: 189 WLILGQSIHSKVVKLGLEDSTVVANCLIDMYGKCESFEGAVEVFNDMIGKDTISWNSVIA 248
           WL  G+ IH K VK G E    V + L+DMYGKC+  E A EVF  M  K  ++WNS+I 
Sbjct: 223 WLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIK 282

Query: 249 ASARNGRLEQASRYLQQM----PRPDTISFN----------------------------- 308
                G  +     L +M     RP   +                               
Sbjct: 283 GYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNA 342

Query: 309 ------ELINGYAQFGDIEYAVEILSKMDSPNSSSWNAVLTGYVDRDETWEALSFFTKMH 368
                  LI+ Y + G+   A  + SK     + SWN +++ Y+     ++A+  + +M 
Sbjct: 343 DIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMV 402

Query: 369 SCDVRMDQFTFSSILSGVAGLSALKWGLAIHCCITKCGLDTSTVVGSALISMYSKCGHVN 428
           S  V+ D  TF+S+L   + L+AL+ G  IH  I++  L+T  ++ SAL+ MYSKCG+  
Sbjct: 403 SVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEK 462

Query: 429 YAEMIFQSLPKKNLVSWNAMISGLAHNGKTMEVIHLFEKLKKTKDVKPDNITFLNILLSC 488
            A  IF S+PKK++VSW  MIS    +G+  E ++ F++++K   +KPD +T L +L +C
Sbjct: 463 EAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKF-GLKPDGVTLLAVLSAC 522

Query: 489 SDNQVPLEATMQYYKSMVEDYGIKPTIEHCCTMVRLMGQRGDVYGSKRLIHELGFDS-SG 548
               + ++  ++++  M   YGI+P IEH   M+ ++G+ G +  +  +I +    S + 
Sbjct: 523 GHAGL-IDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNA 582

Query: 549 PVWRALLGACGVLRDLKLAKVAAAKVIVFGAADDYVYVMMSNIFASHGKWRDVKLVRELM 589
            +   L  AC +  +  L    A  ++     D   Y+++ N++AS   W   + VR  M
Sbjct: 583 ELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKM 642

[Close]

BLAST of CSPI03G02610 vs. TAIR 10
Match: AT2G13600.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 280.0 bits (715), Expect = 4.3e-75
Identity = 166/518 (32.05%), Postives = 270/518 (52.12%), Query Frame = 0


Query: 72  NGYALVQLVRACTSHALDSCGHQLHSYILRSGFASNVFVGTAMVNFYIKTESFDSAHKLF 131
           N Y+   ++ AC+     + G Q+HS I +S F S+V++G+A+V+ Y K  + + A ++F
Sbjct: 151 NEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVF 210

Query: 132 DEMPQPSLVTWNSLISGYVHCGQFRKALCLFIQLDGSGNLVDSYSSSIALSASGHLGWLI 191
           DEM   ++V+WNSLI+ +   G   +AL +F  +  S    D  + +  +SA   L  + 
Sbjct: 211 DEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIK 270

Query: 192 LGQSIHSKVVKLG-LEDSTVVANCLIDMYGKCESFEGAVEVFNDMIGKDTISWNSVIAAS 251
           +GQ +H +VVK   L +  +++N  +DMY KC                            
Sbjct: 271 VGQEVHGRVVKNDKLRNDIILSNAFVDMYAKC---------------------------- 330

Query: 252 ARNGRLEQASRYLQQMPRPDTISFNELINGYAQFGDIEYAVEILSKMDSPNSSSWNAVLT 311
               R+++A      MP  + I+   +I+GYA     + A  + +KM   N  SWNA++ 
Sbjct: 331 ---SRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIA 390

Query: 312 GYVDRDETWEALSFFTKMHSCDVRMDQFTFSSILSGVAGLSALKWGLAIHCCITKCGL-- 371
           GY    E  EALS F  +    V    ++F++IL   A L+ L  G+  H  + K G   
Sbjct: 391 GYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKF 450

Query: 372 ----DTSTVVGSALISMYSKCGHVNYAEMIFQSLPKKNLVSWNAMISGLAHNGKTMEVIH 431
               +    VG++LI MY KCG V    ++F+ + +++ VSWNAMI G A NG   E + 
Sbjct: 451 QSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALE 510

Query: 432 LFEKLKKTKDVKPDNITFLNILLSCSDNQVPLEATMQYYKSMVEDYGIKPTIEHCCTMVR 491
           LF ++ ++ + KPD+IT + +L +C      +E    Y+ SM  D+G+ P  +H   MV 
Sbjct: 511 LFREMLESGE-KPDHITMIGVLSACGHAGF-VEEGRHYFSSMTRDFGVAPLRDHYTCMVD 570

Query: 492 LMGQRGDVYGSKRLIHELGFDSSGPVWRALLGACGVLRDLKLAKVAAAKVIVFGAADDYV 551
           L+G+ G +  +K +I E+       +W +LL AC V R++ L K  A K++    ++   
Sbjct: 571 LLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGP 630

Query: 552 YVMMSNIFASHGKWRDVKLVRELMRNKGVRKETGYSWL 583
           YV++SN++A  GKW DV  VR+ MR +GV K+ G SW+
Sbjct: 631 YVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWI 635

[Close]

BLAST of CSPI03G02610 vs. TAIR 10
Match: AT5G09950.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 278.1 bits (710), Expect = 1.7e-74
Identity = 164/535 (30.65%), Postives = 284/535 (53.08%), Query Frame = 0


Query: 92  GHQLHSYILRSGFAS-NVFVGTAMVNFYIKTESFDSAHKLFDEMPQPSLVTWNSLISGYV 151
           G ++H +++ +G     V +G  +VN Y K  S   A ++F  M     V+WNS+I+G  
Sbjct: 332 GREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLD 391

Query: 152 HCGQFRKALCLFIQLDGSGNLVDSYSSSIALSASGHLGWLILGQSIHSKVVKLGLEDSTV 211
             G F +A+  +  +     L  S++   +LS+   L W  LGQ IH + +KLG++ +  
Sbjct: 392 QNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVS 451

Query: 212 VANCLIDMYGKCESFEGAVEVFNDMIGKDTISWNSVIAASARNGR--------LEQASRY 271
           V+N L+ +Y +        ++F+ M   D +SWNS+I A AR+ R           A R 
Sbjct: 452 VSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRA 511

Query: 272 LQQMPR---------PDTISFNEL---ING--------------------YAQFGDIEYA 331
            Q++ R           ++SF EL   I+G                    Y + G+++  
Sbjct: 512 GQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGC 571

Query: 332 VEILSKM-DSPNSSSWNAVLTGYVDRDETWEALSFFTKMHSCDVRMDQFTFSSILSGVAG 391
            +I S+M +  ++ +WN++++GY+  +   +AL     M     R+D F ++++LS  A 
Sbjct: 572 EKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFAS 631

Query: 392 LSALKWGLAIHCCITKCGLDTSTVVGSALISMYSKCGHVNYAEMIFQSLPKKNLVSWNAM 451
           ++ L+ G+ +H C  +  L++  VVGSAL+ MYSKCG ++YA   F ++P +N  SWN+M
Sbjct: 632 VATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSM 691

Query: 452 ISGLAHNGKTMEVIHLFEKLKKTKDVKPDNITFLNILLSCSDNQVPLEATMQYYKSMVED 511
           ISG A +G+  E + LFE +K      PD++TF+ +L +CS   + LE   ++++SM + 
Sbjct: 692 ISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGL-LEEGFKHFESMSDS 751

Query: 512 YGIKPTIEHCCTMVRLMGQRGDVYGSKRLIHELGFDSSGPVWRALLGAC--GVLRDLKLA 571
           YG+ P IEH   M  ++G+ G++   +  I ++    +  +WR +LGAC     R  +L 
Sbjct: 752 YGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELG 811

Query: 572 KVAAAKVIVFGAADDYVYVMMSNIFASHGKWRDVKLVRELMRNKGVRKETGYSWL 583
           K AA  +      +   YV++ N++A+ G+W D+   R+ M++  V+KE GYSW+
Sbjct: 812 KKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWV 865

The following BLAST results are available for this feature:

BLAST of CSPI03G02610 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FGL1	1.2e-151	48.74	Putative pentatricopeptide repeat-containing protein At5g47460 OS=Arabidopsis th...	[more]
Q9FWA6	1.1e-75	30.93	Pentatricopeptide repeat-containing protein At3g02330, mitochondrial OS=Arabidop...	[more]
O04659	1.2e-74	30.00	Pentatricopeptide repeat-containing protein At5g27110 OS=Arabidopsis thaliana OX...	[more]
Q9SIT7	6.1e-74	32.05	Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX...	[more]
Q9FIB2	2.3e-73	30.65	Putative pentatricopeptide repeat-containing protein At5g09950 OS=Arabidopsis th...	[more]

BLAST of CSPI03G02610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6U8	0.0e+00	99.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G019960 PE=4 SV=1	[more]
A0A5D3CKT8	0.0e+00	95.10	Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa...	[more]
A0A1S3BK19	0.0e+00	94.93	putative pentatricopeptide repeat-containing protein At5g47460 OS=Cucumis melo O...	[more]
A0A6J1L1J5	2.9e-292	84.82	putative pentatricopeptide repeat-containing protein At5g47460 OS=Cucurbita maxi...	[more]
A0A6J1E9S2	9.5e-288	84.15	putative pentatricopeptide repeat-containing protein At5g47460 OS=Cucurbita mosc...	[more]

BLAST of CSPI03G02610 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147255.2	0.0e+00	99.33	putative pentatricopeptide repeat-containing protein At5g47460 [Cucumis sativus]	[more]
KAA0041078.1	0.0e+00	95.10	putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] ...	[more]
XP_008448839.1	0.0e+00	94.93	PREDICTED: putative pentatricopeptide repeat-containing protein At5g47460 [Cucum...	[more]
XP_038905285.1	2.6e-300	87.18	putative pentatricopeptide repeat-containing protein At5g47460 [Benincasa hispid...	[more]
XP_023007751.1	5.9e-292	84.82	putative pentatricopeptide repeat-containing protein At5g47460 [Cucurbita maxima...	[more]

BLAST of CSPI03G02610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G47460.1	8.9e-153	48.74	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G02330.1	7.9e-77	30.93	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G27110.1	8.8e-76	30.00	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G13600.1	4.3e-75	32.05	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G09950.1	1.7e-74	30.65	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 45..191 e-value: 8.4E-21 score: 76.6
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 266..354 e-value: 8.3E-19 score: 69.6 coord: 192..265 e-value: 7.1E-14 score: 53.5 coord: 454..585 e-value: 7.1E-6 score: 27.5 coord: 355..453 e-value: 7.2E-18 score: 66.6
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 300..348 e-value: 1.1E-7 score: 31.9 coord: 401..445 e-value: 2.6E-9 score: 37.1
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 212..238 e-value: 1.9E-4 score: 19.4 coord: 404..438 e-value: 1.3E-5 score: 23.1 coord: 140..165 e-value: 2.4E-5 score: 22.2
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 140..169 e-value: 1.7E-6 score: 27.9 coord: 112..135 e-value: 0.3 score: 11.4 coord: 241..267 e-value: 0.0019 score: 18.3 coord: 211..238 e-value: 3.3E-4 score: 20.7 coord: 272..298 e-value: 8.5E-4 score: 19.4
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 239..269 score: 9.086975
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 138..172 score: 9.799459
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 270..304 score: 9.503505
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 402..437 score: 9.613118
None	No IPR available	PANTHER	PTHR47928:SF110	PPR CONTAINING PLANT-LIKE PROTEIN	coord: 59..583
None	No IPR available	PANTHER	PTHR47928	REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED	coord: 59..583

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G02610.1	CSPI03G02610.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1900865	chloroplast RNA modification
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0005515	protein binding