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CSPI02G15180 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCACATGTCATTGCCTTTGTCAATCAATACAAACACAGACCAAATAAATGGGAAAAAAAGTAGAACACAAAAAGCAAAGGCAAAAGATATCACAACGAAGATTCAAGAACACCCACCTGAAATTTTTTTGAACTTTTTTCCACTCATCACCATCTTCAATTCCCTTTCTTCCCCGCAAACCCCTTTTCTTTCCCCCTCTTTTCTCAACAAATCCCCCCAAATTTTGCTATCTTTTCAGCTCTCTTTATGATTTACGTTTCCATTTTCTGTATCAATGGATGTTTCTGCTACCAAAAGAAGGCTCCTCAAAGTCATCTTCCTCGGTGACAGTGGGTGAGCTTCATTTCTTCTGTTTCACCTTTTATCATCATTTTTCTTTTCCAATTTGCTTTATCTCTTTGAATATACATTGCTGATTTTTTGTTGAAAATTTTCAGAGTTGGAAAGACTTCTTTGATGAATCGGTATCCTTTTTCAATAGTTGATAGATTTTTAATTACATTTTGTTTATGTTAGTGCTTATTTAAATAAACACTTCCAAGTGTTTGATGAAATGCCTGAGGAAAGTTTGTTGGTTTTTTGTGGTGTGGACTGTTAACTACTGATTTAGATATGTGTATAAGAAGTTTAATCTACAGTATAAAGCAACAATTGGTGCTGACTTTATGACAAAGGAGCTACGGATTGATGACCAACTTGTCACATTGCAAGTGGGTAAAAGTAACCCATAATTTGTTGTTGTTATTATTATTTGCGTTTTAACATCATGATATAGTTTATCAAAATTTTCTGATATTTTAATTAGGTTTGGGACACAGCTGGGCAGGAAAGGTTTCAAAGTCTAGGGGCTGCATTTTACAGAGGAGCAGATTGCTGTGTTTTTGTTTATGATGTGAACGTGACCAAATCATTTGAATCACTAAGCAGTTGGCATGAGGAGTTTCTCAAACAGGTTTGACCTTGGTTAACTCTGTTCATTTTTCAAGTGGTTTTAGCTGAATTTTATGTCTTCCGTTAACAAGTTTCTATAAATTTTGATGTTTTTCTTCTTGATGTTTTAAATTTTTTTAAATAGTTTGTTTGATATAAATTTGAATATTTATGGAGATAGCACAAAACTAAAAAGTTTTTGACATTTAGAGACTTAAAACTAAAAGGTAATGGACTTCTAGATACTTTTTATAGTTACTAACCTAAATAGATACAATCCTAAAAGTTTCGGGACAACTTTTTAATTTAATTGTTTAGAAATTCGTTTGGAGAATATATATGAAAGCTAACCTGACATATTTTGTTCTCTACTTCGCTAATATTGGTTTTTTATTCCAGAAATACATTCTAAGTTTTTCCCAAATGAAACTTCAGCTGATGTATTAGAACTTGTATAAACAGTTTAATACAGTAAAGTGAACCTGCTATTCTTTTTCATACTTCTTTTACTTATTCTCTTTGTAGCTACCTTTGATCAAATAACCATCGATTCTTTTAAAGAGAGATCTTGATCAAATAACCATCACATTCTTTTAAATAGACTAGTCAAACATGTTCTTATAATATATTTTTCTTCTCTTTTGATTTCTAATTTTCCACATTGCACTTTTCTAACGTTGGGTAGGCCGAGCCAGCCGATCCAAAAGCATTCCCCTTTCTTTTACTCGGGAACAAGATTGATGTAGACGATGGACATAGCCGAGCCGTAAGAGTTTCAAATCTTTATGTGAAACTAATAATACAGTTAATCCATGAATTATATGAATCCTTCTTGATTGCAGGTCTCAGAGAAAAGAGCAAGACAATGGTGTGATTCTAGGGGTAGCATGCCATACTTTGAGACTTCAGCAAAACAGGATTATAATGTCAATGAAGCATTTATTTGCATTGCAAAAGCTGCGTTAACCAACGAAGAAGAGCAAGAACCGTAAGTTTGAAAATTCTAATTTCCTTTATGGTTGTATCTTGCATAACATAAATATTGTTTGACCTCATTGGGCATTGAACTGTGACCTCCTAATCATTTATGGTGTCTTTCATTTTTCAACCCATCATGGTTCTTAACCCAACAAAATAGTCTAAGCATTTTAACTCTGCATATAAAAAAATCTTAGTGTTAGTAGTAAAGATAGTGAATAGGAACATATATTGGATAACGATGTTATTGCTTACATTAGATGCTTCTTTCATTTGCAGTTACTTTGAAAGTATTTCGGAGTCTGTGTCAGAGGTGGAGACAAGAGGAGGAGGTGGTTGTGCTTGTTAATATTTGTCTTCTACAAATTCAACAACCTTAACATCGACTTTTTGATTGATTTGAGCTCTCTTCCTTAATAAATATGTTTTATTCTTTGAGTTATTTATTCCATTTTATGTAAATTAGTATTTATGGTGACATTTCTCTTTTTCTTTCTTGAGAATTTCTGAAAACAATTTATTTAAGTCGGTAAAGAACAAATAAAATTCTTTGGTTAAACTTCCATTAAAAGGGA CTCACATGTCATTGCCTTTGTCAATCAATACAAACACAGACCAAATAAATGGGAAAAAAAGTAGAACACAAAAAGCAAAGGCAAAAGATATCACAACGAAGATTCAAGAACACCCACCTGAAATTTTTTTGAACTTTTTTCCACTCATCACCATCTTCAATTCCCTTTCTTCCCCGCAAACCCCTTTTCTTTCCCCCTCTTTTCTCAACAAATCCCCCCAAATTTTGCTATCTTTTCAGCTCTCTTTATGATTTACGTTTCCATTTTCTGTATCAATGGATGTTTCTGCTACCAAAAGAAGGCTCCTCAAAGTCATCTTCCTCGGTGACAGTGGAGTTGGAAAGACTTCTTTGATGAATCGATATGTGTATAAGAAGTTTAATCTACAGTATAAAGCAACAATTGGTGCTGACTTTATGACAAAGGAGCTACGGATTGATGACCAACTTGTCACATTGCAAGTTTGGGACACAGCTGGGCAGGAAAGGTTTCAAAGTCTAGGGGCTGCATTTTACAGAGGAGCAGATTGCTGTGTTTTTGTTTATGATGTGAACGTGACCAAATCATTTGAATCACTAAGCAGTTGGCATGAGGAGTTTCTCAAACAGGCCGAGCCAGCCGATCCAAAAGCATTCCCCTTTCTTTTACTCGGGAACAAGATTGATGTAGACGATGGACATAGCCGAGCCGTCTCAGAGAAAAGAGCAAGACAATGGTGTGATTCTAGGGGTAGCATGCCATACTTTGAGACTTCAGCAAAACAGGATTATAATGTCAATGAAGCATTTATTTGCATTGCAAAAGCTGCGTTAACCAACGAAGAAGAGCAAGAACCTTACTTTGAAAGTATTTCGGAGTCTGTGTCAGAGGTGGAGACAAGAGGAGGAGGTGGTTGTGCTTGTTAATATTTGTCTTCTACAAATTCAACAACCTTAACATCGACTTTTTGATTGATTTGAGCTCTCTTCCTTAATAAATATGTTTTATTCTTTGAGTTATTTATTCCATTTTATGTAAATTAGTATTTATGGTGACATTTCTCTTTTTCTTTCTTGAGAATTTCTGAAAACAATTTATTTAAGTCGGTAAAGAACAAATAAAATTCTTTGGTTAAACTTCCATTAAAAGGGA ATGGATGTTTCTGCTACCAAAAGAAGGCTCCTCAAAGTCATCTTCCTCGGTGACAGTGGAGTTGGAAAGACTTCTTTGATGAATCGATATGTGTATAAGAAGTTTAATCTACAGTATAAAGCAACAATTGGTGCTGACTTTATGACAAAGGAGCTACGGATTGATGACCAACTTGTCACATTGCAAGTTTGGGACACAGCTGGGCAGGAAAGGTTTCAAAGTCTAGGGGCTGCATTTTACAGAGGAGCAGATTGCTGTGTTTTTGTTTATGATGTGAACGTGACCAAATCATTTGAATCACTAAGCAGTTGGCATGAGGAGTTTCTCAAACAGGCCGAGCCAGCCGATCCAAAAGCATTCCCCTTTCTTTTACTCGGGAACAAGATTGATGTAGACGATGGACATAGCCGAGCCGTCTCAGAGAAAAGAGCAAGACAATGGTGTGATTCTAGGGGTAGCATGCCATACTTTGAGACTTCAGCAAAACAGGATTATAATGTCAATGAAGCATTTATTTGCATTGCAAAAGCTGCGTTAACCAACGAAGAAGAGCAAGAACCTTACTTTGAAAGTATTTCGGAGTCTGTGTCAGAGGTGGAGACAAGAGGAGGAGGTGGTTGTGCTTGTTAA MDVSATKRRLLKVIFLGDSGVGKTSLMNRYVYKKFNLQYKATIGADFMTKELRIDDQLVTLQVWDTAGQERFQSLGAAFYRGADCCVFVYDVNVTKSFESLSSWHEEFLKQAEPADPKAFPFLLLGNKIDVDDGHSRAVSEKRARQWCDSRGSMPYFETSAKQDYNVNEAFICIAKAALTNEEEQEPYFESISESVSEVETRGGGGCAC* Homology
BLAST of CSPI02G15180 vs. ExPASy Swiss-Prot
Match: Q43463 (Ras-related protein Rab7 OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 318.9 bits (816), Expect = 4.2e-86 Identity = 152/208 (73.08%), Postives = 180/208 (86.54%), Query Frame = 0
BLAST of CSPI02G15180 vs. ExPASy Swiss-Prot
Match: Q41640 (Ras-related protein Rab7 OS=Vigna aconitifolia OX=3918 PE=2 SV=1) HSP 1 Score: 314.7 bits (805), Expect = 7.9e-85 Identity = 149/208 (71.63%), Postives = 179/208 (86.06%), Query Frame = 0
BLAST of CSPI02G15180 vs. ExPASy Swiss-Prot
Match: Q948K8 (Ras-related protein RABG3a OS=Arabidopsis thaliana OX=3702 GN=RABG3A PE=2 SV=1) HSP 1 Score: 314.7 bits (805), Expect = 7.9e-85 Identity = 149/206 (72.33%), Postives = 179/206 (86.89%), Query Frame = 0
BLAST of CSPI02G15180 vs. ExPASy Swiss-Prot
Match: O04157 (Ras-related protein RABG3b OS=Arabidopsis thaliana OX=3702 GN=RABG3B PE=1 SV=1) HSP 1 Score: 301.2 bits (770), Expect = 9.1e-81 Identity = 142/207 (68.60%), Postives = 170/207 (82.13%), Query Frame = 0
BLAST of CSPI02G15180 vs. ExPASy Swiss-Prot
Match: Q9SJ11 (Ras-related protein RABG2 OS=Arabidopsis thaliana OX=3702 GN=RABG2 PE=2 SV=2) HSP 1 Score: 287.0 bits (733), Expect = 1.8e-76 Identity = 138/213 (64.79%), Postives = 169/213 (79.34%), Query Frame = 0
BLAST of CSPI02G15180 vs. ExPASy TrEMBL
Match: A0A0A0LJP3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G297190 PE=4 SV=1) HSP 1 Score: 428.3 bits (1100), Expect = 1.8e-116 Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0
BLAST of CSPI02G15180 vs. ExPASy TrEMBL
Match: A0A5A7TRX1 (Ras-related protein Rab7-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G004360 PE=4 SV=1) HSP 1 Score: 408.7 bits (1049), Expect = 1.5e-110 Identity = 199/210 (94.76%), Postives = 206/210 (98.10%), Query Frame = 0
BLAST of CSPI02G15180 vs. ExPASy TrEMBL
Match: A0A1S3C6L0 (ras-related protein Rab7-like OS=Cucumis melo OX=3656 GN=LOC103497479 PE=4 SV=1) HSP 1 Score: 408.7 bits (1049), Expect = 1.5e-110 Identity = 199/210 (94.76%), Postives = 206/210 (98.10%), Query Frame = 0
BLAST of CSPI02G15180 vs. ExPASy TrEMBL
Match: A0A6J1EJ13 (ras-related protein RABG3a-like OS=Cucurbita moschata OX=3662 GN=LOC111434893 PE=4 SV=1) HSP 1 Score: 389.0 bits (998), Expect = 1.2e-104 Identity = 193/215 (89.77%), Postives = 202/215 (93.95%), Query Frame = 0
BLAST of CSPI02G15180 vs. ExPASy TrEMBL
Match: A0A6J1I7U4 (ras-related protein RABG3a-like OS=Cucurbita maxima OX=3661 GN=LOC111470406 PE=4 SV=1) HSP 1 Score: 387.1 bits (993), Expect = 4.6e-104 Identity = 190/206 (92.23%), Postives = 199/206 (96.60%), Query Frame = 0
BLAST of CSPI02G15180 vs. NCBI nr
Match: XP_004148452.1 (ras-related protein Rab7 [Cucumis sativus] >KGN62095.1 hypothetical protein Csa_006164 [Cucumis sativus]) HSP 1 Score: 428.3 bits (1100), Expect = 3.8e-116 Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0
BLAST of CSPI02G15180 vs. NCBI nr
Match: XP_008457907.1 (PREDICTED: ras-related protein Rab7-like [Cucumis melo] >KAA0045900.1 ras-related protein Rab7-like [Cucumis melo var. makuwa]) HSP 1 Score: 408.7 bits (1049), Expect = 3.1e-110 Identity = 199/210 (94.76%), Postives = 206/210 (98.10%), Query Frame = 0
BLAST of CSPI02G15180 vs. NCBI nr
Match: XP_038900623.1 (ras-related protein Rab7-like [Benincasa hispida]) HSP 1 Score: 407.9 bits (1047), Expect = 5.2e-110 Identity = 198/209 (94.74%), Postives = 205/209 (98.09%), Query Frame = 0
BLAST of CSPI02G15180 vs. NCBI nr
Match: XP_023512042.1 (ras-related protein Rab7-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 390.6 bits (1002), Expect = 8.7e-105 Identity = 193/215 (89.77%), Postives = 203/215 (94.42%), Query Frame = 0
BLAST of CSPI02G15180 vs. NCBI nr
Match: KAG6571380.1 (Ras-related protein RABG3a, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 389.4 bits (999), Expect = 1.9e-104 Identity = 193/215 (89.77%), Postives = 203/215 (94.42%), Query Frame = 0
BLAST of CSPI02G15180 vs. TAIR 10
Match: AT4G09720.1 (RAB GTPase homolog G3A ) HSP 1 Score: 314.7 bits (805), Expect = 5.6e-86 Identity = 149/206 (72.33%), Postives = 179/206 (86.89%), Query Frame = 0
BLAST of CSPI02G15180 vs. TAIR 10
Match: AT4G09720.4 (RAB GTPase homolog G3A ) HSP 1 Score: 307.4 bits (786), Expect = 9.0e-84 Identity = 149/211 (70.62%), Postives = 179/211 (84.83%), Query Frame = 0
BLAST of CSPI02G15180 vs. TAIR 10
Match: AT4G09720.3 (RAB GTPase homolog G3A ) HSP 1 Score: 306.2 bits (783), Expect = 2.0e-83 Identity = 149/217 (68.66%), Postives = 179/217 (82.49%), Query Frame = 0
BLAST of CSPI02G15180 vs. TAIR 10
Match: AT1G22740.1 (RAB GTPase homolog G3B ) HSP 1 Score: 301.2 bits (770), Expect = 6.4e-82 Identity = 142/207 (68.60%), Postives = 170/207 (82.13%), Query Frame = 0
BLAST of CSPI02G15180 vs. TAIR 10
Match: AT2G21880.1 (RAB GTPase homolog 7A ) HSP 1 Score: 287.0 bits (733), Expect = 1.3e-77 Identity = 138/213 (64.79%), Postives = 169/213 (79.34%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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