CSPI02G15600 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI02G15600
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	VQ domain-containing protein
Location	Chr2: 15164341 .. 15165412 (-)
RNA-Seq Expression	CSPI02G15600
Synteny	CSPI02G15600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTATTTAATTCCCCCAACCACATTGCTTCTCAACTCTCTCCTCTCCTCTCCTCTCCTCCAATTATTACAAACAAAACCCCCAAAATTAACCCAATTTTCCATTTCTCCTCCCCCGGATCCTCACGTCCTCCGATCCGATTCCCCGCCAGATCCGTCATGAATCCGCCGGGATATTCCGCCGCCGGCAGCCCCACTACCCCCAGAAAGAAAGAGATCCAGCTACAAGGTCCTCGTCCACCTCAACTCCGCGTCAGTCAAGAATCTCGTAAAATCAAGAAGCCACCACCGCATCCTCAGCCGGTTCCCCAACCTGGCCGGCCTCCTCTCCCACCGGGTCCTTCCCAATGGCCTCAACCCCTTATAATCTACGACATCTCCCCCAAAGTCATCCACGTCGCGGAGAATAACTTCATGTCCGTCGTTCAACGCCTCACTGGACAATCCTCCACCGCCGTAACCGATGGCGACCTCTCCCCGGCGGCTAGACTGGCTACAATCGAGAAAGCTAGTCCCCGATCCGAAAGAGAGAGAGAAATCAACGTTAGTGATATGATGGATTTGGCAGAGGTTTCGGTGGAATTAGGGCAAATCCCAGGAATCTTATCACCGGCTCCGGGAACTCTAGCTCCGATTCCTACCGGGTATTTCTCGCCGGCGATTGAACCACAAAGCTTTTCTTATTCATTGTTTCATGAATTGAGTCCTCATTGGGCAAGCCCTTCTGCTCTGTTCTCAACCCCTTTGATTTCCCCAATTTCTTCACCAAATATCTTCAACAATCTCTTTGACATTTAGCTAAGTTCATCTCTCTCTCTCTCTTTCTCTTTCTCTCTAAACTATTAATCTCCATTGCCAATGTTCTTCAAAAGAGGAATCTTGGGTTTTTTTTCTTCTTCTTACTTTTGTAAAGTAGGTAATTGTAATTTGTATAACATTTTTCCATTTTGGCAATTCATTAATTACCCTAAAAAGATGTAGTTTTTGTTACAAAAAATGTAGCTCTTCTTCTCCCCATTTTTTCCCCCTTCATGTTATAAACAAAATAAATACCATTTTTAACACTTAAATGTG

mRNA sequence

TTTATTTAATTCCCCCAACCACATTGCTTCTCAACTCTCTCCTCTCCTCTCCTCTCCTCCAATTATTACAAACAAAACCCCCAAAATTAACCCAATTTTCCATTTCTCCTCCCCCGGATCCTCACGTCCTCCGATCCGATTCCCCGCCAGATCCGTCATGAATCCGCCGGGATATTCCGCCGCCGGCAGCCCCACTACCCCCAGAAAGAAAGAGATCCAGCTACAAGGTCCTCGTCCACCTCAACTCCGCGTCAGTCAAGAATCTCGTAAAATCAAGAAGCCACCACCGCATCCTCAGCCGGTTCCCCAACCTGGCCGGCCTCCTCTCCCACCGGGTCCTTCCCAATGGCCTCAACCCCTTATAATCTACGACATCTCCCCCAAAGTCATCCACGTCGCGGAGAATAACTTCATGTCCGTCGTTCAACGCCTCACTGGACAATCCTCCACCGCCGTAACCGATGGCGACCTCTCCCCGGCGGCTAGACTGGCTACAATCGAGAAAGCTAGTCCCCGATCCGAAAGAGAGAGAGAAATCAACGTTAGTGATATGATGGATTTGGCAGAGGTTTCGGTGGAATTAGGGCAAATCCCAGGAATCTTATCACCGGCTCCGGGAACTCTAGCTCCGATTCCTACCGGGTATTTCTCGCCGGCGATTGAACCACAAAGCTTTTCTTATTCATTGTTTCATGAATTGAGTCCTCATTGGGCAAGCCCTTCTGCTCTGTTCTCAACCCCTTTGATTTCCCCAATTTCTTCACCAAATATCTTCAACAATCTCTTTGACATTTAGCTAAGTTCATCTCTCTCTCTCTCTTTCTCTTTCTCTCTAAACTATTAATCTCCATTGCCAATGTTCTTCAAAAGAGGAATCTTGGGTTTTTTTTCTTCTTCTTACTTTTGTAAAGTAGGTAATTGTAATTTGTATAACATTTTTCCATTTTGGCAATTCATTAATTACCCTAAAAAGATGTAGTTTTTGTTACAAAAAATGTAGCTCTTCTTCTCCCCATTTTTTCCCCCTTCATGTTATAAACAAAATAAATACCATTTTTAACACTTAAATGTG

Coding sequence (CDS)

ATGAATCCGCCGGGATATTCCGCCGCCGGCAGCCCCACTACCCCCAGAAAGAAAGAGATCCAGCTACAAGGTCCTCGTCCACCTCAACTCCGCGTCAGTCAAGAATCTCGTAAAATCAAGAAGCCACCACCGCATCCTCAGCCGGTTCCCCAACCTGGCCGGCCTCCTCTCCCACCGGGTCCTTCCCAATGGCCTCAACCCCTTATAATCTACGACATCTCCCCCAAAGTCATCCACGTCGCGGAGAATAACTTCATGTCCGTCGTTCAACGCCTCACTGGACAATCCTCCACCGCCGTAACCGATGGCGACCTCTCCCCGGCGGCTAGACTGGCTACAATCGAGAAAGCTAGTCCCCGATCCGAAAGAGAGAGAGAAATCAACGTTAGTGATATGATGGATTTGGCAGAGGTTTCGGTGGAATTAGGGCAAATCCCAGGAATCTTATCACCGGCTCCGGGAACTCTAGCTCCGATTCCTACCGGGTATTTCTCGCCGGCGATTGAACCACAAAGCTTTTCTTATTCATTGTTTCATGAATTGAGTCCTCATTGGGCAAGCCCTTCTGCTCTGTTCTCAACCCCTTTGATTTCCCCAATTTCTTCACCAAATATCTTCAACAATCTCTTTGACATTTAG

Protein sequence

MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPQPGRPPLPPGPSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVTDGDLSPAARLATIEKASPRSEREREINVSDMMDLAEVSVELGQIPGILSPAPGTLAPIPTGYFSPAIEPQSFSYSLFHELSPHWASPSALFSTPLISPISSPNIFNNLFDI*

Homology

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BLAST of CSPI02G15600 vs. ExPASy Swiss-Prot
Match: Q8LGD5 (Protein MKS1 OS=Arabidopsis thaliana OX=3702 GN=MKS1 PE=1 SV=2)

HSP 1 Score: 118.6 bits (296), Expect = 8.5e-26
Identity = 91/216 (42.13%), Postives = 121/216 (56.02%), Query Frame = 0


Query: 1   MNPPGYSAAGSPTTP--RKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPQPGRPPLP 60
           M+P  Y A G+P+    +K+++Q+ GPRP  L V ++S KIKKPP HP P P   +PP  
Sbjct: 1   MDPSEYFAGGNPSDQQNQKRQLQICGPRPSPLSVHKDSHKIKKPPKHPAPPPNRDQPP-- 60

Query: 61  PGPSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVTD----GDLSPAARLATI 120
             P    +P++IY +SPKV+H   + FM+VVQRLTG SS    +    GD+SPAARLA+ 
Sbjct: 61  --PYIPREPVVIYAVSPKVVHATASEFMNVVQRLTGISSGVFLESGGGGDVSPAARLAST 120

Query: 121 EKASPRSERE---REINVSDMMDLAEVSVELGQIPGILSPAPGTLAPIPTGYFSPAIEPQ 180
           E ASPR  +E   R+  V     + E +   G  PGILSP+P  L    TG FSP     
Sbjct: 121 ENASPRGGKEPAARDETVEINTAMEEAAEFGGYAPGILSPSPALLPTASTGIFSP----- 180

Query: 181 SFSYSLFHE---LSPHWASPSALFS-TPLISPISSP 204
                ++H+    SP  A P  LFS    +SP  SP
Sbjct: 181 -----MYHQGGMFSP--AIPLGLFSPAGFMSPFRSP 200

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BLAST of CSPI02G15600 vs. ExPASy Swiss-Prot
Match: F4HWF9 (Nuclear speckle RNA-binding protein B OS=Arabidopsis thaliana OX=3702 GN=NSRB PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.2e-10
Identity = 63/180 (35.00%), Postives = 82/180 (45.56%), Query Frame = 0


Query: 24  GPRPPQLRVSQESRK-IKKP---PPHPQPVPQPGRPPLPPGPSQWPQPLIIYDISPKVIH 83
           GP+P  L+V  +S K IKKP   PPHPQP P       P      P P+ IY ++P++IH
Sbjct: 13  GPKPTPLKVRGDSHKIIKKPPLAPPHPQPQPPQTHQQEPSQSRPPPGPVNIYTVTPRIIH 72

Query: 84  VAENNFMSVVQRLTGQSSTAVTD---------------------GDLSPAARLATIEKAS 143
              NNFM++VQRLTGQ+ST+ T                      G +SPAAR A  EKA+
Sbjct: 73  THPNNFMTLVQRLTGQTSTSTTSSSSSSSTSEPKDTSTMVDTSHGLISPAARFAVTEKAN 132

Query: 144 PRSEREREINVSDMMDLAEVSVELGQ-------------IPGILSPAPGTLAPIPTGYFS 166
             +E    +     MD         Q               GILSP P +L  +   +FS
Sbjct: 133 ISNELGTFVGGEGTMDQYYHHHHQEQPHQNRGFERPSFHHAGILSPGPYSLPSVSPDFFS 192

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BLAST of CSPI02G15600 vs. ExPASy TrEMBL
Match: A0A0A0LK21 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G302100 PE=4 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 1.8e-111
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0


Query: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPQPGRPPLPPG 60
           MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPQPGRPPLPPG
Sbjct: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPQPGRPPLPPG 60

Query: 61  PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVTDGDLSPAARLATIEKASPR 120
           PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVTDGDLSPAARLATIEKASPR
Sbjct: 61  PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVTDGDLSPAARLATIEKASPR 120

Query: 121 SEREREINVSDMMDLAEVSVELGQIPGILSPAPGTLAPIPTGYFSPAIEPQSFSYSLFHE 180
           SEREREINVSDMMDLAEVSVELGQIPGILSPAPGTLAPIPTGYFSPAIEPQSFSYSLFHE
Sbjct: 121 SEREREINVSDMMDLAEVSVELGQIPGILSPAPGTLAPIPTGYFSPAIEPQSFSYSLFHE 180

Query: 181 LSPHWASPSALFSTPLISPISSPNIFNNLFDI 213
           LSPHWASPSALFSTPLISPISSPNIFNNLFDI
Sbjct: 181 LSPHWASPSALFSTPLISPISSPNIFNNLFDI 212

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BLAST of CSPI02G15600 vs. ExPASy TrEMBL
Match: A0A5A7TBE4 (Protein MKS1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold680G00750 PE=4 SV=1)

HSP 1 Score: 406.4 bits (1043), Expect = 7.5e-110
Identity = 209/211 (99.05%), Postives = 209/211 (99.05%), Query Frame = 0


Query: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPQPGRPPLPPG 60
           MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVP PGRPPLPPG
Sbjct: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPPPGRPPLPPG 60

Query: 61  PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVTDGDLSPAARLATIEKASPR 120
           PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVTDGDLSPAARLATIEKASPR
Sbjct: 61  PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVTDGDLSPAARLATIEKASPR 120

Query: 121 SEREREINVSDMMDLAEVSVELGQIPGILSPAPGTLAPIPTGYFSPAIEPQSFSYSLFHE 180
           SEREREINVSDMMDLAEVSVELGQIPGILSPAPGTLAPIPTGYFSPAIEPQSFSYSLFHE
Sbjct: 121 SEREREINVSDMMDLAEVSVELGQIPGILSPAPGTLAPIPTGYFSPAIEPQSFSYSLFHE 180

Query: 181 LSPHWASPSALFSTPLISPISSPNIFNNLFD 212
           LSPHW SPSALFSTPLISPISSPNIFNNLFD
Sbjct: 181 LSPHWPSPSALFSTPLISPISSPNIFNNLFD 211

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BLAST of CSPI02G15600 vs. ExPASy TrEMBL
Match: A0A1S3CD17 (protein MKS1-like OS=Cucumis melo OX=3656 GN=LOC103499649 PE=4 SV=1)

HSP 1 Score: 406.4 bits (1043), Expect = 7.5e-110
Identity = 209/211 (99.05%), Postives = 209/211 (99.05%), Query Frame = 0


Query: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPQPGRPPLPPG 60
           MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVP PGRPPLPPG
Sbjct: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPPPGRPPLPPG 60

Query: 61  PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVTDGDLSPAARLATIEKASPR 120
           PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVTDGDLSPAARLATIEKASPR
Sbjct: 61  PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVTDGDLSPAARLATIEKASPR 120

Query: 121 SEREREINVSDMMDLAEVSVELGQIPGILSPAPGTLAPIPTGYFSPAIEPQSFSYSLFHE 180
           SEREREINVSDMMDLAEVSVELGQIPGILSPAPGTLAPIPTGYFSPAIEPQSFSYSLFHE
Sbjct: 121 SEREREINVSDMMDLAEVSVELGQIPGILSPAPGTLAPIPTGYFSPAIEPQSFSYSLFHE 180

Query: 181 LSPHWASPSALFSTPLISPISSPNIFNNLFD 212
           LSPHW SPSALFSTPLISPISSPNIFNNLFD
Sbjct: 181 LSPHWPSPSALFSTPLISPISSPNIFNNLFD 211

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BLAST of CSPI02G15600 vs. ExPASy TrEMBL
Match: A0A6J1G715 (protein MKS1-like OS=Cucurbita moschata OX=3662 GN=LOC111451450 PE=4 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 3.2e-92
Identity = 181/212 (85.38%), Postives = 191/212 (90.09%), Query Frame = 0


Query: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPQPGRPPLPPG 60
           MNPPG SA GSP TPRKKEIQLQGPRPPQLRV+QESRKIKKPPPHPQP+P  GRPPLPP 
Sbjct: 1   MNPPGSSAGGSPNTPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLPPA 60

Query: 61  PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTA-VTDGDLSPAARLATIEKASP 120
            SQWPQPLIIYDISPKV+HVAENNFMSVVQRLTG SS A  TDGDLSPAAR ATIEKASP
Sbjct: 61  ASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSSAASSTDGDLSPAARFATIEKASP 120

Query: 121 RSEREREINVSDMMDLAEVSVELGQIPGILSPAPGTLAPIPTGYFSPAIEPQSFSYSLFH 180
           RSEREREI+VSDMMDL EV VELGQ PGILSPAP +LAPI +G+FSPAIEPQSF+YSL H
Sbjct: 121 RSEREREIDVSDMMDLTEVPVELGQNPGILSPAPASLAPISSGFFSPAIEPQSFTYSLIH 180

Query: 181 ELSPHWASPSALFSTPLISPISSPNIFNNLFD 212
           ELSPHW SPSALF  PL+SPISSPNIFN+LFD
Sbjct: 181 ELSPHWPSPSALFPAPLVSPISSPNIFNHLFD 212

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BLAST of CSPI02G15600 vs. ExPASy TrEMBL
Match: A0A6J1L2G0 (protein MKS1-like OS=Cucurbita maxima OX=3661 GN=LOC111499788 PE=4 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 1.6e-88
Identity = 176/212 (83.02%), Postives = 188/212 (88.68%), Query Frame = 0


Query: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPQPGRPPLPPG 60
           MNPPG SA GSP TPRKKEIQLQGPRPPQLRV+QESRKIKKPPPHPQP+P  GRPPLPP 
Sbjct: 1   MNPPGSSAGGSPNTPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLPPA 60

Query: 61  PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSS-TAVTDGDLSPAARLATIEKASP 120
            SQWPQPLIIYDISPKV+HVAENNFMSVVQRLTG SS ++  DGDLSPAAR ATIEKASP
Sbjct: 61  ASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSSASSSADGDLSPAARFATIEKASP 120

Query: 121 RSEREREINVSDMMDLAEVSVELGQIPGILSPAPGTLAPIPTGYFSPAIEPQSFSYSLFH 180
           RS  EREI+VSDMMDL EV VELGQ PGILSPAP +LAPI +G+FSP IEPQSF+YSL H
Sbjct: 121 RS--EREIDVSDMMDLTEVPVELGQTPGILSPAPASLAPISSGFFSPVIEPQSFTYSLIH 180

Query: 181 ELSPHWASPSALFSTPLISPISSPNIFNNLFD 212
           ELSPHW SPSALF  PL+SPISSPNIFN+LFD
Sbjct: 181 ELSPHWPSPSALFPAPLVSPISSPNIFNHLFD 210

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BLAST of CSPI02G15600 vs. NCBI nr
Match: XP_011649396.1 (protein MKS1 [Cucumis sativus] >KGN62143.1 hypothetical protein Csa_006357 [Cucumis sativus])

HSP 1 Score: 411.8 bits (1057), Expect = 3.7e-111
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0


Query: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPQPGRPPLPPG 60
           MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPQPGRPPLPPG
Sbjct: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPQPGRPPLPPG 60

Query: 61  PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVTDGDLSPAARLATIEKASPR 120
           PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVTDGDLSPAARLATIEKASPR
Sbjct: 61  PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVTDGDLSPAARLATIEKASPR 120

Query: 121 SEREREINVSDMMDLAEVSVELGQIPGILSPAPGTLAPIPTGYFSPAIEPQSFSYSLFHE 180
           SEREREINVSDMMDLAEVSVELGQIPGILSPAPGTLAPIPTGYFSPAIEPQSFSYSLFHE
Sbjct: 121 SEREREINVSDMMDLAEVSVELGQIPGILSPAPGTLAPIPTGYFSPAIEPQSFSYSLFHE 180

Query: 181 LSPHWASPSALFSTPLISPISSPNIFNNLFDI 213
           LSPHWASPSALFSTPLISPISSPNIFNNLFDI
Sbjct: 181 LSPHWASPSALFSTPLISPISSPNIFNNLFDI 212

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BLAST of CSPI02G15600 vs. NCBI nr
Match: XP_008460908.1 (PREDICTED: protein MKS1-like [Cucumis melo] >KAA0040772.1 protein MKS1-like [Cucumis melo var. makuwa] >TYK02088.1 protein MKS1-like [Cucumis melo var. makuwa])

HSP 1 Score: 406.4 bits (1043), Expect = 1.5e-109
Identity = 209/211 (99.05%), Postives = 209/211 (99.05%), Query Frame = 0


Query: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPQPGRPPLPPG 60
           MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVP PGRPPLPPG
Sbjct: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPPPGRPPLPPG 60

Query: 61  PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVTDGDLSPAARLATIEKASPR 120
           PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVTDGDLSPAARLATIEKASPR
Sbjct: 61  PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVTDGDLSPAARLATIEKASPR 120

Query: 121 SEREREINVSDMMDLAEVSVELGQIPGILSPAPGTLAPIPTGYFSPAIEPQSFSYSLFHE 180
           SEREREINVSDMMDLAEVSVELGQIPGILSPAPGTLAPIPTGYFSPAIEPQSFSYSLFHE
Sbjct: 121 SEREREINVSDMMDLAEVSVELGQIPGILSPAPGTLAPIPTGYFSPAIEPQSFSYSLFHE 180

Query: 181 LSPHWASPSALFSTPLISPISSPNIFNNLFD 212
           LSPHW SPSALFSTPLISPISSPNIFNNLFD
Sbjct: 181 LSPHWPSPSALFSTPLISPISSPNIFNNLFD 211

[Close]

BLAST of CSPI02G15600 vs. NCBI nr
Match: XP_038901805.1 (protein MKS1-like [Benincasa hispida])

HSP 1 Score: 375.6 bits (963), Expect = 2.9e-100
Identity = 196/214 (91.59%), Postives = 201/214 (93.93%), Query Frame = 0


Query: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPQPGRPPLPPG 60
           MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRV+QESRKIKKPPPHPQPVP  GRPPLPPG
Sbjct: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPVPPGGRPPLPPG 60

Query: 61  PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSST---AVTDGDLSPAARLATIEKA 120
           P+QWPQPLIIYDISPKVIHVAENNFMSVVQRLTG SS+   A TDGDLSPAARLATIEKA
Sbjct: 61  PAQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGLSSSSAAAATDGDLSPAARLATIEKA 120

Query: 121 SPRSEREREINVSDMMDLAEVSVELGQIPGILSPAPGTLAPIPTGYFSPAIEPQSFSYSL 180
           SPRSEREREINVSDMMDLAEVSVELGQIPGILSPAP TLAPIPTGYFSPAIE QS +YSL
Sbjct: 121 SPRSEREREINVSDMMDLAEVSVELGQIPGILSPAPATLAPIPTGYFSPAIEHQSLAYSL 180

Query: 181 FHELSPHWASPSALFSTPLISPISSPNIFNNLFD 212
            HELSPHW SPSALFS PL+SPISSPNIFNNLFD
Sbjct: 181 IHELSPHWPSPSALFSAPLVSPISSPNIFNNLFD 214

[Close]

BLAST of CSPI02G15600 vs. NCBI nr
Match: XP_022947651.1 (protein MKS1-like [Cucurbita moschata])

HSP 1 Score: 347.8 bits (891), Expect = 6.5e-92
Identity = 181/212 (85.38%), Postives = 191/212 (90.09%), Query Frame = 0


Query: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPQPGRPPLPPG 60
           MNPPG SA GSP TPRKKEIQLQGPRPPQLRV+QESRKIKKPPPHPQP+P  GRPPLPP 
Sbjct: 1   MNPPGSSAGGSPNTPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLPPA 60

Query: 61  PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTA-VTDGDLSPAARLATIEKASP 120
            SQWPQPLIIYDISPKV+HVAENNFMSVVQRLTG SS A  TDGDLSPAAR ATIEKASP
Sbjct: 61  ASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSSAASSTDGDLSPAARFATIEKASP 120

Query: 121 RSEREREINVSDMMDLAEVSVELGQIPGILSPAPGTLAPIPTGYFSPAIEPQSFSYSLFH 180
           RSEREREI+VSDMMDL EV VELGQ PGILSPAP +LAPI +G+FSPAIEPQSF+YSL H
Sbjct: 121 RSEREREIDVSDMMDLTEVPVELGQNPGILSPAPASLAPISSGFFSPAIEPQSFTYSLIH 180

Query: 181 ELSPHWASPSALFSTPLISPISSPNIFNNLFD 212
           ELSPHW SPSALF  PL+SPISSPNIFN+LFD
Sbjct: 181 ELSPHWPSPSALFPAPLVSPISSPNIFNHLFD 212

[Close]

BLAST of CSPI02G15600 vs. NCBI nr
Match: XP_023533977.1 (protein MKS1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 345.5 bits (885), Expect = 3.2e-91
Identity = 180/212 (84.91%), Postives = 191/212 (90.09%), Query Frame = 0


Query: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPQPGRPPLPPG 60
           MNP G SA GSP TPRKKEIQLQGPRPPQLRV+QESRKIKKPPPHPQP+P  GRPPLPP 
Sbjct: 1   MNPAGSSAGGSPNTPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLPPA 60

Query: 61  PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSST-AVTDGDLSPAARLATIEKASP 120
            SQWPQPLIIYDISPKV+HVAENNFMSVVQRLTG SST + TDGDLSPAAR ATIEKASP
Sbjct: 61  ASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSSTSSSTDGDLSPAARFATIEKASP 120

Query: 121 RSEREREINVSDMMDLAEVSVELGQIPGILSPAPGTLAPIPTGYFSPAIEPQSFSYSLFH 180
           RSEREREI+VSDMMDL EV VELGQ PGILSPAP +LAPI +G+FSPAIEPQSF+YSL H
Sbjct: 121 RSEREREIDVSDMMDLTEVPVELGQNPGILSPAPASLAPISSGFFSPAIEPQSFTYSLIH 180

Query: 181 ELSPHWASPSALFSTPLISPISSPNIFNNLFD 212
           ELSPHW SPSALF  PL+SPISSPNIFN+LFD
Sbjct: 181 ELSPHWPSPSALFPAPLVSPISSPNIFNHLFD 212

[Close]

BLAST of CSPI02G15600 vs. TAIR 10
Match: AT3G18690.1 (MAP kinase substrate 1 )

HSP 1 Score: 118.6 bits (296), Expect = 6.0e-27
Identity = 91/216 (42.13%), Postives = 121/216 (56.02%), Query Frame = 0


Query: 1   MNPPGYSAAGSPTTP--RKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPQPGRPPLP 60
           M+P  Y A G+P+    +K+++Q+ GPRP  L V ++S KIKKPP HP P P   +PP  
Sbjct: 1   MDPSEYFAGGNPSDQQNQKRQLQICGPRPSPLSVHKDSHKIKKPPKHPAPPPNRDQPP-- 60

Query: 61  PGPSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVTD----GDLSPAARLATI 120
             P    +P++IY +SPKV+H   + FM+VVQRLTG SS    +    GD+SPAARLA+ 
Sbjct: 61  --PYIPREPVVIYAVSPKVVHATASEFMNVVQRLTGISSGVFLESGGGGDVSPAARLAST 120

Query: 121 EKASPRSERE---REINVSDMMDLAEVSVELGQIPGILSPAPGTLAPIPTGYFSPAIEPQ 180
           E ASPR  +E   R+  V     + E +   G  PGILSP+P  L    TG FSP     
Sbjct: 121 ENASPRGGKEPAARDETVEINTAMEEAAEFGGYAPGILSPSPALLPTASTGIFSP----- 180

Query: 181 SFSYSLFHE---LSPHWASPSALFS-TPLISPISSP 204
                ++H+    SP  A P  LFS    +SP  SP
Sbjct: 181 -----MYHQGGMFSP--AIPLGLFSPAGFMSPFRSP 200

[Close]

BLAST of CSPI02G15600 vs. TAIR 10
Match: AT1G21326.1 (VQ motif-containing protein )

HSP 1 Score: 80.9 bits (198), Expect = 1.4e-15
Identity = 83/242 (34.30%), Postives = 112/242 (46.28%), Query Frame = 0


Query: 14  TPRKKEIQLQGPRPPQLRVSQESRK-IKKP---PPHPQPVPQPGRPPLPPGPSQWPQPLI 73
           +PR + I   GPRP  L+V  +S K IKKP   PPHPQP P       P      P P+I
Sbjct: 5   SPRSRGI--LGPRPIPLKVRGDSHKIIKKPPLAPPHPQPQPPQTHQQEPSQSRPPPGPVI 64

Query: 74  IYDISPKVIHVAENNFMSVVQRLTGQSSTAVTD---------------------GDLSPA 133
           IY +SP++IH   NNFM++VQRLTG++ST+ T                      G +SPA
Sbjct: 65  IYTVSPRIIHTHPNNFMTLVQRLTGKTSTSTTSSSYSSSTSAPKDASTMVDTSHGLISPA 124

Query: 134 ARLATIEKASPRSEREREINVSDMMD-----------LAEVSVELG------QIPGILSP 193
           AR A  EKA+  +E    +     MD             +     G         GILSP
Sbjct: 125 ARFAVTEKANISNELGTFVGGEGTMDQYYHYHHHHHHQEQQHQNQGFERPSFHHAGILSP 184

Query: 194 APGTLAPIPTGYFSP--AIEPQSFSYSLFHELSPHWASPSALFSTPLISPISSPNIFNNL 212
            P +L  +   +FS     +PQ FS S F++ +    S  +   +P     SS ++FNN 
Sbjct: 185 GPNSLPSVSPDFFSTIGPTDPQGFS-SFFNDFNSILQSSPSKIQSP-----SSMDLFNNF 238

[Close]

BLAST of CSPI02G15600 vs. TAIR 10
Match: AT1G21320.1 (nucleotide binding;nucleic acid binding )

HSP 1 Score: 67.4 bits (163), Expect = 1.6e-11
Identity = 63/180 (35.00%), Postives = 82/180 (45.56%), Query Frame = 0


Query: 24  GPRPPQLRVSQESRK-IKKP---PPHPQPVPQPGRPPLPPGPSQWPQPLIIYDISPKVIH 83
           GP+P  L+V  +S K IKKP   PPHPQP P       P      P P+ IY ++P++IH
Sbjct: 13  GPKPTPLKVRGDSHKIIKKPPLAPPHPQPQPPQTHQQEPSQSRPPPGPVNIYTVTPRIIH 72

Query: 84  VAENNFMSVVQRLTGQSSTAVTD---------------------GDLSPAARLATIEKAS 143
              NNFM++VQRLTGQ+ST+ T                      G +SPAAR A  EKA+
Sbjct: 73  THPNNFMTLVQRLTGQTSTSTTSSSSSSSTSEPKDTSTMVDTSHGLISPAARFAVTEKAN 132

Query: 144 PRSEREREINVSDMMDLAEVSVELGQ-------------IPGILSPAPGTLAPIPTGYFS 166
             +E    +     MD         Q               GILSP P +L  +   +FS
Sbjct: 133 ISNELGTFVGGEGTMDQYYHHHHQEQPHQNRGFERPSFHHAGILSPGPYSLPSVSPDFFS 192

[Close]

BLAST of CSPI02G15600 vs. TAIR 10
Match: AT3G18360.1 (VQ motif-containing protein )

HSP 1 Score: 41.6 bits (96), Expect = 9.3e-04
Identity = 27/72 (37.50%), Postives = 41/72 (56.94%), Query Frame = 0


Query: 25  PRPPQLRVSQESRKIKKPPPHPQPVPQPGRPPLPPGPSQWPQPLIIYDISPKVIHVAENN 84
           P PP L+V+++S  IKK PP P       +P           P+IIY  +P++IH    +
Sbjct: 41  PSPPTLKVNKDSHVIKK-PPSPSSFSSAAKP---------RHPVIIYTHTPRIIHTNPKD 100

Query: 85  FMSVVQRLTGQS 97
           FM++VQ+LTG +
Sbjct: 101 FMALVQKLTGMT 102

The following BLAST results are available for this feature:

BLAST of CSPI02G15600 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LGD5	8.5e-26	42.13	Protein MKS1 OS=Arabidopsis thaliana OX=3702 GN=MKS1 PE=1 SV=2	[more]
F4HWF9	2.2e-10	35.00	Nuclear speckle RNA-binding protein B OS=Arabidopsis thaliana OX=3702 GN=NSRB PE...	[more]

BLAST of CSPI02G15600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LK21	1.8e-111	100.00	VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G302100 PE=4 SV=...	[more]
A0A5A7TBE4	7.5e-110	99.05	Protein MKS1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold680G00...	[more]
A0A1S3CD17	7.5e-110	99.05	protein MKS1-like OS=Cucumis melo OX=3656 GN=LOC103499649 PE=4 SV=1	[more]
A0A6J1G715	3.2e-92	85.38	protein MKS1-like OS=Cucurbita moschata OX=3662 GN=LOC111451450 PE=4 SV=1	[more]
A0A6J1L2G0	1.6e-88	83.02	protein MKS1-like OS=Cucurbita maxima OX=3661 GN=LOC111499788 PE=4 SV=1	[more]

BLAST of CSPI02G15600 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011649396.1	3.7e-111	100.00	protein MKS1 [Cucumis sativus] >KGN62143.1 hypothetical protein Csa_006357 [Cucu...	[more]
XP_008460908.1	1.5e-109	99.05	PREDICTED: protein MKS1-like [Cucumis melo] >KAA0040772.1 protein MKS1-like [Cuc...	[more]
XP_038901805.1	2.9e-100	91.59	protein MKS1-like [Benincasa hispida]	[more]
XP_022947651.1	6.5e-92	85.38	protein MKS1-like [Cucurbita moschata]	[more]
XP_023533977.1	3.2e-91	84.91	protein MKS1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CSPI02G15600 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18690.1	6.0e-27	42.13	MAP kinase substrate 1	[more]
AT1G21326.1	1.4e-15	34.30	VQ motif-containing protein	[more]
AT1G21320.1	1.6e-11	35.00	nucleotide binding;nucleic acid binding	[more]
AT3G18360.1	9.3e-04	37.50	VQ motif-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008889	VQ	PFAM	PF05678	VQ	coord: 73..98 e-value: 4.8E-11 score: 41.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..63
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..63
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..18
None	No IPR available	PANTHER	PTHR33143:SF50	PROTEIN MKS1	coord: 9..206
IPR039607	VQ motif-containing protein 8/17/18/20/21/25	PANTHER	PTHR33143	F16F4.1 PROTEIN-RELATED	coord: 9..206

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G15600.1	CSPI02G15600.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus