CSPI02G15540 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI02G15540
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	RING-type E3 ubiquitin transferase
Location	Chr2: 15130095 .. 15131179 (-)
RNA-Seq Expression	CSPI02G15540
Synteny	CSPI02G15540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTATATTAAACCTCTTTGTCACTCTATAAATACCTCTCCTTCTCCACCCACAACCTTCACTTCTTCATCTTCTCAAACTCAAATCATTTAAAATACCAAAAACAAACCTCAAACAAAAAGAGAGAAAAAAAATGTCAATTGCTTCTATTTCTACAAACTATCTTTATGATGAACTTCATCAGGTGTTTCATTATTCAAGAAAACTCCTTCTTCACTCCTCCCTCCACAAGCTCTCCTTCACCACCACCTCCGCCGCCCCTCCCTCTGCCGTCCACGACCAATCTGAATTCTACTCCGGCGGAGACAGCACTACCTTCGACACAAATGTCGTCATGGTCCTCTCCGTCCTCCTCTGCGCCTTAATCTGCTCCTTAGCCCTCAACTCCATCATCCGATGCGCTTTGAAATGCTCCCGTCTCATCGTCTCCAATGACCACCGTCACCGCCCCACCCCCACCTCCACTGGAGTCCATAAGAAAGCCATCAAGAGCTTCACCGTGGTTCAATTCTCCCTGGACCTCAACCTCCCCGGGCTCGACCCCGAGTGCGTCATTTGCTTGTCGGAGTTCGCCACCGGCGACAAGCTCCGGCTTCTCCCGAAATGTAACCATGGGTTTCACGTTAAGTGTATTGATAAGTGGTTGAGTTCTCACTCCTCTTGCCCTAAATGTCGGCAGTGTTTGGTTCAGACTTGTGAGAAAATAGCCGGCGTTGCCTCTGCCTCCGCCTCCGCCTCCTCCTCATCTTCCGGCCACTCTCCGTCTCCTCCTCCGCCGCCGTCTGTGGTTGTAGACTTAGCACCGCTGGAACCTGAAGCTCCGGTACGGAATTTACGGCTGTAATATAATTAATAGAGATTATTATAATACTAAATTAGGGGAAATTAATTTAGAGTTTAATTTTTTTTTTGCCTTTGAGATTTAAAGTTTAATGAAATTGTATATATTTTTGTTTAATTTTCCTTCCTCATTTTCTCTTCTTCCTTTTAATTCTCTCTTTCTCCTCCTAACTTTTATATGAAACTTTCAAACTTGTGTTTAATTAGAAAATAGTTTTTAAACTTAGAAATTTATGTTTGATTAG

mRNA sequence

CTTTATATTAAACCTCTTTGTCACTCTATAAATACCTCTCCTTCTCCACCCACAACCTTCACTTCTTCATCTTCTCAAACTCAAATCATTTAAAATACCAAAAACAAACCTCAAACAAAAAGAGAGAAAAAAAATGTCAATTGCTTCTATTTCTACAAACTATCTTTATGATGAACTTCATCAGGTGTTTCATTATTCAAGAAAACTCCTTCTTCACTCCTCCCTCCACAAGCTCTCCTTCACCACCACCTCCGCCGCCCCTCCCTCTGCCGTCCACGACCAATCTGAATTCTACTCCGGCGGAGACAGCACTACCTTCGACACAAATGTCGTCATGGTCCTCTCCGTCCTCCTCTGCGCCTTAATCTGCTCCTTAGCCCTCAACTCCATCATCCGATGCGCTTTGAAATGCTCCCGTCTCATCGTCTCCAATGACCACCGTCACCGCCCCACCCCCACCTCCACTGGAGTCCATAAGAAAGCCATCAAGAGCTTCACCGTGGTTCAATTCTCCCTGGACCTCAACCTCCCCGGGCTCGACCCCGAGTGCGTCATTTGCTTGTCGGAGTTCGCCACCGGCGACAAGCTCCGGCTTCTCCCGAAATGTAACCATGGGTTTCACGTTAAGTGTATTGATAAGTGGTTGAGTTCTCACTCCTCTTGCCCTAAATGTCGGCAGTGTTTGGTTCAGACTTGTGAGAAAATAGCCGGCGTTGCCTCTGCCTCCGCCTCCGCCTCCTCCTCATCTTCCGGCCACTCTCCGTCTCCTCCTCCGCCGCCGTCTGTGGTTGTAGACTTAGCACCGCTGGAACCTGAAGCTCCGGTACGGAATTTACGGCTGTAATATAATTAATAGAGATTATTATAATACTAAATTAGGGGAAATTAATTTAGAGTTTAATTTTTTTTTTGCCTTTGAGATTTAAAGTTTAATGAAATTGTATATATTTTTGTTTAATTTTCCTTCCTCATTTTCTCTTCTTCCTTTTAATTCTCTCTTTCTCCTCCTAACTTTTATATGAAACTTTCAAACTTGTGTTTAATTAGAAAATAGTTTTTAAACTTAGAAATTTATGTTTGATTAG

Coding sequence (CDS)

ATGTCAATTGCTTCTATTTCTACAAACTATCTTTATGATGAACTTCATCAGGTGTTTCATTATTCAAGAAAACTCCTTCTTCACTCCTCCCTCCACAAGCTCTCCTTCACCACCACCTCCGCCGCCCCTCCCTCTGCCGTCCACGACCAATCTGAATTCTACTCCGGCGGAGACAGCACTACCTTCGACACAAATGTCGTCATGGTCCTCTCCGTCCTCCTCTGCGCCTTAATCTGCTCCTTAGCCCTCAACTCCATCATCCGATGCGCTTTGAAATGCTCCCGTCTCATCGTCTCCAATGACCACCGTCACCGCCCCACCCCCACCTCCACTGGAGTCCATAAGAAAGCCATCAAGAGCTTCACCGTGGTTCAATTCTCCCTGGACCTCAACCTCCCCGGGCTCGACCCCGAGTGCGTCATTTGCTTGTCGGAGTTCGCCACCGGCGACAAGCTCCGGCTTCTCCCGAAATGTAACCATGGGTTTCACGTTAAGTGTATTGATAAGTGGTTGAGTTCTCACTCCTCTTGCCCTAAATGTCGGCAGTGTTTGGTTCAGACTTGTGAGAAAATAGCCGGCGTTGCCTCTGCCTCCGCCTCCGCCTCCTCCTCATCTTCCGGCCACTCTCCGTCTCCTCCTCCGCCGCCGTCTGTGGTTGTAGACTTAGCACCGCTGGAACCTGAAGCTCCGGTACGGAATTTACGGCTGTAA

Protein sequence

MSIASISTNYLYDELHQVFHYSRKLLLHSSLHKLSFTTTSAAPPSAVHDQSEFYSGGDSTTFDTNVVMVLSVLLCALICSLALNSIIRCALKCSRLIVSNDHRHRPTPTSTGVHKKAIKSFTVVQFSLDLNLPGLDPECVICLSEFATGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTCEKIAGVASASASASSSSSGHSPSPPPPPSVVVDLAPLEPEAPVRNLRL*

Homology

[Close]

BLAST of CSPI02G15540 vs. ExPASy Swiss-Prot
Match: Q6NQG7 (RING-H2 finger protein ATL78 OS=Arabidopsis thaliana OX=3702 GN=ATL78 PE=2 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 2.6e-52
Identity = 121/237 (51.05%), Postives = 153/237 (64.56%), Query Frame = 0


Query: 1   MSIASISTNYLYDELHQVFHYSRKLLLHSSLHKLSFTTTSAAPPSAVHDQSEFYSGGDST 60
           +SI++I    ++ E+     YSRKLL H+  H  S T    AP   V D +         
Sbjct: 7   ISISTIKPTEIFQEI-LGSSYSRKLLFHT--HDQSPT---PAPSPYVGDNN--------- 66

Query: 61  TFDTNVVMVLSVLLCALICSLALNSIIRCALKCSRLIVS--NDHRHRPTPTSTGVHKKAI 120
            FD NVVMVLSVLLCAL+CSL LNSIIRCAL+CS L+ S      +    T+TGV +KA+
Sbjct: 67  -FDANVVMVLSVLLCALVCSLGLNSIIRCALRCSNLVPSEAGGDNYPVRLTNTGVKRKAL 126

Query: 121 KSFTVVQFSLDLNLPGLDPECVICLSEFATGDKLRLLPKCNHGFHVKCIDKWLSSHSSCP 180
           KSF  V +S +LNLPGLD EC ICLSEF   ++++LLP C+HGFHV+CIDKWLSSHSSCP
Sbjct: 127 KSFQTVSYSTELNLPGLDTECAICLSEFVAEERVKLLPTCHHGFHVRCIDKWLSSHSSCP 186

Query: 181 KCRQCLVQTCEKIAGVASASASASSSSSGHSPSPPPPPSVVVDLAPLEPEAPVRNLR 236
            CR CL+QTCEKIA  +  S+  S+         PP  S+++ +APLEPE  +R  R
Sbjct: 187 TCRHCLIQTCEKIADCSQTSSLNSTQ--------PPQDSIILQIAPLEPERWIRWFR 219

[Close]

BLAST of CSPI02G15540 vs. ExPASy Swiss-Prot
Match: Q6NML0 (E3 ubiquitin-protein ligase ATL76 OS=Arabidopsis thaliana OX=3702 GN=ATL76 PE=1 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 4.5e-44
Identity = 102/219 (46.58%), Postives = 135/219 (61.64%), Query Frame = 0


Query: 22  SRKLLLHSSLHKLSFTTTSAAP-PSAVHDQSEFYSGGDSTTFDTNVVMVLSVLLCALICS 81
           +RKLLLH      S    + AP P   H+ +             NV+M+LSVL+C +IC 
Sbjct: 23  TRKLLLHDPFDHNSLRVFAVAPSPLITHENN----------LKGNVLMLLSVLICGIICC 82

Query: 82  LALNSIIRCAL-KCSRLIVSNDHRHRPTPTST---GVHKKAIKSFTVVQFSLDLNLPGLD 141
           L L+ IIRCA  + SR ++S       TP S+   G+ KKA++ F VV +S ++NLPG+ 
Sbjct: 83  LGLHYIIRCAFRRSSRFMISEPISSLSTPRSSSNKGIKKKALRMFPVVSYSREMNLPGIG 142

Query: 142 PECVICLSEFATGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTCEKIAGVAS 201
            ECVICLS+F +G++LRLLPKCNHGFHV+CIDKWL  H +CPKCR CLV+TC+KI G  S
Sbjct: 143 EECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQHHLTCPKCRHCLVETCQKILGDFS 202

Query: 202 ASASASSSSSGHSPSPPPPPSVVVDLAPLEPEAPVRNLR 236
            + S +S+         P  SV+V + PLEPE  V   R
Sbjct: 203 QADSMAST---------PTESVIVRIDPLEPEGRVNTFR 222

[Close]

BLAST of CSPI02G15540 vs. ExPASy Swiss-Prot
Match: Q94BY6 (RING-H2 finger protein ATL75 OS=Arabidopsis thaliana OX=3702 GN=ATL75 PE=2 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 2.5e-42
Identity = 98/219 (44.75%), Postives = 135/219 (61.64%), Query Frame = 0


Query: 22  SRKLLLHSSL-HKLSFTTTSAAPPSAVHDQSEFYSGGDSTTFDTNVVMVLSVLLCALICS 81
           SRKLLLH+   H        A  P   H+ +             NV+M+LSVL+C +IC 
Sbjct: 24  SRKLLLHNPFDHNTQRAFAVAPSPLITHENN----------LSGNVLMLLSVLICGIICC 83

Query: 82  LALNSIIRCAL-KCSRLIVSNDHRHRPTP---TSTGVHKKAIKSFTVVQFSLDLNLPGLD 141
           L L+ IIRCA  + S  ++S       TP   ++ G++KKA++ F VV +S ++NLPGL 
Sbjct: 84  LGLHYIIRCAFRRTSSFMISEPIAGLSTPCGSSNKGINKKALRMFPVVSYSPEMNLPGLG 143

Query: 142 PECVICLSEFATGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTCEKIAGVAS 201
            ECVICLS+F +G+++R+LPKC+HGFHV+CIDKWL  H +CPKCR CLV+TC+KI G  S
Sbjct: 144 EECVICLSDFVSGEQIRMLPKCHHGFHVRCIDKWLQQHLTCPKCRHCLVETCQKILGDFS 203

Query: 202 ASASASSSSSGHSPSPPPPPSVVVDLAPLEPEAPVRNLR 236
            +   +++         P  SV+V +APLEPE  V  LR
Sbjct: 204 QADQVAAT---------PTASVIVRIAPLEPEGRVNILR 223

[Close]

BLAST of CSPI02G15540 vs. ExPASy Swiss-Prot
Match: P0C034 (RING-H2 finger protein ATL10 OS=Arabidopsis thaliana OX=3702 GN=ATL10 PE=2 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 1.0e-40
Identity = 104/241 (43.15%), Postives = 139/241 (57.68%), Query Frame = 0


Query: 22  SRKLLLHSSL-HKLSFTTTSAAPPSAVHDQSEFYSGGDSTTFDTNVVMVLSVLLCALICS 81
           SRKLLLH+   H        A  P   H+ +             NV+M+LS+L+C +IC 
Sbjct: 23  SRKLLLHNPFDHNTQRAFAVAPSPLITHENN----------LSGNVMMLLSILICGIICC 82

Query: 82  LALNSIIRCALKCS-RLIVSNDHRHRPTP--------TSTGVHKKAIKSFTVVQFSLDLN 141
           L L+ IIRCAL+ S R ++S      P P        ++ G+ KKA++ F VV +S ++N
Sbjct: 83  LGLHYIIRCALRRSTRFMIS-----EPVPSLSSTRGSSNKGIKKKALRMFPVVSYSPEMN 142

Query: 142 LPGLDPECVICLSEFATGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTCEKI 201
           LPGLD ECVICLS+F +G++LRLLPKCNHGFHV+CIDKWL  H +CPKCR CLV+TC+KI
Sbjct: 143 LPGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPKCRNCLVETCQKI 202

Query: 202 AGVASASASASSSSS-----GHSPSPP------------PPPSVVVDLAPLEPEAPVRNL 236
            G  S + S ++  +        P  P            P   V+V +APLEPE  V  +
Sbjct: 203 LGDFSQADSVTAEPTEIVIVTIVPLEPTEIVIVTIAPLEPTEIVIVMIAPLEPEGRVNTI 248

[Close]

BLAST of CSPI02G15540 vs. ExPASy Swiss-Prot
Match: Q9LS99 (RING-H2 finger protein ATL77 OS=Arabidopsis thaliana OX=3702 GN=ATL77 PE=2 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 6.7e-40
Identity = 83/183 (45.36%), Postives = 118/183 (64.48%), Query Frame = 0


Query: 58  DSTTFDTNVVMVLSVLLCALICSLALNSIIRCALKCSRLIVSND-----HRHRPTPTSTG 117
           D      NV+M+LS+LLC +ICSL L+ IIRCA   SR  + +D        R +  + G
Sbjct: 44  DKNNLSGNVLMLLSILLCGIICSLGLHYIIRCAFIRSRSFMISDPISIPSTPRDSSVNKG 103

Query: 118 VHKKAIKSFTVVQFSLDLNLPGLDPECVICLSEFATGDKLRLLPKCNHGFHVKCIDKWLS 177
           + KKA+K   VV +S ++NLPG+  ECVICLS+F  G++LR+LPKCNHGFH++CIDKWL+
Sbjct: 104 IKKKALKMLPVVNYSPEINLPGVGEECVICLSDFVAGEQLRVLPKCNHGFHLRCIDKWLT 163

Query: 178 SHSSCPKCRQCLVQTCEKIAGVASASASASSSSSGHSPSPPPPPSVVVDLAPLEPEAPVR 236
            H +CPKCR CLV TC+K+     A+   +++++          S+ + ++PLEPEA V 
Sbjct: 164 QHMTCPKCRHCLVDTCQKVLSDCDAADQVAATAT---------ESIDIRISPLEPEARVA 217

[Close]

BLAST of CSPI02G15540 vs. ExPASy TrEMBL
Match: A0A0A0LQ73 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_2G301540 PE=3 SV=1)

HSP 1 Score: 462.2 bits (1188), Expect = 1.3e-126
Identity = 235/236 (99.58%), Postives = 235/236 (99.58%), Query Frame = 0


Query: 1   MSIASISTNYLYDELHQVFHYSRKLLLHSSLHKLSFTTTSAAPPSAVHDQSEFYSGGDST 60
           MSIASISTNYLYDELHQVFHYSRKLLLHSSLHKLSFTTTSAAPPSAVHDQSEFYSGGDST
Sbjct: 1   MSIASISTNYLYDELHQVFHYSRKLLLHSSLHKLSFTTTSAAPPSAVHDQSEFYSGGDST 60

Query: 61  TFDTNVVMVLSVLLCALICSLALNSIIRCALKCSRLIVSNDHRHRPTPTSTGVHKKAIKS 120
           TFDTNVVMVLSVLLCALICSLALNSIIRCALKCSRLIVSNDHRHR TPTSTGVHKKAIKS
Sbjct: 61  TFDTNVVMVLSVLLCALICSLALNSIIRCALKCSRLIVSNDHRHRLTPTSTGVHKKAIKS 120

Query: 121 FTVVQFSLDLNLPGLDPECVICLSEFATGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKC 180
           FTVVQFSLDLNLPGLDPECVICLSEFATGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKC
Sbjct: 121 FTVVQFSLDLNLPGLDPECVICLSEFATGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKC 180

Query: 181 RQCLVQTCEKIAGVASASASASSSSSGHSPSPPPPPSVVVDLAPLEPEAPVRNLRL 237
           RQCLVQTCEKIAGVASASASASSSSSGHSPSPPPPPSVVVDLAPLEPEAPVRNLRL
Sbjct: 181 RQCLVQTCEKIAGVASASASASSSSSGHSPSPPPPPSVVVDLAPLEPEAPVRNLRL 236

[Close]

BLAST of CSPI02G15540 vs. ExPASy TrEMBL
Match: A0A5A7TCX2 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold680G00810 PE=3 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 1.8e-104
Identity = 206/237 (86.92%), Postives = 212/237 (89.45%), Query Frame = 0


Query: 1   MSIASISTNYLYDELHQVFHYSRKLLLHSSLHKLSFTTTSAAPPSAVHDQSEFYSGGDST 60
           MSIA+ISTN      H+VF YSRKLLLHSSLHKLSFT   AA PSAVHDQSEFYSGGDST
Sbjct: 1   MSIATISTNI----HHEVFRYSRKLLLHSSLHKLSFT---AAAPSAVHDQSEFYSGGDST 60

Query: 61  TFDTNVVMVLSVLLCALICSLALNSIIRCALKCSRLIVSNDHRHRPTPTSTGVHKKAIKS 120
           TFDTNVVMVLSVLLCALICSLALNS+IRCALKCSR +VSNDHR  P PTSTGVHKKAIKS
Sbjct: 61  TFDTNVVMVLSVLLCALICSLALNSVIRCALKCSRFLVSNDHRRHPAPTSTGVHKKAIKS 120

Query: 121 FTVVQFSLDLNLPGLDPECVICLSEFATGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKC 180
           FTVVQFS DLNLPGLD ECVICLSEF TGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKC
Sbjct: 121 FTVVQFSPDLNLPGLDSECVICLSEFVTGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKC 180

Query: 181 RQCLVQTCEKIAGV-ASASASASSSSSGHSPSPPPPPSVVVDLAPLEPEAPVRNLRL 237
           RQCLVQTCEKIAGV ASASAS+SS  S   P PPPPPSVVV+LAPLEPEAPVRNLRL
Sbjct: 181 RQCLVQTCEKIAGVIASASASSSSGHSPSPPPPPPPPSVVVNLAPLEPEAPVRNLRL 230

[Close]

BLAST of CSPI02G15540 vs. ExPASy TrEMBL
Match: A0A1S3CDJ3 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103499651 PE=3 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 1.8e-104
Identity = 206/237 (86.92%), Postives = 212/237 (89.45%), Query Frame = 0


Query: 1   MSIASISTNYLYDELHQVFHYSRKLLLHSSLHKLSFTTTSAAPPSAVHDQSEFYSGGDST 60
           MSIA+ISTN      H+VF YSRKLLLHSSLHKLSFT   AA PSAVHDQSEFYSGGDST
Sbjct: 1   MSIATISTNI----HHEVFRYSRKLLLHSSLHKLSFT---AAAPSAVHDQSEFYSGGDST 60

Query: 61  TFDTNVVMVLSVLLCALICSLALNSIIRCALKCSRLIVSNDHRHRPTPTSTGVHKKAIKS 120
           TFDTNVVMVLSVLLCALICSLALNS+IRCALKCSR +VSNDHR  P PTSTGVHKKAIKS
Sbjct: 61  TFDTNVVMVLSVLLCALICSLALNSVIRCALKCSRFLVSNDHRRHPAPTSTGVHKKAIKS 120

Query: 121 FTVVQFSLDLNLPGLDPECVICLSEFATGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKC 180
           FTVVQFS DLNLPGLD ECVICLSEF TGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKC
Sbjct: 121 FTVVQFSPDLNLPGLDSECVICLSEFVTGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKC 180

Query: 181 RQCLVQTCEKIAGV-ASASASASSSSSGHSPSPPPPPSVVVDLAPLEPEAPVRNLRL 237
           RQCLVQTCEKIAGV ASASAS+SS  S   P PPPPPSVVV+LAPLEPEAPVRNLRL
Sbjct: 181 RQCLVQTCEKIAGVIASASASSSSGHSPSPPPPPPPPSVVVNLAPLEPEAPVRNLRL 230

[Close]

BLAST of CSPI02G15540 vs. ExPASy TrEMBL
Match: A0A6J1L4E9 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111499787 PE=3 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 1.4e-72
Identity = 151/224 (67.41%), Postives = 174/224 (77.68%), Query Frame = 0


Query: 16  HQVFHYSRKLLLHSSLHKLSFTTTSAAPPSAVHDQSEFYS-GGDSTTFDTNVVMVLSVLL 75
           HQ FHYSRKL              +AA PSA+H+  +  S GG  T+FDTNVVMVLSVLL
Sbjct: 11  HQEFHYSRKLF-------------TAAAPSALHNPLQSISGGGPDTSFDTNVVMVLSVLL 70

Query: 76  CALICSLALNSIIRCALKCSRLIVSNDHR--HRPTPTSTGVHKKAIKSFTVVQFSLDLNL 135
           CALICSL LNSIIRCA KCSR++VS+DHR     T   TGVHKKAIKSFTVVQFS +LN 
Sbjct: 71  CALICSLGLNSIIRCAFKCSRIVVSHDHRPPSATTAVPTGVHKKAIKSFTVVQFSPELNF 130

Query: 136 PGLDPECVICLSEFATGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTCEKIA 195
           PG+D EC+ICLS+FA GDKLRLLPKCNHGFHV+CIDKWL+SHSSCPKCRQCLVQTC+KIA
Sbjct: 131 PGMDSECIICLSDFAAGDKLRLLPKCNHGFHVRCIDKWLTSHSSCPKCRQCLVQTCQKIA 190

Query: 196 GVASASASASSSSSGHSPSPPPPPSVVVDLAPLEPEAPVRNLRL 237
           GV +   S S+S+SG  PS PPPP  V++L P++ E PVRNLR+
Sbjct: 191 GVGT---STSTSTSGQPPSQPPPP--VLNLTPVDHEGPVRNLRV 216

[Close]

BLAST of CSPI02G15540 vs. ExPASy TrEMBL
Match: A0A6J1EJK6 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111434900 PE=3 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 5.3e-72
Identity = 160/238 (67.23%), Postives = 177/238 (74.37%), Query Frame = 0


Query: 1   MSIASIST-NYLYDELHQVFHYSRKLLLHSSLHKLSFTTTSAAPPSAVHDQSEFYSGGDS 60
           MS  SIS+ + L     QVF+YSRKLLLHSSLH L+F  T+ AP S +H   E Y     
Sbjct: 1   MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTF--TADAPSSVLHRPLESY----- 60

Query: 61  TTFDTNVVMVLSVLLCALICSLALNSIIRCALKCSRLIVSND-HRHRPTPTSTGVHKKAI 120
            TFDTNVVMVLSVLLCALICSL LNSIIRCALKCSR +VS+D H    T    GVHKKAI
Sbjct: 61  -TFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDDTHPSSTTAAPVGVHKKAI 120

Query: 121 KSFTVVQFSLDLNLPGLDPECVICLSEFATGDKLRLLPKCNHGFHVKCIDKWLSSHSSCP 180
           KSFT+VQFS DLNLPGLD ECVICLS+F  G+KLRLLPKCNHGFHVKCIDKWLSSHSSCP
Sbjct: 121 KSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCP 180

Query: 181 KCRQCLVQTCEKIAGVASASASASSSSSGHSPSPPPPPSVVVDLAPLEPEAPVRNLRL 237
           KCRQCLVQT +KIAGV               P+ PPPP+  ++LAPL+PEA VRNL L
Sbjct: 181 KCRQCLVQTSQKIAGVG-------------GPTSPPPPA--INLAPLDPEARVRNLWL 215

[Close]

BLAST of CSPI02G15540 vs. NCBI nr
Match: XP_004147380.1 (RING-H2 finger protein ATL78 [Cucumis sativus] >KGN62136.1 hypothetical protein Csa_006555 [Cucumis sativus])

HSP 1 Score: 462.2 bits (1188), Expect = 2.6e-126
Identity = 235/236 (99.58%), Postives = 235/236 (99.58%), Query Frame = 0


Query: 1   MSIASISTNYLYDELHQVFHYSRKLLLHSSLHKLSFTTTSAAPPSAVHDQSEFYSGGDST 60
           MSIASISTNYLYDELHQVFHYSRKLLLHSSLHKLSFTTTSAAPPSAVHDQSEFYSGGDST
Sbjct: 1   MSIASISTNYLYDELHQVFHYSRKLLLHSSLHKLSFTTTSAAPPSAVHDQSEFYSGGDST 60

Query: 61  TFDTNVVMVLSVLLCALICSLALNSIIRCALKCSRLIVSNDHRHRPTPTSTGVHKKAIKS 120
           TFDTNVVMVLSVLLCALICSLALNSIIRCALKCSRLIVSNDHRHR TPTSTGVHKKAIKS
Sbjct: 61  TFDTNVVMVLSVLLCALICSLALNSIIRCALKCSRLIVSNDHRHRLTPTSTGVHKKAIKS 120

Query: 121 FTVVQFSLDLNLPGLDPECVICLSEFATGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKC 180
           FTVVQFSLDLNLPGLDPECVICLSEFATGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKC
Sbjct: 121 FTVVQFSLDLNLPGLDPECVICLSEFATGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKC 180

Query: 181 RQCLVQTCEKIAGVASASASASSSSSGHSPSPPPPPSVVVDLAPLEPEAPVRNLRL 237
           RQCLVQTCEKIAGVASASASASSSSSGHSPSPPPPPSVVVDLAPLEPEAPVRNLRL
Sbjct: 181 RQCLVQTCEKIAGVASASASASSSSSGHSPSPPPPPSVVVDLAPLEPEAPVRNLRL 236

[Close]

BLAST of CSPI02G15540 vs. NCBI nr
Match: XP_008460910.1 (PREDICTED: RING-H2 finger protein ATL78-like [Cucumis melo] >KAA0040778.1 RING-H2 finger protein ATL78-like [Cucumis melo var. makuwa] >TYK02094.1 RING-H2 finger protein ATL78-like [Cucumis melo var. makuwa])

HSP 1 Score: 388.7 bits (997), Expect = 3.7e-104
Identity = 206/237 (86.92%), Postives = 212/237 (89.45%), Query Frame = 0


Query: 1   MSIASISTNYLYDELHQVFHYSRKLLLHSSLHKLSFTTTSAAPPSAVHDQSEFYSGGDST 60
           MSIA+ISTN      H+VF YSRKLLLHSSLHKLSFT   AA PSAVHDQSEFYSGGDST
Sbjct: 1   MSIATISTNI----HHEVFRYSRKLLLHSSLHKLSFT---AAAPSAVHDQSEFYSGGDST 60

Query: 61  TFDTNVVMVLSVLLCALICSLALNSIIRCALKCSRLIVSNDHRHRPTPTSTGVHKKAIKS 120
           TFDTNVVMVLSVLLCALICSLALNS+IRCALKCSR +VSNDHR  P PTSTGVHKKAIKS
Sbjct: 61  TFDTNVVMVLSVLLCALICSLALNSVIRCALKCSRFLVSNDHRRHPAPTSTGVHKKAIKS 120

Query: 121 FTVVQFSLDLNLPGLDPECVICLSEFATGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKC 180
           FTVVQFS DLNLPGLD ECVICLSEF TGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKC
Sbjct: 121 FTVVQFSPDLNLPGLDSECVICLSEFVTGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKC 180

Query: 181 RQCLVQTCEKIAGV-ASASASASSSSSGHSPSPPPPPSVVVDLAPLEPEAPVRNLRL 237
           RQCLVQTCEKIAGV ASASAS+SS  S   P PPPPPSVVV+LAPLEPEAPVRNLRL
Sbjct: 181 RQCLVQTCEKIAGVIASASASSSSGHSPSPPPPPPPPSVVVNLAPLEPEAPVRNLRL 230

[Close]

BLAST of CSPI02G15540 vs. NCBI nr
Match: XP_038901957.1 (RING-H2 finger protein ATL78-like [Benincasa hispida])

HSP 1 Score: 324.7 bits (831), Expect = 6.6e-85
Identity = 178/240 (74.17%), Postives = 193/240 (80.42%), Query Frame = 0


Query: 1   MSIASISTNYLYDELHQVFHYSRKLLLHSSLHKLSFTTTSAAPPSAVHDQSEFYSGGDS- 60
           MS ASIST++ Y+E    FHYSRKLLLH SLHKLSFT   AA PS +HDQSEFYSG  S 
Sbjct: 1   MSAASISTSH-YEE----FHYSRKLLLHPSLHKLSFT---AAAPSTLHDQSEFYSGSSSG 60

Query: 61  -TTFDTNVVMVLSVLLCALICSLALNSIIRCALKCSRLIVSNDHRHRPT--PTSTGVHKK 120
            TTFDTNVVMVLSVLLCALICSL LNSIIRCALKCSR ++S+D R   +  P STGVHKK
Sbjct: 61  DTTFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVISDDGRRSSSTAPASTGVHKK 120

Query: 121 AIKSFTVVQFSLDLNLPGLDPECVICLSEFATGDKLRLLPKCNHGFHVKCIDKWLSSHSS 180
           AIKSFTVVQFS +LNLPGLD ECVICLS+FA G+KLRLLPKCNHGFHVKCIDKWLSSHSS
Sbjct: 121 AIKSFTVVQFSPNLNLPGLDSECVICLSDFAAGEKLRLLPKCNHGFHVKCIDKWLSSHSS 180

Query: 181 CPKCRQCLVQTCEKIAGVASASASASSSSSGHSPSPPPPPSVVVDLAPLEPEAPVRNLRL 237
           CPKCRQCLV TC+KIAGVA+AS S             PPP  VV +APL+ EAPVRNLRL
Sbjct: 181 CPKCRQCLVHTCQKIAGVATASGS-------------PPPPAVVGIAPLDHEAPVRNLRL 219

[Close]

BLAST of CSPI02G15540 vs. NCBI nr
Match: XP_023007244.1 (RING-H2 finger protein ATL78-like [Cucurbita maxima])

HSP 1 Score: 282.7 bits (722), Expect = 2.9e-72
Identity = 151/224 (67.41%), Postives = 174/224 (77.68%), Query Frame = 0


Query: 16  HQVFHYSRKLLLHSSLHKLSFTTTSAAPPSAVHDQSEFYS-GGDSTTFDTNVVMVLSVLL 75
           HQ FHYSRKL              +AA PSA+H+  +  S GG  T+FDTNVVMVLSVLL
Sbjct: 11  HQEFHYSRKLF-------------TAAAPSALHNPLQSISGGGPDTSFDTNVVMVLSVLL 70

Query: 76  CALICSLALNSIIRCALKCSRLIVSNDHR--HRPTPTSTGVHKKAIKSFTVVQFSLDLNL 135
           CALICSL LNSIIRCA KCSR++VS+DHR     T   TGVHKKAIKSFTVVQFS +LN 
Sbjct: 71  CALICSLGLNSIIRCAFKCSRIVVSHDHRPPSATTAVPTGVHKKAIKSFTVVQFSPELNF 130

Query: 136 PGLDPECVICLSEFATGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTCEKIA 195
           PG+D EC+ICLS+FA GDKLRLLPKCNHGFHV+CIDKWL+SHSSCPKCRQCLVQTC+KIA
Sbjct: 131 PGMDSECIICLSDFAAGDKLRLLPKCNHGFHVRCIDKWLTSHSSCPKCRQCLVQTCQKIA 190

Query: 196 GVASASASASSSSSGHSPSPPPPPSVVVDLAPLEPEAPVRNLRL 237
           GV +   S S+S+SG  PS PPPP  V++L P++ E PVRNLR+
Sbjct: 191 GVGT---STSTSTSGQPPSQPPPP--VLNLTPVDHEGPVRNLRV 216

[Close]

BLAST of CSPI02G15540 vs. NCBI nr
Match: XP_022927999.1 (RING-H2 finger protein ATL78-like [Cucurbita moschata])

HSP 1 Score: 280.8 bits (717), Expect = 1.1e-71
Identity = 160/238 (67.23%), Postives = 177/238 (74.37%), Query Frame = 0


Query: 1   MSIASIST-NYLYDELHQVFHYSRKLLLHSSLHKLSFTTTSAAPPSAVHDQSEFYSGGDS 60
           MS  SIS+ + L     QVF+YSRKLLLHSSLH L+F  T+ AP S +H   E Y     
Sbjct: 1   MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTF--TADAPSSVLHRPLESY----- 60

Query: 61  TTFDTNVVMVLSVLLCALICSLALNSIIRCALKCSRLIVSND-HRHRPTPTSTGVHKKAI 120
            TFDTNVVMVLSVLLCALICSL LNSIIRCALKCSR +VS+D H    T    GVHKKAI
Sbjct: 61  -TFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDDTHPSSTTAAPVGVHKKAI 120

Query: 121 KSFTVVQFSLDLNLPGLDPECVICLSEFATGDKLRLLPKCNHGFHVKCIDKWLSSHSSCP 180
           KSFT+VQFS DLNLPGLD ECVICLS+F  G+KLRLLPKCNHGFHVKCIDKWLSSHSSCP
Sbjct: 121 KSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCP 180

Query: 181 KCRQCLVQTCEKIAGVASASASASSSSSGHSPSPPPPPSVVVDLAPLEPEAPVRNLRL 237
           KCRQCLVQT +KIAGV               P+ PPPP+  ++LAPL+PEA VRNL L
Sbjct: 181 KCRQCLVQTSQKIAGVG-------------GPTSPPPPA--INLAPLDPEARVRNLWL 215

[Close]

BLAST of CSPI02G15540 vs. TAIR 10
Match: AT1G49230.1 (RING/U-box superfamily protein )

HSP 1 Score: 206.8 bits (525), Expect = 1.9e-53
Identity = 121/237 (51.05%), Postives = 153/237 (64.56%), Query Frame = 0


Query: 1   MSIASISTNYLYDELHQVFHYSRKLLLHSSLHKLSFTTTSAAPPSAVHDQSEFYSGGDST 60
           +SI++I    ++ E+     YSRKLL H+  H  S T    AP   V D +         
Sbjct: 7   ISISTIKPTEIFQEI-LGSSYSRKLLFHT--HDQSPT---PAPSPYVGDNN--------- 66

Query: 61  TFDTNVVMVLSVLLCALICSLALNSIIRCALKCSRLIVS--NDHRHRPTPTSTGVHKKAI 120
            FD NVVMVLSVLLCAL+CSL LNSIIRCAL+CS L+ S      +    T+TGV +KA+
Sbjct: 67  -FDANVVMVLSVLLCALVCSLGLNSIIRCALRCSNLVPSEAGGDNYPVRLTNTGVKRKAL 126

Query: 121 KSFTVVQFSLDLNLPGLDPECVICLSEFATGDKLRLLPKCNHGFHVKCIDKWLSSHSSCP 180
           KSF  V +S +LNLPGLD EC ICLSEF   ++++LLP C+HGFHV+CIDKWLSSHSSCP
Sbjct: 127 KSFQTVSYSTELNLPGLDTECAICLSEFVAEERVKLLPTCHHGFHVRCIDKWLSSHSSCP 186

Query: 181 KCRQCLVQTCEKIAGVASASASASSSSSGHSPSPPPPPSVVVDLAPLEPEAPVRNLR 236
            CR CL+QTCEKIA  +  S+  S+         PP  S+++ +APLEPE  +R  R
Sbjct: 187 TCRHCLIQTCEKIADCSQTSSLNSTQ--------PPQDSIILQIAPLEPERWIRWFR 219

[Close]

BLAST of CSPI02G15540 vs. TAIR 10
Match: AT1G49210.1 (RING/U-box superfamily protein )

HSP 1 Score: 179.5 bits (454), Expect = 3.2e-45
Identity = 102/219 (46.58%), Postives = 135/219 (61.64%), Query Frame = 0


Query: 22  SRKLLLHSSLHKLSFTTTSAAP-PSAVHDQSEFYSGGDSTTFDTNVVMVLSVLLCALICS 81
           +RKLLLH      S    + AP P   H+ +             NV+M+LSVL+C +IC 
Sbjct: 23  TRKLLLHDPFDHNSLRVFAVAPSPLITHENN----------LKGNVLMLLSVLICGIICC 82

Query: 82  LALNSIIRCAL-KCSRLIVSNDHRHRPTPTST---GVHKKAIKSFTVVQFSLDLNLPGLD 141
           L L+ IIRCA  + SR ++S       TP S+   G+ KKA++ F VV +S ++NLPG+ 
Sbjct: 83  LGLHYIIRCAFRRSSRFMISEPISSLSTPRSSSNKGIKKKALRMFPVVSYSREMNLPGIG 142

Query: 142 PECVICLSEFATGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTCEKIAGVAS 201
            ECVICLS+F +G++LRLLPKCNHGFHV+CIDKWL  H +CPKCR CLV+TC+KI G  S
Sbjct: 143 EECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQHHLTCPKCRHCLVETCQKILGDFS 202

Query: 202 ASASASSSSSGHSPSPPPPPSVVVDLAPLEPEAPVRNLR 236
            + S +S+         P  SV+V + PLEPE  V   R
Sbjct: 203 QADSMAST---------PTESVIVRIDPLEPEGRVNTFR 222

[Close]

BLAST of CSPI02G15540 vs. TAIR 10
Match: AT1G49200.1 (RING/U-box superfamily protein )

HSP 1 Score: 173.7 bits (439), Expect = 1.8e-43
Identity = 98/219 (44.75%), Postives = 135/219 (61.64%), Query Frame = 0


Query: 22  SRKLLLHSSL-HKLSFTTTSAAPPSAVHDQSEFYSGGDSTTFDTNVVMVLSVLLCALICS 81
           SRKLLLH+   H        A  P   H+ +             NV+M+LSVL+C +IC 
Sbjct: 24  SRKLLLHNPFDHNTQRAFAVAPSPLITHENN----------LSGNVLMLLSVLICGIICC 83

Query: 82  LALNSIIRCAL-KCSRLIVSNDHRHRPTP---TSTGVHKKAIKSFTVVQFSLDLNLPGLD 141
           L L+ IIRCA  + S  ++S       TP   ++ G++KKA++ F VV +S ++NLPGL 
Sbjct: 84  LGLHYIIRCAFRRTSSFMISEPIAGLSTPCGSSNKGINKKALRMFPVVSYSPEMNLPGLG 143

Query: 142 PECVICLSEFATGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTCEKIAGVAS 201
            ECVICLS+F +G+++R+LPKC+HGFHV+CIDKWL  H +CPKCR CLV+TC+KI G  S
Sbjct: 144 EECVICLSDFVSGEQIRMLPKCHHGFHVRCIDKWLQQHLTCPKCRHCLVETCQKILGDFS 203

Query: 202 ASASASSSSSGHSPSPPPPPSVVVDLAPLEPEAPVRNLR 236
            +   +++         P  SV+V +APLEPE  V  LR
Sbjct: 204 QADQVAAT---------PTASVIVRIAPLEPEGRVNILR 223

[Close]

BLAST of CSPI02G15540 vs. TAIR 10
Match: AT1G49220.1 (RING/U-box superfamily protein )

HSP 1 Score: 168.3 bits (425), Expect = 7.4e-42
Identity = 104/241 (43.15%), Postives = 139/241 (57.68%), Query Frame = 0


Query: 22  SRKLLLHSSL-HKLSFTTTSAAPPSAVHDQSEFYSGGDSTTFDTNVVMVLSVLLCALICS 81
           SRKLLLH+   H        A  P   H+ +             NV+M+LS+L+C +IC 
Sbjct: 23  SRKLLLHNPFDHNTQRAFAVAPSPLITHENN----------LSGNVMMLLSILICGIICC 82

Query: 82  LALNSIIRCALKCS-RLIVSNDHRHRPTP--------TSTGVHKKAIKSFTVVQFSLDLN 141
           L L+ IIRCAL+ S R ++S      P P        ++ G+ KKA++ F VV +S ++N
Sbjct: 83  LGLHYIIRCALRRSTRFMIS-----EPVPSLSSTRGSSNKGIKKKALRMFPVVSYSPEMN 142

Query: 142 LPGLDPECVICLSEFATGDKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTCEKI 201
           LPGLD ECVICLS+F +G++LRLLPKCNHGFHV+CIDKWL  H +CPKCR CLV+TC+KI
Sbjct: 143 LPGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPKCRNCLVETCQKI 202

Query: 202 AGVASASASASSSSS-----GHSPSPP------------PPPSVVVDLAPLEPEAPVRNL 236
            G  S + S ++  +        P  P            P   V+V +APLEPE  V  +
Sbjct: 203 LGDFSQADSVTAEPTEIVIVTIVPLEPTEIVIVTIAPLEPTEIVIVMIAPLEPEGRVNTI 248

[Close]

BLAST of CSPI02G15540 vs. TAIR 10
Match: AT3G18773.1 (RING/U-box superfamily protein )

HSP 1 Score: 165.6 bits (418), Expect = 4.8e-41
Identity = 83/183 (45.36%), Postives = 118/183 (64.48%), Query Frame = 0


Query: 58  DSTTFDTNVVMVLSVLLCALICSLALNSIIRCALKCSRLIVSND-----HRHRPTPTSTG 117
           D      NV+M+LS+LLC +ICSL L+ IIRCA   SR  + +D        R +  + G
Sbjct: 44  DKNNLSGNVLMLLSILLCGIICSLGLHYIIRCAFIRSRSFMISDPISIPSTPRDSSVNKG 103

Query: 118 VHKKAIKSFTVVQFSLDLNLPGLDPECVICLSEFATGDKLRLLPKCNHGFHVKCIDKWLS 177
           + KKA+K   VV +S ++NLPG+  ECVICLS+F  G++LR+LPKCNHGFH++CIDKWL+
Sbjct: 104 IKKKALKMLPVVNYSPEINLPGVGEECVICLSDFVAGEQLRVLPKCNHGFHLRCIDKWLT 163

Query: 178 SHSSCPKCRQCLVQTCEKIAGVASASASASSSSSGHSPSPPPPPSVVVDLAPLEPEAPVR 236
            H +CPKCR CLV TC+K+     A+   +++++          S+ + ++PLEPEA V 
Sbjct: 164 QHMTCPKCRHCLVDTCQKVLSDCDAADQVAATAT---------ESIDIRISPLEPEARVA 217

The following BLAST results are available for this feature:

BLAST of CSPI02G15540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NQG7	2.6e-52	51.05	RING-H2 finger protein ATL78 OS=Arabidopsis thaliana OX=3702 GN=ATL78 PE=2 SV=1	[more]
Q6NML0	4.5e-44	46.58	E3 ubiquitin-protein ligase ATL76 OS=Arabidopsis thaliana OX=3702 GN=ATL76 PE=1 ...	[more]
Q94BY6	2.5e-42	44.75	RING-H2 finger protein ATL75 OS=Arabidopsis thaliana OX=3702 GN=ATL75 PE=2 SV=1	[more]
P0C034	1.0e-40	43.15	RING-H2 finger protein ATL10 OS=Arabidopsis thaliana OX=3702 GN=ATL10 PE=2 SV=1	[more]
Q9LS99	6.7e-40	45.36	RING-H2 finger protein ATL77 OS=Arabidopsis thaliana OX=3702 GN=ATL77 PE=2 SV=1	[more]

BLAST of CSPI02G15540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQ73	1.3e-126	99.58	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_2G301540 PE...	[more]
A0A5A7TCX2	1.8e-104	86.92	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3CDJ3	1.8e-104	86.92	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103499651 PE=3 ...	[more]
A0A6J1L4E9	1.4e-72	67.41	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111499787 P...	[more]
A0A6J1EJK6	5.3e-72	67.23	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111434900...	[more]

BLAST of CSPI02G15540 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147380.1	2.6e-126	99.58	RING-H2 finger protein ATL78 [Cucumis sativus] >KGN62136.1 hypothetical protein ...	[more]
XP_008460910.1	3.7e-104	86.92	PREDICTED: RING-H2 finger protein ATL78-like [Cucumis melo] >KAA0040778.1 RING-H...	[more]
XP_038901957.1	6.6e-85	74.17	RING-H2 finger protein ATL78-like [Benincasa hispida]	[more]
XP_023007244.1	2.9e-72	67.41	RING-H2 finger protein ATL78-like [Cucurbita maxima]	[more]
XP_022927999.1	1.1e-71	67.23	RING-H2 finger protein ATL78-like [Cucurbita moschata]	[more]

BLAST of CSPI02G15540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G49230.1	1.9e-53	51.05	RING/U-box superfamily protein	[more]
AT1G49210.1	3.2e-45	46.58	RING/U-box superfamily protein	[more]
AT1G49200.1	1.8e-43	44.75	RING/U-box superfamily protein	[more]
AT1G49220.1	7.4e-42	43.15	RING/U-box superfamily protein	[more]
AT3G18773.1	4.8e-41	45.36	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 139..180 e-value: 2.5E-7 score: 40.4
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 138..181 e-value: 3.7E-14 score: 52.8
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 139..181 score: 12.341748
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 98..186 e-value: 3.3E-21 score: 76.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 199..223
None	No IPR available	PANTHER	PTHR46905:SF7	RING-H2 FINGER PROTEIN ATL78	coord: 4..235
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 138..181 e-value: 2.54542E-15 score: 65.7861
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 125..186
IPR044602	RING-H2 finger protein ATL10/ATL75-79	PANTHER	PTHR46905	RING-H2 FINGER PROTEIN ATL78	coord: 4..235

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G15540.1	CSPI02G15540.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016740	transferase activity