CSPI02G14220 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAACGAACCTTTAAAATTAGGTTTTCTTCCTCTTTGCCTTTGGTTAACTTCAATTTCCCTCAGAGACCCAAAAACCCTAATCAATCACAATGAAGTACAACCCTAGAGTCTCCAGCTCCCGCCGTAAGAATCGCAAGGCACACTTCTCCGCGCCGTCCAGCGTACGGCGGATTTTGATGAGTGCGACCCTCTCCGGCGACCTTCGTTCTAAGTACAATGTCCGCTCCATGCCGATCCGGAAGGACGACGAAGTTCAGGTCTTGAGAGGAACGTACAAAGGCCGTGAAGGTAAGGTCGTACAGGTCTACCGTCGCAAGTGGATCATTCATATTGAGCGCATCACTAGAGAGAAAGTGAATGGCTCCACTGTTAATGTTGGAATTAAGCCGTCGAAGGTTATGATTACGAAGCTCAAGTTGGATAAGGATAGGAAGTCGTTGCTTGATCGTAAGGCTAAGGGTCGTGCTTCTGCAGATAAGGATAAGGGTACTAAATTCACTGCTGAGGATATTATGCAAAGCGTCGACTAATTTTAATCTGGTGAAAATTTTTGAAATTTCCTCTTAGTTTTAGTTCTTACCCTGTTTTTATTTGCTTTCAAACTTGAGGTTTTGTCTTTGTTTGTTCTGGAATGAGGAGACAATGTTTTATTGTTTTTTTAATTTTGATGCTTCGAGTTCTGCCTTTGCTCTCAATACCTGGATTTTTTTGTTATTTTTCAATGCAATATCATAAGATTCCTTTCTTCATATCTCTGTTCTTGTCCTTTGAATGAAGAATTGATCTTGATTTAGTTTCTGGTCGACAGGCATTGTTGTTGATTGACATAAAGC AAACGAACCTTTAAAATTAGGTTTTCTTCCTCTTTGCCTTTGGTTAACTTCAATTTCCCTCAGAGACCCAAAAACCCTAATCAATCACAATGAAGTACAACCCTAGAGTCTCCAGCTCCCGCCGTAAGAATCGCAAGGCACACTTCTCCGCGCCGTCCAGCGTACGGCGGATTTTGATGAGTGCGACCCTCTCCGGCGACCTTCGTTCTAAGTACAATGTCCGCTCCATGCCGATCCGGAAGGACGACGAAGTTCAGGTCTTGAGAGGAACGTACAAAGGCCGTGAAGGTAAGGTCGTACAGGTCTACCGTCGCAAGTGGATCATTCATATTGAGCGCATCACTAGAGAGAAAGTGAATGGCTCCACTGTTAATGTTGGAATTAAGCCGTCGAAGGTTATGATTACGAAGCTCAAGTTGGATAAGGATAGGAAGTCGTTGCTTGATCGTAAGGCTAAGGGTCGTGCTTCTGCAGATAAGGATAAGGGTACTAAATTCACTGCTGAGGATATTATGCAAAGCGTCGACTAATTTTAATCTGGTGAAAATTTTTGAAATTTCCTCTTAGTTTTAGTTCTTACCCTGTTTTTATTTGCTTTCAAACTTGAGGTTTTGTCTTTGTTTGTTCTGGAATGAGGAGACAATGTTTTATTGTTTTTTTAATTTTGATGCTTCGAGTTCTGCCTTTGCTCTCAATACCTGGATTTTTTTGTTATTTTTCAATGCAATATCATAAGATTCCTTTCTTCATATCTCTGTTCTTGTCCTTTGAATGAAGAATTGATCTTGATTTAGTTTCTGGTCGACAGGCATTGTTGTTGATTGACATAAAGC ATGAAGTACAACCCTAGAGTCTCCAGCTCCCGCCGTAAGAATCGCAAGGCACACTTCTCCGCGCCGTCCAGCGTACGGCGGATTTTGATGAGTGCGACCCTCTCCGGCGACCTTCGTTCTAAGTACAATGTCCGCTCCATGCCGATCCGGAAGGACGACGAAGTTCAGGTCTTGAGAGGAACGTACAAAGGCCGTGAAGGTAAGGTCGTACAGGTCTACCGTCGCAAGTGGATCATTCATATTGAGCGCATCACTAGAGAGAAAGTGAATGGCTCCACTGTTAATGTTGGAATTAAGCCGTCGAAGGTTATGATTACGAAGCTCAAGTTGGATAAGGATAGGAAGTCGTTGCTTGATCGTAAGGCTAAGGGTCGTGCTTCTGCAGATAAGGATAAGGGTACTAAATTCACTGCTGAGGATATTATGCAAAGCGTCGACTAA MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSATLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKPSKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD* Homology
BLAST of CSPI02G14220 vs. ExPASy Swiss-Prot
Match: P51414 (60S ribosomal protein L26-1 OS=Arabidopsis thaliana OX=3702 GN=RPL26A PE=2 SV=2) HSP 1 Score: 247.7 bits (631), Expect = 8.3e-65 Identity = 123/146 (84.25%), Postives = 141/146 (96.58%), Query Frame = 0
BLAST of CSPI02G14220 vs. ExPASy Swiss-Prot
Match: Q9FJX2 (60S ribosomal protein L26-2 OS=Arabidopsis thaliana OX=3702 GN=RPL26B PE=2 SV=1) HSP 1 Score: 243.0 bits (619), Expect = 2.1e-63 Identity = 121/146 (82.88%), Postives = 140/146 (95.89%), Query Frame = 0
BLAST of CSPI02G14220 vs. ExPASy Swiss-Prot
Match: Q39411 (60S ribosomal protein L26 OS=Brassica campestris OX=3711 GN=RPL26 PE=2 SV=1) HSP 1 Score: 229.6 bits (584), Expect = 2.3e-59 Identity = 114/145 (78.62%), Postives = 134/145 (92.41%), Query Frame = 0
BLAST of CSPI02G14220 vs. ExPASy Swiss-Prot
Match: P12749 (60S ribosomal protein L26 OS=Rattus norvegicus OX=10116 GN=Rpl26 PE=1 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 1.1e-43 Identity = 95/142 (66.90%), Postives = 119/142 (83.80%), Query Frame = 0
BLAST of CSPI02G14220 vs. ExPASy Swiss-Prot
Match: P61257 (60S ribosomal protein L26 OS=Bos taurus OX=9913 GN=RPL26 PE=2 SV=1) HSP 1 Score: 176.4 bits (446), Expect = 2.4e-43 Identity = 95/142 (66.90%), Postives = 118/142 (83.10%), Query Frame = 0
BLAST of CSPI02G14220 vs. ExPASy TrEMBL
Match: A0A0A0LJI3 (KOW domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G285350 PE=3 SV=1) HSP 1 Score: 278.9 bits (712), Expect = 1.2e-71 Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0
BLAST of CSPI02G14220 vs. ExPASy TrEMBL
Match: A0A5A7TS06 (60S ribosomal protein L26-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G00090 PE=3 SV=1) HSP 1 Score: 276.6 bits (706), Expect = 6.2e-71 Identity = 145/146 (99.32%), Postives = 145/146 (99.32%), Query Frame = 0
BLAST of CSPI02G14220 vs. ExPASy TrEMBL
Match: A0A1S3C7Q4 (60S ribosomal protein L26-1-like OS=Cucumis melo OX=3656 GN=LOC103497426 PE=3 SV=1) HSP 1 Score: 276.6 bits (706), Expect = 6.2e-71 Identity = 145/146 (99.32%), Postives = 145/146 (99.32%), Query Frame = 0
BLAST of CSPI02G14220 vs. ExPASy TrEMBL
Match: A0A6J1D6T1 (60S ribosomal protein L26-1-like OS=Momordica charantia OX=3673 GN=LOC111017871 PE=3 SV=1) HSP 1 Score: 272.7 bits (696), Expect = 8.9e-70 Identity = 141/146 (96.58%), Postives = 144/146 (98.63%), Query Frame = 0
BLAST of CSPI02G14220 vs. ExPASy TrEMBL
Match: A0A6J1L4P7 (60S ribosomal protein L26-1-like OS=Cucurbita maxima OX=3661 GN=LOC111499871 PE=3 SV=1) HSP 1 Score: 271.2 bits (692), Expect = 2.6e-69 Identity = 139/146 (95.21%), Postives = 144/146 (98.63%), Query Frame = 0
BLAST of CSPI02G14220 vs. NCBI nr
Match: XP_004148028.1 (60S ribosomal protein L26-1 [Cucumis sativus] >KGN62000.1 hypothetical protein Csa_006447 [Cucumis sativus]) HSP 1 Score: 278.9 bits (712), Expect = 2.6e-71 Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0
BLAST of CSPI02G14220 vs. NCBI nr
Match: XP_008457837.1 (PREDICTED: 60S ribosomal protein L26-1-like [Cucumis melo] >XP_038900627.1 60S ribosomal protein L26-1-like [Benincasa hispida] >KAA0045834.1 60S ribosomal protein L26-1-like [Cucumis melo var. makuwa] >TYJ99449.1 60S ribosomal protein L26-1-like [Cucumis melo var. makuwa]) HSP 1 Score: 276.6 bits (706), Expect = 1.3e-70 Identity = 145/146 (99.32%), Postives = 145/146 (99.32%), Query Frame = 0
BLAST of CSPI02G14220 vs. NCBI nr
Match: XP_022149443.1 (60S ribosomal protein L26-1-like [Momordica charantia]) HSP 1 Score: 272.7 bits (696), Expect = 1.8e-69 Identity = 141/146 (96.58%), Postives = 144/146 (98.63%), Query Frame = 0
BLAST of CSPI02G14220 vs. NCBI nr
Match: XP_022948229.1 (60S ribosomal protein L26-1-like [Cucurbita moschata] >XP_023007349.1 60S ribosomal protein L26-1-like [Cucurbita maxima] >XP_023532418.1 60S ribosomal protein L26-1-like [Cucurbita pepo subsp. pepo] >KAG6605230.1 60S ribosomal protein L26-1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035196.1 60S ribosomal protein L26-1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 271.2 bits (692), Expect = 5.4e-69 Identity = 139/146 (95.21%), Postives = 144/146 (98.63%), Query Frame = 0
BLAST of CSPI02G14220 vs. NCBI nr
Match: XP_022931741.1 (60S ribosomal protein L26-1-like [Cucurbita moschata] >XP_022973193.1 60S ribosomal protein L26-1-like [Cucurbita maxima] >XP_023521000.1 60S ribosomal protein L26-1-like [Cucurbita pepo subsp. pepo] >KAG6571308.1 60S ribosomal protein L26-1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019317.1 60S ribosomal protein L26-1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 270.8 bits (691), Expect = 7.0e-69 Identity = 141/146 (96.58%), Postives = 144/146 (98.63%), Query Frame = 0
BLAST of CSPI02G14220 vs. TAIR 10
Match: AT3G49910.1 (Translation protein SH3-like family protein ) HSP 1 Score: 247.7 bits (631), Expect = 5.9e-66 Identity = 123/146 (84.25%), Postives = 141/146 (96.58%), Query Frame = 0
BLAST of CSPI02G14220 vs. TAIR 10
Match: AT5G67510.1 (Translation protein SH3-like family protein ) HSP 1 Score: 243.0 bits (619), Expect = 1.5e-64 Identity = 121/146 (82.88%), Postives = 140/146 (95.89%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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