CSPI02G19610 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI02G19610
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr2: 17727945 .. 17728574 (+)
RNA-Seq ExpressionCSPI02G19610
SyntenyCSPI02G19610
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AACAATTATAAATATAATATTTGCTTCAAACTGAAGCCGGCCGGATACAGAGCCCTTGTTCAGTTGTTCTGTTTCTGCCGTCGGTTTCCGCCGCACGATTCCCCATACCACCGCCCTCTGTTTCACTGTCCCCACCTATAAAAGCCCTCAACTTTTCCCCACTCCTCTTTTCAATTCTCATTCTTAATTTTCTCTAAAACAATGGCGGCTATGTCACCTCAACCTTATTCAGTCGAAAAAAAGATCGCCGGAGATCAAGTGGAGGCAGAGATAGAAACAGAGTCGGCGGCGGCGGATGCGGATGCGTTGGGCCCAGCTGTGACGAGGCATATTGTGGTCAAGTCTTCGTCTTCGTCTTCGTCCTATCAATCCAACCAAGCTCTAGAGAAAGCGGTGGTGCTGAGGCGGATCCGGCAACGGAAGCGTGTTAACAAGTTGAGGGCGGCGGTTGGAGCTCTGTTTAGTTCACCGTTCACTGATAAAACAGAGAGAAAATGGGTGGACGAACCGTTCACTTCACTCTAATTCCAATTTTGTTATAAAATTAAGAAATTAGTGGAAGAGGTCAGATTTTTCTTTTTTAAACTTATTTATCCATCCAAATCAGATTGCATTATAATGGCTTCGTTG

mRNA sequence

AACAATTATAAATATAATATTTGCTTCAAACTGAAGCCGGCCGGATACAGAGCCCTTGTTCAGTTGTTCTGTTTCTGCCGTCGGTTTCCGCCGCACGATTCCCCATACCACCGCCCTCTGTTTCACTGTCCCCACCTATAAAAGCCCTCAACTTTTCCCCACTCCTCTTTTCAATTCTCATTCTTAATTTTCTCTAAAACAATGGCGGCTATGTCACCTCAACCTTATTCAGTCGAAAAAAAGATCGCCGGAGATCAAGTGGAGGCAGAGATAGAAACAGAGTCGGCGGCGGCGGATGCGGATGCGTTGGGCCCAGCTGTGACGAGGCATATTGTGGTCAAGTCTTCGTCTTCGTCTTCGTCCTATCAATCCAACCAAGCTCTAGAGAAAGCGGTGGTGCTGAGGCGGATCCGGCAACGGAAGCGTGTTAACAAGTTGAGGGCGGCGGTTGGAGCTCTGTTTAGTTCACCGTTCACTGATAAAACAGAGAGAAAATGGGTGGACGAACCGTTCACTTCACTCTAATTCCAATTTTGTTATAAAATTAAGAAATTAGTGGAAGAGGTCAGATTTTTCTTTTTTAAACTTATTTATCCATCCAAATCAGATTGCATTATAATGGCTTCGTTG

Coding sequence (CDS)

ATGGCGGCTATGTCACCTCAACCTTATTCAGTCGAAAAAAAGATCGCCGGAGATCAAGTGGAGGCAGAGATAGAAACAGAGTCGGCGGCGGCGGATGCGGATGCGTTGGGCCCAGCTGTGACGAGGCATATTGTGGTCAAGTCTTCGTCTTCGTCTTCGTCCTATCAATCCAACCAAGCTCTAGAGAAAGCGGTGGTGCTGAGGCGGATCCGGCAACGGAAGCGTGTTAACAAGTTGAGGGCGGCGGTTGGAGCTCTGTTTAGTTCACCGTTCACTGATAAAACAGAGAGAAAATGGGTGGACGAACCGTTCACTTCACTCTAA

Protein sequence

MAAMSPQPYSVEKKIAGDQVEAEIETESAAADADALGPAVTRHIVVKSSSSSSSYQSNQALEKAVVLRRIRQRKRVNKLRAAVGALFSSPFTDKTERKWVDEPFTSL*
Homology
BLAST of CSPI02G19610 vs. ExPASy TrEMBL
Match: A0A0A0LNJ0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360760 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 1.9e-45
Identity = 106/109 (97.25%), Postives = 106/109 (97.25%), Query Frame = 0

Query: 1   MAAMSPQPYSVEKKIAGDQVEAEIETESAA--ADADALGPAVTRHIVVKSSSSSSSYQSN 60
           MAAMSPQPYSVEKKIAGDQVEAEIETESAA  A ADALGPAVTRHIVVKSSSSSSSYQSN
Sbjct: 1   MAAMSPQPYSVEKKIAGDQVEAEIETESAAAGAGADALGPAVTRHIVVKSSSSSSSYQSN 60

Query: 61  QALEKAVVLRRIRQRKRVNKLRAAVGALFSSPFTDKTERKWVDEPFTSL 108
           QALEKAVVLRRIRQRKRVNKLRAAVGALFSSPFTDKTERKWVDEPFTSL
Sbjct: 61  QALEKAVVLRRIRQRKRVNKLRAAVGALFSSPFTDKTERKWVDEPFTSL 109

BLAST of CSPI02G19610 vs. ExPASy TrEMBL
Match: A0A5A7VDJ5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G006120 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 4.0e-35
Identity = 93/111 (83.78%), Postives = 95/111 (85.59%), Query Frame = 0

Query: 1   MAAMSPQPYSVEKKIAGDQVEAEIETESAAADADALGPAVTRHIVVKSSSSSSSYQSNQA 60
           MAAMSP+PYSVEKKI GDQVEAEIETE +A    ALGPAVTRHIVVKSS S     SNQA
Sbjct: 1   MAAMSPRPYSVEKKIDGDQVEAEIETEVSA----ALGPAVTRHIVVKSSPS----HSNQA 60

Query: 61  LEKAVVLRRIRQRKRVNKLRAAVGALFSSPFTDKTE----RKWVDEPFTSL 108
           LEKAVVLRRIRQRKRVNKLRAAVGALFSSPFTDKTE    RKWVDEPFTSL
Sbjct: 61  LEKAVVLRRIRQRKRVNKLRAAVGALFSSPFTDKTEETHQRKWVDEPFTSL 103

BLAST of CSPI02G19610 vs. ExPASy TrEMBL
Match: A0A6P5MGE6 (uncharacterized protein LOC110274446 OS=Arachis duranensis OX=130453 GN=LOC110274446 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 1.0e-09
Identity = 46/104 (44.23%), Postives = 60/104 (57.69%), Query Frame = 0

Query: 4   MSPQPYSVEKKIAGDQVEAEIETESAAADADALGPAVTRHIVVKSSSSSSSYQSNQALEK 63
           MS     VE     ++ EAE E E +        P VT  + +K S +    Q    ++K
Sbjct: 1   MSSNDKKVEVSKGREEDEAEFEKEESV-------PTVTSKLFLKPSEN----QKPGNMDK 60

Query: 64  AVVLRRIRQRKRVNKLRAAVGALFSSPFTDKTERKWVDEPFTSL 108
            VVLRRIR R+RVNK+RAAVG+ FSSPF+    RKWVD+PF +L
Sbjct: 61  EVVLRRIRHRRRVNKVRAAVGSFFSSPFSTDHHRKWVDDPFAAL 93

BLAST of CSPI02G19610 vs. ExPASy TrEMBL
Match: A0A2C9VX00 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_05G166500 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 1.1e-05
Identity = 36/72 (50.00%), Postives = 44/72 (61.11%), Query Frame = 0

Query: 40  VTRHIVVKSSSSSSSYQSNQALEKAVVLRRIRQRKRVNKLRAAVGALF----SSPFTDKT 99
           VT H+++K +       SNQ L K VVLRRIRQRKR NK+RAAV   F    SS   D+ 
Sbjct: 40  VTSHVLLKPA------HSNQTLNKEVVLRRIRQRKRHNKVRAAVQGFFGLRDSSKTDDRV 99

Query: 100 ERKWVDEPFTSL 108
             KWVD+ F +L
Sbjct: 100 SVKWVDDAFAAL 105

BLAST of CSPI02G19610 vs. ExPASy TrEMBL
Match: A0A498HNN1 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_012832 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.5e-05
Identity = 37/71 (52.11%), Postives = 45/71 (63.38%), Query Frame = 0

Query: 38  PAVT-RHIVVKSSSSSSSYQSNQALEKAVVLRRIRQRKRVNKLRAAVGALFSSPFTDKT- 97
           PA T  H  V S        ++Q L+K VVLRRIRQRKRVN++RAA+ AL SSP +    
Sbjct: 34  PAETYEHNYVSSHVHIKPTHTSQPLDKEVVLRRIRQRKRVNRVRAALQALLSSPSSPSVQ 93

Query: 98  ERKWVDEPFTS 107
           E KWVD+ F S
Sbjct: 94  ENKWVDDAFAS 104

BLAST of CSPI02G19610 vs. NCBI nr
Match: KGN62559.1 (hypothetical protein Csa_022598 [Cucumis sativus])

HSP 1 Score: 191.4 bits (485), Expect = 4.0e-45
Identity = 106/109 (97.25%), Postives = 106/109 (97.25%), Query Frame = 0

Query: 1   MAAMSPQPYSVEKKIAGDQVEAEIETESAA--ADADALGPAVTRHIVVKSSSSSSSYQSN 60
           MAAMSPQPYSVEKKIAGDQVEAEIETESAA  A ADALGPAVTRHIVVKSSSSSSSYQSN
Sbjct: 1   MAAMSPQPYSVEKKIAGDQVEAEIETESAAAGAGADALGPAVTRHIVVKSSSSSSSYQSN 60

Query: 61  QALEKAVVLRRIRQRKRVNKLRAAVGALFSSPFTDKTERKWVDEPFTSL 108
           QALEKAVVLRRIRQRKRVNKLRAAVGALFSSPFTDKTERKWVDEPFTSL
Sbjct: 61  QALEKAVVLRRIRQRKRVNKLRAAVGALFSSPFTDKTERKWVDEPFTSL 109

BLAST of CSPI02G19610 vs. NCBI nr
Match: KAA0065270.1 (hypothetical protein E6C27_scaffold82G006120 [Cucumis melo var. makuwa])

HSP 1 Score: 157.1 bits (396), Expect = 8.3e-35
Identity = 93/111 (83.78%), Postives = 95/111 (85.59%), Query Frame = 0

Query: 1   MAAMSPQPYSVEKKIAGDQVEAEIETESAAADADALGPAVTRHIVVKSSSSSSSYQSNQA 60
           MAAMSP+PYSVEKKI GDQVEAEIETE +A    ALGPAVTRHIVVKSS S     SNQA
Sbjct: 1   MAAMSPRPYSVEKKIDGDQVEAEIETEVSA----ALGPAVTRHIVVKSSPS----HSNQA 60

Query: 61  LEKAVVLRRIRQRKRVNKLRAAVGALFSSPFTDKTE----RKWVDEPFTSL 108
           LEKAVVLRRIRQRKRVNKLRAAVGALFSSPFTDKTE    RKWVDEPFTSL
Sbjct: 61  LEKAVVLRRIRQRKRVNKLRAAVGALFSSPFTDKTEETHQRKWVDEPFTSL 103

BLAST of CSPI02G19610 vs. NCBI nr
Match: KAG6598407.1 (hypothetical protein SDJN03_08185, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 120.9 bits (302), Expect = 6.6e-24
Identity = 74/111 (66.67%), Postives = 82/111 (73.87%), Query Frame = 0

Query: 1   MAAMSPQPYSVEKKIAGDQVEAEIETESAAADADALGPAVTRHIVVKSSSSSSSYQSNQA 60
           MAAMSP P SVE  IAG Q EAE+E E+ AA   A+GP VTRHI+VKSS S     +  +
Sbjct: 1   MAAMSPHPCSVENSIAGAQEEAEMEMETEAA---AVGPDVTRHIMVKSSRS-----TQVS 60

Query: 61  LEKAVVLRRIRQRKRVNKLRAAVGALFSSPFTDKT----ERKWVDEPFTSL 108
           LEKAVVLRRIR RKRVNK +A VGALFSSPF DK     +RKWVDEPFTSL
Sbjct: 61  LEKAVVLRRIRHRKRVNKFQAVVGALFSSPFADKADETRQRKWVDEPFTSL 103

BLAST of CSPI02G19610 vs. NCBI nr
Match: KAG7029360.1 (Wall-associated receptor kinase-like 14, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 102.1 bits (253), Expect = 3.2e-18
Identity = 63/96 (65.62%), Postives = 71/96 (73.96%), Query Frame = 0

Query: 1  MAAMSPQPYSVEKKIAGDQVEAEIETESAAADADALGPAVTRHIVVKSSSSSSSYQSNQA 60
          MAAMSP P SVE  IAG Q EAE+E E+ AA   A+GP VTRHI+VKSS S     +  +
Sbjct: 1  MAAMSPHPCSVENSIAGAQEEAEMEMETEAA---AVGPDVTRHIMVKSSRS-----TQVS 60

Query: 61 LEKAVVLRRIRQRKRVNKLRAAVGALFSSPFTDKTE 97
          LEKAVVLRRIR RKRVNK +A VGALFSSPF DK +
Sbjct: 61 LEKAVVLRRIRHRKRVNKFQAVVGALFSSPFADKAD 88

BLAST of CSPI02G19610 vs. NCBI nr
Match: KAG6585633.1 (hypothetical protein SDJN03_18366, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020540.1 hypothetical protein SDJN02_17225, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 100.9 bits (250), Expect = 7.1e-18
Identity = 68/111 (61.26%), Postives = 73/111 (65.77%), Query Frame = 0

Query: 1   MAAMSPQPYSVEKKIAGDQVEAEIETESAAADADALGPAVTRHIVVKSSSSSSSYQSNQA 60
           MAA+SP  Y V     GDQ     E +   ADA A  P VTRHI +KSS       S Q 
Sbjct: 1   MAAVSPHSYPV-----GDQ-----EKDKTVADA-AASPDVTRHIRLKSS------HSTQV 60

Query: 61  LEKAVVLRRIRQRKRVNKLRAAVGALFSSPFTDKT----ERKWVDEPFTSL 108
           LEKAVVLRRIRQRKRVNK +A VGALFSSPF DKT    +RKWVDEPFTSL
Sbjct: 61  LEKAVVLRRIRQRKRVNKFQAVVGALFSSPFGDKTGEARQRKWVDEPFTSL 94

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LNJ01.9e-4597.25Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360760 PE=4 SV=1[more]
A0A5A7VDJ54.0e-3583.78Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A6P5MGE61.0e-0944.23uncharacterized protein LOC110274446 OS=Arachis duranensis OX=130453 GN=LOC11027... [more]
A0A2C9VX001.1e-0550.00Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_05G166500 PE=4 SV=... [more]
A0A498HNN11.5e-0552.11Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_012832 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KGN62559.14.0e-4597.25hypothetical protein Csa_022598 [Cucumis sativus][more]
KAA0065270.18.3e-3583.78hypothetical protein E6C27_scaffold82G006120 [Cucumis melo var. makuwa][more]
KAG6598407.16.6e-2466.67hypothetical protein SDJN03_08185, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7029360.13.2e-1865.63Wall-associated receptor kinase-like 14, partial [Cucurbita argyrosperma subsp. ... [more]
KAG6585633.17.1e-1861.26hypothetical protein SDJN03_18366, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35324BNAA08G03750D PROTEINcoord: 1..107
NoneNo IPR availablePANTHERPTHR35324:SF4BNAA08G03750D PROTEINcoord: 1..107

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI02G19610.1CSPI02G19610.1mRNA