CSPI03G00270 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G00270
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages;
Location	Chr3: 229653 .. 233440 (-)
RNA-Seq Expression	CSPI03G00270
Synteny	CSPI03G00270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAACCTCTTCCAGAATAACCTCCGTCCAATTGCGACGATGAACGGAGTTTCTTTTGTTTGATTAATTCACTGTTGTGGCAGAAAATTCTCTGGAAATGGAACCGGAAGGAATTGTAGAGCATCGAAGCTCCATTGCCGCTCCATTCATTTTCTTTATCGTTATCGGTTTTCAGTTTCTCGCTAAATGGCTGGAGCACCTGAAGAAGGTTCGCCTTTTCGTTTGATTTTATTTTTTCCGTTGGAATTCTTTTCGTGTTTGTATTTTTTATCATTCCGCTTGTTTTTCAATCCTAAGCTTGTTATTTATAATTGAATTTTGAGGTTTGAGCTGTAGCGCGTTTCAGTATTTTTGTTGACAGACTTGAGAATGCAATTTATCTAACTGTGCTTCGTGAAGTTTACGATATTGGATTGAAGACATTGTGATTTGATTAGTTTAGGAACGTGATGCATTTAATGTGGAGATCTATGGACATTTTCAGTTTTAATGTCTGGGAATTTGCTAATGTTATAATTTGTTATCCGTTCAATCTTGTCAACTTGTTTGTTTTGAAACAATCGTGTTTCCATCATGCGTGTACTTTTCAGAGAGGTTCCAACAGCCAGGTGGAAATGGAGTTGCGCAAATCAATAAAGCAACTTCTGAAGGAGGCTAGCACCTTATCTCAGTGAGTAGTATTTTCCAGCTCGATTCAGCATTAGACAGTGTTAATTTGGCTCAAATCATCTTACAAAAAAAAAAAAAGGCTCAAATCATTCATTCTATATGATTGTTTGCAACTGTTATGGCTGTCATGGGGATCATATTTATTTGCGTTTATGTTCTTGTAGACCATCTACATTTGCACAGGCTGCAAAACTTCGGAGGTTGGCAGCCGCTAAGGAGAAGGAGCTGGCAAATTGTGAGGCTATAATTAATTCATCCCCCGATATTCAAATGTTCCCTTAATTTTTTTTTTAGCTAATGAGTTGCTGAGAGAATATTGTGAAATGCTTTATACCTCTTCTCATCAATAACGGGTAGGGGAATAAGTTTGCTATTGTATGGTAAGGTTTGCTTTATAAAACATCGTTGCATGAGCAGTTTTGAGGATGTTGCTTGGACCATTGACTGTTATGTGATATAGGAATCTAAGGATTAGAAGCTTGAGCAACCACTAAGCTATTGACAATTAGAAAGAATGGTTCTCTTATTGAAACCAAAGAAAAAAAAGGTTATACACTCCAAACTAACAGTAAGATGGGTGTATGTGCTGGTAAATGTTATTGCCGCTCCATCCAATGAAACTGGGTAATCGTAAATATATTTGCAACTTCATCCAACATGGTGCTCATGCTGCCAATTGATTCATATATGGACCATGGTTTAACCGTTGGAACTTGGAGATCATCGAACAAGCTCTTGTCTATAATATGACTCTGGATGGGAGGGAACTAAAGAAGTGTTATGTATATCATAGCAAGTTGAAAGCAACTACTCATTGGTAAAATCGGTCTTATTCTAGGAATCGTGGTAAATGTACTACATTAGGCGTTAGCACATGCAAATGGGAGAAGTTGATTTACTCTATTGTGAATGATTGTTGCATGCTTGAGGTGTCGGCATCCAACTAATATAGGATATTGACGTAGATGAACTTGTGTAGTGGCACCCTTTCTTATACAAGACCATGTTTTCCTTGACAATATGTGGAGTGGGGGGGGAAACCTCTGGCCTTGAGGTCAATAGAGTTTTATGCCAGTTTTTTTCAAATCTAATATCACCCCTAATTCTAACTAAAATGTTGTGTGGCATAGTTTGGCCCATGTTAAATGCCAATTTTGATGTAGGGCTTTACCAAGGTTATCCATGTTCAATTATTCGTTTCAAGTTATCCAACTACTGAGAGTGATTCTTATGTTTTCTAAAAGGCCAATATCACTCAATATGCATCTTGAAGTCTAGCTAAAATATAAGAGCAGTAAAATAGTCTTATTTATCATTATAGCCTAGCCTCAATTTCTGTTCATCTTATTTCAGTTGTTTTCTCCAATTGATTACTTTCCTTCCCTTGTGTACTACTTATTAAGATGCTTCGGATTACACTTTTAATTCAATTTGAATGACATTGCTGCCAGATCAAGAATCACGTAATAAGGAGATCAAGACGTCATATGGTTTATATAGTCAAGTACTGTTGGTATCGAAGGTATTATGTTCTTCTAAATGTTCTTCTAAATGTGTCTATATGTTTGCAGTTCTTTAAAAAGTTTGTTATCTTATGGTCATGTAGGTTATTATACATATTGTGCTGGTTTGCTGGTTTTGGAGAGCTTCTGTTGCTACTGTACCTCATCACCTTGTGCAGCCATTTGGTAATCACTCTCATCGCAAGCATAATTTCTGAAGAACTATTAAAAATATGTCATTTCATTTAAAATTTTAAATATCAGTGTCTTGATGAATCCCCCTACTGCAGGAAAGTTTTTATCTTGGAGGGCTGGAGGTACCGTAAATGATTATGTGAAGGTAGAATTCTCATTTATTTGCATATAACCTCATCGATCATATTGCATTTATTTTATCTCTTGACCATAAACATAACACCACTTTCACCCAAAGAAATGATATTAGTGAGGAATGAATGTTCTGCTTCGATTGAGGAGGTGCTCCTAGGTTTGCCAATTTGGAAGGAAGGAAAAGTTTTGTGGCCCACTAGTTTCTTTGCTATCTTCAATCTCGTGGGGGGTTTGGCTTGAGAGAGACAATAGGATTTCTTAGAGAGATGTGCGGGAGGAGGTGAGGTTTAACTAACACCTAGTTGAGGGCATCCACCACTGGACCTTTTTGTAATTTCTTCGATTGGTAGTGATTTTTGGCTTGGATGCCCTTGTTGTAGGTTTTTTTGGACTTTTATTTTTGTTGGCCATTGTTTTCTTGCTGAAATCTCGGTTTCTTACCAAAAGATTAAAAAATACAGCAGTAAAGAGTTGGGGTAGTTTTAAACAGTGATTTGTTATAAATAGAATGAGCGTAAAAAGTTAAATTTATCAATTATTTTGTTGGTTTTTGTTGGATTATGGCTTAAGTAATCTCAATAACTAACTAAGAGCTCATGGGTTCAATACATGGTTGTTCTGTGAGATTAGTCGAGATGTGCATAAACCGATTCGGACATTTACGGATTAAAAAAAATTAGTGCTTGAGTGGGGAAGATTCTCGGAACCTCAAATACTAGAGGGTGTTTTATTTTATATTAGGCAACTACATATAATAACATGAAATTACTATCTATCACCACAATCATGGCTCTGCACAAATGAGAGAGTATGGTGATTCGTAGGTAAATTTTAATGATGAACTGCAGGTTGGAATTATACCTTGGTTGATACTGTCCACAAGGGTTAGCAAGTTTGTATTTCGAGTGGTGAAGTAAAAATGGGGATTGAAGGTAATTGTGATGAAGAATGAACGATACATCGCCACATGTGCTATGTACAATATTTGGCAACCAATATTTTCCTAAATGTGAGGGGTGGCTGGAGAAGTTTTTACAGCCCCACCACTATTTCTTCTTGTAAGGTTCAGCATTGTTGTTCTTTTTCTTTCTTTTCCCACCATATATTTTCCCTTTCATTCTTCTTTTTTGGGAAACTCTTTATCTTAGGTATCATTTATTGTTATTATTTTTTACTTAGAATTAAGATATTCTATAGATATATATATATAGATTGGTTGCCTGTATGCTGCTTAGGGTAAGGGAAGGTTGGATCCTAAATCTTCACTAATCTTAGTGCTAAAAAAAAAT

mRNA sequence

CAACCTCTTCCAGAATAACCTCCGTCCAATTGCGACGATGAACGGAGTTTCTTTTGTTTGATTAATTCACTGTTGTGGCAGAAAATTCTCTGGAAATGGAACCGGAAGGAATTGTAGAGCATCGAAGCTCCATTGCCGCTCCATTCATTTTCTTTATCGTTATCGGTTTTCAGTTTCTCGCTAAATGGCTGGAGCACCTGAAGAAGAGAGGTTCCAACAGCCAGGTGGAAATGGAGTTGCGCAAATCAATAAAGCAACTTCTGAAGGAGGCTAGCACCTTATCTCAACCATCTACATTTGCACAGGCTGCAAAACTTCGGAGGTTGGCAGCCGCTAAGGAGAAGGAGCTGGCAAATTATCAAGAATCACGTAATAAGGAGATCAAGACGTCATATGGTTTATATAGTCAAGTACTGTTGGTATCGAAGGTTATTATACATATTGTGCTGGTTTGCTGGTTTTGGAGAGCTTCTGTTGCTACTGTACCTCATCACCTTGTGCAGCCATTTGGAAAGTTTTTATCTTGGAGGGCTGGAGGTACCGTAAATGATTATGTGAAGGTTGGAATTATACCTTGGTTGATACTGTCCACAAGGGTTAGCAAGTTTGTATTTCGAGTGGTGAAGTAAAAATGGGGATTGAAGGTAATTGTGATGAAGAATGAACGATACATCGCCACATGTGCTATGTACAATATTTGGCAACCAATATTTTCCTAAATGTGAGGGGTGGCTGGAGAAGTTTTTACAGCCCCACCACTATTTCTTCTTGTAAGGTTCAGCATTGTTGTTCTTTTTCTTTCTTTTCCCACCATATATTTTCCCTTTCATTCTTCTTTTTTGGGAAACTCTTTATCTTAGGTATCATTTATTGTTATTATTTTTTACTTAGAATTAAGATATTCTATAGATATATATATATAGATTGGTTGCCTGTATGCTGCTTAGGGTAAGGGAAGGTTGGATCCTAAATCTTCACTAATCTTAGTGCTAAAAAAAAAT

Coding sequence (CDS)

ATGGAACCGGAAGGAATTGTAGAGCATCGAAGCTCCATTGCCGCTCCATTCATTTTCTTTATCGTTATCGGTTTTCAGTTTCTCGCTAAATGGCTGGAGCACCTGAAGAAGAGAGGTTCCAACAGCCAGGTGGAAATGGAGTTGCGCAAATCAATAAAGCAACTTCTGAAGGAGGCTAGCACCTTATCTCAACCATCTACATTTGCACAGGCTGCAAAACTTCGGAGGTTGGCAGCCGCTAAGGAGAAGGAGCTGGCAAATTATCAAGAATCACGTAATAAGGAGATCAAGACGTCATATGGTTTATATAGTCAAGTACTGTTGGTATCGAAGGTTATTATACATATTGTGCTGGTTTGCTGGTTTTGGAGAGCTTCTGTTGCTACTGTACCTCATCACCTTGTGCAGCCATTTGGAAAGTTTTTATCTTGGAGGGCTGGAGGTACCGTAAATGATTATGTGAAGGTTGGAATTATACCTTGGTTGATACTGTCCACAAGGGTTAGCAAGTTTGTATTTCGAGTGGTGAAGTAA

Protein sequence

MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLVSKVIIHIVLVCWFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK*

Homology

[Close]

BLAST of CSPI03G00270 vs. ExPASy Swiss-Prot
Match: Q1H5D2 (Protein GET1 OS=Arabidopsis thaliana OX=3702 GN=GET1 PE=1 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 3.7e-51
Identity = 105/177 (59.32%), Postives = 129/177 (72.88%), Query Frame = 0


Query: 1   MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEAS 60
           ME E ++E R  +AAP  F +V+ FQ L+KWL+ LKK+GS +  E ELR  IKQLL+EAS
Sbjct: 1   MEGEKLIEDRGFLAAPLTFVVVVVFQLLSKWLDQLKKKGSKNTRESELRTEIKQLLREAS 60

Query: 61  TLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLVSKVIIHIVLVC 120
            LSQP+TFAQAAKLRR AA KEKELA Y E  +KEIK SY +Y + LL SKV+I+++LV 
Sbjct: 61  ALSQPATFAQAAKLRRSAATKEKELAQYLEQHHKEIKLSYDMYGKGLLASKVVIYLILVL 120

Query: 121 WFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK 178
            FWR  +A +   LVQPFG  LSW  GG +  +V VGIIPWLILS RVSK+V R V+
Sbjct: 121 CFWRTPIAIIAKQLVQPFGTLLSWGTGGHMTGHVMVGIIPWLILSNRVSKYVCRFVE 177

[Close]

BLAST of CSPI03G00270 vs. ExPASy TrEMBL
Match: A0A0A0L4T9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G002280 PE=3 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 1.7e-91
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEAS 60
           MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEAS
Sbjct: 1   MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEAS 60

Query: 61  TLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLVSKVIIHIVLVC 120
           TLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLVSKVIIHIVLVC
Sbjct: 61  TLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLVSKVIIHIVLVC 120

Query: 121 WFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK 178
           WFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK
Sbjct: 121 WFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK 177

[Close]

BLAST of CSPI03G00270 vs. ExPASy TrEMBL
Match: A0A1S3BKE1 (uncharacterized protein LOC103490650 OS=Cucumis melo OX=3656 GN=LOC103490650 PE=3 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 2.4e-85
Identity = 166/177 (93.79%), Postives = 173/177 (97.74%), Query Frame = 0


Query: 1   MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEAS 60
           ME EGIVEH SSIAAPFIFFIVIGFQFLA+WLEHLKK GSNSQVE+ELRKSIKQLL+EAS
Sbjct: 3   MEAEGIVEHGSSIAAPFIFFIVIGFQFLARWLEHLKKGGSNSQVELELRKSIKQLLREAS 62

Query: 61  TLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLVSKVIIHIVLVC 120
           TLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLL+SKVII+IVLVC
Sbjct: 63  TLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLISKVIIYIVLVC 122

Query: 121 WFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK 178
           WFWRASVATVPHHLVQPFGKFLSW+AGGTVNDYVKVGIIPWLILSTRVSKFV +VVK
Sbjct: 123 WFWRASVATVPHHLVQPFGKFLSWKAGGTVNDYVKVGIIPWLILSTRVSKFVCQVVK 179

[Close]

BLAST of CSPI03G00270 vs. ExPASy TrEMBL
Match: A0A6J1G1T6 (uncharacterized protein LOC111449636 OS=Cucurbita moschata OX=3662 GN=LOC111449636 PE=3 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 1.3e-78
Identity = 154/175 (88.00%), Postives = 166/175 (94.86%), Query Frame = 0


Query: 1   MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEAS 60
           ME E IVEHR+SI AP IF IVI FQFLA WL+HLKKRGSN+QVEMELRKSIKQLL+EAS
Sbjct: 1   MEAEEIVEHRNSIVAPSIFLIVIAFQFLAGWLDHLKKRGSNNQVEMELRKSIKQLLREAS 60

Query: 61  TLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLVSKVIIHIVLVC 120
           TLSQPSTFAQAAKLRR AAAKEKELANYQESR+K+IK+SYGLYS+VLL+SKV+I+IVLVC
Sbjct: 61  TLSQPSTFAQAAKLRRSAAAKEKELANYQESRSKKIKSSYGLYSRVLLISKVLIYIVLVC 120

Query: 121 WFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRV 176
           WFWRASVATVPHHLVQPFG+FLSWRAGGTVNDYVKVGIIPWLILSTRVSKFV RV
Sbjct: 121 WFWRASVATVPHHLVQPFGRFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVCRV 175

[Close]

BLAST of CSPI03G00270 vs. ExPASy TrEMBL
Match: A0A6J1I7A9 (uncharacterized protein LOC111470261 OS=Cucurbita maxima OX=3661 GN=LOC111470261 PE=3 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 1.7e-78
Identity = 153/175 (87.43%), Postives = 166/175 (94.86%), Query Frame = 0


Query: 1   MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEAS 60
           ME E IVEHR+SI AP IF IVI FQFLA WL+HLKKRGSN+QVEMELRKSIKQLL+EAS
Sbjct: 1   MEAEEIVEHRNSIVAPSIFLIVIAFQFLAGWLDHLKKRGSNNQVEMELRKSIKQLLREAS 60

Query: 61  TLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLVSKVIIHIVLVC 120
           TLSQPSTFAQAAKLRRLAAAKEKELANYQESR+K++K+SYGLYS+VLL+SKV+I+IVLVC
Sbjct: 61  TLSQPSTFAQAAKLRRLAAAKEKELANYQESRSKKVKSSYGLYSRVLLISKVLIYIVLVC 120

Query: 121 WFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRV 176
           WFWRASVATVPHHLVQPFG+FLSWRAGG VNDYVKVGIIPWLILSTRVSKFV RV
Sbjct: 121 WFWRASVATVPHHLVQPFGRFLSWRAGGIVNDYVKVGIIPWLILSTRVSKFVCRV 175

[Close]

BLAST of CSPI03G00270 vs. ExPASy TrEMBL
Match: A0A6J1L884 (uncharacterized protein LOC111500212 OS=Cucurbita maxima OX=3661 GN=LOC111500212 PE=3 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 6.3e-78
Identity = 154/176 (87.50%), Postives = 164/176 (93.18%), Query Frame = 0


Query: 2   EPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEAST 61
           E EGIVEHRSSIAAP IF IVI FQFLA+WLEHLKK GSNSQVEMELRKSIKQLL+EAST
Sbjct: 6   EAEGIVEHRSSIAAPCIFLIVIAFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREAST 65

Query: 62  LSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLVSKVIIHIVLVCW 121
           LSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYS+VLL+SKV ++I LV W
Sbjct: 66  LSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSRVLLISKVFMYITLVFW 125

Query: 122 FWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK 178
           FWR SVATVPHHLVQPFG+ LSW+AGG VNDYVKVGIIPWLILSTRVSKFV +VV+
Sbjct: 126 FWRVSVATVPHHLVQPFGRVLSWKAGGIVNDYVKVGIIPWLILSTRVSKFVCQVVR 181

[Close]

BLAST of CSPI03G00270 vs. NCBI nr
Match: XP_004146176.1 (uncharacterized protein LOC101204142 [Cucumis sativus] >KGN55607.1 hypothetical protein Csa_010199 [Cucumis sativus])

HSP 1 Score: 345.1 bits (884), Expect = 3.5e-91
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEAS 60
           MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEAS
Sbjct: 1   MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEAS 60

Query: 61  TLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLVSKVIIHIVLVC 120
           TLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLVSKVIIHIVLVC
Sbjct: 61  TLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLVSKVIIHIVLVC 120

Query: 121 WFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK 178
           WFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK
Sbjct: 121 WFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK 177

[Close]

BLAST of CSPI03G00270 vs. NCBI nr
Match: XP_008448478.1 (PREDICTED: uncharacterized protein LOC103490650 [Cucumis melo])

HSP 1 Score: 324.7 bits (831), Expect = 5.0e-85
Identity = 166/177 (93.79%), Postives = 173/177 (97.74%), Query Frame = 0


Query: 1   MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEAS 60
           ME EGIVEH SSIAAPFIFFIVIGFQFLA+WLEHLKK GSNSQVE+ELRKSIKQLL+EAS
Sbjct: 3   MEAEGIVEHGSSIAAPFIFFIVIGFQFLARWLEHLKKGGSNSQVELELRKSIKQLLREAS 62

Query: 61  TLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLVSKVIIHIVLVC 120
           TLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLL+SKVII+IVLVC
Sbjct: 63  TLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLISKVIIYIVLVC 122

Query: 121 WFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK 178
           WFWRASVATVPHHLVQPFGKFLSW+AGGTVNDYVKVGIIPWLILSTRVSKFV +VVK
Sbjct: 123 WFWRASVATVPHHLVQPFGKFLSWKAGGTVNDYVKVGIIPWLILSTRVSKFVCQVVK 179

[Close]

BLAST of CSPI03G00270 vs. NCBI nr
Match: KAG6596276.1 (hypothetical protein SDJN03_09456, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027827.1 hypothetical protein SDJN02_09004 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 304.7 bits (779), Expect = 5.3e-79
Identity = 155/175 (88.57%), Postives = 167/175 (95.43%), Query Frame = 0


Query: 1   MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEAS 60
           ME E IVEHR+SI AP IFFIVI FQFLA WL+HLKKRGSN+QVEMELRKSIKQLL+EAS
Sbjct: 1   MEAEEIVEHRNSIVAPSIFFIVIAFQFLAGWLDHLKKRGSNNQVEMELRKSIKQLLREAS 60

Query: 61  TLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLVSKVIIHIVLVC 120
           TLSQPSTFAQAAKLRR AAAKEKELANYQESR+K+IK+SYGLYS+VLL+SKV+I+IVLVC
Sbjct: 61  TLSQPSTFAQAAKLRRSAAAKEKELANYQESRSKKIKSSYGLYSRVLLISKVLIYIVLVC 120

Query: 121 WFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRV 176
           WFWRASVATVPHHLVQPFG+FLSWRAGGTVNDYVKVGIIPWLILSTRVSKFV RV
Sbjct: 121 WFWRASVATVPHHLVQPFGRFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVCRV 175

[Close]

BLAST of CSPI03G00270 vs. NCBI nr
Match: XP_023539852.1 (uncharacterized protein LOC111800404 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 303.9 bits (777), Expect = 9.0e-79
Identity = 155/175 (88.57%), Postives = 166/175 (94.86%), Query Frame = 0


Query: 1   MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEAS 60
           ME E IVEHR+SI AP IF IVI FQFLA WL+HLKKRGSN+QVEMELRKSIKQLL+EAS
Sbjct: 1   MEAEEIVEHRNSIVAPSIFLIVIAFQFLAGWLDHLKKRGSNNQVEMELRKSIKQLLREAS 60

Query: 61  TLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLVSKVIIHIVLVC 120
           TLSQPSTFAQAAKLRR AAAKEKELANYQESR+KEIK+SYGLYS+VLL+SKV+I+IVLVC
Sbjct: 61  TLSQPSTFAQAAKLRRSAAAKEKELANYQESRSKEIKSSYGLYSRVLLISKVLIYIVLVC 120

Query: 121 WFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRV 176
           WFWRASVATVPHHLVQPFG+FLSWRAGGTVNDYVKVGIIPWLILSTRVSKFV RV
Sbjct: 121 WFWRASVATVPHHLVQPFGRFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVCRV 175

[Close]

BLAST of CSPI03G00270 vs. NCBI nr
Match: XP_038904813.1 (uncharacterized protein LOC120091071 [Benincasa hispida])

HSP 1 Score: 303.5 bits (776), Expect = 1.2e-78
Identity = 154/177 (87.01%), Postives = 166/177 (93.79%), Query Frame = 0


Query: 1   MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEAS 60
           ME E I+E++SSIAAPFIF IVIGFQFLAKWLEHLKK GSNSQ+EMELRKSIKQLL+EAS
Sbjct: 1   MEAERIIENQSSIAAPFIFLIVIGFQFLAKWLEHLKKGGSNSQMEMELRKSIKQLLREAS 60

Query: 61  TLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLVSKVIIHIVLVC 120
           TLSQPSTFAQAAKLRRLAAAKEKELANYQESRNK++KTSYGLY +VLL+SKV I+I+LVC
Sbjct: 61  TLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKQMKTSYGLYGRVLLISKVFIYIILVC 120

Query: 121 WFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK 178
           WFWR SVATVP HLVQPFGKFLSWR GGTVND VKVGI+PWLILSTRVSKFV RVVK
Sbjct: 121 WFWRVSVATVPRHLVQPFGKFLSWRTGGTVNDCVKVGILPWLILSTRVSKFVCRVVK 177

[Close]

BLAST of CSPI03G00270 vs. TAIR 10
Match: AT4G16444.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CHD5-like protein (InterPro:IPR007514); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 202.6 bits (514), Expect = 2.6e-52
Identity = 105/177 (59.32%), Postives = 129/177 (72.88%), Query Frame = 0


Query: 1   MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEAS 60
           ME E ++E R  +AAP  F +V+ FQ L+KWL+ LKK+GS +  E ELR  IKQLL+EAS
Sbjct: 1   MEGEKLIEDRGFLAAPLTFVVVVVFQLLSKWLDQLKKKGSKNTRESELRTEIKQLLREAS 60

Query: 61  TLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLVSKVIIHIVLVC 120
            LSQP+TFAQAAKLRR AA KEKELA Y E  +KEIK SY +Y + LL SKV+I+++LV 
Sbjct: 61  ALSQPATFAQAAKLRRSAATKEKELAQYLEQHHKEIKLSYDMYGKGLLASKVVIYLILVL 120

Query: 121 WFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK 178
            FWR  +A +   LVQPFG  LSW  GG +  +V VGIIPWLILS RVSK+V R V+
Sbjct: 121 CFWRTPIAIIAKQLVQPFGTLLSWGTGGHMTGHVMVGIIPWLILSNRVSKYVCRFVE 177

The following BLAST results are available for this feature:

BLAST of CSPI03G00270 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1H5D2	3.7e-51	59.32	Protein GET1 OS=Arabidopsis thaliana OX=3702 GN=GET1 PE=1 SV=1	[more]

BLAST of CSPI03G00270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4T9	1.7e-91	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G002280 PE=3 SV=1	[more]
A0A1S3BKE1	2.4e-85	93.79	uncharacterized protein LOC103490650 OS=Cucumis melo OX=3656 GN=LOC103490650 PE=...	[more]
A0A6J1G1T6	1.3e-78	88.00	uncharacterized protein LOC111449636 OS=Cucurbita moschata OX=3662 GN=LOC1114496...	[more]
A0A6J1I7A9	1.7e-78	87.43	uncharacterized protein LOC111470261 OS=Cucurbita maxima OX=3661 GN=LOC111470261...	[more]
A0A6J1L884	6.3e-78	87.50	uncharacterized protein LOC111500212 OS=Cucurbita maxima OX=3661 GN=LOC111500212...	[more]

BLAST of CSPI03G00270 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146176.1	3.5e-91	100.00	uncharacterized protein LOC101204142 [Cucumis sativus] >KGN55607.1 hypothetical ...	[more]
XP_008448478.1	5.0e-85	93.79	PREDICTED: uncharacterized protein LOC103490650 [Cucumis melo]	[more]
KAG6596276.1	5.3e-79	88.57	hypothetical protein SDJN03_09456, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023539852.1	9.0e-79	88.57	uncharacterized protein LOC111800404 [Cucurbita pepo subsp. pepo]	[more]
XP_038904813.1	1.2e-78	87.01	uncharacterized protein LOC120091071 [Benincasa hispida]	[more]

BLAST of CSPI03G00270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16444.1	2.6e-52	59.32	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 71..94
None	No IPR available	PANTHER	PTHR11760:SF44	BNAC07G33680D PROTEIN	coord: 11..172
None	No IPR available	PANTHER	PTHR11760	30S/40S RIBOSOMAL PROTEIN S3	coord: 11..172
IPR028945	Get1 family	PFAM	PF04420	CHD5	coord: 29..147 e-value: 6.4E-10 score: 39.1

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G00270.1	CSPI03G00270.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048767	root hair elongation
biological_process	GO:0071816	tail-anchored membrane protein insertion into ER membrane
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0043529	GET complex
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0043621	protein self-association