CSPI02G22030 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTAAAACTTACTCAGGAAATAATTGGAAGGACAAGAATTCACCCATTATTATTCCCTCTTCTCTTTGGGGAAAGTCATGGAGTCTAGGAAGTTGACAGTTGATGCGGATTTTGGTACAAGTGTTTTATGTGATGACTGGAATAGAAAGGAAGAAAAGTCCATTATCTCTCATTTCCAATTTACTGTAGCATATTCAGAAGGTTCAACCAGTTCGATTGGATCAATATCGTCATCGAGCGTTTGTGACGAAGATGCATTATCGTCATTCTCTTCTTCTTCTTCTTGTTCGTCTTTGTCCTCGACTTCATCTTTGTTGTCCCAAAGTGAACTTCGTGAGCAACAACTTCCTATCAAGTAAGTTAAAGTGTCAAGTCCCCCCAAATTTTCTTTACACTATGCTTAAATGGCATCTAATTCATATGTTTGTTATGCAGAAAAGGGTTGTCAAAATTTTATGAAGGGAAATCACGAACCTTTTCATCTTTATCAGATGTGAAATCCATAGAAGACTTAGCAAAGAGAGAAAATGATTACAAAAAGAAAGACACTCGAATTAGTCCCAAGGCTACTATTTCAAAGAAGCATGGAAGGAGCTCTTTTGCAACCATGCTGTCTAAGGCAGACACTTTACTTTGAGTTGAGAGATTTCATATTCTCAACTAAATATATGCGCCATATGCCTCCTTTGAATAAATTGAAGGTGTTGCTACTTTTACAAAAATGAAAATAATTTAGAAAAAAAAACAACAACATTAAAGGTAGATAGTTGTGAACTTTAGTAGAAGA CTAAAACTTACTCAGGAAATAATTGGAAGGACAAGAATTCACCCATTATTATTCCCTCTTCTCTTTGGGGAAAGTCATGGAGTCTAGGAAGTTGACAGTTGATGCGGATTTTGGTACAAGTGTTTTATGTGATGACTGGAATAGAAAGGAAGAAAAGTCCATTATCTCTCATTTCCAATTTACTGTAGCATATTCAGAAGGTTCAACCAGTTCGATTGGATCAATATCGTCATCGAGCGTTTGTGACGAAGATGCATTATCGTCATTCTCTTCTTCTTCTTCTTGTTCGTCTTTGTCCTCGACTTCATCTTTGTTGTCCCAAAGTGAACTTCGTGAGCAACAACTTCCTATCAAAAAAGGGTTGTCAAAATTTTATGAAGGGAAATCACGAACCTTTTCATCTTTATCAGATGTGAAATCCATAGAAGACTTAGCAAAGAGAGAAAATGATTACAAAAAGAAAGACACTCGAATTAGTCCCAAGGCTACTATTTCAAAGAAGCATGGAAGGAGCTCTTTTGCAACCATGCTGTCTAAGGCAGACACTTTACTTTGAGTTGAGAGATTTCATATTCTCAACTAAATATATGCGCCATATGCCTCCTTTGAATAAATTGAAGGTGTTGCTACTTTTACAAAAATGAAAATAATTTAGAAAAAAAAACAACAACATTAAAGGTAGATAGTTGTGAACTTTAGTAGAAGA ATGGAGTCTAGGAAGTTGACAGTTGATGCGGATTTTGGTACAAGTGTTTTATGTGATGACTGGAATAGAAAGGAAGAAAAGTCCATTATCTCTCATTTCCAATTTACTGTAGCATATTCAGAAGGTTCAACCAGTTCGATTGGATCAATATCGTCATCGAGCGTTTGTGACGAAGATGCATTATCGTCATTCTCTTCTTCTTCTTCTTGTTCGTCTTTGTCCTCGACTTCATCTTTGTTGTCCCAAAGTGAACTTCGTGAGCAACAACTTCCTATCAAAAAAGGGTTGTCAAAATTTTATGAAGGGAAATCACGAACCTTTTCATCTTTATCAGATGTGAAATCCATAGAAGACTTAGCAAAGAGAGAAAATGATTACAAAAAGAAAGACACTCGAATTAGTCCCAAGGCTACTATTTCAAAGAAGCATGGAAGGAGCTCTTTTGCAACCATGCTGTCTAAGGCAGACACTTTACTTTGA MESRKLTVDADFGTSVLCDDWNRKEEKSIISHFQFTVAYSEGSTSSIGSISSSSVCDEDALSSFSSSSSCSSLSSTSSLLSQSELREQQLPIKKGLSKFYEGKSRTFSSLSDVKSIEDLAKRENDYKKKDTRISPKATISKKHGRSSFATMLSKADTLL* Homology
BLAST of CSPI02G22030 vs. ExPASy TrEMBL
Match: A0A1S3BBN3 (uncharacterized protein LOC103488165 OS=Cucumis melo OX=3656 GN=LOC103488165 PE=4 SV=1) HSP 1 Score: 258.8 bits (660), Expect = 1.5e-65 Identity = 145/161 (90.06%), Postives = 152/161 (94.41%), Query Frame = 0
BLAST of CSPI02G22030 vs. ExPASy TrEMBL
Match: A0A5A7VFF0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G003850 PE=4 SV=1) HSP 1 Score: 253.4 bits (646), Expect = 6.1e-64 Identity = 142/161 (88.20%), Postives = 151/161 (93.79%), Query Frame = 0
BLAST of CSPI02G22030 vs. ExPASy TrEMBL
Match: A0A6J1HB27 (uncharacterized protein LOC111462384 OS=Cucurbita moschata OX=3662 GN=LOC111462384 PE=4 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 1.8e-39 Identity = 111/163 (68.10%), Postives = 127/163 (77.91%), Query Frame = 0
BLAST of CSPI02G22030 vs. ExPASy TrEMBL
Match: A0A6J1KC75 (uncharacterized protein LOC111491976 OS=Cucurbita maxima OX=3661 GN=LOC111491976 PE=4 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 2.6e-38 Identity = 113/164 (68.90%), Postives = 129/164 (78.66%), Query Frame = 0
BLAST of CSPI02G22030 vs. ExPASy TrEMBL
Match: A0A0A0LLW5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G372880 PE=4 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 3.7e-37 Identity = 92/93 (98.92%), Postives = 92/93 (98.92%), Query Frame = 0
BLAST of CSPI02G22030 vs. NCBI nr
Match: XP_031737345.1 (uncharacterized protein LOC105434656 [Cucumis sativus] >XP_031737346.1 uncharacterized protein LOC105434656 [Cucumis sativus] >KAE8652155.1 hypothetical protein Csa_022355 [Cucumis sativus]) HSP 1 Score: 284.3 bits (726), Expect = 6.7e-73 Identity = 157/159 (98.74%), Postives = 158/159 (99.37%), Query Frame = 0
BLAST of CSPI02G22030 vs. NCBI nr
Match: XP_008444987.1 (PREDICTED: uncharacterized protein LOC103488165 [Cucumis melo] >XP_008444989.1 PREDICTED: uncharacterized protein LOC103488165 [Cucumis melo] >XP_008444990.1 PREDICTED: uncharacterized protein LOC103488165 [Cucumis melo]) HSP 1 Score: 258.8 bits (660), Expect = 3.0e-65 Identity = 145/161 (90.06%), Postives = 152/161 (94.41%), Query Frame = 0
BLAST of CSPI02G22030 vs. NCBI nr
Match: KAA0065056.1 (uncharacterized protein E6C27_scaffold82G003850 [Cucumis melo var. makuwa]) HSP 1 Score: 253.4 bits (646), Expect = 1.3e-63 Identity = 142/161 (88.20%), Postives = 151/161 (93.79%), Query Frame = 0
BLAST of CSPI02G22030 vs. NCBI nr
Match: XP_022961691.1 (uncharacterized protein LOC111462384 [Cucurbita moschata]) HSP 1 Score: 172.2 bits (435), Expect = 3.7e-39 Identity = 111/163 (68.10%), Postives = 127/163 (77.91%), Query Frame = 0
BLAST of CSPI02G22030 vs. NCBI nr
Match: XP_022996858.1 (uncharacterized protein LOC111491976 [Cucurbita maxima]) HSP 1 Score: 168.3 bits (425), Expect = 5.3e-38 Identity = 113/164 (68.90%), Postives = 129/164 (78.66%), Query Frame = 0
BLAST of CSPI02G22030 vs. TAIR 10
Match: AT5G56550.1 (oxidative stress 3 ) HSP 1 Score: 62.8 bits (151), Expect = 2.9e-10 Identity = 61/154 (39.61%), Postives = 81/154 (52.60%), Query Frame = 0
BLAST of CSPI02G22030 vs. TAIR 10
Match: AT4G26288.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: oxidative stress 3 (TAIR:AT5G56550.1); Has 289 Blast hits to 232 proteins in 41 species: Archae - 0; Bacteria - 12; Metazoa - 36; Fungi - 21; Plants - 151; Viruses - 2; Other Eukaryotes - 67 (source: NCBI BLink). ) HSP 1 Score: 60.8 bits (146), Expect = 1.1e-09 Identity = 57/131 (43.51%), Postives = 76/131 (58.02%), Query Frame = 0
BLAST of CSPI02G22030 vs. TAIR 10
Match: AT3G43850.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G21940.1); Has 215 Blast hits to 215 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 213; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 45.4 bits (106), Expect = 4.9e-05 Identity = 44/131 (33.59%), Postives = 64/131 (48.85%), Query Frame = 0
BLAST of CSPI02G22030 vs. TAIR 10
Match: AT5G21940.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G43850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 43.1 bits (100), Expect = 2.4e-04 Identity = 47/156 (30.13%), Postives = 77/156 (49.36%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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