CSPI02G19460 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI02G19460
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr2: 17653453 .. 17653749 (-)
RNA-Seq ExpressionCSPI02G19460
SyntenyCSPI02G19460
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACCCACGCCAGGCTGGAAAGGAATCTCACGTGAATCGAGTTGAATCTCTTTGACCTTTCGAGCCTATCCAACAGACTACAAATCTCCACTTCCCACTCCCTTACAGTGTGGCGTAAAACTTACATGCCTCAAAGTTTGCTCATTTCAAAGATCGTGCCATTCACGCTCTTAGGGATGGCACGTGTGCAATTTCTTCCGTTTGTAATTTGGACGGACCTGATTACATCAACGGAGCAACCGTGGCAGTACTCGCAGTCCACTGGAGCGTGATTCGAGTTTCGCGAGGCAGTTGA

mRNA sequence

ATGGACCCACGCCAGGCTGGAAAGGAATCTCACTTTGCTCATTTCAAAGATCGTGCCATTCACGCTCTTAGGGATGGCACGTGTGCAATTTCTTCCGTTTGTAATTTGGACGGACCTGATTACATCAACGGAGCAACCGTGGCAGTACTCGCAGTCCACTGGAGCGTGATTCGAGTTTCGCGAGGCAGTTGA

Coding sequence (CDS)

ATGGACCCACGCCAGGCTGGAAAGGAATCTCACTTTGCTCATTTCAAAGATCGTGCCATTCACGCTCTTAGGGATGGCACGTGTGCAATTTCTTCCGTTTGTAATTTGGACGGACCTGATTACATCAACGGAGCAACCGTGGCAGTACTCGCAGTCCACTGGAGCGTGATTCGAGTTTCGCGAGGCAGTTGA

Protein sequence

MDPRQAGKESHFAHFKDRAIHALRDGTCAISSVCNLDGPDYINGATVAVLAVHWSVIRVSRGS*
Homology
[Close]
BLAST of CSPI02G19460 vs. ExPASy TrEMBL
Match: A0A0A0LNI0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360610 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.7e-28
Identity = 62/63 (98.41%), Postives = 63/63 (100.00%), Query Frame = 0 

Query: 1  MDPRQAGKESHFAHFKDRAIHALRDGTCAISSVCNLDGPDYINGATVAVLAVHWSVIRVS 60
          MDPRQAGKESHFAHFKDRAIHALRDGTCA+SSVCNLDGPDYINGATVAVLAVHWSVIRVS
Sbjct: 1  MDPRQAGKESHFAHFKDRAIHALRDGTCAVSSVCNLDGPDYINGATVAVLAVHWSVIRVS 60

Query: 61 RGS 64
          RGS
Sbjct: 61 RGS 63

[Close]
BLAST of CSPI02G19460 vs. NCBI nr
Match: KGN62544.1 (hypothetical protein Csa_021881 [Cucumis sativus])

HSP 1 Score: 134.4 bits (337), Expect = 3.4e-28
Identity = 62/63 (98.41%), Postives = 63/63 (100.00%), Query Frame = 0 

Query: 1  MDPRQAGKESHFAHFKDRAIHALRDGTCAISSVCNLDGPDYINGATVAVLAVHWSVIRVS 60
          MDPRQAGKESHFAHFKDRAIHALRDGTCA+SSVCNLDGPDYINGATVAVLAVHWSVIRVS
Sbjct: 1  MDPRQAGKESHFAHFKDRAIHALRDGTCAVSSVCNLDGPDYINGATVAVLAVHWSVIRVS 60

Query: 61 RGS 64
          RGS
Sbjct: 61 RGS 63

The following BLAST results are available for this feature:
BLAST of CSPI02G19460 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI02G19460 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LNI01.7e-2898.41Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360610 PE=4 SV=1[more]
BLAST of CSPI02G19460 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN62544.13.4e-2898.41hypothetical protein Csa_021881 [Cucumis sativus][more]
BLAST of CSPI02G19460 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI02G19460.1CSPI02G19460.1mRNA