CSPI02G23310 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI02G23310
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr2: 20171137 .. 20171449 (-)
RNA-Seq ExpressionCSPI02G23310
SyntenyCSPI02G23310
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTCGTCCGACCAACTTTCTCTTCAGTTCTTCGGCCGTTCTTCAGCATTCAACGTCCGTCGTTCGGGTCGCGCAAGCCAAGCGTCAAGCCTCACGTCCCGTTCGCACATAAATCTGTCCCATGCAGGACTCCACTTTCGGTTCCATCAAGGTCACAGCCTCCGTCGCGCAGTCTAGATTGGAATCGTTGGTTCATTGCTGCTCTGATCTGCTTCCGTTTGCGAAGCTTCGCTGCCGTCGCACTTGTAGCTGACGTCAGTCAGTCACGCCATCACACTATGCTATCACGTTTCCTCATCCGACTGACCTAG

mRNA sequence

ATGCTTCGTCCGACCAACTTTCTCTTCAGTTCTTCGGCCGTTCTTCAGCATTCAACGACTCCACTTTCGGTTCCATCAAGGTCACAGCCTCCGTCGCGCAGTCTAGATTGGAATCGTTGGTTCATTGCTGCTCTGATCTGCTTCCGTTTGCGAAGCTTCGCTGCCGTCGCACTTGTAGCTGACGTCAGTCAGTCACGCCATCACACTATGCTATCACGTTTCCTCATCCGACTGACCTAG

Coding sequence (CDS)

ATGCTTCGTCCGACCAACTTTCTCTTCAGTTCTTCGGCCGTTCTTCAGCATTCAACGACTCCACTTTCGGTTCCATCAAGGTCACAGCCTCCGTCGCGCAGTCTAGATTGGAATCGTTGGTTCATTGCTGCTCTGATCTGCTTCCGTTTGCGAAGCTTCGCTGCCGTCGCACTTGTAGCTGACGTCAGTCAGTCACGCCATCACACTATGCTATCACGTTTCCTCATCCGACTGACCTAG

Protein sequence

MLRPTNFLFSSSAVLQHSTTPLSVPSRSQPPSRSLDWNRWFIAALICFRLRSFAAVALVADVSQSRHHTMLSRFLIRLT*
Homology
[Close]
BLAST of CSPI02G23310 vs. ExPASy TrEMBL
Match: A0A0A0LPI9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G380090 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 9.9e-23
Identity = 57/60 (95.00%), Postives = 57/60 (95.00%), Query Frame = 0 

Query: 20 TPLSVPSRSQPPSRSLDWNRWFIAALICFRLRSFAAVALVADVSQSRHHTMLSRFLIRLT 79
          TPLSVPSRSQPPSRSLDWNRWFIAALIC RLRSFAA A VADVSQSRHHTMLSRFLIRLT
Sbjct: 37 TPLSVPSRSQPPSRSLDWNRWFIAALICLRLRSFAAAAPVADVSQSRHHTMLSRFLIRLT 96

[Close]
BLAST of CSPI02G23310 vs. NCBI nr
Match: KAE8652196.1 (hypothetical protein Csa_022401 [Cucumis sativus])

HSP 1 Score: 115.5 bits (288), Expect = 2.1e-22
Identity = 57/60 (95.00%), Postives = 57/60 (95.00%), Query Frame = 0 

Query: 20  TPLSVPSRSQPPSRSLDWNRWFIAALICFRLRSFAAVALVADVSQSRHHTMLSRFLIRLT 79
           TPLSVPSRSQPPSRSLDWNRWFIAALIC RLRSFAA A VADVSQSRHHTMLSRFLIRLT
Sbjct: 430 TPLSVPSRSQPPSRSLDWNRWFIAALICLRLRSFAAAAPVADVSQSRHHTMLSRFLIRLT 489

The following BLAST results are available for this feature:
BLAST of CSPI02G23310 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI02G23310 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LPI99.9e-2395.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G380090 PE=4 SV=1[more]
BLAST of CSPI02G23310 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8652196.12.1e-2295.00hypothetical protein Csa_022401 [Cucumis sativus][more]
BLAST of CSPI02G23310 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI02G23310.1CSPI02G23310.1mRNA