CSPI02G19200 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI02G19200
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr2: 17521477 .. 17521849 (-)
RNA-Seq ExpressionCSPI02G19200
SyntenyCSPI02G19200
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GGATATACAATTGAAATTAGGATTATTGAATTTACATCACCCATGTGCAATTCCTCCATGTTTCCTATTCTTCTCCCTCCTTTATACCTGCCACCAAAATTCAGATCGGATCAAACCCTTATTCCCACTTGGGCCATAACAAAGCAGCAGCCCAGCAACTTTGGGACTTTAAGTGTACGACAATATTCTACAAAAATTTGATAAATATAATGAAATTTATTAGCGATAAACTACTATAACTAATATATTCTTATAGTCACGTGATATTCGCAATAATTTTCTATCCAACAATAAGTGGCCTACGAAAGTTGATGGTGATGAAAAACGGCTGATAAATGAGGACGAATGGCGCATGATCGCTTCCAACGGGTGA

mRNA sequence

GGATATACAATTGAAATTAGGATTATTGAATTTACATCACCCATGTGCAATTCCTCCATGTTTCCTATTCTTCTCCCTCCTTTATACCTGCCACCAAAATTCAGATCGGATCAAACCCTTATTCCCACTTGGGCCATAACAAAGCAGCAGCCCAGCAACTTTGGGACTTTAAGTTCACGTGATATTCGCAATAATTTTCTATCCAACAATAAGTGGCCTACGAAAGTTGATGGTGATGAAAAACGGCTGATAAATGAGGACGAATGGCGCATGATCGCTTCCAACGGGTGA

Coding sequence (CDS)

ATGTGCAATTCCTCCATGTTTCCTATTCTTCTCCCTCCTTTATACCTGCCACCAAAATTCAGATCGGATCAAACCCTTATTCCCACTTGGGCCATAACAAAGCAGCAGCCCAGCAACTTTGGGACTTTAAGTTCACGTGATATTCGCAATAATTTTCTATCCAACAATAAGTGGCCTACGAAAGTTGATGGTGATGAAAAACGGCTGATAAATGAGGACGAATGGCGCATGATCGCTTCCAACGGGTGA

Protein sequence

MCNSSMFPILLPPLYLPPKFRSDQTLIPTWAITKQQPSNFGTLSSRDIRNNFLSNNKWPTKVDGDEKRLINEDEWRMIASNG*
Homology
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BLAST of CSPI02G19200 vs. ExPASy TrEMBL
Match: A0A0A0LL96 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G358885 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.1e-40
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0 

Query: 1  MCNSSMFPILLPPLYLPPKFRSDQTLIPTWAITKQQPSNFGTLSSRDIRNNFLSNNKWPT 60
          MCNSSMFPILLPPLYLPPKFRSDQTLIPTWAITKQQPSNFGTLSSRDIRNNFLSNNKWPT
Sbjct: 1  MCNSSMFPILLPPLYLPPKFRSDQTLIPTWAITKQQPSNFGTLSSRDIRNNFLSNNKWPT 60

Query: 61 KVDGDEKRLINEDEWRMIASNG 83
          KVDGDEKRLINEDEWRMIASNG
Sbjct: 61 KVDGDEKRLINEDEWRMIASNG 82

The following BLAST results are available for this feature:
BLAST of CSPI02G19200 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI02G19200 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LL961.1e-40100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G358885 PE=4 SV=1[more]
BLAST of CSPI02G19200 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
BLAST of CSPI02G19200 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI02G19200.1CSPI02G19200.1mRNA