CSPI02G15570 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI02G15570
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr2: 15154876 .. 15155276 (+)
RNA-Seq ExpressionCSPI02G15570
SyntenyCSPI02G15570
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGGAGAAGCTGAAACCCCAGAAAACCCTCTCCGGCGGCCGTCGTATTTTCTCTTTGCTTCCTTCTCTCAATCTCACATCTTCTTTCTTTCAGGTAAAATTGTTATTCTCTAATCTTCTTTTCACTTTCAATTACCTTCCCTTTTAATTTTCATTCTATTGAAGAAACCCAAACTTCTGGATTCTGGATTCTGGATTCATTCCCTTTCGCATTGCTTCAATCCGAAGTGTTATGGCTATGATGAGATCCGCCTCCGCGGTTGCTCTTCGTGGCCTCAGGAGGTTCTCTTCCCGAAGGCCAGTTTCTTCTCCAATCAATCAGGCACTGGAACTACCCACCTCCGTTTCTGGCAAGTCTCTCTTCCCATTTCTGTTACTTTCTTCGTCTTTTCATTTTGA

mRNA sequence

ATGTTGGAGAAGCTGAAACCCCAGAAAACCCTCTCCGGCGGCCGTCGTATTTTCTCTTTGCTTCCTTCTCTCAATCTCACATCTTCTTTCTTTCAGAAACCCAAACTTCTGGATTCTGGATTCTGGATTCATTCCCTTTCGCATTGCTTCAATCCGAAGTGTTATGGCTATGATGAGATCCGCCTCCGCGGTTGCTCTTCGTGGCCTCAGGAGGTTCTCTTCCCGAAGGCCAGTTTCTTCTCCAATCAATCAGGCACTGGAACTACCCACCTCCGTTTCTGGCAAGTCTCTCTTCCCATTTCTGTTACTTTCTTCGTCTTTTCATTTTGA

Coding sequence (CDS)

ATGTTGGAGAAGCTGAAACCCCAGAAAACCCTCTCCGGCGGCCGTCGTATTTTCTCTTTGCTTCCTTCTCTCAATCTCACATCTTCTTTCTTTCAGAAACCCAAACTTCTGGATTCTGGATTCTGGATTCATTCCCTTTCGCATTGCTTCAATCCGAAGTGTTATGGCTATGATGAGATCCGCCTCCGCGGTTGCTCTTCGTGGCCTCAGGAGGTTCTCTTCCCGAAGGCCAGTTTCTTCTCCAATCAATCAGGCACTGGAACTACCCACCTCCGTTTCTGGCAAGTCTCTCTTCCCATTTCTGTTACTTTCTTCGTCTTTTCATTTTGA

Protein sequence

MLEKLKPQKTLSGGRRIFSLLPSLNLTSSFFQKPKLLDSGFWIHSLSHCFNPKCYGYDEIRLRGCSSWPQEVLFPKASFFSNQSGTGTTHLRFWQVSLPISVTFFVFSF*
Homology
[Close]
BLAST of CSPI02G15570 vs. ExPASy TrEMBL
Match: A0A0A0LJS0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G302070 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 1.7e-57
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0 

Query: 1   MLEKLKPQKTLSGGRRIFSLLPSLNLTSSFFQKPKLLDSGFWIHSLSHCFNPKCYGYDEI 60
           MLEKLKPQKTLSGGRRIFSLLPSLNLTSSFFQKPKLLDSGFWIHSLSHCFNPKCYGYDEI
Sbjct: 1   MLEKLKPQKTLSGGRRIFSLLPSLNLTSSFFQKPKLLDSGFWIHSLSHCFNPKCYGYDEI 60

Query: 61  RLRGCSSWPQEVLFPKASFFSNQSGTGTTHLRFWQVSLPISVTFFVFSF 110
           RLRGCSSWPQEVLFPKASFFSNQSGTGTTHLRFWQVSLPISVTFFVFSF
Sbjct: 61  RLRGCSSWPQEVLFPKASFFSNQSGTGTTHLRFWQVSLPISVTFFVFSF 109

[Close]
BLAST of CSPI02G15570 vs. NCBI nr
Match: KAE8648010.1 (hypothetical protein Csa_021463, partial [Cucumis sativus])

HSP 1 Score: 80.5 bits (197), Expect = 1.0e-11
Identity = 37/54 (68.52%), Postives = 40/54 (74.07%), Query Frame = 0 

Query: 44 HSLSH--CFNPKCYGYDEIRLRGCSSWPQEVLFPKASFFSNQSGTGTTHLRFWQ 96
          H L+H  CFN KCY YDEI L  CSSWP+EVL  K +F SNQS TGTT LRFWQ
Sbjct: 19 HRLTHKQCFNWKCYVYDEIHLCSCSSWPKEVLSQKFNFISNQSSTGTTQLRFWQ 72

The following BLAST results are available for this feature:
BLAST of CSPI02G15570 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI02G15570 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LJS01.7e-57100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G302070 PE=4 SV=1[more]
BLAST of CSPI02G15570 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8648010.11.0e-1168.52hypothetical protein Csa_021463, partial [Cucumis sativus][more]
BLAST of CSPI02G15570 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI02G15570.1CSPI02G15570.1mRNA