CSPI03G00570 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G00570
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	RING-type domain-containing protein
Location	Chr3: 413746 .. 414640 (-)
RNA-Seq Expression	CSPI03G00570
Synteny	CSPI03G00570

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGTAACTCTCTTGTTTAGGTAGCAACCGCTTTGTGTATGACTCATTACTATCCTTCTTCTTCACCAATCCAACCACTTCTAACCCACGCAAGAATTGCTCTCTTTTTCTCCTCTAATCTCATCTTCCTTTTCATTAAAAAAAAAAAAAAAACATCTCTAGCTAGCTAATGACTTCCAAATCTCTTCATTGATGACAAATAATGATTTTCAACAAGGTCTTCTTCTTCTTCTACAACAACCTCATTGGCTTCCGGAGCCGGCCAAGATTCAAGCAAGCAACCCCGCTTCCCCGCAGTGGCAATTCGAGCCTTCGACCTTTGCCAACTGATGATTGTACTATCTTAGCTCTTTCGAGCCTCGAGAAGGCGTTGGAGGGCGAGACATGTTGCGTGTGCTTGTCAAGTATGGGAAACACAGACAGGGATGGAGATAAGGGTGTTGGCACAAGTGTTCTTCCTTGTTTGCATGAGTTTCATAAGGTATGCGTGGAACGGTGGTTCGAAGAGTGTCGTAGAACTTGTCCGATATGTCGATATTCGATGGAAGGAGGAGGTAGTCATGAAGATGAGACTAATCAAATACTCACTGATGAGATGGTGATATGGTTTTCTTCTTTTCATACCTCTGGTTTTTGAGCTGTTTTGATTTGTTAGTTACATCTACTAAAAGCTTTCAAGCTTTTGCAAAAGTGCTTCCTTTGTACAAGGTTAAATCTTCATGATTTTGATTAATGTCATTTGGATGGCTCTAGCTTCACAATATCACTGTTGAGAATATCTTTTTTTCCGTTTAAAAATAAAGTTAGTCTGTAGAAAAGAAGTGGAACCATTCAAATTTATGTCTAATCTCTAATGTTGTGGGAAAAGGGAAAAATTCATAATTAGATAAAGTAC

mRNA sequence

AAAGTAACTCTCTTGTTTAGGTAGCAACCGCTTTGTGTATGACTCATTACTATCCTTCTTCTTCACCAATCCAACCACTTCTAACCCACGCAAGAATTGCTCTCTTTTTCTCCTCTAATCTCATCTTCCTTTTCATTAAAAAAAAAAAAAAAACATCTCTAGCTAGCTAATGACTTCCAAATCTCTTCATTGATGACAAATAATGATTTTCAACAAGGTCTTCTTCTTCTTCTACAACAACCTCATTGGCTTCCGGAGCCGGCCAAGATTCAAGCAAGCAACCCCGCTTCCCCGCAGTGGCAATTCGAGCCTTCGACCTTTGCCAACTGATGATTGTACTATCTTAGCTCTTTCGAGCCTCGAGAAGGCGTTGGAGGGCGAGACATGTTGCGTGTGCTTGTCAAGTATGGGAAACACAGACAGGGATGGAGATAAGGGTGTTGGCACAAGTGTTCTTCCTTGTTTGCATGAGTTTCATAAGGTATGCGTGGAACGGTGGTTCGAAGAGTGTCGTAGAACTTGTCCGATATGTCGATATTCGATGGAAGGAGGAGGTAGTCATGAAGATGAGACTAATCAAATACTCACTGATGAGATGGTGATATGGTTTTCTTCTTTTCATACCTCTGGTTTTTGAGCTGTTTTGATTTGTTAGTTACATCTACTAAAAGCTTTCAAGCTTTTGCAAAAGTGCTTCCTTTGTACAAGGTTAAATCTTCATGATTTTGATTAATGTCATTTGGATGGCTCTAGCTTCACAATATCACTGTTGAGAATATCTTTTTTTCCGTTTAAAAATAAAGTTAGTCTGTAGAAAAGAAGTGGAACCATTCAAATTTATGTCTAATCTCTAATGTTGTGGGAAAAGGGAAAAATTCATAATTAGATAAAGTAC

Coding sequence (CDS)

ATGATTTTCAACAAGGTCTTCTTCTTCTTCTACAACAACCTCATTGGCTTCCGGAGCCGGCCAAGATTCAAGCAAGCAACCCCGCTTCCCCGCAGTGGCAATTCGAGCCTTCGACCTTTGCCAACTGATGATTGTACTATCTTAGCTCTTTCGAGCCTCGAGAAGGCGTTGGAGGGCGAGACATGTTGCGTGTGCTTGTCAAGTATGGGAAACACAGACAGGGATGGAGATAAGGGTGTTGGCACAAGTGTTCTTCCTTGTTTGCATGAGTTTCATAAGGTATGCGTGGAACGGTGGTTCGAAGAGTGTCGTAGAACTTGTCCGATATGTCGATATTCGATGGAAGGAGGAGGTAGTCATGAAGATGAGACTAATCAAATACTCACTGATGAGATGGTGATATGGTTTTCTTCTTTTCATACCTCTGGTTTTTGA

Protein sequence

MIFNKVFFFFYNNLIGFRSRPRFKQATPLPRSGNSSLRPLPTDDCTILALSSLEKALEGETCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEGGGSHEDETNQILTDEMVIWFSSFHTSGF*

Homology

[Close]

BLAST of CSPI03G00570 vs. ExPASy Swiss-Prot
Match: Q91XF4 (E3 ubiquitin-protein ligase RNF167 OS=Mus musculus OX=10090 GN=Rnf167 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 4.9e-09
Identity = 32/101 (31.68%), Postives = 46/101 (45.54%), Query Frame = 0


Query: 31  RSGNSSLRPLPTDDCTILALSSLEKALEGETCCVCLSSMGNTDRDGDKGVGTSVLPCLHE 90
           R     L+ +PT D         +K  E + C +CL        DGDK     VLPC H 
Sbjct: 207 RLTKEQLKQIPTHD--------YQKGDEYDVCAICLDEY----EDGDK---LRVLPCAHA 266

Query: 91  FHKVCVERWFEECRRTCPICRYSMEGGGSHEDETNQILTDE 132
           +H  CV+ W  + R+TCPIC+  +  G   E++  +    E
Sbjct: 267 YHSRCVDPWLTQTRKTCPICKQPVHRGPGDEEQEEETQEQE 292

[Close]

BLAST of CSPI03G00570 vs. ExPASy Swiss-Prot
Match: Q9H6Y7 (E3 ubiquitin-protein ligase RNF167 OS=Homo sapiens OX=9606 GN=RNF167 PE=1 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 6.4e-09
Identity = 31/96 (32.29%), Postives = 45/96 (46.88%), Query Frame = 0


Query: 31  RSGNSSLRPLPTDDCTILALSSLEKALEGETCCVCLSSMGNTDRDGDKGVGTSVLPCLHE 90
           R     L+ +PT D         +K  + + C +CL        DGDK     VLPC H 
Sbjct: 207 RLTKEQLKQIPTHD--------YQKGDQYDVCAICLDEY----EDGDK---LRVLPCAHA 266

Query: 91  FHKVCVERWFEECRRTCPICRYSMEGGGSHEDETNQ 127
           +H  CV+ W  + R+TCPIC+  +  G   ED+  +
Sbjct: 267 YHSRCVDPWLTQTRKTCPICKQPVHRGPGDEDQEEE 287

[Close]

BLAST of CSPI03G00570 vs. ExPASy Swiss-Prot
Match: Q5XIL0 (E3 ubiquitin-protein ligase RNF167 OS=Rattus norvegicus OX=10116 GN=Rnf167 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.1e-08
Identity = 30/96 (31.25%), Postives = 45/96 (46.88%), Query Frame = 0


Query: 31  RSGNSSLRPLPTDDCTILALSSLEKALEGETCCVCLSSMGNTDRDGDKGVGTSVLPCLHE 90
           R     L+ +PT D         +K  E + C +CL        DGDK     +LPC H 
Sbjct: 207 RLTKEQLKQIPTHD--------YQKGDEYDVCAICLDEY----EDGDK---LRILPCAHA 266

Query: 91  FHKVCVERWFEECRRTCPICRYSMEGGGSHEDETNQ 127
           +H  CV+ W  + R+TCPIC+  +  G   E++  +
Sbjct: 267 YHSRCVDPWLTQTRKTCPICKQPVHRGPGDEEQEEE 287

[Close]

BLAST of CSPI03G00570 vs. ExPASy Swiss-Prot
Match: Q9M2S6 (E3 ubiquitin-protein ligase SDIR1 OS=Arabidopsis thaliana OX=3702 GN=SDIR1 PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 6.0e-07
Identity = 30/105 (28.57%), Postives = 47/105 (44.76%), Query Frame = 0


Query: 30  PRSGNSSLRPLPTDDCTILALSSLEKALEGE----TCCVCLSSMGNTDRDGDKGVGTSVL 89
           P +G S  +   T       L S  ++ +G     TC VCL  +         G     L
Sbjct: 175 PENGCSLAKQASTSSSAEKMLDSANESKKGTEDELTCSVCLEQV-------TVGEIVRTL 234

Query: 90  PCLHEFHKVCVERWFEECRRTCPICRYSMEGGGSHEDETNQILTD 131
           PCLH+FH  C++ W  + + TCP+C++    G   +DE +   +D
Sbjct: 235 PCLHQFHAGCIDPWLRQ-QGTCPVCKFRAHSGWQEQDEIDDDASD 271

[Close]

BLAST of CSPI03G00570 vs. ExPASy Swiss-Prot
Match: Q8BP31 (RING finger protein 122 OS=Mus musculus OX=10090 GN=Rnf122 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 7.8e-07
Identity = 29/77 (37.66%), Postives = 39/77 (50.65%), Query Frame = 0


Query: 57  LEGETCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEG 116
           L G+TC VCL      D  G       VLPC H FH+ C+ +W  E R  CP+C   +  
Sbjct: 88  LYGQTCAVCLEDFKGKDELG-------VLPCQHAFHRKCLVKWL-EVRCVCPMCNKPI-A 147

Query: 117 GGSHEDETNQILTDEMV 134
           G +   ++  IL DE+V
Sbjct: 148 GPTETSQSIGILLDELV 155

[Close]

BLAST of CSPI03G00570 vs. ExPASy TrEMBL
Match: A0A0A0L4W7 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G002620 PE=4 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 6.5e-81
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0


Query: 1   MIFNKVFFFFYNNLIGFRSRPRFKQATPLPRSGNSSLRPLPTDDCTILALSSLEKALEGE 60
           MIFNKVFFFFYNNLIGFRSRPRFKQATPLPRSGNSSLRPLPTDDCTILALSSLEKALEGE
Sbjct: 1   MIFNKVFFFFYNNLIGFRSRPRFKQATPLPRSGNSSLRPLPTDDCTILALSSLEKALEGE 60

Query: 61  TCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEGGGSH 120
           TCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEGGGSH
Sbjct: 61  TCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEGGGSH 120

Query: 121 EDETNQILTDEMVIWFSSFHTSGF 145
           EDETNQILTDEMVIWFSSFHTSGF
Sbjct: 121 EDETNQILTDEMVIWFSSFHTSGF 144

[Close]

BLAST of CSPI03G00570 vs. ExPASy TrEMBL
Match: A0A5D3CJ45 (E3 ubiquitin-protein ligase RNF13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00530 PE=4 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 1.3e-73
Identity = 137/149 (91.95%), Postives = 140/149 (93.96%), Query Frame = 0


Query: 1   MIFNKVFFFFYNNLIGFRSRP-RFKQATPLPRSGNSSLRPLPTDDCTILALSSLEKALEG 60
           M+FNKVFFFFYNN IGFRSRP RFKQATPLP  GNSSLRP+PTDDCTI+ALSSLEKALEG
Sbjct: 1   MVFNKVFFFFYNNFIGFRSRPTRFKQATPLPHGGNSSLRPMPTDDCTIIALSSLEKALEG 60

Query: 61  ETCCVCLSSMGNTDRDGDKGV--GTSVLPCLHEFHKVCVERWFEECRRTCPICRYSME-- 120
           ETCCVCLSSMGNTD DGDKGV  GTSVLPCLHEFHKVCVERWFEECRRTCPICRYSME  
Sbjct: 61  ETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEGG 120

Query: 121 GGGSHEDETNQILTDEMVIWFSSFHTSGF 145
           GGGSHEDETNQILTDEMVIWFSSFHTSGF
Sbjct: 121 GGGSHEDETNQILTDEMVIWFSSFHTSGF 149

[Close]

BLAST of CSPI03G00570 vs. ExPASy TrEMBL
Match: A0A6J1CW69 (E3 ubiquitin-protein ligase SDIR1-like OS=Momordica charantia OX=3673 GN=LOC111014786 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 5.8e-45
Identity = 97/148 (65.54%), Postives = 111/148 (75.00%), Query Frame = 0


Query: 1   MIFNKVFFFFYNNLIGFRSRPRFKQATPLPRSGNSSLRPLPTDDCTI---LALSSLEKAL 60
           M+FN+VFFFFY N IGFR RP+ KQ T LP  G+S+LR +  D+  I   + LSS  KAL
Sbjct: 1   MVFNRVFFFFY-NFIGFRGRPKLKQKTLLPHGGDSTLRQMVEDESRIPDCVTLSSSGKAL 60

Query: 61  EGE-TCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEG 120
           EGE  CCVCLSS+       ++G+ TSVLPCLHEFHKVCV+RWFEE RRTCPICRYSMEG
Sbjct: 61  EGEMCCCVCLSSI-------EEGIETSVLPCLHEFHKVCVDRWFEERRRTCPICRYSMEG 120

Query: 121 GGSHEDETNQILTDEMVIWFSSFHTSGF 145
            G   +   QILTDEMVIWFSSFHTSGF
Sbjct: 121 AGQGNENGTQILTDEMVIWFSSFHTSGF 140

[Close]

BLAST of CSPI03G00570 vs. ExPASy TrEMBL
Match: A0A7N2R4T7 (RING-type domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 1.6e-26
Identity = 70/149 (46.98%), Postives = 93/149 (62.42%), Query Frame = 0


Query: 1   MIFNKVFFFFYNNLIG----FRSRPRFKQATPLPRSGNSSLRPLPTDDCTILALSSLEKA 60
           M+F K+  F YN+LIG     R++P F +A  L       L  +  D+  +     +E  
Sbjct: 1   MVFKKLVCFIYNHLIGNGDHLRAQPTFWEAPSL-------LHKVSLDEVEVEV--EVEVE 60

Query: 61  LEGETCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEE-CRRTCPICRYSME 120
           +EGE CCVCLS +    + G + + T  LPCLHEFHK+CV+RWF   CR+TCP+CR+SM 
Sbjct: 61  VEGEVCCVCLSRL----KKGQEEMRT--LPCLHEFHKICVDRWFNHVCRKTCPVCRFSM- 120

Query: 121 GGGSHEDETNQILTDEMVIWFSSFHTSGF 145
            GG  +  T Q+LTDEMVIWFSSFH +GF
Sbjct: 121 -GGEDKFHTQQVLTDEMVIWFSSFHVAGF 132

[Close]

BLAST of CSPI03G00570 vs. ExPASy TrEMBL
Match: A0A6A1UIA7 (Protein preY, mitochondrial OS=Morella rubra OX=262757 GN=CJ030_MR0G008870 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 4.3e-24
Identity = 69/139 (49.64%), Postives = 83/139 (59.71%), Query Frame = 0


Query: 14  LIGFRSRPRFKQATPLPRSGNSSLRPLPTD----DCTILA---LSSLEKALEGE-TCCVC 73
           LIG R++P  K+A   P S  S +     D    D T+ A    SS  +  EGE  CCVC
Sbjct: 101 LIGLRAQPALKEA---PSSSYSVINWDDLDEVKEDPTMSARGSSSSSGEVHEGEQQCCVC 160

Query: 74  LSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEGGGSHEDETN 133
           LS +        KG  T +LPCLHEFHKVCV+RWF  CR+TCP+CR+SM  GG       
Sbjct: 161 LSRL-------KKGQDTRILPCLHEFHKVCVDRWFNSCRKTCPVCRFSM--GGEDNCRVQ 220

Query: 134 QILTDEMVIWFSSFHTSGF 145
           + LTDEMVIWFSSFH +GF
Sbjct: 221 EALTDEMVIWFSSFHVAGF 227

[Close]

BLAST of CSPI03G00570 vs. NCBI nr
Match: KAE8649999.1 (hypothetical protein Csa_010276, partial [Cucumis sativus])

HSP 1 Score: 299.7 bits (766), Expect = 1.4e-77
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 6   VFFFFYNNLIGFRSRPRFKQATPLPRSGNSSLRPLPTDDCTILALSSLEKALEGETCCVC 65
           VFFFFYNNLIGFRSRPRFKQATPLPRSGNSSLRPLPTDDCTILALSSLEKALEGETCCVC
Sbjct: 1   VFFFFYNNLIGFRSRPRFKQATPLPRSGNSSLRPLPTDDCTILALSSLEKALEGETCCVC 60

Query: 66  LSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEGGGSHEDETN 125
           LSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEGGGSHEDETN
Sbjct: 61  LSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEGGGSHEDETN 120

Query: 126 QILTDEMVIWFSSFHTSGF 145
           QILTDEMVIWFSSFHTSGF
Sbjct: 121 QILTDEMVIWFSSFHTSGF 139

[Close]

BLAST of CSPI03G00570 vs. NCBI nr
Match: KAA0052944.1 (E3 ubiquitin-protein ligase RNF13 [Cucumis melo var. makuwa] >TYK11400.1 E3 ubiquitin-protein ligase RNF13 [Cucumis melo var. makuwa])

HSP 1 Score: 285.4 bits (729), Expect = 2.7e-73
Identity = 137/149 (91.95%), Postives = 140/149 (93.96%), Query Frame = 0


Query: 1   MIFNKVFFFFYNNLIGFRSRP-RFKQATPLPRSGNSSLRPLPTDDCTILALSSLEKALEG 60
           M+FNKVFFFFYNN IGFRSRP RFKQATPLP  GNSSLRP+PTDDCTI+ALSSLEKALEG
Sbjct: 1   MVFNKVFFFFYNNFIGFRSRPTRFKQATPLPHGGNSSLRPMPTDDCTIIALSSLEKALEG 60

Query: 61  ETCCVCLSSMGNTDRDGDKGV--GTSVLPCLHEFHKVCVERWFEECRRTCPICRYSME-- 120
           ETCCVCLSSMGNTD DGDKGV  GTSVLPCLHEFHKVCVERWFEECRRTCPICRYSME  
Sbjct: 61  ETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEGG 120

Query: 121 GGGSHEDETNQILTDEMVIWFSSFHTSGF 145
           GGGSHEDETNQILTDEMVIWFSSFHTSGF
Sbjct: 121 GGGSHEDETNQILTDEMVIWFSSFHTSGF 149

[Close]

BLAST of CSPI03G00570 vs. NCBI nr
Match: XP_038906276.1 (E3 ubiquitin-protein ligase RNF167-like [Benincasa hispida])

HSP 1 Score: 263.5 bits (672), Expect = 1.1e-66
Identity = 124/146 (84.93%), Postives = 129/146 (88.36%), Query Frame = 0


Query: 1   MIFNKVFFFFYNNLIGFRSRPRFKQATPLPRSGNSSLRPLPTDDCTILALSSLEKALEGE 60
           M+FNKVFFFFYNN +GFRSR R KQATPLP  GN SLRP+  DDC I+ LSS EKALEGE
Sbjct: 1   MVFNKVFFFFYNNFMGFRSRLRCKQATPLPHGGNLSLRPITPDDCAIVTLSSPEKALEGE 60

Query: 61  TCCVCLSSMGNTDRDGDKGVG--TSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEGGG 120
           TCCVCLSSMGN D D DKGVG  TSVLPCLHEFHKVCV+RWFEECRRTCPICRYSMEGGG
Sbjct: 61  TCCVCLSSMGNKDGDRDKGVGTSTSVLPCLHEFHKVCVDRWFEECRRTCPICRYSMEGGG 120

Query: 121 SHEDETNQILTDEMVIWFSSFHTSGF 145
           SHED TNQILTDEMVIWFSSFHTSGF
Sbjct: 121 SHEDGTNQILTDEMVIWFSSFHTSGF 146

[Close]

BLAST of CSPI03G00570 vs. NCBI nr
Match: KAG6577791.1 (Protein goliath, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 243.8 bits (621), Expect = 9.1e-61
Identity = 113/145 (77.93%), Postives = 129/145 (88.97%), Query Frame = 0


Query: 1   MIFNKVFFFFYNNLIGFRSRPRFKQATPLPRSGNSSLRPLPTDDCTILALSSLEKALEGE 60
           M+FNK+FFFFYNNLIGFR+ P  KQATPLPRS +SSLRP+  DDC + ALSS EKALEGE
Sbjct: 1   MVFNKLFFFFYNNLIGFRTSPTLKQATPLPRSADSSLRPMTPDDC-VAALSSPEKALEGE 60

Query: 61  TCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEGGG-S 120
           TCCVCLS MGN D+  D+G+GTSVLPC HEFHK+C++RWFEECRRTCPICRYSMEGGG +
Sbjct: 61  TCCVCLSCMGNKDK--DEGIGTSVLPCSHEFHKICLDRWFEECRRTCPICRYSMEGGGNN 120

Query: 121 HEDETNQILTDEMVIWFSSFHTSGF 145
           HED +N++LTDEMVIWFSSFHTSGF
Sbjct: 121 HEDGSNEMLTDEMVIWFSSFHTSGF 142

[Close]

BLAST of CSPI03G00570 vs. NCBI nr
Match: KAG7015830.1 (Protein goliath, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 242.7 bits (618), Expect = 2.0e-60
Identity = 113/145 (77.93%), Postives = 128/145 (88.28%), Query Frame = 0


Query: 1   MIFNKVFFFFYNNLIGFRSRPRFKQATPLPRSGNSSLRPLPTDDCTILALSSLEKALEGE 60
           M+FNK+FFFFYNNLIGFR+ P  KQATPLPRS +SSLRP   DDC + ALSS EKALEGE
Sbjct: 1   MVFNKLFFFFYNNLIGFRTSPTLKQATPLPRSADSSLRPTTPDDC-VAALSSPEKALEGE 60

Query: 61  TCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEGGG-S 120
           TCCVCLS MGN D+  D+G+GTSVLPC HEFHK+C++RWFEECRRTCPICRYSMEGGG +
Sbjct: 61  TCCVCLSCMGNKDK--DEGIGTSVLPCSHEFHKICLDRWFEECRRTCPICRYSMEGGGNN 120

Query: 121 HEDETNQILTDEMVIWFSSFHTSGF 145
           HED +N++LTDEMVIWFSSFHTSGF
Sbjct: 121 HEDGSNEMLTDEMVIWFSSFHTSGF 142

[Close]

BLAST of CSPI03G00570 vs. TAIR 10
Match: AT3G51325.1 (RING/U-box superfamily protein )

HSP 1 Score: 70.9 bits (172), Expect = 9.8e-13
Identity = 36/84 (42.86%), Postives = 45/84 (53.57%), Query Frame = 0


Query: 58  EGETCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRR-TCPICRYSMEG 117
           E E C VCL  M   D           LPC HEFH +CV+ WF   R+  CP+CR+S   
Sbjct: 22  EEECCSVCLMRMEAKD-------VIKSLPCSHEFHSLCVDTWFNVSRKICCPLCRFS--- 81

Query: 118 GGSHEDETNQILTDEMVIWFSSFH 141
                  T  +LTDE+++WFSSFH
Sbjct: 82  ------PTTILLTDELLLWFSSFH 89

[Close]

BLAST of CSPI03G00570 vs. TAIR 10
Match: AT3G55530.1 (RING/U-box superfamily protein )

HSP 1 Score: 55.5 bits (132), Expect = 4.3e-08
Identity = 30/105 (28.57%), Postives = 47/105 (44.76%), Query Frame = 0


Query: 30  PRSGNSSLRPLPTDDCTILALSSLEKALEGE----TCCVCLSSMGNTDRDGDKGVGTSVL 89
           P +G S  +   T       L S  ++ +G     TC VCL  +         G     L
Sbjct: 175 PENGCSLAKQASTSSSAEKMLDSANESKKGTEDELTCSVCLEQV-------TVGEIVRTL 234

Query: 90  PCLHEFHKVCVERWFEECRRTCPICRYSMEGGGSHEDETNQILTD 131
           PCLH+FH  C++ W  + + TCP+C++    G   +DE +   +D
Sbjct: 235 PCLHQFHAGCIDPWLRQ-QGTCPVCKFRAHSGWQEQDEIDDDASD 271

[Close]

BLAST of CSPI03G00570 vs. TAIR 10
Match: AT4G32600.1 (RING/U-box superfamily protein )

HSP 1 Score: 54.7 bits (130), Expect = 7.3e-08
Identity = 30/79 (37.97%), Postives = 43/79 (54.43%), Query Frame = 0


Query: 54  EKALEGE--TCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRRTCPICR 113
           E+A+ GE   CC+CL+   N +           LPC H FHK CV++W  +   +CP+C+
Sbjct: 353 ERAISGEDAVCCICLAKYANNEE-------LRELPCSHFFHKECVDKWL-KINASCPLCK 412

Query: 114 YSMEGGGSHEDETNQ-ILT 130
              E G  + D T+Q ILT
Sbjct: 413 --SEVGEKNSDLTSQGILT 421

[Close]

BLAST of CSPI03G00570 vs. TAIR 10
Match: AT5G45290.1 (RING/U-box superfamily protein )

HSP 1 Score: 54.7 bits (130), Expect = 7.3e-08
Identity = 26/75 (34.67%), Postives = 36/75 (48.00%), Query Frame = 0


Query: 39  PLPTD--DCTILALSSLEKALEGETCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCV 98
           P P D  D   + L +  ++ +   C +CL      D           LPC HEFHK CV
Sbjct: 465 PAPNDVVDLLPIKLYTKSQSEDPSQCYICLVEYEEAD-------SIRTLPCHHEFHKTCV 524

Query: 99  ERWFEECRRTCPICR 112
           ++W +E  R CP+CR
Sbjct: 525 DKWLKEIHRVCPLCR 532

[Close]

BLAST of CSPI03G00570 vs. TAIR 10
Match: AT1G35630.1 (Protease-associated (PA) RING/U-box zinc finger family protein )

HSP 1 Score: 53.9 bits (128), Expect = 1.2e-07
Identity = 21/65 (32.31%), Postives = 33/65 (50.77%), Query Frame = 0


Query: 53  LEKALEGETCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRRTCPICRY 112
           LE++    TC +C+        D   G    +LPC H++H VC++ W   CR  CP+C+ 
Sbjct: 224 LEESSTSVTCAICID-------DYCVGEKLRILPCKHKYHAVCIDSWLGRCRSFCPVCKQ 281

Query: 113 SMEGG 118
           +   G
Sbjct: 284 NPRTG 281

The following BLAST results are available for this feature:

BLAST of CSPI03G00570 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q91XF4	4.9e-09	31.68	E3 ubiquitin-protein ligase RNF167 OS=Mus musculus OX=10090 GN=Rnf167 PE=2 SV=1	[more]
Q9H6Y7	6.4e-09	32.29	E3 ubiquitin-protein ligase RNF167 OS=Homo sapiens OX=9606 GN=RNF167 PE=1 SV=1	[more]
Q5XIL0	1.1e-08	31.25	E3 ubiquitin-protein ligase RNF167 OS=Rattus norvegicus OX=10116 GN=Rnf167 PE=2 ...	[more]
Q9M2S6	6.0e-07	28.57	E3 ubiquitin-protein ligase SDIR1 OS=Arabidopsis thaliana OX=3702 GN=SDIR1 PE=1 ...	[more]
Q8BP31	7.8e-07	37.66	RING finger protein 122 OS=Mus musculus OX=10090 GN=Rnf122 PE=2 SV=1	[more]

BLAST of CSPI03G00570 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4W7	6.5e-81	100.00	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G002620 P...	[more]
A0A5D3CJ45	1.3e-73	91.95	E3 ubiquitin-protein ligase RNF13 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A6J1CW69	5.8e-45	65.54	E3 ubiquitin-protein ligase SDIR1-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A7N2R4T7	1.6e-26	46.98	RING-type domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1	[more]
A0A6A1UIA7	4.3e-24	49.64	Protein preY, mitochondrial OS=Morella rubra OX=262757 GN=CJ030_MR0G008870 PE=4 ...	[more]

BLAST of CSPI03G00570 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8649999.1	1.4e-77	100.00	hypothetical protein Csa_010276, partial [Cucumis sativus]	[more]
KAA0052944.1	2.7e-73	91.95	E3 ubiquitin-protein ligase RNF13 [Cucumis melo var. makuwa] >TYK11400.1 E3 ubiq...	[more]
XP_038906276.1	1.1e-66	84.93	E3 ubiquitin-protein ligase RNF167-like [Benincasa hispida]	[more]
KAG6577791.1	9.1e-61	77.93	Protein goliath, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7015830.1	2.0e-60	77.93	Protein goliath, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CSPI03G00570 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G51325.1	9.8e-13	42.86	RING/U-box superfamily protein	[more]
AT3G55530.1	4.3e-08	28.57	RING/U-box superfamily protein	[more]
AT4G32600.1	7.3e-08	37.97	RING/U-box superfamily protein	[more]
AT5G45290.1	7.3e-08	34.67	RING/U-box superfamily protein	[more]
AT1G35630.1	1.2e-07	32.31	Protease-associated (PA) RING/U-box zinc finger family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 62..110 e-value: 3.2E-6 score: 36.7
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 61..111 e-value: 1.5E-9 score: 38.0
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 62..111 score: 11.913911
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 49..127 e-value: 2.7E-14 score: 54.0
None	No IPR available	PANTHER	PTHR45977	TARGET OF ERK KINASE MPK-1	coord: 43..121
None	No IPR available	PANTHER	PTHR45977:SF13	GB\|AAF27103.1	coord: 43..121
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 54..114

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G00570.1	CSPI03G00570.1	mRNA