CSPI03G00990 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G00990
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Ribosomal L28 family
Location	Chr3: 690191 .. 695892 (-)
RNA-Seq Expression	CSPI03G00990
Synteny	CSPI03G00990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGGAAAGAGTAATTTTTCTTTTAATGAAGAAAACCCTTCATTTCTTTTCATTTCTTTCGTGAGACATCCGCCGACCACCCCTCTCTGCCTTTCATCTTCTTCACCAAAGGTTGCAGTTGCTTCGACGCCGCCGCACCCCGTGATCTACTGAACGCCGCTCGTCGCTGTCCGTGGTCACCAGCGTTCTCTCTCTTCCTCTCTACCCGTTTCTCTTTACTAGTCTTCACCGCCACCGCTGCTTGACACCGTCTGTGGGTCGCGGGCTGCCGTTTAACTGTCAGAATCTTGGTTCTTGCATTTTTTTTTTGGTGGTAAGGCTTGATATTTTTGTGGGTTTTTGTTGAATTTTTACCCAATAGTTAGTCGATTATGTTTATCCATACATTGGTTCCTAGATTTGAGTTCTAAAAAAACGGGAGTGGGTTCTTGTGTTATCGGAGACTCTTTGGTTATGTGTTGGGGACTTTTTGTAGCGGATATTGGAATTTGAAGTGGTATTGAGTTAAATAGTAATTCGTTGAATGTTTAGGTGGTTCTATACTTTGCTTAGGAGGGAAGGGCTTGTTAGCTTGTAATGCATTGTTTTTGGTTCTAACTTTTAAGTGACTTATTACTGGTTTTCCCTCGATTCTAAGCTGATGTTAAAGATGTTGATGGCTAAACACGATTCTAGTATAATGGATTCAATTATTATGCTACTTTAGGGAGTTTTGGAGTTATGCTATGGAAGTTATGATACTATGCGTATCTGTTGCTATGTTTGATTGATGGACTCTTGTTCTGAATAACTCAGGAGTTAGGTTCTAAAATATGAATATGTGACTGTGATTATGTTGGAATGATGGTGATTGCAATCATTTTAACGATGTTTTGGTGACCTGTTGAGGATCGCTACTTATGATTATGTTTGGTGACTTGTCAAGGATTTCTACCTACAAGCATGCCTTTGGGTTCGCCCTTATGCCTTTGTTTACAACTATGTCGGTATGCACATAGTTTTATTAGGAATGGTTAACAGGTACATCTAGTGGGTCTAATAATGGGTCACTTGTTGAGTATTCTTATACTTGTCATTTTCAAAGGCAAGAACAAACCAACGAATGTCAAGAAGAATCTGTGATTGAGCCTATTGACGTGGCTTCTGCATACATTTTAAAAATATTTATATTTTAAAAAATTTTACAAGTTTTTTGGTTGTTTAATTATTTATTTTTTAAAATTATTTGAACTTAGATTTAGGGGTACCCTGAACGATGATTTATTGAATTTGTTTTTGAAACTTTACTTATTAAAACAATTTTGTTTCATTTAGTTGATTTTGGCCAGAAATATATTTTTAAGCTTATACATGCATGAAGTAACATCCTTGGCATGTTGGAAATATGGGACGTTACAAATGGCATCATATCCGATTTTCGCCTGATTCAACGACATATTCATTGTGTTTTTCCATTCTGCTGATAGATTTTCTTTCTTTTGTGAAGGTCTTTTTGCTGATGGGTTTTTGTGTTGCTTCTTAGGCATTTACTGAACGAAGGACTGAAACAAACTAATGGCTGATGAAAACTTCATTTCTTCTCAAATCCTGCTGCTTGAAATATAGTACCCAACCTGTACAGACTGGAATTTCATCGAGCTCAATTTTCTTTCTGTAGAAGCTTGTTGGCAGTAATTCAAGCACCTTGCTGCAGATTGTTGTACTTCTGCTCCTATTTTTGGCATTACGGTTGATTCTACAAGGGAGAGAGTCCATAATGGCCTTTAGAGGAAAGGAAATGATGAAGAAGATACTGAAGAAAGTTGGAGAGAACAATTTGGCACCTGGAGTGAAAGATTCGTTGAAGAAATGTATTCCGGACAGCAAAATAGTGATGGGTAGAGCAAACCGCGGTATTTATGCTGGCCGTCACATACGATTCGGCAATCGTGTCAGTGAAGATGGTGGTAACAAGTATGACCCTCTTGTATACTCTTTATCTTTCTTAGAATCATTGGTTGATTTTTCTCTCTGAATTTGAATACATTTTACTTATTTTCTGAATTCTATGGTGTTAGACCAGTAGAATATGAGTTAAGGCATTAACATCTACTTCTTCTTTCTATGAGGTCTTGCATATTCAAATTTGCATGCCCTCATTGTACTGCAAAAGAGTGAGAGCTCATTGATAATATTATATTACAGAAAGGAAAAACCTCATGAGATGGATTACAAAAGATGTATCCAATTGGAAAGGAAGGAGGAAAGGAATAGCTATAGGGATGGAAGAGGGGAACGTTTACACTAAAAAACTAGATGTTAATTATAACTTATTTTTGCACTGTCTCTCTACTAGGTAAGCTTGGAACACTTTGTTAGAATTTTTTATTTGGAGCTTTGTCTTCGTAGTAAGGTTGATAGTTGGTTGATTGAAGGGCTCAACATTAGAGGTTATAGCTCAAAAGGAAACATCTTATGGAGATGTGCTACTCGGTCCCTTTTGAGGTGCATTTGGAAAGAAAGGAGTGGTAGAATTTTTTAAGATAGCTATAATTCTTTTGATTCTTTTTGGACTGTGTTGTAACACACAACTTCTTGGTGGAGTACAAATTACACCAAACACTTTTGTAATTATATTCAACAACTGGAAGGCGATCATTTTTTGGTTTCTTTTGGGGAGTCTTGTGCCTTGCTCTTAGGTTCTTCTCTTTTGTTATAGGAATATACATGTTTCTTATAAGAAGAAAAATCTGGGATAGTGTAGTTCTTTCTCTTGGAAGATTCAATTGTTTCTTTCTTGTCAATTGATCCATCAGAAGGCTCTTATGAAATCTCTCTTTTAATTTATTGTTTTTTTTCTCTCAGTACCTTTTAGTTGGTGAAGTCTTTTGTAAATCCCCCCAATGGGATCCCATCTTTTATAATTTCACACCGTTGATGAAATCATTTCTTATCCAAAACAAAAAATCACGGCAGGTGAAGGTACCCTAAATAAATTCATTGCACTTCAAATCATGATTTTTTCTTTTCAAGAAGAGAAGATTGTTGCTTCTAAGTTTTGCTGAAGTTATTTGATAGGACTTGGTCAACATTTTTATTTATCCCACGTATCAAGGGAAGTTTTGACTTTGAGAGCATCCTGTCTCTCCCAATTCTCCTCAGAGAACCACAACAAAATCACAGCCAAAAAGATCCCCTATGTAACAACACTCCCCTCTATGACAGCCTCCTCCCTCTACTTGTTACACATTATATTCGATTTTTCTTCTTCACATGCCTGCTCATAGACCATAGTGATTTGGGGCTTATCATTATTGAATTTATTGTTTTTCTGCTCTCCTTCACTTTGTATGAATAGCCACGAGTGCCGATAAAAACAATGTTCATAGATTGCTGGATCACTAACCATAACTGGAATTGGGTATTCATTGATGTAAGTTTGAAATAACGAATTGTCACGACAGCTGTTTAAGGTGAATTTTATCTTCTTTTTTATGCCTCATTTTGATAAATGTTTGCATTTGGATGCGGGGTAAGCATGAGTTTATTGTGCTTCTAGAACTCTTAAACACACTGCTTGATTAGGAAAGATCTAGAATCAAGTGGAGATTTTATTTTAATCAAATAACGTGTTTTTTATGTCCCGCTCCTATATCAATCCTCATGTATGTGGAAGATCTCTCAGGAAGGATGATTAGGGCATCAGGTGGGATTTAGTGTGTAGGTTTGGCTTCCTAAGGCAACCTTCTATTTGACAACCTAGGTTTGATTGGAGAAACTAACCGGCTTGAACAATGGCTTACCATCACAATTTTCAAGCCAAGCTTTCTAGACTTGCTCTTCAAACACAGAACCTGTGGCCCAGATGGTTAGATTTTAAGAAGAGAAAATGAACTTAAGGTTGTGTTACCTTCTAGAGGTTTGTAATTAGCTATTGGTAGTGGAGCTTCAGCATTGGTTTGCAAGCACTCACCGTCAATGTCTTAAAAAACTATCGAGGCTTACACCTTGAGGCGCTTGCCTCAAGGCAAGGCTCTAAGTTTTAGTCTCAAGACATACGCCTTTGTTGAACCATAAGAGGCGTACTCTTCTCACAAATGTGGCTTACGCCTTTGGGAAACAACATGGAAGCTTAAAATCTCTAGCCCCGCCTAGGAAAAATTATAGCAATTTGTCTAATTCTTAAAAAATATTAAGGTTTGAGCTAGGACAATTTGAACTAGGACTATTTTGACATCCTCATCAGCATTAATATTGCTATTATTAGTGATGATGAAGATGTCCTTTTAGAACTTTTTTTATTAAGTGAAAATTATGGAGGTGAAGTTTCTTTTTGCACTTTTATATAACTATCAATGTTTAGTAATACTTGATCATACCAATTTAGGTTTTGTTGTATTTAATTCATTATTTGAGGCTTACGCCTTATACTGCCTTGAGGCATCGCCTCTTGGAGAGGAAAAGCCTCAAGGCCGCCTTTAGCCTTTTAAAACATTGCTCACCGTCCTTCCATTTTTTGAACCAATTATTAGATTATTTCTAAGGTTCGTTTATTCTTTTTCATTATATTCATGAGAAGTTGTTTTCTGTTTAAAAATTCGGTTTTCTTTTGCATGGCTTTATTGGTTTTTGTTGTATTTTTGTAGACTCTTGTGTACATTTCTCGGTTTCTCTCTTATATTCTGATATTTGAGGGTGATATTATAATTTCGTGTACTTCCTTTGTATTGGCTTTATGTTATATAATAAGAGTTTGGTGCCTTTTATTAGTTCTTTTGCTCACAGACATGCATATATACATATGATCGTATCCCCTTCCTCTTGTATTTCTCTTTAATGTTTCTTGTATTTGGACGTTATACTCTTCTCATTGCATCAATAAAAGGTTCCTTTTTTGTTTTTCGAAGAAAAAAAGGAAACCTTCATATTGACATGTGATCTTATACCGTTTCATATTGTCATGCAATCACTTTTTTTTTCCAATTTTGGAGTATTTAGCCTTTATGTGTGCTGGTGCTTATAGATCAAGGAGGAATTGGAAACCAAACGTCCAAGAGAAGCGACTTTTCAGCTATATTCTAGACCGCCATATTCGAGTTAAAGTTACCACTCATGCCCTTCGATGCATCGACAAGGCTGGTGGGATCGACGAGTACCTGCTGAAAACTCCATACCACAAAATGGACACTGAATTGGGGCTGTTTTGGAAGTCAAAGATTGAGACGCTGTATGAAGAACTTGGGAAGATGGAGGTCGTTTTCTTCTCACCAGAGGACGAAGTTAAATTTGAACAACGCTTTAAAGAACTGAAATTATCTGAGAGGGCAGCACGGAGGGAGGCAAGAAGACAAATGTATGGCAGTTCGGCTAAACTCAATCAGATCAAAGAGGGCGGAGAAAAGGGTAATGGATCTAGTGAGGAAGCTGCTGCAAGTTCTGAAGGAGGTTCCCATGGTGATGATAGTCATCAGCAGTGGGTTGCCAATGTCTAATTGCTTACAGGAGACTTTTTCTTCTTCTCAACTTGAGAGTTCAAGCTTTGACTTTTTATCCTCTCTTTCCAAAGATTTGTTTCTTCATTTTTCACTATAACCTTTTGTAGCTTATATTTGTATTTTGTTTAATATATACAGTTAGAAATGAGAATTGTTTTTGGAAATTGAGATGGGAAATCTTCAAACTTTTTGTTCAATAAGATTAGCCGTAGGCTCTGAGATTTGAAG

mRNA sequence

ATTGGAAAGAGTAATTTTTCTTTTAATGAAGAAAACCCTTCATTTCTTTTCATTTCTTTCGTGAGACATCCGCCGACCACCCCTCTCTGCCTTTCATCTTCTTCACCAAAGGTTGCAGTTGCTTCGACGCCGCCGCACCCCGTGATCTACTGAACGCCGCTCGTCGCTGTCCGTGGTCACCAGCGTTCTCTCTCTTCCTCTCTACCCGTTTCTCTTTACTAGTCTTCACCGCCACCGCTGCTTGACACCGTCTGTGGGTCGCGGGCTGCCGTTTAACTGTCAGAATCTTGGTTCTTGCATTTTTTTTTTGGTGGCATTTACTGAACGAAGGACTGAAACAAACTAATGGCTGATGAAAACTTCATTTCTTCTCAAATCCTGCTGCTTGAAATATAGTACCCAACCTGTACAGACTGGAATTTCATCGAGCTCAATTTTCTTTCTGTAGAAGCTTGTTGGCAGTAATTCAAGCACCTTGCTGCAGATTGTTGTACTTCTGCTCCTATTTTTGGCATTACGGTTGATTCTACAAGGGAGAGAGTCCATAATGGCCTTTAGAGGAAAGGAAATGATGAAGAAGATACTGAAGAAAGTTGGAGAGAACAATTTGGCACCTGGAGTGAAAGATTCGTTGAAGAAATGTATTCCGGACAGCAAAATAGTGATGGGTAGAGCAAACCGCGGTATTTATGCTGGCCGTCACATACGATTCGGCAATCGTGTCAGTGAAGATGGTGGTAACAAATCAAGGAGGAATTGGAAACCAAACGTCCAAGAGAAGCGACTTTTCAGCTATATTCTAGACCGCCATATTCGAGTTAAAGTTACCACTCATGCCCTTCGATGCATCGACAAGGCTGGTGGGATCGACGAGTACCTGCTGAAAACTCCATACCACAAAATGGACACTGAATTGGGGCTGTTTTGGAAGTCAAAGATTGAGACGCTGTATGAAGAACTTGGGAAGATGGAGGTCGTTTTCTTCTCACCAGAGGACGAAGTTAAATTTGAACAACGCTTTAAAGAACTGAAATTATCTGAGAGGGCAGCACGGAGGGAGGCAAGAAGACAAATGTATGGCAGTTCGGCTAAACTCAATCAGATCAAAGAGGGCGGAGAAAAGGGTAATGGATCTAGTGAGGAAGCTGCTGCAAGTTCTGAAGGAGGTTCCCATGGTGATGATAGTCATCAGCAGTGGGTTGCCAATGTCTAATTGCTTACAGGAGACTTTTTCTTCTTCTCAACTTGAGAGTTCAAGCTTTGACTTTTTATCCTCTCTTTCCAAAGATTTGTTTCTTCATTTTTCACTATAACCTTTTGTAGCTTATATTTGTATTTTGTTTAATATATACAGTTAGAAATGAGAATTGTTTTTGGAAATTGAGATGGGAAATCTTCAAACTTTTTGTTCAATAAGATTAGCCGTAGGCTCTGAGATTTGAAG

Coding sequence (CDS)

ATGGCCTTTAGAGGAAAGGAAATGATGAAGAAGATACTGAAGAAAGTTGGAGAGAACAATTTGGCACCTGGAGTGAAAGATTCGTTGAAGAAATGTATTCCGGACAGCAAAATAGTGATGGGTAGAGCAAACCGCGGTATTTATGCTGGCCGTCACATACGATTCGGCAATCGTGTCAGTGAAGATGGTGGTAACAAATCAAGGAGGAATTGGAAACCAAACGTCCAAGAGAAGCGACTTTTCAGCTATATTCTAGACCGCCATATTCGAGTTAAAGTTACCACTCATGCCCTTCGATGCATCGACAAGGCTGGTGGGATCGACGAGTACCTGCTGAAAACTCCATACCACAAAATGGACACTGAATTGGGGCTGTTTTGGAAGTCAAAGATTGAGACGCTGTATGAAGAACTTGGGAAGATGGAGGTCGTTTTCTTCTCACCAGAGGACGAAGTTAAATTTGAACAACGCTTTAAAGAACTGAAATTATCTGAGAGGGCAGCACGGAGGGAGGCAAGAAGACAAATGTATGGCAGTTCGGCTAAACTCAATCAGATCAAAGAGGGCGGAGAAAAGGGTAATGGATCTAGTGAGGAAGCTGCTGCAAGTTCTGAAGGAGGTTCCCATGGTGATGATAGTCATCAGCAGTGGGTTGCCAATGTCTAA

Protein sequence

MAFRGKEMMKKILKKVGENNLAPGVKDSLKKCIPDSKIVMGRANRGIYAGRHIRFGNRVSEDGGNKSRRNWKPNVQEKRLFSYILDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMDTELGLFWKSKIETLYEELGKMEVVFFSPEDEVKFEQRFKELKLSERAARREARRQMYGSSAKLNQIKEGGEKGNGSSEEAAASSEGGSHGDDSHQQWVANV*

Homology

[Close]

BLAST of CSPI03G00990 vs. ExPASy Swiss-Prot
Match: P36525 (54S ribosomal protein L24, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MRPL24 PE=1 SV=2)

HSP 1 Score: 73.6 bits (179), Expect = 3.3e-12
Identity = 43/110 (39.09%), Postives = 63/110 (57.27%), Query Frame = 0


Query: 30  KKCIPDSKI----VMGRANRGIYAGRHIRFGNRVSEDGGNKSRRNWKPNVQEKRLFSYIL 89
           +K  PD K     +  ++N+G+Y G  ++FGN +SE    K+R+ W PNV +K L+S  L
Sbjct: 52  RKKFPDYKYGESNIFKQSNKGLYGGSFVQFGNNISESKA-KTRKKWLPNVVKKGLWSETL 111

Query: 90  DRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMDTELG-LFWKSKIETL 135
           +R I +K+T   L+ I K GGID YL K    ++  ELG   WK +   L
Sbjct: 112 NRKISIKMTAKVLKTISKEGGIDNYLTKEKSARI-KELGPTGWKLRYRVL 159

[Close]

BLAST of CSPI03G00990 vs. ExPASy Swiss-Prot
Match: A0L5U1 (50S ribosomal protein L28 OS=Magnetococcus marinus (strain ATCC BAA-1437 / JCM 17883 / MC-1) OX=156889 GN=rpmB PE=3 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 3.4e-09
Identity = 31/71 (43.66%), Postives = 45/71 (63.38%), Query Frame = 0


Query: 43  ANRGIYAGRHIRFGNRVSEDGGNKSRRNWKPNVQEKRLFSYILDRHIRVKVTTHALRCID 102
           A +    G+  + GN+VS     K+RR W PN+Q K L+S  L + ++V ++T ALR +D
Sbjct: 2   ARKRTLGGKAPQAGNKVSH-SQRKTRRQWMPNIQTKALWSITLGQSVKVTISTSALRSVD 61

Query: 103 KAGGIDEYLLK 114
            AGG+D YLLK
Sbjct: 62  NAGGLDNYLLK 71

[Close]

BLAST of CSPI03G00990 vs. ExPASy Swiss-Prot
Match: A9HS05 (50S ribosomal protein L28 OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / CCUG 37298 / CIP 103539 / LMG 7603 / PAl5) OX=272568 GN=rpmB PE=3 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 5.7e-09
Identity = 31/73 (42.47%), Postives = 47/73 (64.38%), Query Frame = 0


Query: 50  GRHIRFGNRVSEDGGNKSRRNWKPNVQEKRLFSYILDRHIRVKVTTHALRCIDKAGGIDE 109
           G+ +  GN VS    NKSRR + PN+QE  L S IL   +R++++T+ +R ++  GG+D 
Sbjct: 9   GKGVLTGNNVSH-ANNKSRRRFLPNLQETSLLSDILGSAVRLRLSTNGIRTVEHNGGLDA 68

Query: 110 YLLKTPYHKMDTE 123
           +LL TP  K+ TE
Sbjct: 69  FLLSTPNRKLPTE 80

[Close]

BLAST of CSPI03G00990 vs. ExPASy Swiss-Prot
Match: Q5FUP5 (50S ribosomal protein L28 OS=Gluconobacter oxydans (strain 621H) OX=290633 GN=rpmB PE=3 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 9.8e-09
Identity = 31/73 (42.47%), Postives = 46/73 (63.01%), Query Frame = 0


Query: 50  GRHIRFGNRVSEDGGNKSRRNWKPNVQEKRLFSYILDRHIRVKVTTHALRCIDKAGGIDE 109
           G+ +  GN VS    NKSRR + PN+QE  L S IL   +R++++T  +R ++  GG+D 
Sbjct: 9   GKGVLTGNNVSH-ANNKSRRRFLPNLQETTLISDILGASVRMRLSTDGIRTVEHNGGLDS 68

Query: 110 YLLKTPYHKMDTE 123
           +LL TP  K+ TE
Sbjct: 69  FLLGTPNRKLPTE 80

[Close]

BLAST of CSPI03G00990 vs. ExPASy Swiss-Prot
Match: B6IW31 (50S ribosomal protein L28 OS=Rhodospirillum centenum (strain ATCC 51521 / SW) OX=414684 GN=rpmB PE=3 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 6.3e-08
Identity = 29/73 (39.73%), Postives = 46/73 (63.01%), Query Frame = 0


Query: 50  GRHIRFGNRVSEDGGNKSRRNWKPNVQEKRLFSYILDRHIRVKVTTHALRCIDKAGGIDE 109
           G+ ++ GN VS    NKSRR W PN+QE  L S  L R +R++++T+ +R I+  GG+D 
Sbjct: 9   GKGVQTGNNVSH-ANNKSRRRWLPNLQETSLLSDTLGRMVRLRLSTNGIRTIEHKGGLDA 68

Query: 110 YLLKTPYHKMDTE 123
            LL  P  +++ +
Sbjct: 69  ALLDIPDARLNQD 80

[Close]

BLAST of CSPI03G00990 vs. ExPASy TrEMBL
Match: A0A0A0L1P8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G005030 PE=3 SV=1)

HSP 1 Score: 434.1 bits (1115), Expect = 3.5e-118
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0


Query: 1   MAFRGKEMMKKILKKVGENNLAPGVKDSLKKCIPDSKIVMGRANRGIYAGRHIRFGNRVS 60
           MAFRGKEMMKKILKKVGENNLAPGVKDSLKKCIPDSKIVMGRANRGIYAGRHIRFGNRVS
Sbjct: 1   MAFRGKEMMKKILKKVGENNLAPGVKDSLKKCIPDSKIVMGRANRGIYAGRHIRFGNRVS 60

Query: 61  EDGGNKSRRNWKPNVQEKRLFSYILDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMD 120
           EDGGNKSRRNWKPNVQEKRLFSYILDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMD
Sbjct: 61  EDGGNKSRRNWKPNVQEKRLFSYILDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMD 120

Query: 121 TELGLFWKSKIETLYEELGKMEVVFFSPEDEVKFEQRFKELKLSERAARREARRQMYGSS 180
           TELGLFWKSKIETLYEELGKMEVVFFSPEDEVKFEQRFKELKLSERAARREARRQMYGSS
Sbjct: 121 TELGLFWKSKIETLYEELGKMEVVFFSPEDEVKFEQRFKELKLSERAARREARRQMYGSS 180

Query: 181 AKLNQIKEGGEKGNGSSEEAAASSEGGSHGDDSHQQWVANV 222
           AKLNQIKEGGEKGNGSSEEAAASSEGGSHGDDSHQQWVANV
Sbjct: 181 AKLNQIKEGGEKGNGSSEEAAASSEGGSHGDDSHQQWVANV 221

[Close]

BLAST of CSPI03G00990 vs. ExPASy TrEMBL
Match: A0A1S3BK21 (54S ribosomal protein L24, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103490718 PE=3 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 1.7e-104
Identity = 205/223 (91.93%), Postives = 212/223 (95.07%), Query Frame = 0


Query: 1   MAFRGKEMMKKILKKVGENNLAPGVKDSLKKCIPDSKIVMGRANRGIYAGRHIRFGNRVS 60
           MAFRGKEMMKKILKKVGENNLAPGVK+SLKK +PDSKIVMGRANRGIYAGRHIRFGNRVS
Sbjct: 1   MAFRGKEMMKKILKKVGENNLAPGVKESLKKWVPDSKIVMGRANRGIYAGRHIRFGNRVS 60

Query: 61  EDGGNKSRRNWKPNVQEKRLFSYILDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMD 120
           EDGGNKSRR WKPNVQEKRLFSYILDRHIRVKVTTHALRCIDKAGGIDEYLLKTPY KMD
Sbjct: 61  EDGGNKSRRKWKPNVQEKRLFSYILDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYQKMD 120

Query: 121 TELGLFWKSKIETLYEELGKMEVVFFSPEDEVKFEQRFKELKLSERAARREARRQMYGSS 180
           TELGLFWK+KIETLYEELGKMEVVFFSPEDE KFEQRFK+LKLSERAAR+EARR++YGSS
Sbjct: 121 TELGLFWKAKIETLYEELGKMEVVFFSPEDEAKFEQRFKDLKLSERAARKEARRKIYGSS 180

Query: 181 A-KLNQIKEGGEKGNGSSEEAAASSEGGSHG-DDSHQQWVANV 222
             KLNQIKEGGE  N SSEE AASSEGGSHG DDSHQQWVANV
Sbjct: 181 TNKLNQIKEGGEDTNVSSEE-AASSEGGSHGDDDSHQQWVANV 222

[Close]

BLAST of CSPI03G00990 vs. ExPASy TrEMBL
Match: A0A6J1E6M9 (uncharacterized protein LOC111431195 OS=Cucurbita moschata OX=3662 GN=LOC111431195 PE=3 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 9.0e-98
Identity = 189/220 (85.91%), Postives = 202/220 (91.82%), Query Frame = 0


Query: 1   MAFRGKEMMKKILKKVGENNLAPGVKDSLKKCIPDSKIVMGRANRGIYAGRHIRFGNRVS 60
           MAFRGKEMMKKILKKVGENNLAPGVKDSLKKCIPDSKIVM RA RGI+AGRHI+FGNR+S
Sbjct: 1   MAFRGKEMMKKILKKVGENNLAPGVKDSLKKCIPDSKIVMNRAKRGIFAGRHIQFGNRIS 60

Query: 61  EDGGNKSRRNWKPNVQEKRLFSYILDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMD 120
           EDGGNKSRRNWKPNVQEKRLFSYILDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMD
Sbjct: 61  EDGGNKSRRNWKPNVQEKRLFSYILDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMD 120

Query: 121 TELGLFWKSKIETLYEELGKMEVVFFSPEDEVKFEQRFKELKLSERAARREARRQMYGSS 180
           TE+GLFWK+KIE LYEELG+MEVVFFSPEDE KFEQ F++LKLSERAAR+EARR+MYGSS
Sbjct: 121 TEIGLFWKAKIEKLYEELGQMEVVFFSPEDEAKFEQGFRDLKLSERAARKEARRRMYGSS 180

Query: 181 AKLNQIKEGGEKGNGSSEEAAASSEGGSHGDDSHQQWVAN 221
            + +QI+EG     GSSEE  A SEGGSHGDD  QQ VAN
Sbjct: 181 TQHDQIEEGQADRAGSSEE-VAGSEGGSHGDDGPQQCVAN 219

[Close]

BLAST of CSPI03G00990 vs. ExPASy TrEMBL
Match: A0A6J1CUG4 (uncharacterized protein LOC111014872 OS=Momordica charantia OX=3673 GN=LOC111014872 PE=3 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 2.2e-96
Identity = 182/220 (82.73%), Postives = 199/220 (90.45%), Query Frame = 0


Query: 1   MAFRGKEMMKKILKKVGENNLAPGVKDSLKKCIPDSKIVMGRANRGIYAGRHIRFGNRVS 60
           MAFRGKEMMKK+LKKVGE NLAPGVK+SLKKCIPDSK+VM RA RGI+AGRHI+FGNRVS
Sbjct: 1   MAFRGKEMMKKVLKKVGEINLAPGVKESLKKCIPDSKVVMNRAKRGIFAGRHIQFGNRVS 60

Query: 61  EDGGNKSRRNWKPNVQEKRLFSYILDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMD 120
           EDGGNKSRR WKPNVQEKRLFSYILDRHIRVKVTTHALRCIDK GGIDEYLLKTPYHKMD
Sbjct: 61  EDGGNKSRRTWKPNVQEKRLFSYILDRHIRVKVTTHALRCIDKVGGIDEYLLKTPYHKMD 120

Query: 121 TELGLFWKSKIETLYEELGKMEVVFFSPEDEVKFEQRFKELKLSERAARREARRQMYGSS 180
           TE+GLFWK+KI  LYEELG+MEVVFFSPEDE KFEQ F+ELKL+ERAAR+EARRQ YGSS
Sbjct: 121 TEIGLFWKAKITKLYEELGQMEVVFFSPEDEAKFEQGFRELKLAERAARKEARRQTYGSS 180

Query: 181 AKLNQIKEGGEKGNGSSEEAAASSEGGSHGDDSHQQWVAN 221
           +  +QI+EG    +G+ +EAA  SEGGSHGDD  QQWVAN
Sbjct: 181 SNHDQIEEGRADRHGTGKEAADGSEGGSHGDDGSQQWVAN 220

[Close]

BLAST of CSPI03G00990 vs. ExPASy TrEMBL
Match: A0A6J1HLI0 (uncharacterized protein LOC111465250 OS=Cucurbita maxima OX=3661 GN=LOC111465250 PE=3 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 2.1e-94
Identity = 182/212 (85.85%), Postives = 196/212 (92.45%), Query Frame = 0


Query: 1   MAFRGKEMMKKILKKVGENNLAPGVKDSLKKCIPDSKIVMGRANRGIYAGRHIRFGNRVS 60
           MAFRGKEMMKKILKKVGENNLAPGVKDSLKKCIPDSK+VM RA RGI+AGRHI+FGNRVS
Sbjct: 1   MAFRGKEMMKKILKKVGENNLAPGVKDSLKKCIPDSKVVMNRAKRGIFAGRHIQFGNRVS 60

Query: 61  EDGGNKSRRNWKPNVQEKRLFSYILDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMD 120
           EDGGNKSRR+WKPNVQEKRLFSYILDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMD
Sbjct: 61  EDGGNKSRRSWKPNVQEKRLFSYILDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMD 120

Query: 121 TELGLFWKSKIETLYEELGKMEVVFFSPEDEVKFEQRFKELKLSERAARREARRQMYGSS 180
           TE+GLFWK+KIE LYEELG+MEVVFFSPEDE KFEQ F++LKLSERAAR+E RR+MYGSS
Sbjct: 121 TEIGLFWKAKIEKLYEELGQMEVVFFSPEDEAKFEQGFRDLKLSERAARKETRRRMYGSS 180

Query: 181 AKLNQIKEGGEKGNGSSEEAAASSEGGSHGDD 213
            + +QI+EG     GSSEE  A SEGGSHGDD
Sbjct: 181 TQRDQIEEGQADRVGSSEE-VAGSEGGSHGDD 211

[Close]

BLAST of CSPI03G00990 vs. NCBI nr
Match: XP_004146126.1 (54S ribosomal protein L24, mitochondrial [Cucumis sativus] >KGN55688.1 hypothetical protein Csa_010295 [Cucumis sativus])

HSP 1 Score: 434.1 bits (1115), Expect = 7.2e-118
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0


Query: 1   MAFRGKEMMKKILKKVGENNLAPGVKDSLKKCIPDSKIVMGRANRGIYAGRHIRFGNRVS 60
           MAFRGKEMMKKILKKVGENNLAPGVKDSLKKCIPDSKIVMGRANRGIYAGRHIRFGNRVS
Sbjct: 1   MAFRGKEMMKKILKKVGENNLAPGVKDSLKKCIPDSKIVMGRANRGIYAGRHIRFGNRVS 60

Query: 61  EDGGNKSRRNWKPNVQEKRLFSYILDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMD 120
           EDGGNKSRRNWKPNVQEKRLFSYILDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMD
Sbjct: 61  EDGGNKSRRNWKPNVQEKRLFSYILDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMD 120

Query: 121 TELGLFWKSKIETLYEELGKMEVVFFSPEDEVKFEQRFKELKLSERAARREARRQMYGSS 180
           TELGLFWKSKIETLYEELGKMEVVFFSPEDEVKFEQRFKELKLSERAARREARRQMYGSS
Sbjct: 121 TELGLFWKSKIETLYEELGKMEVVFFSPEDEVKFEQRFKELKLSERAARREARRQMYGSS 180

Query: 181 AKLNQIKEGGEKGNGSSEEAAASSEGGSHGDDSHQQWVANV 222
           AKLNQIKEGGEKGNGSSEEAAASSEGGSHGDDSHQQWVANV
Sbjct: 181 AKLNQIKEGGEKGNGSSEEAAASSEGGSHGDDSHQQWVANV 221

[Close]

BLAST of CSPI03G00990 vs. NCBI nr
Match: XP_008448584.1 (PREDICTED: 54S ribosomal protein L24, mitochondrial [Cucumis melo] >XP_008448585.1 PREDICTED: 54S ribosomal protein L24, mitochondrial [Cucumis melo] >XP_008448586.1 PREDICTED: 54S ribosomal protein L24, mitochondrial [Cucumis melo] >XP_008448587.1 PREDICTED: 54S ribosomal protein L24, mitochondrial [Cucumis melo] >XP_008448588.1 PREDICTED: 54S ribosomal protein L24, mitochondrial [Cucumis melo])

HSP 1 Score: 388.7 bits (997), Expect = 3.5e-104
Identity = 205/223 (91.93%), Postives = 212/223 (95.07%), Query Frame = 0


Query: 1   MAFRGKEMMKKILKKVGENNLAPGVKDSLKKCIPDSKIVMGRANRGIYAGRHIRFGNRVS 60
           MAFRGKEMMKKILKKVGENNLAPGVK+SLKK +PDSKIVMGRANRGIYAGRHIRFGNRVS
Sbjct: 1   MAFRGKEMMKKILKKVGENNLAPGVKESLKKWVPDSKIVMGRANRGIYAGRHIRFGNRVS 60

Query: 61  EDGGNKSRRNWKPNVQEKRLFSYILDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMD 120
           EDGGNKSRR WKPNVQEKRLFSYILDRHIRVKVTTHALRCIDKAGGIDEYLLKTPY KMD
Sbjct: 61  EDGGNKSRRKWKPNVQEKRLFSYILDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYQKMD 120

Query: 121 TELGLFWKSKIETLYEELGKMEVVFFSPEDEVKFEQRFKELKLSERAARREARRQMYGSS 180
           TELGLFWK+KIETLYEELGKMEVVFFSPEDE KFEQRFK+LKLSERAAR+EARR++YGSS
Sbjct: 121 TELGLFWKAKIETLYEELGKMEVVFFSPEDEAKFEQRFKDLKLSERAARKEARRKIYGSS 180

Query: 181 A-KLNQIKEGGEKGNGSSEEAAASSEGGSHG-DDSHQQWVANV 222
             KLNQIKEGGE  N SSEE AASSEGGSHG DDSHQQWVANV
Sbjct: 181 TNKLNQIKEGGEDTNVSSEE-AASSEGGSHGDDDSHQQWVANV 222

[Close]

BLAST of CSPI03G00990 vs. NCBI nr
Match: XP_038876561.1 (uncharacterized protein LOC120068991 [Benincasa hispida])

HSP 1 Score: 381.7 bits (979), Expect = 4.3e-102
Identity = 197/220 (89.55%), Postives = 207/220 (94.09%), Query Frame = 0


Query: 1   MAFRGKEMMKKILKKVGENNLAPGVKDSLKKCIPDSKIVMGRANRGIYAGRHIRFGNRVS 60
           MAFRGKEMMKKILKKVGE NLAPGVKDSLKKCIPDSKIVM RANRGIYAGRHIRFGNRVS
Sbjct: 1   MAFRGKEMMKKILKKVGEKNLAPGVKDSLKKCIPDSKIVMNRANRGIYAGRHIRFGNRVS 60

Query: 61  EDGGNKSRRNWKPNVQEKRLFSYILDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMD 120
           EDGGNKSRR+WKPNVQEKRLFSYILDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMD
Sbjct: 61  EDGGNKSRRSWKPNVQEKRLFSYILDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMD 120

Query: 121 TELGLFWKSKIETLYEELGKMEVVFFSPEDEVKFEQRFKELKLSERAARREARRQMYGSS 180
           TE+GLFWK+KIE +YEELG+MEVVFFSPEDE KFEQ F+ELKL+ERAAR+EARRQMYGSS
Sbjct: 121 TEIGLFWKTKIEKMYEELGQMEVVFFSPEDEAKFEQGFRELKLTERAARKEARRQMYGSS 180

Query: 181 AKLNQIKEGGEKGNGSSEEAAASSEGGSHGDDSHQQWVAN 221
            K +QIKEG E  +GSSEE AASSEGGSHGDD HQQ VAN
Sbjct: 181 TKHDQIKEGQEDRHGSSEE-AASSEGGSHGDDGHQQKVAN 219

[Close]

BLAST of CSPI03G00990 vs. NCBI nr
Match: XP_022923524.1 (uncharacterized protein LOC111431195 [Cucurbita moschata])

HSP 1 Score: 366.3 bits (939), Expect = 1.9e-97
Identity = 189/220 (85.91%), Postives = 202/220 (91.82%), Query Frame = 0


Query: 1   MAFRGKEMMKKILKKVGENNLAPGVKDSLKKCIPDSKIVMGRANRGIYAGRHIRFGNRVS 60
           MAFRGKEMMKKILKKVGENNLAPGVKDSLKKCIPDSKIVM RA RGI+AGRHI+FGNR+S
Sbjct: 1   MAFRGKEMMKKILKKVGENNLAPGVKDSLKKCIPDSKIVMNRAKRGIFAGRHIQFGNRIS 60

Query: 61  EDGGNKSRRNWKPNVQEKRLFSYILDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMD 120
           EDGGNKSRRNWKPNVQEKRLFSYILDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMD
Sbjct: 61  EDGGNKSRRNWKPNVQEKRLFSYILDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMD 120

Query: 121 TELGLFWKSKIETLYEELGKMEVVFFSPEDEVKFEQRFKELKLSERAARREARRQMYGSS 180
           TE+GLFWK+KIE LYEELG+MEVVFFSPEDE KFEQ F++LKLSERAAR+EARR+MYGSS
Sbjct: 121 TEIGLFWKAKIEKLYEELGQMEVVFFSPEDEAKFEQGFRDLKLSERAARKEARRRMYGSS 180

Query: 181 AKLNQIKEGGEKGNGSSEEAAASSEGGSHGDDSHQQWVAN 221
            + +QI+EG     GSSEE  A SEGGSHGDD  QQ VAN
Sbjct: 181 TQHDQIEEGQADRAGSSEE-VAGSEGGSHGDDGPQQCVAN 219

[Close]

BLAST of CSPI03G00990 vs. NCBI nr
Match: KAG6577758.1 (hypothetical protein SDJN03_25332, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 364.0 bits (933), Expect = 9.2e-97
Identity = 188/220 (85.45%), Postives = 201/220 (91.36%), Query Frame = 0


Query: 1   MAFRGKEMMKKILKKVGENNLAPGVKDSLKKCIPDSKIVMGRANRGIYAGRHIRFGNRVS 60
           MAFRGKEMMKKILKKVGENNLAPGVKDSLKKCIPDSKIVM RA RGI+AGRHI+FGNR+S
Sbjct: 1   MAFRGKEMMKKILKKVGENNLAPGVKDSLKKCIPDSKIVMNRAKRGIFAGRHIQFGNRIS 60

Query: 61  EDGGNKSRRNWKPNVQEKRLFSYILDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMD 120
           EDGGNKSRRNWKPNVQEKRLFSYILDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMD
Sbjct: 61  EDGGNKSRRNWKPNVQEKRLFSYILDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMD 120

Query: 121 TELGLFWKSKIETLYEELGKMEVVFFSPEDEVKFEQRFKELKLSERAARREARRQMYGSS 180
           TE+GLFWK+KIE LYEELG+MEVVFFSPEDE KFEQ F++LKLSERAAR+EARR+MYGS 
Sbjct: 121 TEIGLFWKAKIEKLYEELGQMEVVFFSPEDEAKFEQGFRDLKLSERAARKEARRRMYGSL 180

Query: 181 AKLNQIKEGGEKGNGSSEEAAASSEGGSHGDDSHQQWVAN 221
            + +QI+EG     GSSEE  A SEGGSHGDD  QQ VAN
Sbjct: 181 TQHDQIEEGQADRAGSSEE-VAGSEGGSHGDDGPQQCVAN 219

[Close]

BLAST of CSPI03G00990 vs. TAIR 10
Match: AT4G31460.1 (Ribosomal L28 family )

HSP 1 Score: 282.7 bits (722), Expect = 2.5e-76
Identity = 143/216 (66.20%), Postives = 171/216 (79.17%), Query Frame = 0


Query: 1   MAFRGKEMMKKILKKVGENNLAPGVKDSLKKCIPDSKIVMGRANRGIYAGRHIRFGNRVS 60
           MAFRGKEMMKK++KKVG  N+ P +K+ LK C+PD+K+VMGRA RG+YAGRHI++GNRVS
Sbjct: 1   MAFRGKEMMKKLVKKVGAENITPELKEKLKACVPDTKVVMGRAKRGLYAGRHIQYGNRVS 60

Query: 61  EDGGNKSRRNWKPNVQEKRLFSYILDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMD 120
           EDGGNKSRR WKPNVQEKRLFSYI D HI+VKVTTHALRCIDKAGGIDEYLLKTPY KMD
Sbjct: 61  EDGGNKSRRCWKPNVQEKRLFSYIFDSHIKVKVTTHALRCIDKAGGIDEYLLKTPYQKMD 120

Query: 121 TELGLFWKSKIETLYEELGKMEVVFFSPEDEVKFEQRFKELKLSERAARREARRQMYGSS 180
           TE+GL+WK+K+E  Y ELG+MEV FF+PEDE K EQ FK+L ++++ ARREARR      
Sbjct: 121 TEMGLYWKTKVEARYAELGQMEVAFFNPEDEAKLEQGFKDLNIAKKDARREARRTF---- 180

Query: 181 AKLNQIKEGGEKGNGSSEEAAASSEGGSHGDDSHQQ 217
                     +KG G+  +  AS EGG  G +SHQ+
Sbjct: 181 ---------RKKGGGNKGDEEASIEGGG-GSESHQE 202

The following BLAST results are available for this feature:

BLAST of CSPI03G00990 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P36525	3.3e-12	39.09	54S ribosomal protein L24, mitochondrial OS=Saccharomyces cerevisiae (strain ATC...	[more]
A0L5U1	3.4e-09	43.66	50S ribosomal protein L28 OS=Magnetococcus marinus (strain ATCC BAA-1437 / JCM 1...	[more]
A9HS05	5.7e-09	42.47	50S ribosomal protein L28 OS=Gluconacetobacter diazotrophicus (strain ATCC 49037...	[more]
Q5FUP5	9.8e-09	42.47	50S ribosomal protein L28 OS=Gluconobacter oxydans (strain 621H) OX=290633 GN=rp...	[more]
B6IW31	6.3e-08	39.73	50S ribosomal protein L28 OS=Rhodospirillum centenum (strain ATCC 51521 / SW) OX...	[more]

BLAST of CSPI03G00990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L1P8	3.5e-118	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G005030 PE=3 SV=1	[more]
A0A1S3BK21	1.7e-104	91.93	54S ribosomal protein L24, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103490718...	[more]
A0A6J1E6M9	9.0e-98	85.91	uncharacterized protein LOC111431195 OS=Cucurbita moschata OX=3662 GN=LOC1114311...	[more]
A0A6J1CUG4	2.2e-96	82.73	uncharacterized protein LOC111014872 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A6J1HLI0	2.1e-94	85.85	uncharacterized protein LOC111465250 OS=Cucurbita maxima OX=3661 GN=LOC111465250...	[more]

BLAST of CSPI03G00990 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146126.1	7.2e-118	100.00	54S ribosomal protein L24, mitochondrial [Cucumis sativus] >KGN55688.1 hypotheti...	[more]
XP_008448584.1	3.5e-104	91.93	PREDICTED: 54S ribosomal protein L24, mitochondrial [Cucumis melo] >XP_008448585...	[more]
XP_038876561.1	4.3e-102	89.55	uncharacterized protein LOC120068991 [Benincasa hispida]	[more]
XP_022923524.1	1.9e-97	85.91	uncharacterized protein LOC111431195 [Cucurbita moschata]	[more]
KAG6577758.1	9.2e-97	85.45	hypothetical protein SDJN03_25332, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CSPI03G00990 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G31460.1	2.5e-76	66.20	Ribosomal L28 family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR037147	Ribosomal protein L28/L24 superfamily	GENE3D	2.30.170.40	Ribosomal protein L28/L24	coord: 48..118 e-value: 3.8E-21 score: 76.8
IPR026569	Ribosomal protein L28/L24	PFAM	PF00830	Ribosomal_L28	coord: 48..104 e-value: 6.6E-19 score: 67.8
IPR026569	Ribosomal protein L28/L24	PANTHER	PTHR13528	39S RIBOSOMAL PROTEIN L28, MITOCHONDRIAL	coord: 1..212
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 197..221
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 174..221
None	No IPR available	PANTHER	PTHR13528:SF11	BNAC03G67590D PROTEIN	coord: 1..212
IPR001383	Ribosomal protein L28	HAMAP	MF_00373	Ribosomal_L28	coord: 40..110 score: 14.015499
IPR034704	L28p-like	SUPERFAMILY	143800	L28p-like	coord: 43..119

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G00990.1	CSPI03G00990.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005762	mitochondrial large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003735	structural constituent of ribosome