CSPI02G27690 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI02G27690
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr2: 23706582 .. 23707896 (-)
RNA-Seq ExpressionCSPI02G27690
SyntenyCSPI02G27690
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGGTATACACAACCTAAGGACTCACTCTCACTTTTCACGCGTGACCCAAGAAAAAACTCTTCCTCTTCTTTTCTCTCTTGGGTTTGTCTCCCCACCTTCCACTTCCACCTCCACCTTCAAGCTATTCCACCAAAAAATACGACTTTTGCCACAACCAGGTAATTGTAAACGTCCCATCTCTCCACCTCTCATCGCCCCATCTTTTTGGTTCCGTCACAAACAAGCAAACCTTCTCTCTGTTGCATCCACTTGTATATCTTCACGGCTCTGTCGCTTTCTCAGTCGCGTTAAAGAAAAGCAACACAACCGCTCCGTCCGAATCGTCGACGTTCTGATCTCAGATGTCGTTCATTCAATCCTCGTGATGGAAGTCGTCGTCCACCATCGCTCCTTCGAAAATGTTCGGCTAGCTGGTGCTACCCCAAACGTTCCTAGCCTCTTCAAGTTCTGTTATGTCACGTTTCGCTCCGTCAAAAGTCACTCCCTCACGTTCTCAGCCGCTGATCTAGTCTACTTACTATTTCCAGATTCGTTGCGTTCATAGCCACGCCAATGACAAACAACACAGCCACTCGCCTACCTTTATCTTAATGCCAGACGTTGTTCGTTCTACTATGCTTCATGATTGAAGGTAACGAACTCAAACCAACTTTTTTTTCTTTTTGAAAGCAACGTTTCCTTTTTAAGAACAAGATTTTATATTCTTAAGAAATACCGATTTAGGAAATAATTTTAAATGAAAAATTATTTGAAATAGTTGGGAAAACAGAAATTATATCTAATAAGGAGATTTCCCTACTTTTTTTTAGAATTCACCAACAGATATATGAGATGTTTAGCAAATATTTTTTATCTAATAAATTTAAAAAACTGATTAAAGATATGAAAAAAGAGATAATAGAAGGAAGAACAAGGGCTAGCTGAAGATTGAGGGCTACTAAAATAAATGGTGGAAAAAAAACAACAAACAAAGTTCCAATAATTCTCCCAAAGTGAAGACGAGGTATGTTTCTATTTTCTACCTACAATGATTCTCAAAACCAAAAAACTAAAAATCTTTGCACAACATGAAACAAAAAACACAATGGTTGGATATTGGTAGTAAAACGTGGAACCGATATAAATACAGATATAGATATGAAGTTTGAAAAGAAGTAGATGTTCCATAAAAAAACAAGAATAATAGCATGGTAATACAACTTTATCTTAAATCTCGGTGACTGAGCATATTGGAAAAAGGGCACTGCAAAGAAGGAAGAAGGCATTAAGGAATGTAGAGGAAGAACAAGAGGAGAAAGAGGACAAGCTAGAGGA

mRNA sequence

AAGGTATACACAACCTAAGGACTCACTCTCACTTTTCACGCGTGACCCAAGAAAAAACTCTTCCTCTTCTTTTCTCTCTTGGGTTTGTCTCCCCACCTTCCACTTCCACCTCCACCTTCAAGCTATTCCACCAAAAAATACGACTTTTGCCACAACCAGGTAATTGTAAACGTCCCATCTCTCCACCTCTCATCGCCCCATCTTTTTGGTTCCGTCACAAACAAGCAAACCTTCTCTCTGTTGCATCCACTTGTATATCTTCACGGCTCTGTCGCTTTCTCAGTCGCGTTAAAGAAAAGCAACACAACCGCTCCGTCCGAATCGTCGACGTTCTGATCTCAGATGTCGTTCATTCAATCCTCGTGATGGAAGTCGTCGTCCACCATCGCTCCTTCGAAAATGTTCGGCTAGCTGGTGCTACCCCAAACGTTCCTAGCCTCTTCAAGTTCTGTTATGTCACGTTTCGCTCCGTCAAAAGTCACTCCCTCACGTTCTCAGCCGCTGATCTAGTCTACTTACTATTTCCAGATTCGTTGCGTTCATAGCCACGCCAATGACAAACAACACAGCCACTCGCCTACCTTTATCTTAATGCCAGACGTTGTTCGTTCTACTATGCTTCATGATTGAAGAGATAATAGAAGGAAGAACAAGGGCTAGCTGAAGATTGAGGGCTACTAAAATAAATGGTGGAAAAAAAACAACAAACAAAGTTCCAATAATTCTCCCAAAGTGAAGACGAGGTATGTTTCTATTTTCTACCTACAATGATTCTCAAAACCAAAAAACTAAAAATCTTTGCACAACATGAAACAAAAAACACAATGGTTGGATATTGGTAGTAAAACGTGGAACCGATATAAATACAGATATAGATATGAAGTTTGAAAAGAAGTAGATGTTCCATAAAAAAACAAGAATAATAGCATGGTAATACAACTTTATCTTAAATCTCGGTGACTGAGCATATTGGAAAAAGGGCACTGCAAAGAAGGAAGAAGGCATTAAGGAATGTAGAGGAAGAACAAGAGGAGAAAGAGGACAAGCTAGAGGA

Coding sequence (CDS)

ATGGAAGTCGTCGTCCACCATCGCTCCTTCGAAAATGTTCGGCTAGCTGGTGCTACCCCAAACGTTCCTAGCCTCTTCAAGTTCTGTTATGTCACGTTTCGCTCCGTCAAAAGTCACTCCCTCACGTTCTCAGCCGCTGATCTAGTCTACTTACTATTTCCAGATTCGTTGCGTTCATAG

Protein sequence

MEVVVHHRSFENVRLAGATPNVPSLFKFCYVTFRSVKSHSLTFSAADLVYLLFPDSLRS*
Homology
[Close]
BLAST of CSPI02G27690 vs. NCBI nr
Match: KAE8652357.1 (hypothetical protein Csa_021789 [Cucumis sativus])

HSP 1 Score: 56.2 bits (134), Expect = 1.1e-04
Identity = 28/35 (80.00%), Postives = 30/35 (85.71%), Query Frame = 0 

Query: 1  MEVVVHHRSFENVRLAGATPNVPSL-FKFCYVTFR 35
          MEVVVHHRSFENVRLAGATPNVPSL    C+V+ R
Sbjct: 1  MEVVVHHRSFENVRLAGATPNVPSLQVLLCHVSLR 35

The following BLAST results are available for this feature:
BLAST of CSPI02G27690 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI02G27690 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI02G27690 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8652357.11.1e-0480.00hypothetical protein Csa_021789 [Cucumis sativus][more]
BLAST of CSPI02G27690 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI02G27690.1CSPI02G27690.1mRNA