CSPI03G01000 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G01000
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	ATP-dependent Clp protease proteolytic subunit
Location	Chr3: 697401 .. 700934 (+)
RNA-Seq Expression	CSPI03G01000
Synteny	CSPI03G01000

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGATTATTGAGATTTACAAATTTCCCATAACTTTTGCAATTTATATTTCTTACCCAACCAAATCCCCAAAGTAATCGTCTCTCCACTTCTTCCTCCGTTTGACAAGTGAAGCAGAGCAGTGGCGTAAATCCATGGAGCTTCTTTCACGCTGTTCAACTCTCACTCCTCACGCCTCCTCTCTCGGCCTTCCCAATTCTCATGGAAAACCATCTAATTTCTTCCCCAAGCTCAAATCCACTCTCTCTTTTCCTTCGGCTTCATCAGTACTCAAAACAACCGCTCTTAAACCCTCCAGAACCCTACCTCCGCCGTGCTTCGTTATGACGGCTCCTCAGACGCCGGATGCCGCCCGGAGAGGCGCTGAAACTGACGCCATGGGATTGCTTCTCAGGGAGAGGATCGTCTTCTTGGGGAACAGCATTGATGATTTTGTAGCTGATGCTATTATCAGTCAGCTCTTACTCTTGGATGCCAAGGACTCTACTAAAGATATTAGACTCTTCATTAATTCCGCTGGCGGCTCTCTCAGGTATTCATGAGCTGATTTTTCGTGCATAACGCAGTAGATATGGAATATGTGATTTAGGCTTGTTTTTGTTCTTCCCAGACGATTTAGGTAACTTGATTTCTACGAATATGCGTTTTTTTGCCTAATTTTGTCGAGATTTTTCTTCACCTGCATCACAAACAGTTAGCCCACTATTTGGTGCATTCATTCATGTGATGACTCTCGTTCTAGAGTTGACATTAATAAACAACCAGCTAAAATAATGCTTAACCATTATCGAATAGATGGAAAAGAATCAGGTAAATCTTTGTAGAGATGCATTTTGTTTGAAGTTTGAAACCTTTGGCTCGTATCCACTTGCAAATCTTCTAACCTCCAGCTGAATAATATAAAAGGCAGATTGGAAGAACCCTTTTTATCTTCGGTTTCGGGAGGAAAAGACTTAGTTCTTCATTTGGACTATGGCTCACAAGAGGCTAAACACTTGTTGGATTAAAAAGAAGAACCCATCCATGGCCTTATCTCCGCCTGTTTGCTCTTCTAATCTAATGAAGAAACGCTCGACCATCTTTTATTTTATTGGGAATATGTTGCACAGAAGATTCACTTGCCATTTTATTTGTCTTGGGCTGGAAACAATTCTACTGATGAAATGAGATGATACATAAAGGTAAACTCATTCAAAAAATTTATCCAGTTGGATATAAAAGAATTTAAGCTGCATATATTAGAAGTATCCATACTTCAAGTAGGAAGCTTTATTTTTTAAAAAAAATTATTGAGTTCTTTTCATTCTAAATCTTCCAAATAACTGCCTTCAACCAATGGGTATTCTATGTTGACCTGAACGGATGATCTATCAGCTGCAAATTTAGCCAATAAAAAATCCCATTTTCTATAAGGGCCAATTTCTCAAATCAGTACTTCTTTGGGAAAGTGCCAACTCCTCCTTCTATGAGAGTAAGCATGTAGACCTAATCAAAGTTCTTTTGAACAAGTAAAAATCCAGGCCTTCTTGTTCATTCTCTATGAGATTCTCAGTGGAGGTGGTGGAAGTTGAAGATACCAAAGGTTCCCTAATTACTACAGTATGGTAGTAATGCATCTATCATCGTTTACCCGTCTCTCCCTTTTCATTTATGGTAAATTTTGAATAACTTGATAAGGGTTGTGAAAAAGAACTGAATTCAGAATGTATGTTGTCAAAATGTCTCATATTATTGTCTATTTGTATCATGTTTTTCTTTGCATTTTTTAACACTTAGTCCTCACAGTATAAACTTATAATGAAATCATGTAATCTATATATGTAATATGCAACCAATCTAATTTTATGCATTGGAAACATTCTAGAGTAATTTAATTTAGATTTCTGTGCTTTTTGGATGACCTTTTGATTATCTTCTCTTCGCATCTTTGATGTGCAGCCACTTTCTTTTCTAATGATAAATCTATCATGCACTACAAAACCATAATTGTTCTAAATGTATACTGAAATGTAACTTAAGGATGCCCGTGAGACTTAAGAGTTGACAACTGAAGAAATTATGTGCTTTGCCTAACTCAGTTCATTTTTCAGAAAATGTTATGTTTTTCAGTTCCACAACCACTTATCCTCGTGTTGATAAGGAAAACACCTTCCAACTTTCTCATATCTCAAACCCAGTTTTTCAATTGTCTATCAAACAGTACCTTCTCAGCCCATTGCCCCACAATTTCGTGCGTGTCAAGCAATCACTTACAATCTCTCCTTTTGTACTAGCAATGGAGTAGATATTGTGAAACACCTAACTCAAAGATGGAATTAAACCAGCTATCTTCCTAGATTCTAAGCTCATTTCCCATTTTATAAAGAAAACCCTGTTCCGACGAACCCATTCATCTAGCTAAATTGGGCCAAGGGCAAAACACAGATTTGCTTAAATGGTTTTATTTGTTTTTTGTATAGCAGAACTTAAAATTTTAGAAGCGGGAGTGTCATATTCACGACTTGTGAATATATGAATCCTCTTGTTATTTGAAGCCTGAATTATTGATTACTAGGCTTTTTAAATAAATAAGTATATTTTGTCTTCCCCTCTCGGTCTTGAGAATTTAGATTAAGAGGACAATCAGTGGTACCTGATCTCATCTAGTTTTGCATCATGTTCTTCGTCACTTTGAAAGTTTATATTTTTCTTAGTTATTTGGTGTTTTGTTGTAGGACATTAGCCTTGATTGACTTTCTTCTATTAATGGTGTTTTTGTTAGTTCTACCATGGCTATCTACGATGTCGTACAGCTTGTGAGGGCTGATGTCTCCACTATTGCACTAGGCATTGCAGCCTCAACAGCTTCCATAATCCTTGGCGGTGGCACCAAAGGAAAGCGTCTCGCAATGCCTAATGCACGTATTATGGTTCATCAACCTCTTGGAGGAGCGAGTGGGCTAGCATTGGATGTGGAAATTCAAGCACGCGAAATCATGCAGAACAAGGACAACGTTATAAGAATCATCTCTGAATTCACTGGCCATCCATTTGAAAAGGTCCAAAAAGATATCGATAGGGATCGTTATATGTCACCCATAGAGGCTGTAGAATATGGATTTATTGATGGAGTAATCGACCAAGACAGCATTATACCGCTCATGCCAGTGCCCGATAAAGTGAAAGGAAAATTCAATTATACAGAAGTTATGAAAGATCCCATGAAGTTCTTGACACCAGACGTTCCTGATGACGAGATATATTAGATTTGGGCGTTCTGGCAAACTTTTCTCTAGGGCTTTGATTTAAATGTTTTACATGTAGGATCTTATGTGTAAGCAAAGTCATGGTGGGTGGAAAGGGAAACCAGAATATGATGGAACTTGATGAGCTAATCATCTTTAGAGTTTCAACTTTTAGCGAAATGTCTCTACTTACCAGAAGTTAAAAAGGTACTTGGAGTTTGGACTCTTTTTTTTTGGCTATGACATTCTTCAAATGAGCAAAATGAGGATGGAAAAATCGGTATCGATTTGTATTGGCAGTGTATATTTTTCA

mRNA sequence

GGATTATTGAGATTTACAAATTTCCCATAACTTTTGCAATTTATATTTCTTACCCAACCAAATCCCCAAAGTAATCGTCTCTCCACTTCTTCCTCCGTTTGACAAGTGAAGCAGAGCAGTGGCGTAAATCCATGGAGCTTCTTTCACGCTGTTCAACTCTCACTCCTCACGCCTCCTCTCTCGGCCTTCCCAATTCTCATGGAAAACCATCTAATTTCTTCCCCAAGCTCAAATCCACTCTCTCTTTTCCTTCGGCTTCATCAGTACTCAAAACAACCGCTCTTAAACCCTCCAGAACCCTACCTCCGCCGTGCTTCGTTATGACGGCTCCTCAGACGCCGGATGCCGCCCGGAGAGGCGCTGAAACTGACGCCATGGGATTGCTTCTCAGGGAGAGGATCGTCTTCTTGGGGAACAGCATTGATGATTTTGTAGCTGATGCTATTATCAGTCAGCTCTTACTCTTGGATGCCAAGGACTCTACTAAAGATATTAGACTCTTCATTAATTCCGCTGGCGGCTCTCTCAGTTCTACCATGGCTATCTACGATGTCGTACAGCTTGTGAGGGCTGATGTCTCCACTATTGCACTAGGCATTGCAGCCTCAACAGCTTCCATAATCCTTGGCGGTGGCACCAAAGGAAAGCGTCTCGCAATGCCTAATGCACGTATTATGGTTCATCAACCTCTTGGAGGAGCGAGTGGGCTAGCATTGGATGTGGAAATTCAAGCACGCGAAATCATGCAGAACAAGGACAACGTTATAAGAATCATCTCTGAATTCACTGGCCATCCATTTGAAAAGGTCCAAAAAGATATCGATAGGGATCGTTATATGTCACCCATAGAGGCTGTAGAATATGGATTTATTGATGGAGTAATCGACCAAGACAGCATTATACCGCTCATGCCAGTGCCCGATAAAGTGAAAGGAAAATTCAATTATACAGAAGTTATGAAAGATCCCATGAAGTTCTTGACACCAGACGTTCCTGATGACGAGATATATTAGATTTGGGCGTTCTGGCAAACTTTTCTCTAGGGCTTTGATTTAAATGTTTTACATGTAGGATCTTATGTGTAAGCAAAGTCATGGTGGGTGGAAAGGGAAACCAGAATATGATGGAACTTGATGAGCTAATCATCTTTAGAGTTTCAACTTTTAGCGAAATGTCTCTACTTACCAGAAGTTAAAAAGGTACTTGGAGTTTGGACTCTTTTTTTTTGGCTATGACATTCTTCAAATGAGCAAAATGAGGATGGAAAAATCGGTATCGATTTGTATTGGCAGTGTATATTTTTCA

Coding sequence (CDS)

ATGGAGCTTCTTTCACGCTGTTCAACTCTCACTCCTCACGCCTCCTCTCTCGGCCTTCCCAATTCTCATGGAAAACCATCTAATTTCTTCCCCAAGCTCAAATCCACTCTCTCTTTTCCTTCGGCTTCATCAGTACTCAAAACAACCGCTCTTAAACCCTCCAGAACCCTACCTCCGCCGTGCTTCGTTATGACGGCTCCTCAGACGCCGGATGCCGCCCGGAGAGGCGCTGAAACTGACGCCATGGGATTGCTTCTCAGGGAGAGGATCGTCTTCTTGGGGAACAGCATTGATGATTTTGTAGCTGATGCTATTATCAGTCAGCTCTTACTCTTGGATGCCAAGGACTCTACTAAAGATATTAGACTCTTCATTAATTCCGCTGGCGGCTCTCTCAGTTCTACCATGGCTATCTACGATGTCGTACAGCTTGTGAGGGCTGATGTCTCCACTATTGCACTAGGCATTGCAGCCTCAACAGCTTCCATAATCCTTGGCGGTGGCACCAAAGGAAAGCGTCTCGCAATGCCTAATGCACGTATTATGGTTCATCAACCTCTTGGAGGAGCGAGTGGGCTAGCATTGGATGTGGAAATTCAAGCACGCGAAATCATGCAGAACAAGGACAACGTTATAAGAATCATCTCTGAATTCACTGGCCATCCATTTGAAAAGGTCCAAAAAGATATCGATAGGGATCGTTATATGTCACCCATAGAGGCTGTAGAATATGGATTTATTGATGGAGTAATCGACCAAGACAGCATTATACCGCTCATGCCAGTGCCCGATAAAGTGAAAGGAAAATTCAATTATACAGAAGTTATGAAAGATCCCATGAAGTTCTTGACACCAGACGTTCCTGATGACGAGATATATTAG

Protein sequence

MELLSRCSTLTPHASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPPCFVMTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAKDSTKDIRLFINSAGGSLSSTMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGLALDVEIQAREIMQNKDNVIRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGFIDGVIDQDSIIPLMPVPDKVKGKFNYTEVMKDPMKFLTPDVPDDEIY*

Homology

[Close]

BLAST of CSPI03G01000 vs. ExPASy Swiss-Prot
Match: Q94B60 (ATP-dependent Clp protease proteolytic subunit 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPP4 PE=1 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 5.1e-98
Identity = 201/295 (68.14%), Postives = 228/295 (77.29%), Query Frame = 0


Query: 1   MELLSRCSTLTPHASSLGLPNSHGKPSNFFPKLKSTLSFPS--ASSVLKTTALKPSRTLP 60
           M  LS  S+L P   S  L +S    S+ FPK  +    P+   S  L+TT+  P R   
Sbjct: 1   MGTLSLSSSLKPSLVSSRLNSSSSASSSSFPKPNNLYLKPTKLISPPLRTTSPSPLRFAN 60

Query: 61  PPCFVMTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAKDST 120
                +   QT ++A RGAE+D MGLLLRERIVFLG+SIDDFVADAI+SQLLLLDAKD  
Sbjct: 61  AS---IEMSQTQESAIRGAESDVMGLLLRERIVFLGSSIDDFVADAIMSQLLLLDAKDPK 120

Query: 121 KDIRLFINSAGGSLSSTMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPN 180
           KDI+LFINS GGSLS+TMAIYDVVQLVRADVSTIALGIAASTASIILG GTKGKR AMPN
Sbjct: 121 KDIKLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGAGTKGKRFAMPN 180

Query: 181 ARIMVHQPLGGASGLALDVEIQAREIMQNKDNVIRIISEFTGHPFEKVQKDIDRDRYMSP 240
            RIM+HQPLGGASG A+DVEIQA+E+M NK+NV  II+  T   FE+V KDIDRDRYMSP
Sbjct: 181 TRIMIHQPLGGASGQAIDVEIQAKEVMHNKNNVTSIIAGCTSRSFEQVLKDIDRDRYMSP 240

Query: 241 IEAVEYGFIDGVIDQDSIIPLMPVPDKVKGKFNYTEVMKDPMKFLTPDVPDDEIY 294
           IEAVEYG IDGVID DSIIPL PVPD+VK + NY E+ KDPMKFLTP++PDDEIY
Sbjct: 241 IEAVEYGLIDGVIDGDSIIPLEPVPDRVKPRVNYEEISKDPMKFLTPEIPDDEIY 292

[Close]

BLAST of CSPI03G01000 vs. ExPASy Swiss-Prot
Match: Q3ANI8 (ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. (strain CC9605) OX=110662 GN=clpP1 PE=3 SV=2)

HSP 1 Score: 204.9 bits (520), Expect = 1.2e-51
Identity = 101/187 (54.01%), Postives = 139/187 (74.33%), Query Frame = 0


Query: 67  PQTPDAARRGAET-DAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAKDSTKDIRLFI 126
           P   + + RG    D    LLRERI+FLG  +DD VADA+++Q+L L+A+D  KDI+++I
Sbjct: 10  PTVVEQSGRGDRAFDIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQIYI 69

Query: 127 NSAGGSLSSTMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQ 186
           NS GGS+++ +AIYD +Q V  DV TI  G+AAS  + +L GGTKGKRLA+PNARIM+HQ
Sbjct: 70  NSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMIHQ 129

Query: 187 PLGGASGLALDVEIQAREIMQNKDNVIRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYG 246
           PLGGA G A+D+EIQA+EI+  K+ +  +++E TG P +K+ +D DRD ++SP EAVEYG
Sbjct: 130 PLGGAQGQAVDIEIQAKEILYLKETLNGLMAEHTGQPLDKISEDTDRDYFLSPAEAVEYG 189

Query: 247 FIDGVID 253
            ID V+D
Sbjct: 190 LIDRVVD 196

[Close]

BLAST of CSPI03G01000 vs. ExPASy Swiss-Prot
Match: Q3B0U1 (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain CC9902) OX=316279 GN=clpP2 PE=3 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 2.1e-51
Identity = 100/187 (53.48%), Postives = 139/187 (74.33%), Query Frame = 0


Query: 67  PQTPDAARRGAET-DAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAKDSTKDIRLFI 126
           P   + + RG    D    LLRERI+FLG  +DD VADA+++Q+L L+A+D  KDI++++
Sbjct: 10  PTVVEQSGRGDRAFDIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQIYV 69

Query: 127 NSAGGSLSSTMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQ 186
           NS GGS+++ +AIYD +Q V  DV TI  G+AAS  + +L GGTKGKRLA+PNARIM+HQ
Sbjct: 70  NSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMIHQ 129

Query: 187 PLGGASGLALDVEIQAREIMQNKDNVIRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYG 246
           PLGGA G A+D+EIQA+EI+  K+ +  +++E TG P +K+ +D DRD ++SP EAVEYG
Sbjct: 130 PLGGAQGQAVDIEIQAKEILFLKETLNGLLAEHTGQPLDKISEDTDRDYFLSPAEAVEYG 189

Query: 247 FIDGVID 253
            ID V+D
Sbjct: 190 LIDRVVD 196

[Close]

BLAST of CSPI03G01000 vs. ExPASy Swiss-Prot
Match: Q7V992 (ATP-dependent Clp protease proteolytic subunit 1 OS=Prochlorococcus marinus (strain MIT 9313) OX=74547 GN=clpP1 PE=3 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.4e-50
Identity = 100/187 (53.48%), Postives = 138/187 (73.80%), Query Frame = 0


Query: 67  PQTPDAARRGAET-DAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAKDSTKDIRLFI 126
           P   + + RG    D    LLRERI+FLG  +DD VADA+++Q+L L+A+D  KDI+++I
Sbjct: 27  PTVVEQSGRGERAFDIYSRLLRERIIFLGTGVDDQVADALVAQMLFLEAEDPEKDIQIYI 86

Query: 127 NSAGGSLSSTMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQ 186
           NS GGS+++ +AIYD +Q V  DV TI  G+AAS  + +L GGTKGKRLA+PNARIM+HQ
Sbjct: 87  NSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLCGGTKGKRLALPNARIMIHQ 146

Query: 187 PLGGASGLALDVEIQAREIMQNKDNVIRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYG 246
           PLGGA G A+D+EIQA+EI+  K+ +  +++E TG P  K+ +D DRD ++SP +AVEYG
Sbjct: 147 PLGGAQGQAVDIEIQAKEILFLKETLNGLLAEHTGQPLNKIAEDTDRDHFLSPAKAVEYG 206

Query: 247 FIDGVID 253
            ID V+D
Sbjct: 207 LIDRVVD 213

[Close]

BLAST of CSPI03G01000 vs. ExPASy Swiss-Prot
Match: Q7UA36 (ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. (strain WH8102) OX=84588 GN=clpP1 PE=3 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 6.8e-50
Identity = 98/187 (52.41%), Postives = 138/187 (73.80%), Query Frame = 0


Query: 67  PQTPDAARRGAET-DAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAKDSTKDIRLFI 126
           P   + + RG    D    LLRERI+FLG  +DD VADA+++Q+L L+A+D  KDI+++I
Sbjct: 27  PTVVEQSGRGDRAFDIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQIYI 86

Query: 127 NSAGGSLSSTMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQ 186
           NS GGS+++ +AIYD +Q V  DV TI  G+AAS  + +L GG KGKRLA+PNARIM+HQ
Sbjct: 87  NSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGCKGKRLALPNARIMIHQ 146

Query: 187 PLGGASGLALDVEIQAREIMQNKDNVIRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYG 246
           PLGGA G A+D+EIQA+EI+  K+ +  ++++ TG P +K+ +D DRD ++SP EAV+YG
Sbjct: 147 PLGGAQGQAVDIEIQAKEILFLKETLNGLMADHTGQPLDKIAEDTDRDYFLSPAEAVQYG 206

Query: 247 FIDGVID 253
            ID V+D
Sbjct: 207 LIDRVVD 213

[Close]

BLAST of CSPI03G01000 vs. ExPASy TrEMBL
Match: A0A0A0L3S1 (ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus OX=3659 GN=Csa_3G005040 PE=3 SV=1)

HSP 1 Score: 561.6 bits (1446), Expect = 1.9e-156
Identity = 291/293 (99.32%), Postives = 292/293 (99.66%), Query Frame = 0


Query: 1   MELLSRCSTLTPHASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPP 60
           MELLSRCSTLTPHASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPP
Sbjct: 1   MELLSRCSTLTPHASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPP 60

Query: 61  CFVMTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAKDSTKD 120
           C VMTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAKDSTKD
Sbjct: 61  CSVMTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAKDSTKD 120

Query: 121 IRLFINSAGGSLSSTMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNAR 180
           IRLFINSAGGSLSSTMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNAR
Sbjct: 121 IRLFINSAGGSLSSTMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNAR 180

Query: 181 IMVHQPLGGASGLALDVEIQAREIMQNKDNVIRIISEFTGHPFEKVQKDIDRDRYMSPIE 240
           IMVHQPLGGASGLALDVEIQAREIMQNKDNVIRIISEFTGHPFEKVQKDIDRDRYMSPIE
Sbjct: 181 IMVHQPLGGASGLALDVEIQAREIMQNKDNVIRIISEFTGHPFEKVQKDIDRDRYMSPIE 240

Query: 241 AVEYGFIDGVIDQDSIIPLMPVPDKVKGKFNYTEVMKDPMKFLTPDVPDDEIY 294
           AVEYGFIDGVIDQDSIIPLMPVPDKVKGKFNYTEVMKDPMKFLTPDVPDDEI+
Sbjct: 241 AVEYGFIDGVIDQDSIIPLMPVPDKVKGKFNYTEVMKDPMKFLTPDVPDDEIF 293

[Close]

BLAST of CSPI03G01000 vs. ExPASy TrEMBL
Match: A0A1S3BJF4 (ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo OX=3656 GN=LOC103490719 PE=3 SV=1)

HSP 1 Score: 521.9 bits (1343), Expect = 1.7e-144
Identity = 270/293 (92.15%), Postives = 280/293 (95.56%), Query Frame = 0


Query: 1   MELLSRCSTLTPHASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPP 60
           MELLSRCSTL P ASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPP
Sbjct: 1   MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPP 60

Query: 61  CFVMTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAKDSTKD 120
           C VMTAPQTPDA+RRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDA+DSTKD
Sbjct: 61  CSVMTAPQTPDASRRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKD 120

Query: 121 IRLFINSAGGSLSSTMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNAR 180
           IRLFINSAGGSLS+TMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNAR
Sbjct: 121 IRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNAR 180

Query: 181 IMVHQPLGGASGLALDVEIQAREIMQNKDNVIRIISEFTGHPFEKVQKDIDRDRYMSPIE 240
           IMVHQPLGGASG A+DVEIQAREIM NK+NV RIISEFTGHPFEKVQKDIDRDRYMSPIE
Sbjct: 181 IMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIE 240

Query: 241 AVEYGFIDGVIDQDSIIPLMPVPDKVKGKFNYTEVMKDPMKFLTPDVPDDEIY 294
           AVEYG IDGVID+DSIIPL+PVP++VK   NY E+ KDP KFLTPDVPDDEIY
Sbjct: 241 AVEYGLIDGVIDRDSIIPLVPVPERVKATLNYEEMSKDPRKFLTPDVPDDEIY 293

[Close]

BLAST of CSPI03G01000 vs. ExPASy TrEMBL
Match: A0A6J1CWB9 (ATP-dependent Clp protease proteolytic subunit OS=Momordica charantia OX=3673 GN=LOC111014827 PE=3 SV=1)

HSP 1 Score: 500.0 bits (1286), Expect = 6.9e-138
Identity = 261/294 (88.78%), Postives = 272/294 (92.52%), Query Frame = 0


Query: 1   MELLSRCSTLTPHASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPP 60
           MELLSRCSTL PHASSL LPNSH KPSNF+PKLKS+LSFPSA SVLK TALKPSRTL  P
Sbjct: 1   MELLSRCSTLIPHASSLSLPNSHPKPSNFYPKLKSSLSFPSACSVLKATALKPSRTLASP 60

Query: 61  CFV-MTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAKDSTK 120
           C V MTAPQTPD ARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDA+DSTK
Sbjct: 61  CSVLMTAPQTPDVARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 120

Query: 121 DIRLFINSAGGSLSSTMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180
           DIRLFINS GGSLS+TMAIYDVVQLVRADVSTI LGIAASTASIILGGGTKGKRLAMPNA
Sbjct: 121 DIRLFINSPGGSLSATMAIYDVVQLVRADVSTIGLGIAASTASIILGGGTKGKRLAMPNA 180

Query: 181 RIMVHQPLGGASGLALDVEIQAREIMQNKDNVIRIISEFTGHPFEKVQKDIDRDRYMSPI 240
           RIMVHQPLGGASG A+DVEIQAREIM NK+NV RIISEFTGHPF+KVQKDIDRDRYMSPI
Sbjct: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFDKVQKDIDRDRYMSPI 240

Query: 241 EAVEYGFIDGVIDQDSIIPLMPVPDKVKGKFNYTEVMKDPMKFLTPDVPDDEIY 294
           EAVEYG IDGVID+DSIIPLMPVP++VK   NY E+ KDP KFLTPDVPDDEIY
Sbjct: 241 EAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY 294

[Close]

BLAST of CSPI03G01000 vs. ExPASy TrEMBL
Match: A0A6J1EC18 (ATP-dependent Clp protease proteolytic subunit OS=Cucurbita moschata OX=3662 GN=LOC111431188 PE=3 SV=1)

HSP 1 Score: 498.4 bits (1282), Expect = 2.0e-137
Identity = 260/294 (88.44%), Postives = 275/294 (93.54%), Query Frame = 0


Query: 1   MELLSRCSTLTPHASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPP 60
           MELLSRCSTL PHASSLGL NSHGKPSNF+PKLKS+LSFPSASSVLKTTA KPSRTL   
Sbjct: 48  MELLSRCSTLIPHASSLGLLNSHGKPSNFYPKLKSSLSFPSASSVLKTTARKPSRTLATS 107

Query: 61  CFV-MTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAKDSTK 120
           C V MT PQTPDAA+RGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDA+DSTK
Sbjct: 108 CSVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 167

Query: 121 DIRLFINSAGGSLSSTMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180
           DIRLFINS+GGSLS+TMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA
Sbjct: 168 DIRLFINSSGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 227

Query: 181 RIMVHQPLGGASGLALDVEIQAREIMQNKDNVIRIISEFTGHPFEKVQKDIDRDRYMSPI 240
           RIMVHQPLGGASG A+DVEIQAREIM NK+N+ RIISEFTGHPFEKVQKDIDRDRYMSPI
Sbjct: 228 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPI 287

Query: 241 EAVEYGFIDGVIDQDSIIPLMPVPDKVKGKFNYTEVMKDPMKFLTPDVPDDEIY 294
           EAVEYG IDGVID+DSIIPL+PVP++VK   NY E+ KDP KFL+PDVPDDEIY
Sbjct: 288 EAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYIEISKDPKKFLSPDVPDDEIY 341

[Close]

BLAST of CSPI03G01000 vs. ExPASy TrEMBL
Match: A0A6J1HNH6 (ATP-dependent Clp protease proteolytic subunit OS=Cucurbita maxima OX=3661 GN=LOC111465249 PE=3 SV=1)

HSP 1 Score: 491.5 bits (1264), Expect = 2.4e-135
Identity = 257/294 (87.41%), Postives = 272/294 (92.52%), Query Frame = 0


Query: 1   MELLSRCSTLTPHASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPP 60
           MELLSRCSTL PHASSLGL NSHGKPSNF+PKLKS LSFPSASSVLKTTA KPSRTL   
Sbjct: 1   MELLSRCSTLIPHASSLGLLNSHGKPSNFYPKLKSGLSFPSASSVLKTTARKPSRTLATS 60

Query: 61  CFV-MTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAKDSTK 120
             V MT PQTPDAA+RGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDA+DSTK
Sbjct: 61  SSVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 120

Query: 121 DIRLFINSAGGSLSSTMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180
           DIRLFINS+GGSLS+TMAIYDV+QLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA
Sbjct: 121 DIRLFINSSGGSLSATMAIYDVIQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180

Query: 181 RIMVHQPLGGASGLALDVEIQAREIMQNKDNVIRIISEFTGHPFEKVQKDIDRDRYMSPI 240
           RIMVHQPLGGASG A+DVEIQAREIM NK+N+ RIISEFTGHPFEKVQKDIDRDRYMSPI
Sbjct: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPI 240

Query: 241 EAVEYGFIDGVIDQDSIIPLMPVPDKVKGKFNYTEVMKDPMKFLTPDVPDDEIY 294
           EAVEYG IDGVID+DSIIPL+PVP++VK   NY E+ KDP KF +PDVPDDEIY
Sbjct: 241 EAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYIEISKDPKKFFSPDVPDDEIY 294

[Close]

BLAST of CSPI03G01000 vs. NCBI nr
Match: XP_004146125.1 (ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Cucumis sativus] >KGN55689.1 hypothetical protein Csa_010517 [Cucumis sativus])

HSP 1 Score: 561.6 bits (1446), Expect = 4.0e-156
Identity = 291/293 (99.32%), Postives = 292/293 (99.66%), Query Frame = 0


Query: 1   MELLSRCSTLTPHASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPP 60
           MELLSRCSTLTPHASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPP
Sbjct: 1   MELLSRCSTLTPHASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPP 60

Query: 61  CFVMTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAKDSTKD 120
           C VMTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAKDSTKD
Sbjct: 61  CSVMTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAKDSTKD 120

Query: 121 IRLFINSAGGSLSSTMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNAR 180
           IRLFINSAGGSLSSTMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNAR
Sbjct: 121 IRLFINSAGGSLSSTMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNAR 180

Query: 181 IMVHQPLGGASGLALDVEIQAREIMQNKDNVIRIISEFTGHPFEKVQKDIDRDRYMSPIE 240
           IMVHQPLGGASGLALDVEIQAREIMQNKDNVIRIISEFTGHPFEKVQKDIDRDRYMSPIE
Sbjct: 181 IMVHQPLGGASGLALDVEIQAREIMQNKDNVIRIISEFTGHPFEKVQKDIDRDRYMSPIE 240

Query: 241 AVEYGFIDGVIDQDSIIPLMPVPDKVKGKFNYTEVMKDPMKFLTPDVPDDEIY 294
           AVEYGFIDGVIDQDSIIPLMPVPDKVKGKFNYTEVMKDPMKFLTPDVPDDEI+
Sbjct: 241 AVEYGFIDGVIDQDSIIPLMPVPDKVKGKFNYTEVMKDPMKFLTPDVPDDEIF 293

[Close]

BLAST of CSPI03G01000 vs. NCBI nr
Match: XP_008448589.1 (PREDICTED: ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Cucumis melo])

HSP 1 Score: 521.9 bits (1343), Expect = 3.5e-144
Identity = 270/293 (92.15%), Postives = 280/293 (95.56%), Query Frame = 0


Query: 1   MELLSRCSTLTPHASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPP 60
           MELLSRCSTL P ASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPP
Sbjct: 1   MELLSRCSTLIPQASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPP 60

Query: 61  CFVMTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAKDSTKD 120
           C VMTAPQTPDA+RRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDA+DSTKD
Sbjct: 61  CSVMTAPQTPDASRRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTKD 120

Query: 121 IRLFINSAGGSLSSTMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNAR 180
           IRLFINSAGGSLS+TMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNAR
Sbjct: 121 IRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNAR 180

Query: 181 IMVHQPLGGASGLALDVEIQAREIMQNKDNVIRIISEFTGHPFEKVQKDIDRDRYMSPIE 240
           IMVHQPLGGASG A+DVEIQAREIM NK+NV RIISEFTGHPFEKVQKDIDRDRYMSPIE
Sbjct: 181 IMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPIE 240

Query: 241 AVEYGFIDGVIDQDSIIPLMPVPDKVKGKFNYTEVMKDPMKFLTPDVPDDEIY 294
           AVEYG IDGVID+DSIIPL+PVP++VK   NY E+ KDP KFLTPDVPDDEIY
Sbjct: 241 AVEYGLIDGVIDRDSIIPLVPVPERVKATLNYEEMSKDPRKFLTPDVPDDEIY 293

[Close]

BLAST of CSPI03G01000 vs. NCBI nr
Match: XP_038876611.1 (ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Benincasa hispida])

HSP 1 Score: 508.4 bits (1308), Expect = 4.0e-140
Identity = 266/294 (90.48%), Postives = 275/294 (93.54%), Query Frame = 0


Query: 1   MELLSRCSTLTPHASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPP 60
           MELLSRCSTL PHASS+GLP SHGKPSNF PKLKSTLSFPSASSVLKTTA KPSRT  PP
Sbjct: 1   MELLSRCSTLLPHASSIGLPTSHGKPSNFLPKLKSTLSFPSASSVLKTTAPKPSRTPAPP 60

Query: 61  CFV-MTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAKDSTK 120
           C V MTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDA+DSTK
Sbjct: 61  CSVLMTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 120

Query: 121 DIRLFINSAGGSLSSTMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180
           DIRLFINSAGGSLS+TMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA
Sbjct: 121 DIRLFINSAGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180

Query: 181 RIMVHQPLGGASGLALDVEIQAREIMQNKDNVIRIISEFTGHPFEKVQKDIDRDRYMSPI 240
           RIMVHQPLGGASG A+DVEIQAREIM NK+NV RIISEFTGHPFEKVQKDIDRDRYMSPI
Sbjct: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFEKVQKDIDRDRYMSPI 240

Query: 241 EAVEYGFIDGVIDQDSIIPLMPVPDKVKGKFNYTEVMKDPMKFLTPDVPDDEIY 294
           EAVEYG IDGVID+DSIIPLMPVP++VK   NY E+ KDP KFL PDVPDDEIY
Sbjct: 241 EAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDPTKFLNPDVPDDEIY 294

[Close]

BLAST of CSPI03G01000 vs. NCBI nr
Match: KAG7015794.1 (ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 501.5 bits (1290), Expect = 4.9e-138
Identity = 261/294 (88.78%), Postives = 276/294 (93.88%), Query Frame = 0


Query: 1   MELLSRCSTLTPHASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPP 60
           MELLSRCSTL PHASSLGL NSHGKPSNF+PKLKS+LSFPSASSVLKTTA KPSRTL P 
Sbjct: 1   MELLSRCSTLIPHASSLGLLNSHGKPSNFYPKLKSSLSFPSASSVLKTTARKPSRTLAPS 60

Query: 61  CFV-MTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAKDSTK 120
           C V MT PQTPDAA+RGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDA+DSTK
Sbjct: 61  CSVHMTGPQTPDAAQRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 120

Query: 121 DIRLFINSAGGSLSSTMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180
           DIRLFINS+GGSLS+TMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA
Sbjct: 121 DIRLFINSSGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180

Query: 181 RIMVHQPLGGASGLALDVEIQAREIMQNKDNVIRIISEFTGHPFEKVQKDIDRDRYMSPI 240
           RIMVHQPLGGASG A+DVEIQAREIM NK+N+ RIISEFTGHPFEKVQKDIDRDRYMSPI
Sbjct: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPI 240

Query: 241 EAVEYGFIDGVIDQDSIIPLMPVPDKVKGKFNYTEVMKDPMKFLTPDVPDDEIY 294
           EAVEYG IDGVID+DSIIPL+PVP++VK   NY E+ KDP KFL+PDVPDDEIY
Sbjct: 241 EAVEYGLIDGVIDKDSIIPLVPVPERVKASLNYIEISKDPKKFLSPDVPDDEIY 294

[Close]

BLAST of CSPI03G01000 vs. NCBI nr
Match: XP_022145352.1 (ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Momordica charantia])

HSP 1 Score: 500.0 bits (1286), Expect = 1.4e-137
Identity = 261/294 (88.78%), Postives = 272/294 (92.52%), Query Frame = 0


Query: 1   MELLSRCSTLTPHASSLGLPNSHGKPSNFFPKLKSTLSFPSASSVLKTTALKPSRTLPPP 60
           MELLSRCSTL PHASSL LPNSH KPSNF+PKLKS+LSFPSA SVLK TALKPSRTL  P
Sbjct: 1   MELLSRCSTLIPHASSLSLPNSHPKPSNFYPKLKSSLSFPSACSVLKATALKPSRTLASP 60

Query: 61  CFV-MTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAKDSTK 120
           C V MTAPQTPD ARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDA+DSTK
Sbjct: 61  CSVLMTAPQTPDVARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAQDSTK 120

Query: 121 DIRLFINSAGGSLSSTMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNA 180
           DIRLFINS GGSLS+TMAIYDVVQLVRADVSTI LGIAASTASIILGGGTKGKRLAMPNA
Sbjct: 121 DIRLFINSPGGSLSATMAIYDVVQLVRADVSTIGLGIAASTASIILGGGTKGKRLAMPNA 180

Query: 181 RIMVHQPLGGASGLALDVEIQAREIMQNKDNVIRIISEFTGHPFEKVQKDIDRDRYMSPI 240
           RIMVHQPLGGASG A+DVEIQAREIM NK+NV RIISEFTGHPF+KVQKDIDRDRYMSPI
Sbjct: 181 RIMVHQPLGGASGQAIDVEIQAREIMHNKNNVTRIISEFTGHPFDKVQKDIDRDRYMSPI 240

Query: 241 EAVEYGFIDGVIDQDSIIPLMPVPDKVKGKFNYTEVMKDPMKFLTPDVPDDEIY 294
           EAVEYG IDGVID+DSIIPLMPVP++VK   NY E+ KDP KFLTPDVPDDEIY
Sbjct: 241 EAVEYGLIDGVIDKDSIIPLMPVPERVKASLNYEEISKDPRKFLTPDVPDDEIY 294

[Close]

BLAST of CSPI03G01000 vs. TAIR 10
Match: AT5G45390.1 (CLP protease P4 )

HSP 1 Score: 359.0 bits (920), Expect = 3.6e-99
Identity = 201/295 (68.14%), Postives = 228/295 (77.29%), Query Frame = 0


Query: 1   MELLSRCSTLTPHASSLGLPNSHGKPSNFFPKLKSTLSFPS--ASSVLKTTALKPSRTLP 60
           M  LS  S+L P   S  L +S    S+ FPK  +    P+   S  L+TT+  P R   
Sbjct: 1   MGTLSLSSSLKPSLVSSRLNSSSSASSSSFPKPNNLYLKPTKLISPPLRTTSPSPLRFAN 60

Query: 61  PPCFVMTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAKDST 120
                +   QT ++A RGAE+D MGLLLRERIVFLG+SIDDFVADAI+SQLLLLDAKD  
Sbjct: 61  AS---IEMSQTQESAIRGAESDVMGLLLRERIVFLGSSIDDFVADAIMSQLLLLDAKDPK 120

Query: 121 KDIRLFINSAGGSLSSTMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPN 180
           KDI+LFINS GGSLS+TMAIYDVVQLVRADVSTIALGIAASTASIILG GTKGKR AMPN
Sbjct: 121 KDIKLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGAGTKGKRFAMPN 180

Query: 181 ARIMVHQPLGGASGLALDVEIQAREIMQNKDNVIRIISEFTGHPFEKVQKDIDRDRYMSP 240
            RIM+HQPLGGASG A+DVEIQA+E+M NK+NV  II+  T   FE+V KDIDRDRYMSP
Sbjct: 181 TRIMIHQPLGGASGQAIDVEIQAKEVMHNKNNVTSIIAGCTSRSFEQVLKDIDRDRYMSP 240

Query: 241 IEAVEYGFIDGVIDQDSIIPLMPVPDKVKGKFNYTEVMKDPMKFLTPDVPDDEIY 294
           IEAVEYG IDGVID DSIIPL PVPD+VK + NY E+ KDPMKFLTP++PDDEIY
Sbjct: 241 IEAVEYGLIDGVIDGDSIIPLEPVPDRVKPRVNYEEISKDPMKFLTPEIPDDEIY 292

[Close]

BLAST of CSPI03G01000 vs. TAIR 10
Match: AT1G66670.1 (CLP protease proteolytic subunit 3 )

HSP 1 Score: 190.7 bits (483), Expect = 1.7e-48
Identity = 108/248 (43.55%), Postives = 150/248 (60.48%), Query Frame = 0


Query: 24  GKPSNF------FPKLKSTLSFPSASSVLKTTALKPSRTLPPPCF-VMTAPQTPDAARRG 83
           GK  NF       PK        S+ S+ K      S       F + +  Q+P      
Sbjct: 22  GKNLNFPIRNHRIPKTSKPFCVRSSMSLSKPPRQTLSSNWDVSSFSIDSVAQSPSRLPSF 81

Query: 84  AETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAKDSTKDIRLFINSAGGSLSSTM 143
            E D   +LLR+RIVFLG+ +DD  AD +ISQLLLLDA+DS +DI LFINS GGS+++ M
Sbjct: 82  EELDTTNMLLRQRIVFLGSQVDDMTADLVISQLLLLDAEDSERDITLFINSPGGSITAGM 141

Query: 144 AIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGLALD 203
            IYD ++  +ADVST+ LG+AAS  + +L  G+KGKR  MPN+++M+HQPLG A G A +
Sbjct: 142 GIYDAMKQCKADVSTVCLGLAASMGAFLLASGSKGKRYCMPNSKVMIHQPLGTAGGKATE 201

Query: 204 VEIQAREIMQNKDNVIRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGFIDGVIDQDSI 263
           + I+ RE+M +K  + +I S  TG P  +++ D DRD +++P EA EYG ID VID    
Sbjct: 202 MSIRIREMMYHKIKLNKIFSRITGKPESEIESDTDRDNFLNPWEAKEYGLIDAVIDDGKP 261

Query: 264 IPLMPVPD 265
             + P+ D
Sbjct: 262 GLIAPIGD 269

[Close]

BLAST of CSPI03G01000 vs. TAIR 10
Match: AT1G02560.1 (nuclear encoded CLP protease 5 )

HSP 1 Score: 171.8 bits (434), Expect = 8.3e-43
Identity = 84/167 (50.30%), Postives = 122/167 (73.05%), Query Frame = 0


Query: 85  LLRERIVFLGNSIDDFVADAIISQLLLLDAKDSTKDIRLFINSAGGSLSSTMAIYDVVQL 144
           L + RI+  G ++DD +A+ I++QLL LDA D TKDI +++NS GGS+++ MAI+D ++ 
Sbjct: 119 LFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPTKDIVMYVNSPGGSVTAGMAIFDTMRH 178

Query: 145 VRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGLALDVEIQAREI 204
           +R DVST+ +G+AAS  + +L  GTKGKR ++PN+RIM+HQPLGGA G   D++IQA E+
Sbjct: 179 IRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEM 238

Query: 205 MQNKDNVIRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGFIDGVI 252
           + +K N+   ++  TG   EK+ +D DRD +MS  EA EYG IDGVI
Sbjct: 239 LHHKANLNGYLAYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVI 285

[Close]

BLAST of CSPI03G01000 vs. TAIR 10
Match: AT1G11750.1 (CLP protease proteolytic subunit 6 )

HSP 1 Score: 157.9 bits (398), Expect = 1.2e-38
Identity = 78/188 (41.49%), Postives = 115/188 (61.17%), Query Frame = 0


Query: 67  PQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAKDSTKDIRLFIN 126
           P  P     G   D   +L R RI+F+G  I+  VA  +ISQL+ L + D   DI +++N
Sbjct: 83  PVMPSVMTPGGPLDLSSVLFRNRIIFIGQPINAQVAQRVISQLVTLASIDDKSDILMYLN 142

Query: 127 SAGGSLSSTMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQP 186
             GGS  S +AIYD +  ++  V T+A G+AAS  +++L GG KG R AMPN R+M+HQP
Sbjct: 143 CPGGSTYSVLAIYDCMSWIKPKVGTVAFGVAASQGALLLAGGEKGMRYAMPNTRVMIHQP 202

Query: 187 LGGASGLALDVEIQAREIMQNKDNVIRIISEFTGHPFEKVQKDIDRDRYMSPIEAVEYGF 246
             G  G   DV  Q  E ++ +  + R+ + FTG P EKVQ+  +RDR++S  EA+E+G 
Sbjct: 203 QTGCGGHVEDVRRQVNEAIEARQKIDRMYAAFTGQPLEKVQQYTERDRFLSASEALEFGL 262

Query: 247 IDGVIDQD 255
           IDG+++ +
Sbjct: 263 IDGLLETE 270

[Close]

BLAST of CSPI03G01000 vs. TAIR 10
Match: AT1G11750.2 (CLP protease proteolytic subunit 6 )

HSP 1 Score: 156.0 bits (393), Expect = 4.7e-38
Identity = 95/253 (37.55%), Postives = 142/253 (56.13%), Query Frame = 0


Query: 11  TPHASSL--GL-PNSHGKPSNFFPKLKSTLSFPSASSVLKTT------ALKPSRTLPPPC 70
           +P+  SL  GL  N  G P     K  S+L  P  + +  +T       ++  +  PP  
Sbjct: 44  SPYGDSLKAGLSSNVSGSPIKIDNKAPSSLPLPILNILKSSTVYFIFGVIEAKKGNPP-- 103

Query: 71  FVMTAPQTPDAARRGAETDAMGLLLRERIVFLGNSIDDFVADAIISQLLLLDAKDSTKDI 130
            VM +  TP     G   D   +L R RI+F+G  I+  VA  +ISQL+ L + D   DI
Sbjct: 104 -VMPSVMTP-----GGPLDLSSVLFRNRIIFIGQPINAQVAQRVISQLVTLASIDDKSDI 163

Query: 131 RLFINSAGGSLSSTMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARI 190
            +++N  GGS  S +AIYD +  ++  V T+A G+AAS  +++L GG KG R AMPN R+
Sbjct: 164 LMYLNCPGGSTYSVLAIYDCMSWIKPKVGTVAFGVAASQGALLLAGGEKGMRYAMPNTRV 223

Query: 191 MVHQPLGGASGLALDVEIQAREIMQNKDNVIRIISEFTGHPFEKVQKDIDRDRYMSPIEA 250
           M+HQP  G  G   DV  Q  E ++ +  + R+ + FTG P EKVQ+  +RDR++S  EA
Sbjct: 224 MIHQPQTGCGGHVEDVRRQVNEAIEARQKIDRMYAAFTGQPLEKVQQYTERDRFLSASEA 283

Query: 251 VEYGFIDGVIDQD 255
           +E+G IDG+++ +
Sbjct: 284 LEFGLIDGLLETE 288

The following BLAST results are available for this feature:

BLAST of CSPI03G01000 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94B60	5.1e-98	68.14	ATP-dependent Clp protease proteolytic subunit 4, chloroplastic OS=Arabidopsis t...	[more]
Q3ANI8	1.2e-51	54.01	ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. (strain CC...	[more]
Q3B0U1	2.1e-51	53.48	ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain CC...	[more]
Q7V992	1.4e-50	53.48	ATP-dependent Clp protease proteolytic subunit 1 OS=Prochlorococcus marinus (str...	[more]
Q7UA36	6.8e-50	52.41	ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. (strain WH...	[more]

BLAST of CSPI03G01000 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L3S1	1.9e-156	99.32	ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus OX=3659 GN=Csa...	[more]
A0A1S3BJF4	1.7e-144	92.15	ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A6J1CWB9	6.9e-138	88.78	ATP-dependent Clp protease proteolytic subunit OS=Momordica charantia OX=3673 GN...	[more]
A0A6J1EC18	2.0e-137	88.44	ATP-dependent Clp protease proteolytic subunit OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1HNH6	2.4e-135	87.41	ATP-dependent Clp protease proteolytic subunit OS=Cucurbita maxima OX=3661 GN=LO...	[more]

BLAST of CSPI03G01000 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146125.1	4.0e-156	99.32	ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Cucumis sativus...	[more]
XP_008448589.1	3.5e-144	92.15	PREDICTED: ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Cucu...	[more]
XP_038876611.1	4.0e-140	90.48	ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Benincasa hispi...	[more]
KAG7015794.1	4.9e-138	88.78	ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Cucurbita argyr...	[more]
XP_022145352.1	1.4e-137	88.78	ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Momordica chara...	[more]

BLAST of CSPI03G01000 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G45390.1	3.6e-99	68.14	CLP protease P4	[more]
AT1G66670.1	1.7e-48	43.55	CLP protease proteolytic subunit 3	[more]
AT1G02560.1	8.3e-43	50.30	nuclear encoded CLP protease 5	[more]
AT1G11750.1	1.2e-38	41.49	CLP protease proteolytic subunit 6	[more]
AT1G11750.2	4.7e-38	37.55	CLP protease proteolytic subunit 6	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001907	ATP-dependent Clp protease proteolytic subunit	PRINTS	PR00127	CLPPROTEASEP	coord: 172..191 score: 57.75 coord: 229..248 score: 53.38 coord: 120..140 score: 53.21 coord: 80..95 score: 46.88 coord: 151..168 score: 50.56
IPR001907	ATP-dependent Clp protease proteolytic subunit	HAMAP	MF_00444	ClpP	coord: 65..254 score: 36.083122
IPR001907	ATP-dependent Clp protease proteolytic subunit	CDD	cd07017	S14_ClpP_2	coord: 80..250 e-value: 3.10171E-95 score: 276.63
None	No IPR available	GENE3D	3.90.226.10		coord: 63..256 e-value: 5.5E-67 score: 227.3
None	No IPR available	PANTHER	PTHR10381:SF24	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 4, CHLOROPLASTIC	coord: 62..290
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PFAM	PF00574	CLP_protease	coord: 79..253 e-value: 2.5E-69 score: 232.8
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PANTHER	PTHR10381	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT	coord: 62..290
IPR033135	ClpP, histidine active site	PROSITE	PS00382	CLP_PROTEASE_HIS	coord: 173..186
IPR029045	ClpP/crotonase-like domain superfamily	SUPERFAMILY	52096	ClpP/crotonase	coord: 79..256

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G01000.1	CSPI03G01000.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006515	protein quality control for misfolded or incompletely synthesized proteins
biological_process	GO:0006508	proteolysis
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0009368	endopeptidase Clp complex
cellular_component	GO:0009526	plastid envelope
molecular_function	GO:0051117	ATPase binding
molecular_function	GO:0004176	ATP-dependent peptidase activity
molecular_function	GO:0004252	serine-type endopeptidase activity